disease resistance
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Homeodomain | PF00046 | 38 - 99 | 2.4e-09 | Homeodomain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 612 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 437 |
| AccIII | TCCGGA | 1 cut(s) | 728 |
| AciI | CCGC | 2 cut(s) | 17, 678 |
| AclI | AACGTT | 1 cut(s) | 699 |
| AclWI | GGATC | 8 cut(s) | 165, 354, 367, 402, 415, 435, 448, 483 |
| AcuI | CTGAAG | 1 cut(s) | 644 |
| AcyI | GRCGYC | 1 cut(s) | 609 |
| AfaI | GTAC | 2 cut(s) | 115, 352 |
| AfeI | AGCGCT | 1 cut(s) | 649 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 437, 599 |
| AflIII | ACRYGT | 1 cut(s) | 238 |
| AgsI | TTSAA | 1 cut(s) | 575 |
| AhlI | ACTAGT | 2 cut(s) | 338, 467 |
| AjnI | CCWGG | 2 cut(s) | 116, 564 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 83, 115 |
| AluBI | AGCT | 6 cut(s) | 7, 77, 223, 434, 712, 734 |
| AluI | AGCT | 6 cut(s) | 7, 77, 223, 434, 712, 734 |
| Alw21I | GWGCWC | 4 cut(s) | 9, 201, 600, 714 |
| Alw44I | GTGCAC | 1 cut(s) | 596 |
| AlwI | GGATC | 8 cut(s) | 165, 354, 367, 402, 415, 435, 448, 483 |
| Ama87I | CYCGRG | 1 cut(s) | 285 |
| Aor13HI | TCCGGA | 1 cut(s) | 728 |
| Aor51HI | AGCGCT | 1 cut(s) | 649 |
| AoxI | GGCC | 1 cut(s) | 428 |
| ApaLI | GTGCAC | 1 cut(s) | 596 |
| ApeKI | GCWGC | 3 cut(s) | 74, 317, 734 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 407, 439, 440, 472 |
| AspLEI | GCGC | 1 cut(s) | 650 |
| AspS9I | GGNCC | 3 cut(s) | 381, 428, 462 |
| AsuHPI | GGTGA | 1 cut(s) | 554 |
| AvaI | CYCGRG | 1 cut(s) | 285 |
| AvaII | GGWCC | 2 cut(s) | 381, 462 |
| BaeGI | GKGCMC | 3 cut(s) | 188, 330, 600 |
| BamHI | GGATCC | 3 cut(s) | 359, 407, 440 |
| BanII | GRGCYC | 3 cut(s) | 9, 286, 714 |
| BauI | CACGAG | 1 cut(s) | 206 |
| Bbv12I | GWGCWC | 4 cut(s) | 9, 201, 600, 714 |
| BbvI | GCAGC | 3 cut(s) | 86, 304, 721 |
| BccI | CCATC | 3 cut(s) | 419, 476, 733 |
| BceAI | ACGGC | 2 cut(s) | 96, 616 |
| BciT130I | CCWGG | 2 cut(s) | 118, 566 |
| BcuI | ACTAGT | 2 cut(s) | 338, 467 |
| BfaI | CTAG | 3 cut(s) | 339, 468, 742 |
| BfmI | CTRYAG | 1 cut(s) | 192 |
| BfoI | RGCGCY | 1 cut(s) | 651 |
| BglII | AGATCT | 1 cut(s) | 210 |
| BisI | GCNGC | 3 cut(s) | 75, 318, 735 |
| BlpI | GCTNAGC | 1 cut(s) | 713 |
| BlsI | GCNGC | 3 cut(s) | 76, 319, 736 |
| Bme1390I | CCNGG | 2 cut(s) | 118, 566 |
| Bme18I | GGWCC | 2 cut(s) | 381, 462 |
| BmeT110I | CYCGRG | 1 cut(s) | 285 |
