Rh7CG217300

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Forward (+)
19797405 .. 19806078
8674 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG217300.1

Sequence Viewer

Length: 2598 bp
ATGGAGATTCTTGCTGCAATTGCCGGAAAACTTGCCGAGTTCACAGTTGCACCAATTGGACGTCAAGTGGGTTATCTAGCTCACCACAAAAGCAACCATCAAAATCTGCAGACCAAATTGGAGGACTTAAGTGCTGCCAGGGATGAGGTTCAACATAAGGTTGATCAATTTAGGAGAGGAGGTAAACGAATCGAGACTACTGTTCTGAACTGGAAGACAAGAGTGGATGCAATCATCACAGAGTCAGAGGAATTCCTGAGAGACGGCCGCCATGCACAGACCGAGTGTCTTCATGGTTTTTGTCCGCATTTGGTGCTCCGTTATCAACTAAGCAGGAAGTCAGCAAAATTGGTGGAGAAGATTAATGAACTTTATGGAAAGAAGGAGTTCTCCAACTTTGCATATGATGTTCTTCCACAAGATTTATGTCTTTTATCTACCAGGCATTACAGTACATTCGATTCAAGGAATTCAGTTGTTTTGAGAGTCATGGATGAACTGAGAAATCCTAATACAGAAATGATTCTGGTGTGGGGAATCGGTGGGGTAGGGAAGACCACACTCGTTGAAGAAGTTCTTAGGCAAGCTAAGGATGTTAACTTATTTGATGATTTGGTGATGGTGAGAGCTGTGAAAGAGTACTCAGACCTTGAAAAAATTCAGAAAGAAATTGCCATGAAGTTGGGTATGAGCATTGACAAAGATCAGACTCTAGCTGAAAGAGCGCTCCTTCTAGGTCGTAGGATAAAAGAAAAAAGGACTCTTGTAGTTTTGGATGACGTTTGGGAAAAAATTGATCTGGTGGCTGTCGGACTTCCCTGCTTGGTTACTTTTAAAGTAGTGTTGACATGTAGAAGCCGAAAGGAGTTATCATTGGATATGCGTACACAAAAAGATATTTTGGTTGATGTTTTAAATGAAGAGGAAGCATGGAGTTTATTTGAGAAGATGGCTGGCTATGTTGTTAAAGATAGCCGCATACAAAGCATAGCAATTGAAGTAGCAAAAAACTGTGGAGGTTTGCCGGTCTTGATTGTTACGGTTGCAAGAGCTCTAAAAGACAGGAACAATATTCGTGCATGGAGAGACACCTTGAGACGGCTTGGAGGCTTTGACAACAAAGAATTTACAGAAAAAGCATACTTGGCTCTGGAGTGGAGTTACGATCAATTGGAAGATAAAGAGCTTAAACCGTTGTTCTTGCTTTGTGGGATTATTGCAGTTAAGAACCATATTTATTTGGCAGACCTGTTGAAATATAGTTTTGTTTTGGGTTTGATAAAAAATGTCTATACAATAGAAGAAGCACGAGATGCATTAGATCCACTGGTTGAAAAGCTTAAAGATTCTTGCTTGTTGCGGGATAGTGATATCAATATGCATGTTAGAATGCATGATCTTGTATGTGAGGTTGCCATACGGATTGCATCCAGAGATCAACATGTCTTATCAATTGGATATGGAAGTGAACTAAAAGAATGGCCTGATAAAGATTTCTTTGAAAGGTGCAGTAAGATGTCTTTAAAATCCAGCAATATTCCCATGCTTTCTGAAGTACCATGGAAATGCCCGAAACTTGAGATGTTTTATTTGTATAAAGAACAACTGAGTGCTGCACCGTTGGAATTCCCTTCCAACTTCTTTAGTGAAATGGAGAAACTGAAAGTGTTGGGTTTAACTGAAGCGTATATGGTGTCACTTCCCCCATCTCTTCAGCTCTTGAAGAATCTTCAGACGTTGTGTTTAAAAGACTGTTGGTTGCATGAGGTAGCTCTACTTGGACATCTAAGCAACTTAGAGATTCTTAGCTTTGCGAGGTCCAACATTAAACGGCTACCCAAAGAAATAGGGCACTTGATTCGATTGAGATGGTTGGATTTGAGTGATTGTGCCAAACTTAAAGTGATTTCACCTGGTGTTATTTCAAGGTTGGAAAGACTAGAAGACTTATCACTGAGAAACGTCTTTCTCAAATGGGAGGCTGAAAGGGGAGGAAGTAATGCTAGTCTTTTAGAGCTAAAAGACTTGACTCAACTAACTGCATTGGAGATATATATTGAAGATGCAAATATTCTTCCATCAAACTTGTTCTCCCGTAAGTTGGTAAGATACCAAATATATATTGGCGATGTTTGGGAACGCCATAATGAAAAAAAGAAGAGTATGGCTGAAACGACCCTCAACACGCTAAAACTGAAGCTCGCTCCCAGCAATGAATTGGACCACGGTATAAAAACATTGTTGAAGAGATCTGAAGATGTCATTTTGGATGGATCAAAGAGTGTTAATACAATAATAGATGTTGAAGATTTTCAGCAACTGATACACCTCCGTCTCCAAAACAATGTTGATTTCACCTATATCAGTAATAGGAAGGTAGAAATTAGCCACACATTAAATCTCGCAATGTATGGTAGAAATCAGCCACACATTAAATCTCGCAATACGGACAAAGGCGTTTCAAGATCCCCAGGGATTCCATTGAAGGTTCTTCACTCCAACAATAAACTGCCTCACTTCGAGAGGGCGTTATATTCACATCTTATGCTTGTCAAATTGGGATTGTGGGCTCTCTCTCTTGTTTTCAAGCCAAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

865

Amino Acids

99.21

Weight (kDa)

8.57

Isoelectric Point (pI)

44.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 160 - 318 1.6e-25 NB-ARC domain
LRR_14 PF23598 593 - 689 3.4e-09 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 64
AciI CCGC 4 cut(s) 268, 305, 976, 1360
AclWI GGATC 3 cut(s) 1316, 2281, 2460
AcoI YGGCCR 1 cut(s) 265
AcsI RAATTY 5 cut(s) 251, 469, 657, 1124, 1625
AcuI CTGAAG 6 cut(s) 1572, 1697, 1701, 1715, 2216, 2274
AcyI GRCGYC 1 cut(s) 61
AdeI CACNNNGTG 1 cut(s) 1916
AfaI GTAC 4 cut(s) 454, 641, 886, 1557
AfeI AGCGCT 1 cut(s) 726
AfiI CCNNNNNNNGG 2 cut(s) 1098, 2101
AflII CTTAAG 1 cut(s) 127
AflIII ACRYGT 2 cut(s) 848, 1441
AhdI GACNNNNNGTC 1 cut(s) 285
AjnI CCWGG 4 cut(s) 137, 440, 1912, 2470
Alw21I GWGCWC 2 cut(s) 318, 1054
Alw26I GTCTC 5 cut(s) 188, 255, 1080, 1090, 2339
AlwI GGATC 3 cut(s) 1316, 2281, 2460
AlwNI CAGNNNCTG 1 cut(s) 2320
Aor51HI AGCGCT 1 cut(s) 726
AoxI GGCC 2 cut(s) 265, 1481
ApeKI GCWGC 3 cut(s) 14, 134, 1613
ApoI RAATTY 5 cut(s) 251, 469, 657, 1124, 1625
AseI ATTAAT 1 cut(s) 363
Asp700I GAANNNNTTC 5 cut(s) 386, 522, 573, 657, 2310
AspLEI GCGC 1 cut(s) 727
