RchiOBHm_Chr4g0397841

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Reverse (-)
14241205 .. 14243807
2603 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ37008

Sequence Viewer

Length: 2436 bp
ATGGAGTTTCTTGTTGCAATTGGTACTGGAATTGTTGGAAAGATTGCTGAGTTCACAGTTGCACCAGTTATACGCCAAGTGGGTTATGTAATCCACTTCAACAAGAACCTCAAAAAACTAGAGAGTCAAGTAGATAAATTGGGTGATGCCAGACAAAGCATGAAGCGTGCTGTTGAAACAGAGGAAAGAAAAGGTAGAGAAATTAAAGCAGGTGTCAAGAACTGGCTGACTAAAGTGGATGAGATGACTAAAGAAGCAGACGATTTCTTGAAAGATGAACAGCATGCAGAGACTAGATGTCTCCATGGCTTTTGTCCTAATCTAAAGTTTCGCCATCATCGCAGCAGGAAATCAACAAAATTGTTTCAAGAAGTTGCTGAGCTCCTTCGCACAGATTCTGGCGATATTGCATACGATGTCAAACCAGAGGAGGTGTGCATCACACCTGCTAAAGATTACCAGGCCTTTGATTCAAGGACTTCAGTTGCGAAGGAAATCATGAATGAACTGAGACAATCTAATACCGACATGATTGGGGTGTACGGTATTGGGGGCGTGGGGAAGACAACACTTGCTAAAGAAGTTTATCGGCAAGCTCAACAAGATAAAACGTTATTTGATGATGCTGTTATAGTACTAGATGTAAAAAAGATTCCAGGTTTGGAAGAAATTCAAAAAAGAATTGCTGAAAAGTTGGGAATGGACATTCTCGGAGATGAGACTACAGACAAAAGAGCTAGTCGTCTTTGTAGTAGGATAAAAAAGAAGAAAGTTCTGGTAATTTTGGATGACATACAAGAAAAAATTGATTTGGAGATTGTGGGACTTCCATTGGTGTCCAATTGTAAAGTATTGTTGACATCTAGAACCAGAGAGGTATTATCGGGTGAGATGCATACACAAAAAGAGTTTCAACTTGACCTTTTAGATGCAGAAGAAAACTGGAGTTTATTTGAGAAGATGGCAGGTGATGTTGTTCAAAATTTTGCCATACGAGAAGTAGCAACAGAAGTAGCCCAAAAGTGTGGAGGCTTGCCAGTTTTAGTGGTAACAGTTGCAAGTGCCCTGAAGAATAGAAGTGAATTACATGCTTGGAAAGATGCCTTGCGACGCCTAAAAATATTTGACAAGCAAGGATTTATGGAAAAAGCGTACTCGGCTCTAGAGTGGAGTTACGAGCAATTAGATGATAAGGAGCTTAAGCCATTGTTCTTGCTTTCTGGAATTATCAAGGGTTCCTCTATATGTCTTAATGATTTACTGAAATATAGTATGGGCTTGGGTTTGATTAAAAACGTGGATACAATGGAAGAAGCACAGGATGCATTGCATTCACTGGTTGAAAAACTTAAAGATTATTGTCTGTTGCTAGAGGACAATGATCATAATGGAGTTGTCAGAATGCATGATCTTGTTCATGAAGTTGTAAACCGGATTGCCTGGAGAGATAAACACGTCTTCAAAGTTGCTATTGGAGACGAGTTCAAAGAATGGCCGACTAAGGATTTTTGTACAAATTGCACTATGATCATTCTCAAAAGCTGCAGTATCCCCCAGCTTCCGAAAGGTTTGGAATGCCCAGAACTGAAAATGTTTAACTTTACTAGTAGGGATGTTGATCACTACTTGGAAATTCCTAGCAACTTTTTTGGAGGGATGAAGAAAGTCAGGGTATTGGACTTGACTAAGTTGAGTATCCCATTGCTACCTTCATCTCTTCAATTCCTAGAAAGCCTTCGAACGTTGTGTTTGGATCAATGCACCTTGGGAGATGTAACTCTGATCGGACAGCTACAAAACTTGGAAATTCTCAGCTTTATAGAGTCCAAATTCAAAGAGTTGCCCAAAGAAATAGGGCAATTGACTCGTCTACGATTTTTGGATTTGAATGGTTGCTCTCAACTCGAAGTGATTTCACCTAATGTTATATCAAACTTGAAAAGGTTAGAAAACTTGAGAATGGGTAACAGCTTTAATCGATGGGAGGGTGAAGGAGTCATCAGTGGTGAAAGAAGAAATGCAAACCTTGAAGAGCTAAAGCACTTGCCTCAGCTAACTGCTTTACAAATACATATCCCAGATGCTAGCATCCTTCCAGCAGATTTGTTCACCACTAGTAAGTTAAAGAGATTCCAAATATGTATTGGTTATGCGTGGAAATGGGATAATGTGGATGAAGCCCTCAATGCACTAAAGCTCCGACTCACTGCCAGCAATGAATTAGACCAAGGTCTAAGAATGTTGCTGAAAAGAACTGAAGACTTGTACTTGGAGGGGACAGAGGGTGTTAATAATAGTATTGTCGATCAAATAGGTGCCGAAGGTTTTCAGATATTGAAGCATCTCCATCTCCAAACGAATGCCGAGTTTACGTATATCATAAATGGGAAGGTGTGCTCCTTCATTTGTTCAAATTTGTCATCATATTATAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

811

Amino Acids

92.06

Weight (kDa)

6.11

Isoelectric Point (pI)

35.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 163 - 323 5.1e-30 NB-ARC domain
AAA_22 PF13401 174 - 269 6.8e-07 AAA domain
LRR_14 PF23598 515 - 785 2.1e-12 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2430
AarI CACCTGC 3 cut(s) 200, 454, 956
Acc36I ACCTGC 3 cut(s) 200, 454, 956
AccB1I GGYRCC 1 cut(s) 2315
AccI GTMKAC 1 cut(s) 1870
AclI AACGTT 2 cut(s) 611, 1742
AclWI GGATC 1 cut(s) 1761
AcoI YGGCCR 1 cut(s) 1493
AcsI RAATTY 6 cut(s) 669, 982, 1632, 1806, 1829, 2413
AcuI CTGAAG 3 cut(s) 465, 1088, 2277
AcyI GRCGYC 1 cut(s) 1111
AfaI GTAC 6 cut(s) 25, 542, 636, 1154, 1513, 2267
AflII CTTAAG 1 cut(s) 1199
AflIII ACRYGT 1 cut(s) 1453
AhdI GACNNNNNGTC 1 cut(s) 297
AhlI ACTAGT 2 cut(s) 1604, 2114
AjiI CACGTC 1 cut(s) 1456
AjnI CCWGG 3 cut(s) 459, 655, 1439
Alw21I GWGCWC 2 cut(s) 384, 2399
Alw26I GTCTC 5 cut(s) 284, 305, 505, 713, 1470
AlwI GGATC 1 cut(s) 1761
AlwNI CAGNNNCTG 1 cut(s) 398
AoxI GGCC 2 cut(s) 462, 1493
ApeKI GCWGC 2 cut(s) 342, 1542
ApoI RAATTY 6 cut(s) 669, 982, 1632, 1806, 1829, 2413
Asp700I GAANNNNTTC 3 cut(s) 669, 1734, 2325
AsuHPI GGTGA 7 cut(s) 155, 899, 980, 1908, 2000, 2018, 2101
AsuII TTCGAA 1 cut(s) 1738
AsuNHI GCTAGC 1 cut(s) 2084
BaeGI GKGCMC 1 cut(s) 1066
BanI GGYRCC 1 cut(s) 2315
BanII GRGCYC 1 cut(s) 384
BbsI GAAGAC 3 cut(s) 569, 1450, 2265
Bbv12I GWGCWC 2 cut(s) 384, 2399
BbvCI CCTCAGC 1 cut(s) 2049
BbvI GCAGC 2 cut(s) 354, 1529