| BmgT120I | GGNCC | 3 cut(s) | 381, 428, 462 |
| BmiI | GGNNCC | 8 cut(s) | 30, 269, 361, 382, 409, 442, 463, 511 |
| BmrFI | CCNGG | 2 cut(s) | 118, 566 |
| BpmI | CTGGAG | 4 cut(s) | 117, 203, 306, 546 |
| Bpu10I | CCTNAGC | 1 cut(s) | 673 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 713 |
| BpuEI | CTTGAG | 2 cut(s) | 137, 728 |
| BsaHI | GRCGYC | 1 cut(s) | 609 |
| BsaJI | CCNNGG | 2 cut(s) | 330, 636 |
| BsaWI | WCCGGW | 1 cut(s) | 728 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 437, 599 |
| Bse1I | ACTGG | 6 cut(s) | 229, 323, 358, 391, 400, 529 |
| BseAI | TCCGGA | 1 cut(s) | 728 |
| BseBI | CCWGG | 2 cut(s) | 118, 566 |
| BseDI | CCNNGG | 2 cut(s) | 330, 636 |
| BseGI | GGATG | 2 cut(s) | 536, 725 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 437, 599 |
| BseMII | CTCAG | 2 cut(s) | 687, 727 |
| BseNI | ACTGG | 6 cut(s) | 229, 323, 358, 391, 400, 529 |
| BseRI | GAGGAG | 3 cut(s) | 68, 567, 570 |
| BseSI | GKGCMC | 3 cut(s) | 188, 330, 600 |
| BseXI | GCAGC | 3 cut(s) | 86, 304, 721 |
| BshFI | GGCC | 1 cut(s) | 430 |
| BsiHKAI | GWGCWC | 4 cut(s) | 9, 201, 600, 714 |
| BsiHKCI | CYCGRG | 1 cut(s) | 285 |
| BsiSI | CCGG | 1 cut(s) | 729 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 437, 599 |
| BsnI | GGCC | 1 cut(s) | 430 |
| BsoBI | CYCGRG | 1 cut(s) | 285 |
| Bsp1286I | GDGCHC | 7 cut(s) | 9, 188, 201, 286, 330, 600, 714 |
| Bsp13I | TCCGGA | 1 cut(s) | 728 |
| Bsp143I | GATC | 9 cut(s) | 157, 210, 359, 367, 407, 440, 488, 496, 559 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 713 |
| Bsp19I | CCATGG | 1 cut(s) | 330 |
| BspACI | CCGC | 2 cut(s) | 17, 678 |
| BspANI | GGCC | 1 cut(s) | 430 |
| BspCNI | CTCAG | 2 cut(s) | 686, 726 |
| BspEI | TCCGGA | 1 cut(s) | 728 |
| BspLI | GGNNCC | 8 cut(s) | 30, 269, 361, 382, 409, 442, 463, 511 |
| BspPI | GGATC | 8 cut(s) | 165, 354, 367, 402, 415, 435, 448, 483 |
| BsrI | ACTGG | 6 cut(s) | 229, 323, 358, 391, 400, 529 |
| BssECI | CCNNGG | 2 cut(s) | 330, 636 |
| BssMI | GATC | 9 cut(s) | 157, 210, 359, 367, 407, 440, 488, 496, 559 |
| BssNI | GRCGYC | 1 cut(s) | 609 |
| BssSI | CACGAG | 1 cut(s) | 206 |
| BssT1I | CCWWGG | 1 cut(s) | 330 |
| Bst2BI | CACGAG | 1 cut(s) | 206 |
| Bst2UI | CCWGG | 2 cut(s) | 118, 566 |
| Bst4CI | ACNGT | 1 cut(s) | 689 |
| Bst6I | CTCTTC | 1 cut(s) | 585 |
| BstACI | GRCGYC | 1 cut(s) | 609 |
| BstC8I | GCNNGC | 1 cut(s) | 432 |