AspS9I GGNCC 2 cut(s) 1818, 2221
AsuHPI GGTGA 5 cut(s) 74, 628, 634, 1902, 2347
AvaII GGWCC 2 cut(s) 1818, 2221
BaeGI GKGCMC 1 cut(s) 1854
BanII GRGCYC 2 cut(s) 1054, 2572
BauI CACGAG 1 cut(s) 1308
BbsI GAAGAC 4 cut(s) 221, 281, 560, 1950
Bbv12I GWGCWC 2 cut(s) 318, 1054
BbvI GCAGC 2 cut(s) 121, 1600
BccI CCATC 7 cut(s) 105, 613, 943, 1714, 1863, 2086, 2264
BceAI ACGGC 3 cut(s) 280, 1115, 1847
BcgI CGANNNNNNTGC 2 cut(s) 1841, 1875
BciT130I CCWGG 4 cut(s) 139, 442, 1914, 2472
BclI TGATCA 1 cut(s) 163
BcoDI GTCTC 5 cut(s) 188, 255, 1080, 1090, 2339
BfaI CTAG 5 cut(s) 77, 713, 734, 1940, 2004
BfmI CTRYAG 1 cut(s) 107
BfoI RGCGCY 1 cut(s) 728
BfrI CTTAAG 1 cut(s) 127
BglII AGATCT 1 cut(s) 2249
BisI GCNGC 5 cut(s) 15, 135, 268, 976, 1614
BlsI GCNGC 5 cut(s) 16, 136, 269, 977, 1615
BmcAI AGTACT 1 cut(s) 641
Bme1390I CCNGG 4 cut(s) 139, 442, 1914, 2472
Bme18I GGWCC 2 cut(s) 1818, 2221
BmeRI GACNNNNNGTC 1 cut(s) 285
BmgT120I GGNCC 2 cut(s) 1818, 2221
BmrFI CCNGG 4 cut(s) 139, 442, 1914, 2472
BmsI GCATC 4 cut(s) 217, 1303, 1436, 2053
BpiI GAAGAC 4 cut(s) 221, 281, 560, 1950
BpmI CTGGAG 1 cut(s) 1172
Bpu10I CCTNAGC 1 cut(s) 588
BpuEI CTTGAG 2 cut(s) 1114, 1598
BsaHI GRCGYC 1 cut(s) 61
BsaJI CCNNGG 5 cut(s) 138, 1559, 2224, 2470, 2471
BsaXI ACNNNNNCTCC 4 cut(s) 166, 196, 2075, 2105
Bsc4I CCNNNNNNNGG 2 cut(s) 1098, 2101
Bse118I RCCGGY 1 cut(s) 1024
Bse1I ACTGG 2 cut(s) 215, 1332
Bse3DI GCAATG 2 cut(s) 2218, 2412
BseBI CCWGG 4 cut(s) 139, 442, 1914, 2472
BseDI CCNNGG 5 cut(s) 138, 1559, 2224, 2470, 2471
BseGI GGATG 7 cut(s) 148, 232, 499, 598, 781, 1427, 2275
BseLI CCNNNNNNNGG 2 cut(s) 1098, 2101
BseMI GCAATG 2 cut(s) 2218, 2412
BseMII CTCAG 5 cut(s) 248, 491, 657, 1598, 1946
BseNI ACTGG 2 cut(s) 215, 1332
BseRI GAGGAG 1 cut(s) 192
BseSI GKGCMC 1 cut(s) 1854
BseX3I CGGCCG 1 cut(s) 265
BseXI GCAGC 2 cut(s) 121, 1600
BseYI CCCAGC 1 cut(s) 2207
BsgI GTGCAG 2 cut(s) 1528, 1599
Bsh1285I CGRYCG 1 cut(s) 268
BshFI GGCC 2 cut(s) 267, 1483
BsiEI CGRYCG 1 cut(s) 268
BsiHKAI GWGCWC 2 cut(s) 318, 1054