BccI CCATC 4 cut(s) 342, 955, 1974, 2355
BcgI CGANNNNNNTGC 2 cut(s) 1847, 1881
BciT130I CCWGG 3 cut(s) 461, 657, 1441
BciVI GTATCC 3 cut(s) 1294, 1559, 1706
BclI TGATCA 3 cut(s) 1381, 1527, 1618
BcoDI GTCTC 5 cut(s) 284, 305, 505, 713, 1470
BcuI ACTAGT 2 cut(s) 1604, 2114
BfmI CTRYAG 2 cut(s) 723, 1543
BfrI CTTAAG 1 cut(s) 1199
BfuAI ACCTGC 3 cut(s) 200, 454, 956
BfuI GTATCC 3 cut(s) 1294, 1559, 1706
BisI GCNGC 2 cut(s) 343, 1543
BlpI GCTNAGC 1 cut(s) 378
BlsI GCNGC 2 cut(s) 344, 1544
BmcAI AGTACT 1 cut(s) 636
Bme1390I CCNGG 3 cut(s) 461, 657, 1441
BmeRI GACNNNNNGTC 1 cut(s) 297
BmgBI CACGTC 1 cut(s) 1456
BmiI GGNNCC 2 cut(s) 1237, 2317
BmrFI CCNGG 3 cut(s) 461, 657, 1441
BmtI GCTAGC 1 cut(s) 2088
BoxI GACNNNNGTC 1 cut(s) 2229
BpiI GAAGAC 3 cut(s) 569, 1450, 2265
BpmI CTGGAG 2 cut(s) 964, 1462
Bpu10I CCTNAGC 1 cut(s) 2049
Bpu1102I GCTNAGC 1 cut(s) 378
Bpu14I TTCGAA 1 cut(s) 1738
BpuEI CTTGAG 1 cut(s) 1975
Bsa29I ATCGAT 1 cut(s) 1978
BsaAI YACGTR 1 cut(s) 2373
BsaBI GATNNNNATC 1 cut(s) 1617
BsaHI GRCGYC 1 cut(s) 1111
BsaJI CCNNGG 3 cut(s) 304, 1764, 2227
BsaWI WCCGGW 1 cut(s) 1431
BsaXI ACNNNNNCTCC 2 cut(s) 2181, 2211
Bse1I ACTGG 6 cut(s) 31, 65, 227, 947, 1037, 1341
Bse3DI GCAATG 3 cut(s) 1325, 1700, 2221
Bse8I GATNNNNATC 1 cut(s) 1617
BseBI CCWGG 3 cut(s) 461, 657, 1441
BseCI ATCGAT 1 cut(s) 1978
BseDI CCNNGG 3 cut(s) 304, 1764, 2227
BseGI GGATG 7 cut(s) 244, 793, 1327, 1618, 1662, 2088, 2179
BseJI GATNNNNATC 1 cut(s) 1617
BseMI GCAATG 3 cut(s) 1325, 1700, 2221
BseMII CTCAG 5 cut(s) 39, 369, 500, 1825, 2063
BseNI ACTGG 6 cut(s) 31, 65, 227, 947, 1037, 1341
BseRI GAGGAG 1 cut(s) 443
BseSI GKGCMC 1 cut(s) 1066
BseXI GCAGC 2 cut(s) 354, 1529
BseYI CCCAGC 1 cut(s) 1554
BshFI GGCC 2 cut(s) 464, 1495
BshNI GGYRCC 1 cut(s) 2315
BshVI ATCGAT 1 cut(s) 1978
BsiHKAI GWGCWC 2 cut(s) 384, 2399
BsiSI CCGG 1 cut(s) 1432
BslFI GGGAC 2 cut(s) 837, 2290
BsmAI GTCTC 5 cut(s) 284, 305, 505, 713, 1470
BsmBI CGTCTC 1 cut(s) 1470
BsmFI GGGAC 2 cut(s) 837, 2290
BsmI GAATGC 4 cut(s) 1330, 1407, 1580, 2365
BsnI GGCC 2 cut(s) 464, 1495
Bsp119I TTCGAA 1 cut(s) 1738