| BstDEI | CTNAG | 2 cut(s) | 673, 713 |
| BstDSI | CCRYGG | 1 cut(s) | 330 |
| BstEII | GGTNACC | 2 cut(s) | 617, 680 |
| BstF5I | GGATG | 2 cut(s) | 536, 725 |
| BstH2I | RGCGCY | 1 cut(s) | 651 |
| BstHHI | GCGC | 1 cut(s) | 650 |
| BstKTI | GATC | 9 cut(s) | 160, 213, 362, 370, 410, 443, 491, 499, 562 |
| BstMBI | GATC | 9 cut(s) | 157, 210, 359, 367, 407, 440, 488, 496, 559 |
| BstNI | CCWGG | 2 cut(s) | 118, 566 |
| BstNSI | RCATGY | 1 cut(s) | 242 |
| BstPI | GGTNACC | 2 cut(s) | 617, 680 |
| BstSCI | CCNGG | 2 cut(s) | 116, 564 |
| BstSFI | CTRYAG | 1 cut(s) | 192 |
| BstSLI | GKGCMC | 3 cut(s) | 188, 330, 600 |
| BstV1I | GCAGC | 3 cut(s) | 86, 304, 721 |
| BstX2I | RGATCY | 6 cut(s) | 157, 210, 359, 407, 440, 488 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 77 |
| BstYI | RGATCY | 6 cut(s) | 157, 210, 359, 407, 440, 488 |
| BsuRI | GGCC | 1 cut(s) | 430 |
| BtgI | CCRYGG | 1 cut(s) | 330 |
| BtsCI | GGATG | 2 cut(s) | 536, 725 |
| BtsIMutI | CAGTG | 3 cut(s) | 330, 384, 694 |
| Cac8I | GCNNGC | 1 cut(s) | 432 |
| CfoI | GCGC | 1 cut(s) | 650 |
| Cfr13I | GGNCC | 3 cut(s) | 381, 428, 462 |
| CsiI | ACCWGGT | 1 cut(s) | 116 |
| Csp6I | GTAC | 2 cut(s) | 114, 351 |
| CviAII | CATG | 3 cut(s) | 94, 239, 331 |
| CviQI | GTAC | 2 cut(s) | 114, 351 |
| DdeI | CTNAG | 2 cut(s) | 673, 713 |
| DpnI | GATC | 9 cut(s) | 159, 212, 361, 369, 409, 442, 490, 498, 561 |
| DpnII | GATC | 9 cut(s) | 157, 210, 359, 367, 407, 440, 488, 496, 559 |
| Eam1104I | CTCTTC | 1 cut(s) | 585 |
| EarI | CTCTTC | 1 cut(s) | 585 |
| Ecl136II | GAGCTC | 2 cut(s) | 7, 712 |
| Eco130I | CCWWGG | 1 cut(s) | 330 |
| Eco24I | GRGCYC | 3 cut(s) | 9, 286, 714 |
| Eco47I | GGWCC | 2 cut(s) | 381, 462 |
| Eco47III | AGCGCT | 1 cut(s) | 649 |
| Eco53kI | GAGCTC | 2 cut(s) | 7, 712 |
| Eco57I | CTGAAG | 1 cut(s) | 644 |
| Eco88I | CYCGRG | 1 cut(s) | 285 |
| Eco91I | GGTNACC | 2 cut(s) | 617, 680 |
| EcoICRI | GAGCTC | 2 cut(s) | 7, 712 |
| EcoO65I | GGTNACC | 2 cut(s) | 617, 680 |
| EcoRII | CCWGG | 2 cut(s) | 116, 564 |
| EcoT14I | CCWWGG | 1 cut(s) | 330 |
| EcoT38I | GRGCYC | 3 cut(s) | 9, 286, 714 |
| ErhI | CCWWGG | 1 cut(s) | 330 |
| FaeI | CATG | 3 cut(s) | 97, 242, 334 |
| FaiI | YATR | 4 cut(s) | 95, 234, 240, 332 |
| FatI | CATG | 3 cut(s) | 93, 238, 330 |
| FauI | CCCGC | 1 cut(s) | 24 |
| Fnu4HI | GCNGC | 3 cut(s) | 75, 318, 735 |
| FokI | GGATG | 2 cut(s) | 523, 712 |
| FriOI | GRGCYC | 3 cut(s) | 9, 286, 714 |