BsiSI CCGG 2 cut(s) 24, 1025
BslI CCNNNNNNNGG 2 cut(s) 1098, 2101
BsmAI GTCTC 5 cut(s) 188, 255, 1080, 1090, 2339
BsmBI CGTCTC 3 cut(s) 255, 1090, 2339
BsmI GAATGC 1 cut(s) 1395
BsnI GGCC 2 cut(s) 267, 1483
Bsp1286I GDGCHC 4 cut(s) 318, 1054, 1854, 2572
Bsp19I CCATGG 1 cut(s) 1559
BspACI CCGC 4 cut(s) 268, 305, 976, 1360
BspANI GGCC 2 cut(s) 267, 1483
BspCNI CTCAG 5 cut(s) 249, 492, 656, 1599, 1947
BspMAI CTGCAG 1 cut(s) 111
BspPI GGATC 3 cut(s) 1316, 2281, 2460
BspTI CTTAAG 1 cut(s) 127
BsrDI GCAATG 2 cut(s) 2218, 2412
BsrFI RCCGGY 1 cut(s) 1024
BsrI ACTGG 2 cut(s) 215, 1332
BssAI RCCGGY 1 cut(s) 1024
BssECI CCNNGG 5 cut(s) 138, 1559, 2224, 2470, 2471
BssNI GRCGYC 1 cut(s) 61
BssSI CACGAG 1 cut(s) 1308
BssT1I CCWWGG 1 cut(s) 1559
Bst2BI CACGAG 1 cut(s) 1308
Bst2UI CCWGG 4 cut(s) 139, 442, 1914, 2472
Bst4CI ACNGT 9 cut(s) 46, 202, 452, 1013, 1042, 1194, 1620, 1754, 2228
Bst6I CTCTTC 4 cut(s) 915, 1716, 2153, 2240
BstACI GRCGYC 1 cut(s) 61
BstAFI CTTAAG 1 cut(s) 127
BstAPI GCANNNNNTGC 2 cut(s) 313, 1313
BstC8I GCNNGC 3 cut(s) 585, 955, 2202
BstDSI CCRYGG 2 cut(s) 1559, 2224
BstF5I GGATG 7 cut(s) 148, 232, 499, 598, 781, 1427, 2275
BstH2I RGCGCY 1 cut(s) 728
BstHHI GCGC 1 cut(s) 727
BstMAI GTCTC 5 cut(s) 188, 255, 1080, 1090, 2339
BstMCI CGRYCG 1 cut(s) 268
BstMWI GCNNNNNNNGC 6 cut(s) 20, 313, 722, 984, 1145, 1313
BstNI CCWGG 4 cut(s) 139, 442, 1914, 2472
BstNSI RCATGY 3 cut(s) 852, 1385, 1445
BstSCI CCNGG 4 cut(s) 137, 440, 1912, 2470
BstSFI CTRYAG 1 cut(s) 107
BstSLI GKGCMC 1 cut(s) 1854
BstV1I GCAGC 2 cut(s) 121, 1600
BstV2I GAAGAC 4 cut(s) 221, 281, 560, 1950
BstX2I RGATCY 3 cut(s) 1321, 2249, 2465
BstXI CCANNNNNNTGG 1 cut(s) 682
BstYI RGATCY 3 cut(s) 1321, 2249, 2465
BstZI CGGCCG 1 cut(s) 265
BsuRI GGCC 2 cut(s) 267, 1483
BtgI CCRYGG 2 cut(s) 1559, 2224
BtgZI GCGATG 1 cut(s) 2142
BtsCI GGATG 7 cut(s) 148, 232, 499, 598, 781, 1427, 2275
BtsIMutI CAGTG 2 cut(s) 1325, 1952
Cac8I GCNNGC 3 cut(s) 585, 955, 2202
CaiI CAGNNNCTG 1 cut(s) 2320
CfoI GCGC 1 cut(s) 727