Bsp1286I GDGCHC 3 cut(s) 384, 1066, 2399
Bsp1407I TGTACA 1 cut(s) 1511
Bsp143I GATC 7 cut(s) 1381, 1408, 1527, 1618, 1753, 1782, 2305
Bsp1720I GCTNAGC 1 cut(s) 378
Bsp19I CCATGG 1 cut(s) 304
BspANI GGCC 2 cut(s) 464, 1495
BspCNI CTCAG 5 cut(s) 40, 370, 501, 1824, 2062
BspDI ATCGAT 1 cut(s) 1978
BspHI TCATGA 2 cut(s) 498, 1417
BspLI GGNNCC 2 cut(s) 1237, 2317
BspMAI CTGCAG 1 cut(s) 1547
BspMI ACCTGC 3 cut(s) 200, 454, 956
BspOI GCTAGC 1 cut(s) 2088
BspPI GGATC 1 cut(s) 1761
BspQI GCTCTTC 1 cut(s) 2025
BspT104I TTCGAA 1 cut(s) 1738
BspT107I GGYRCC 1 cut(s) 2315
BspTI CTTAAG 1 cut(s) 1199
BsrDI GCAATG 3 cut(s) 1325, 1700, 2221
BsrGI TGTACA 1 cut(s) 1511
BsrI ACTGG 6 cut(s) 31, 65, 227, 947, 1037, 1341
BssECI CCNNGG 3 cut(s) 304, 1764, 2227
BssMI GATC 7 cut(s) 1381, 1408, 1527, 1618, 1753, 1782, 2305
BssNI GRCGYC 1 cut(s) 1111
BssT1I CCWWGG 3 cut(s) 304, 1764, 2227
Bst2UI CCWGG 3 cut(s) 461, 657, 1441
Bst4CI ACNGT 3 cut(s) 58, 545, 1054
Bst6I CTCTTC 2 cut(s) 1722, 2025
BstACI GRCGYC 1 cut(s) 1111
BstAFI CTTAAG 1 cut(s) 1199
BstAPI GCANNNNNTGC 1 cut(s) 1322
BstAUI TGTACA 1 cut(s) 1511
BstBAI YACGTR 1 cut(s) 2373
BstBI TTCGAA 1 cut(s) 1738
BstC8I GCNNGC 6 cut(s) 168, 285, 594, 1034, 2086, 2212
BstDEI CTNAG 8 cut(s) 48, 378, 509, 1500, 1686, 1811, 2049, 2234
BstDSI CCRYGG 1 cut(s) 304
BstF5I GGATG 7 cut(s) 244, 793, 1327, 1618, 1662, 2088, 2179
BstKTI GATC 7 cut(s) 1384, 1411, 1530, 1621, 1756, 1785, 2308
BstMAI GTCTC 5 cut(s) 284, 305, 505, 713, 1470
BstMBI GATC 7 cut(s) 1381, 1408, 1527, 1618, 1753, 1782, 2305
BstMWI GCNNNNNNNGC 4 cut(s) 339, 1157, 1322, 2186
BstNI CCWGG 3 cut(s) 461, 657, 1441
BstNSI RCATGY 2 cut(s) 287, 1091
BstPAI GACNNNNGTC 1 cut(s) 2229
BstSCI CCNGG 3 cut(s) 459, 655, 1439
BstSFI CTRYAG 2 cut(s) 723, 1543
BstSLI GKGCMC 1 cut(s) 1066
BstSNI TACGTA 1 cut(s) 2373
BstV1I GCAGC 2 cut(s) 354, 1529
BstV2I GAAGAC 3 cut(s) 569, 1450, 2265
BstXI CCANNNNNNTGG 1 cut(s) 1025
Bsu15I ATCGAT 1 cut(s) 1978
BsuI GTATCC 3 cut(s) 1294, 1559, 1706
BsuRI GGCC 2 cut(s) 464, 1495
BsuTUI ATCGAT 1 cut(s) 1978
BtgI CCRYGG 1 cut(s) 304
BtgZI GCGATG 1 cut(s) 323
BtrI CACGTC 1 cut(s) 1456