| Fsp4HI | GCNGC | 3 cut(s) | 75, 318, 735 |
| FspBI | CTAG | 3 cut(s) | 339, 468, 742 |
| GlaI | GCGC | 1 cut(s) | 649 |
| GluI | GCNGC | 3 cut(s) | 75, 318, 735 |
| GsuI | CTGGAG | 4 cut(s) | 117, 203, 306, 546 |
| HaeII | RGCGCY | 1 cut(s) | 651 |
| HaeIII | GGCC | 1 cut(s) | 430 |
| HapII | CCGG | 1 cut(s) | 729 |
| HhaI | GCGC | 1 cut(s) | 650 |
| Hin1I | GRCGYC | 1 cut(s) | 609 |
| Hin1II | CATG | 3 cut(s) | 97, 242, 334 |
| Hin6I | GCGC | 1 cut(s) | 648 |
| HinP1I | GCGC | 1 cut(s) | 648 |
| HinfI | GANTC | 2 cut(s) | 124, 147 |
| HpaII | CCGG | 1 cut(s) | 729 |
| HphI | GGTGA | 1 cut(s) | 554 |
| Hpy166II | GTNNAC | 4 cut(s) | 311, 384, 465, 598 |
| Hpy188I | TCNGA | 1 cut(s) | 637 |
| Hpy188III | TCNNGA | 6 cut(s) | 134, 206, 271, 287, 707, 729 |
| Hpy8I | GTNNAC | 4 cut(s) | 311, 384, 465, 598 |
| HpyAV | CCTTC | 2 cut(s) | 619, 635 |
| HpyCH4III | ACNGT | 1 cut(s) | 689 |
| HpyCH4IV | ACGT | 4 cut(s) | 168, 276, 609, 699 |
| HpyCH4V | TGCA | 2 cut(s) | 544, 598 |
| HpyF3I | CTNAG | 2 cut(s) | 673, 713 |
| HpySE526I | ACGT | 4 cut(s) | 168, 276, 609, 699 |
| Hsp92I | GRCGYC | 1 cut(s) | 609 |
| Hsp92II | CATG | 3 cut(s) | 97, 242, 334 |
| HspAI | GCGC | 1 cut(s) | 648 |
| Kpn2I | TCCGGA | 1 cut(s) | 728 |
| Kzo9I | GATC | 9 cut(s) | 157, 210, 359, 367, 407, 440, 488, 496, 559 |
| LmnI | GCTCC | 4 cut(s) | 4, 12, 325, 731 |
| Lsp1109I | GCAGC | 3 cut(s) | 86, 304, 721 |
| MabI | ACCWGGT | 1 cut(s) | 116 |
| MaeI | CTAG | 3 cut(s) | 339, 468, 742 |
| MaeII | ACGT | 4 cut(s) | 168, 276, 609, 699 |
| MaeIII | GTNAC | 3 cut(s) | 617, 656, 680 |
| MalI | GATC | 9 cut(s) | 159, 212, 361, 369, 409, 442, 490, 498, 561 |
| MboI | GATC | 9 cut(s) | 157, 210, 359, 367, 407, 440, 488, 496, 559 |
| MboII | GAAGA | 1 cut(s) | 572 |
| MflI | RGATCY | 6 cut(s) | 157, 210, 359, 407, 440, 488 |
| MhlI | GDGCHC | 7 cut(s) | 9, 188, 201, 286, 330, 600, 714 |
| MluCI | AATT | 3 cut(s) | 373, 421, 454 |
| MroI | TCCGGA | 1 cut(s) | 728 |
| MseI | TTAA | 1 cut(s) | 180 |
| MspA1I | CMGCKG | 3 cut(s) | 77, 223, 434 |
| MspI | CCGG | 1 cut(s) | 729 |
| MspR9I | CCNGG | 2 cut(s) | 118, 566 |
| MvaI | CCWGG | 2 cut(s) | 118, 566 |
| NcoI | CCATGG | 1 cut(s) | 330 |
| NdeII | GATC | 9 cut(s) | 157, 210, 359, 367, 407, 440, 488, 496, 559 |
| NlaIII | CATG | 3 cut(s) | 97, 242, 334 |
| NlaIV | GGNNCC | 8 cut(s) | 30, 269, 361, 382, 409, 442, 463, 511 |
| NspI | RCATGY | 1 cut(s) | 242 |