Cfr10I RCCGGY 1 cut(s) 1024
Cfr13I GGNCC 2 cut(s) 1818, 2221
CsiI ACCWGGT 1 cut(s) 1912
Csp6I GTAC 4 cut(s) 453, 640, 885, 1556
CspCI CAANNNNNGTGG 4 cut(s) 333, 368, 547, 582
CviQI GTAC 4 cut(s) 453, 640, 885, 1556
DraI TTTAAA 4 cut(s) 835, 915, 1524, 1746
DraIII CACNNNGTG 1 cut(s) 1916
DriI GACNNNNNGTC 1 cut(s) 285
EaeI YGGCCR 1 cut(s) 265
EagI CGGCCG 1 cut(s) 265
Eam1104I CTCTTC 4 cut(s) 915, 1716, 2153, 2240
Eam1105I GACNNNNNGTC 1 cut(s) 285
EarI CTCTTC 4 cut(s) 915, 1716, 2153, 2240
Ecl136II GAGCTC 1 cut(s) 1052
EclXI CGGCCG 1 cut(s) 265
Eco130I CCWWGG 1 cut(s) 1559
Eco24I GRGCYC 2 cut(s) 1054, 2572
Eco32I GATATC 1 cut(s) 1372
Eco47I GGWCC 2 cut(s) 1818, 2221
Eco47III AGCGCT 1 cut(s) 726
Eco52I CGGCCG 1 cut(s) 265
Eco53kI GAGCTC 1 cut(s) 1052
Eco57I CTGAAG 6 cut(s) 1572, 1697, 1701, 1715, 2216, 2274
EcoICRI GAGCTC 1 cut(s) 1052
EcoRI GAATTC 3 cut(s) 251, 469, 1625
EcoRII CCWGG 4 cut(s) 137, 440, 1912, 2470
EcoRV GATATC 1 cut(s) 1372
EcoT14I CCWWGG 1 cut(s) 1559
EcoT22I ATGCAT 3 cut(s) 1318, 1383, 1395
EcoT38I GRGCYC 2 cut(s) 1054, 2572
ErhI CCWWGG 1 cut(s) 1559
Esp3I CGTCTC 3 cut(s) 255, 1090, 2339
FalI AAGNNNNNCTT 2 cut(s) 561, 593
FauI CCCGC 1 cut(s) 1353
FauNDI CATATG 1 cut(s) 403
FbaI TGATCA 1 cut(s) 163
Fnu4HI GCNGC 5 cut(s) 15, 135, 268, 976, 1614
FokI GGATG 7 cut(s) 155, 239, 506, 605, 788, 1414, 2282
FriOI GRGCYC 2 cut(s) 1054, 2572
Fsp4HI GCNGC 5 cut(s) 15, 135, 268, 976, 1614
FspBI CTAG 5 cut(s) 77, 713, 734, 1940, 2004
GlaI GCGC 1 cut(s) 726
GluI GCNGC 5 cut(s) 15, 135, 268, 976, 1614
GsaI CCCAGC 1 cut(s) 2211
GsuI CTGGAG 1 cut(s) 1172
HaeII RGCGCY 1 cut(s) 728
HaeIII GGCC 2 cut(s) 267, 1483
HapII CCGG 2 cut(s) 24, 1025
HhaI GCGC 1 cut(s) 727
Hin1I GRCGYC 1 cut(s) 61
Hin6I GCGC 1 cut(s) 725
HinP1I GCGC 1 cut(s) 725
HincII GTYRAC 2 cut(s) 598, 846
HindII GTYRAC 2 cut(s) 598, 846
HindIII AAGCTT 1 cut(s) 1337
HpaI GTTAAC 1 cut(s) 598
HpaII CCGG 2 cut(s) 24, 1025
HphI GGTGA 5 cut(s) 74, 628, 634, 1902, 2347
Hpy166II GTNNAC 6 cut(s) 42, 185, 598, 846, 887, 1469