BtsCI GGATG 7 cut(s) 244, 793, 1327, 1618, 1662, 2088, 2179
BtsI GCAGTG 1 cut(s) 2205
BtsIMutI CAGTG 3 cut(s) 1334, 2008, 2205
BveI ACCTGC 3 cut(s) 200, 454, 956
Cac8I GCNNGC 6 cut(s) 168, 285, 594, 1034, 2086, 2212
CaiI CAGNNNCTG 1 cut(s) 398
CciI TCATGA 2 cut(s) 498, 1417
ClaI ATCGAT 1 cut(s) 1978
CseI GACGC 1 cut(s) 1119
Csp6I GTAC 6 cut(s) 24, 541, 635, 1153, 1512, 2266
CviAII CATG 8 cut(s) 160, 284, 305, 499, 529, 1088, 1406, 1418
CviQI GTAC 6 cut(s) 24, 541, 635, 1153, 1512, 2266
DdeI CTNAG 8 cut(s) 48, 378, 509, 1500, 1686, 1811, 2049, 2234
DpnI GATC 7 cut(s) 1383, 1410, 1529, 1620, 1755, 1784, 2307
DpnII GATC 7 cut(s) 1381, 1408, 1527, 1618, 1753, 1782, 2305
DriI GACNNNNNGTC 1 cut(s) 297
EaeI YGGCCR 1 cut(s) 1493
Eam1104I CTCTTC 2 cut(s) 1722, 2025
Eam1105I GACNNNNNGTC 1 cut(s) 297
EarI CTCTTC 2 cut(s) 1722, 2025
Ecl136II GAGCTC 1 cut(s) 382
Eco105I TACGTA 1 cut(s) 2373
Eco130I CCWWGG 3 cut(s) 304, 1764, 2227
Eco147I AGGCCT 1 cut(s) 464
Eco24I GRGCYC 1 cut(s) 384
Eco53kI GAGCTC 1 cut(s) 382
Eco57I CTGAAG 3 cut(s) 465, 1088, 2277
EcoICRI GAGCTC 1 cut(s) 382
EcoRII CCWGG 3 cut(s) 459, 655, 1439
EcoT14I CCWWGG 3 cut(s) 304, 1764, 2227
EcoT22I ATGCAT 3 cut(s) 897, 1327, 1407
EcoT38I GRGCYC 1 cut(s) 384
ErhI CCWWGG 3 cut(s) 304, 1764, 2227
Esp3I CGTCTC 1 cut(s) 1470
FaeI CATG 8 cut(s) 163, 287, 308, 502, 532, 1091, 1409, 1421
FaqI GGGAC 2 cut(s) 837, 2290
FatI CATG 8 cut(s) 159, 283, 304, 498, 528, 1087, 1405, 1417
FbaI TGATCA 3 cut(s) 1381, 1527, 1618
FblI GTMKAC 1 cut(s) 1870
Fnu4HI GCNGC 2 cut(s) 343, 1543
FokI GGATG 7 cut(s) 251, 800, 1334, 1625, 1669, 2075, 2186
FriOI GRGCYC 1 cut(s) 384
Fsp4HI GCNGC 2 cut(s) 343, 1543
GluI GCNGC 2 cut(s) 343, 1543
GsaI CCCAGC 1 cut(s) 1558
GsuI CTGGAG 2 cut(s) 964, 1462
HaeIII GGCC 2 cut(s) 464, 1495
HapII CCGG 1 cut(s) 1432
HgaI GACGC 1 cut(s) 1119
Hin1I GRCGYC 1 cut(s) 1111
Hin1II CATG 8 cut(s) 163, 287, 308, 502, 532, 1091, 1409, 1421
HincII GTYRAC 1 cut(s) 858
HindII GTYRAC 1 cut(s) 858
HinfI GANTC 9 cut(s) 124, 395, 470, 652, 1823, 1864, 1995, 2130, 2202
HpaII CCGG 1 cut(s) 1432