| PaeR7I | CTCGAG | 1 cut(s) | 285 |
| PciI | ACATGT | 1 cut(s) | 238 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 606 |
| PfeI | GAWTC | 2 cut(s) | 124, 147 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 437 |
| PkrI | GCNGC | 3 cut(s) | 76, 319, 736 |
| PscI | ACATGT | 1 cut(s) | 238 |
| Psp124BI | GAGCTC | 2 cut(s) | 9, 714 |
| Psp1406I | AACGTT | 1 cut(s) | 699 |
| Psp6I | CCWGG | 2 cut(s) | 116, 564 |
| PspEI | GGTNACC | 2 cut(s) | 617, 680 |
| PspGI | CCWGG | 2 cut(s) | 116, 564 |
| PspN4I | GGNNCC | 8 cut(s) | 30, 269, 361, 382, 409, 442, 463, 511 |
| PspPI | GGNCC | 3 cut(s) | 381, 428, 462 |
| PsuI | RGATCY | 6 cut(s) | 157, 210, 359, 407, 440, 488 |
| PvuII | CAGCTG | 3 cut(s) | 77, 223, 434 |
| RsaI | GTAC | 2 cut(s) | 115, 352 |
| RsaNI | GTAC | 2 cut(s) | 114, 351 |
| SacI | GAGCTC | 2 cut(s) | 9, 714 |
| SaqAI | TTAA | 1 cut(s) | 180 |
| SatI | GCNGC | 3 cut(s) | 75, 318, 735 |
| Sau3AI | GATC | 9 cut(s) | 157, 210, 359, 367, 407, 440, 488, 496, 559 |
| Sau96I | GGNCC | 3 cut(s) | 381, 428, 462 |
| ScrFI | CCNGG | 2 cut(s) | 118, 566 |
| SduI | GDGCHC | 7 cut(s) | 9, 188, 201, 286, 330, 600, 714 |
| SexAI | ACCWGGT | 1 cut(s) | 116 |
| SfcI | CTRYAG | 1 cut(s) | 192 |
| Sfr274I | CTCGAG | 1 cut(s) | 285 |
| SinI | GGWCC | 2 cut(s) | 381, 462 |
| SlaI | CTCGAG | 1 cut(s) | 285 |
| SmlI | CTYRAG | 3 cut(s) | 152, 285, 707 |
| SmoI | CTYRAG | 3 cut(s) | 152, 285, 707 |
| SpeI | ACTAGT | 2 cut(s) | 338, 467 |
| Sse9I | AATT | 3 cut(s) | 373, 421, 454 |
| SsiI | CCGC | 2 cut(s) | 17, 678 |
| SspMI | CTAG | 3 cut(s) | 339, 468, 742 |
| SstI | GAGCTC | 2 cut(s) | 9, 714 |
| StyD4I | CCNGG | 2 cut(s) | 116, 564 |
| StyI | CCWWGG | 1 cut(s) | 330 |
| TaaI | ACNGT | 1 cut(s) | 689 |
| TaiI | ACGT | 4 cut(s) | 171, 279, 612, 702 |
| TaqI | TCGA | 2 cut(s) | 286, 414 |
| TasI | AATT | 3 cut(s) | 373, 421, 454 |
| TfiI | GAWTC | 2 cut(s) | 124, 147 |
| Tru1I | TTAA | 1 cut(s) | 180 |
| Tru9I | TTAA | 1 cut(s) | 180 |
| TscAI | CASTG | 3 cut(s) | 330, 391, 694 |
| TseI | GCWGC | 3 cut(s) | 74, 317, 734 |
| TspDTI | ATGAA | 1 cut(s) | 314 |
| TspRI | CASTG | 3 cut(s) | 330, 391, 694 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 437 |
| VneI | GTGCAC | 1 cut(s) | 596 |
| VpaK11BI | GGWCC | 2 cut(s) | 381, 462 |
| XceI | RCATGY | 1 cut(s) | 242 |
| XhoI | CTCGAG | 1 cut(s) | 285 |
| XspI | CTAG | 3 cut(s) | 339, 468, 742 |
| ZraI | GACGTC | 1 cut(s) | 610 |