Hpy188I TCNGA 9 cut(s) 207, 247, 646, 663, 708, 812, 1552, 1734, 2254
Hpy188III TCNNGA 8 cut(s) 193, 256, 1030, 1151, 1431, 1720, 2463, 2521
Hpy8I GTNNAC 6 cut(s) 42, 185, 598, 846, 887, 1469
HpyAV CCTTC 5 cut(s) 376, 740, 1641, 2368, 2479
HpyCH4III ACNGT 9 cut(s) 46, 202, 452, 1013, 1042, 1194, 1620, 1754, 2228
HpyCH4IV ACGT 4 cut(s) 61, 780, 1736, 1962
HpyF10VI GCNNNNNNNGC 6 cut(s) 20, 313, 722, 984, 1145, 1313
HpySE526I ACGT 4 cut(s) 61, 780, 1736, 1962
Hsp92I GRCGYC 1 cut(s) 61
HspAI GCGC 1 cut(s) 725
Ksp22I TGATCA 1 cut(s) 163
KspAI GTTAAC 1 cut(s) 598
LmnI GCTCC 3 cut(s) 321, 732, 2209
Lsp1109I GCAGC 2 cut(s) 121, 1600
LweI GCATC 4 cut(s) 217, 1303, 1436, 2053
MabI ACCWGGT 1 cut(s) 1912
MaeI CTAG 5 cut(s) 77, 713, 734, 1940, 2004
MaeII ACGT 4 cut(s) 61, 780, 1736, 1962
MaeIII GTNAC 4 cut(s) 826, 1036, 1160, 1695
MfeI CAATTG 5 cut(s) 18, 54, 993, 1169, 1452
MflI RGATCY 3 cut(s) 1321, 2249, 2465
MhlI GDGCHC 4 cut(s) 318, 1054, 1854, 2572
MlyI GAGTC 5 cut(s) 251, 495, 703, 754, 2023
MmeI TCCRAC 8 cut(s) 417, 790, 1602, 1659, 1845, 1854, 1911, 2523
Mph1103I ATGCAT 3 cut(s) 1318, 1383, 1395
MroXI GAANNNNTTC 5 cut(s) 386, 522, 573, 657, 2310
MslI CAYNNNNRTG 1 cut(s) 1564
MspCI CTTAAG 1 cut(s) 127
MspI CCGG 2 cut(s) 24, 1025
MspR9I CCNGG 4 cut(s) 139, 442, 1914, 2472
MunI CAATTG 5 cut(s) 18, 54, 993, 1169, 1452
Mva1269I GAATGC 1 cut(s) 1395
MvaI CCWGG 4 cut(s) 139, 442, 1914, 2472
MwoI GCNNNNNNNGC 6 cut(s) 20, 313, 722, 984, 1145, 1313
NcoI CCATGG 1 cut(s) 1559
NdeI CATATG 1 cut(s) 403
NmeAIII GCCGAG 1 cut(s) 61
NmuCI GTSAC 1 cut(s) 1695
NsiI ATGCAT 3 cut(s) 1318, 1383, 1395
NspI RCATGY 3 cut(s) 852, 1385, 1445
PasI CCCWGGG 1 cut(s) 2471
PciI ACATGT 2 cut(s) 848, 1441
PctI GAATGC 1 cut(s) 1395
PdmI GAANNNNTTC 5 cut(s) 386, 522, 573, 657, 2310
PkrI GCNGC 5 cut(s) 16, 136, 269, 977, 1615
PleI GAGTC 5 cut(s) 250, 494, 703, 754, 2023
PpsI GAGTC 5 cut(s) 250, 494, 703, 754, 2023
PscI ACATGT 2 cut(s) 848, 1441
PshBI ATTAAT 1 cut(s) 363
Psp124BI GAGCTC 1 cut(s) 1054