HphI GGTGA 7 cut(s) 155, 899, 980, 1908, 2000, 2018, 2101
Hpy166II GTNNAC 7 cut(s) 54, 541, 858, 1429, 1871, 2109, 2370
Hpy188I TCNGA 7 cut(s) 713, 1400, 1563, 1782, 1787, 2201, 2331
Hpy188III TCNNGA 8 cut(s) 217, 268, 368, 499, 864, 1163, 1221, 1418
Hpy8I GTNNAC 7 cut(s) 54, 541, 858, 1429, 1871, 2109, 2370
Hpy99I CGWCG 1 cut(s) 1113
HpyAV CCTTC 9 cut(s) 395, 484, 1719, 1745, 1985, 2102, 2315, 2383, 2410
HpyCH4III ACNGT 3 cut(s) 58, 545, 1054
HpyCH4IV ACGT 5 cut(s) 611, 1296, 1455, 1742, 2372
HpyF10VI GCNNNNNNNGC 4 cut(s) 339, 1157, 1322, 2186
HpyF3I CTNAG 8 cut(s) 48, 378, 509, 1500, 1686, 1811, 2049, 2234
HpySE526I ACGT 5 cut(s) 611, 1296, 1455, 1742, 2372
Hsp92I GRCGYC 1 cut(s) 1111
Hsp92II CATG 8 cut(s) 163, 287, 308, 502, 532, 1091, 1409, 1421
Ksp22I TGATCA 3 cut(s) 1381, 1527, 1618
Kzo9I GATC 7 cut(s) 1381, 1408, 1527, 1618, 1753, 1782, 2305
LguI GCTCTTC 1 cut(s) 2025
LmnI GCTCC 4 cut(s) 387, 1195, 2202, 2402
Lsp1109I GCAGC 2 cut(s) 354, 1529
MaeII ACGT 5 cut(s) 611, 1296, 1455, 1742, 2372
MaeIII GTNAC 4 cut(s) 1048, 1172, 1774, 1964
MalI GATC 7 cut(s) 1383, 1410, 1529, 1620, 1755, 1784, 2307
MboI GATC 7 cut(s) 1381, 1408, 1527, 1618, 1753, 1782, 2305
MfeI CAATTG 3 cut(s) 18, 841, 1859
MhlI GDGCHC 3 cut(s) 384, 1066, 2399
MlyI GAGTC 5 cut(s) 133, 1832, 1858, 2004, 2196
MmeI TCCRAC 2 cut(s) 16, 2224
Mph1103I ATGCAT 3 cut(s) 897, 1327, 1407
MroXI GAANNNNTTC 3 cut(s) 669, 1734, 2325
MspCI CTTAAG 1 cut(s) 1199
MspI CCGG 1 cut(s) 1432
MspR9I CCNGG 3 cut(s) 461, 657, 1441
MunI CAATTG 3 cut(s) 18, 841, 1859
Mva1269I GAATGC 4 cut(s) 1330, 1407, 1580, 2365
MvaI CCWGG 3 cut(s) 461, 657, 1441
MwoI GCNNNNNNNGC 4 cut(s) 339, 1157, 1322, 2186
NcoI CCATGG 1 cut(s) 304
NdeII GATC 7 cut(s) 1381, 1408, 1527, 1618, 1753, 1782, 2305
NheI GCTAGC 1 cut(s) 2084
NlaIII CATG 8 cut(s) 163, 287, 308, 502, 532, 1091, 1409, 1421
NlaIV GGNNCC 2 cut(s) 1237, 2317
NmeAIII GCCGAG 2 cut(s) 1136, 2389
NsiI ATGCAT 3 cut(s) 897, 1327, 1407
NspI RCATGY 2 cut(s) 287, 1091
NspV TTCGAA 1 cut(s) 1738
PaeI GCATGC 1 cut(s) 287
PagI TCATGA 2 cut(s) 498, 1417
PaqCI CACCTGC 3 cut(s) 200, 454, 956