Psp6I CCWGG 4 cut(s) 137, 440, 1912, 2470
PspFI CCCAGC 1 cut(s) 2207
PspGI CCWGG 4 cut(s) 137, 440, 1912, 2470
PspPI GGNCC 2 cut(s) 1818, 2221
PstI CTGCAG 1 cut(s) 111
PstNI CAGNNNCTG 1 cut(s) 2320
PsuI RGATCY 3 cut(s) 1321, 2249, 2465
RsaI GTAC 4 cut(s) 454, 641, 886, 1557
RsaNI GTAC 4 cut(s) 453, 640, 885, 1556
RseI CAYNNNNRTG 1 cut(s) 1564
SacI GAGCTC 1 cut(s) 1054
SatI GCNGC 5 cut(s) 15, 135, 268, 976, 1614
Sau96I GGNCC 2 cut(s) 1818, 2221
ScaI AGTACT 1 cut(s) 641
SchI GAGTC 5 cut(s) 251, 495, 703, 754, 2023
ScrFI CCNGG 4 cut(s) 139, 442, 1914, 2472
SduI GDGCHC 4 cut(s) 318, 1054, 1854, 2572
SexAI ACCWGGT 1 cut(s) 1912
SfaNI GCATC 4 cut(s) 217, 1303, 1436, 2053
SfcI CTRYAG 1 cut(s) 107
SinI GGWCC 2 cut(s) 1818, 2221
SmiMI CAYNNNNRTG 1 cut(s) 1564
SmlI CTYRAG 3 cut(s) 127, 1093, 1577
SmoI CTYRAG 3 cut(s) 127, 1093, 1577
SsiI CCGC 4 cut(s) 268, 305, 976, 1360
SspI AATATT 3 cut(s) 1072, 1537, 2071
SspMI CTAG 5 cut(s) 77, 713, 734, 1940, 2004
SstI GAGCTC 1 cut(s) 1054
StyD4I CCNGG 4 cut(s) 137, 440, 1912, 2470
StyI CCWWGG 1 cut(s) 1559
TaaI ACNGT 9 cut(s) 46, 202, 452, 1013, 1042, 1194, 1620, 1754, 2228
TaiI ACGT 4 cut(s) 64, 783, 1739, 1965
TaqI TCGA 4 cut(s) 192, 459, 1861, 2520
TaqII GACCGA 1 cut(s) 296
TatI WGTACW 2 cut(s) 452, 639
TauI GCSGC 2 cut(s) 270, 978
TscAI CASTG 2 cut(s) 1332, 1959
TseFI GTSAC 1 cut(s) 1695
TseI GCWGC 3 cut(s) 14, 134, 1613
Tsp45I GTSAC 1 cut(s) 1695
TspDTI ATGAA 7 cut(s) 281, 381, 510, 692, 933, 2163, 2229
TspGWI ACGGA 4 cut(s) 308, 1435, 2321, 2462
TspRI CASTG 2 cut(s) 1332, 1959
Vha464I CTTAAG 1 cut(s) 127
VpaK11BI GGWCC 2 cut(s) 1818, 2221
VspI ATTAAT 1 cut(s) 363
XapI RAATTY 5 cut(s) 251, 469, 657, 1124, 1625
XceI RCATGY 3 cut(s) 852, 1385, 1445
XcmI CCANNNNNNNNNTGG 2 cut(s) 2120, 2215
XmnI GAANNNNTTC 5 cut(s) 386, 522, 573, 657, 2310
XspI CTAG 5 cut(s) 77, 713, 734, 1940, 2004
ZraI GACGTC 1 cut(s) 62
ZrmI AGTACT 1 cut(s) 641
Zsp2I ATGCAT 3 cut(s) 1318, 1383, 1395
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.