PceI AGGCCT 1 cut(s) 464
PciSI GCTCTTC 1 cut(s) 2025
PctI GAATGC 4 cut(s) 1330, 1407, 1580, 2365
PdmI GAANNNNTTC 3 cut(s) 669, 1734, 2325
PfeI GAWTC 4 cut(s) 395, 470, 652, 2130
PkrI GCNGC 2 cut(s) 344, 1544
PleI GAGTC 5 cut(s) 132, 1831, 1858, 2003, 2196
PpsI GAGTC 5 cut(s) 132, 1831, 1858, 2003, 2196
Ppu21I YACGTR 1 cut(s) 2373
PshAI GACNNNNGTC 1 cut(s) 2229
PsiI TTATAA 1 cut(s) 2430
Psp124BI GAGCTC 1 cut(s) 384
Psp1406I AACGTT 2 cut(s) 611, 1742
Psp6I CCWGG 3 cut(s) 459, 655, 1439
PspFI CCCAGC 1 cut(s) 1554
PspGI CCWGG 3 cut(s) 459, 655, 1439
PspN4I GGNNCC 2 cut(s) 1237, 2317
PstI CTGCAG 1 cut(s) 1547
PstNI CAGNNNCTG 1 cut(s) 398
RsaI GTAC 6 cut(s) 25, 542, 636, 1154, 1513, 2267
RsaNI GTAC 6 cut(s) 24, 541, 635, 1153, 1512, 2266
SacI GAGCTC 1 cut(s) 384
SapI GCTCTTC 1 cut(s) 2025
SatI GCNGC 2 cut(s) 343, 1543
Sau3AI GATC 7 cut(s) 1381, 1408, 1527, 1618, 1753, 1782, 2305
ScaI AGTACT 1 cut(s) 636
SchI GAGTC 5 cut(s) 133, 1832, 1858, 2004, 2196
ScrFI CCNGG 3 cut(s) 461, 657, 1441
SduI GDGCHC 3 cut(s) 384, 1066, 2399
SfcI CTRYAG 2 cut(s) 723, 1543
SfuI TTCGAA 1 cut(s) 1738
SmlI CTYRAG 2 cut(s) 1199, 1954
SmoI CTYRAG 2 cut(s) 1199, 1954
SnaBI TACGTA 1 cut(s) 2373
SpeI ACTAGT 2 cut(s) 1604, 2114
SphI GCATGC 1 cut(s) 287
SseBI AGGCCT 1 cut(s) 464
SspI AATATT 1 cut(s) 1122
SstI GAGCTC 1 cut(s) 384
StuI AGGCCT 1 cut(s) 464
StyD4I CCNGG 3 cut(s) 459, 655, 1439
StyI CCWWGG 3 cut(s) 304, 1764, 2227
TaaI ACNGT 3 cut(s) 58, 545, 1054
TaiI ACGT 5 cut(s) 614, 1299, 1458, 1745, 2375
TaqI TCGA 4 cut(s) 1738, 1905, 1978, 2304
TatI WGTACW 3 cut(s) 634, 1511, 2265
TfiI GAWTC 4 cut(s) 395, 470, 652, 2130
TscAI CASTG 3 cut(s) 1341, 2008, 2212
TseI GCWGC 2 cut(s) 342, 1542
TspRI CASTG 3 cut(s) 1341, 2008, 2212
Vha464I CTTAAG 1 cut(s) 1199
XapI RAATTY 6 cut(s) 669, 982, 1632, 1806, 1829, 2413
XbaI TCTAGA 2 cut(s) 863, 1162
XceI RCATGY 2 cut(s) 287, 1091
XcmI CCANNNNNNNNNTGG 1 cut(s) 2141
XmiI GTMKAC 1 cut(s) 1870
XmnI GAANNNNTTC 3 cut(s) 669, 1734, 2325
ZrmI AGTACT 1 cut(s) 636
Zsp2I ATGCAT 3 cut(s) 897, 1327, 1407
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.