Rmu_sc0015959.1_g000004

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0015959.1
Physical Location & Seq
Reverse (-)
13084 .. 16904
3821 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0015959.1_g000004.1.cds

Sequence Viewer

Length: 2598 bp
atggactcaattctttcaaaaattgccgagtacacaattgaacccattggacgcatactgggacgccaagtgggttatgtaattcactgcagaaccaatatccgaaaactacaggctcaagtggaagaattgaaagctgccagagatgcgatagataataaggttgctgaagctgaaacaaaaggtgaaaaaattcaaccagatgtccagttgtggctgaaaaaaatgggtgagatcactgcacagacagatgaattgttgaacgaagaaagccaagcaaagctgaaatgtctccgaggcttttgtcctaatctgactacccgtcatcagctaagcagggaatcaacaaaactggtacaggaggttgctgaacactatgaaaaaagaggattttcccaagtttcgtgtggaattcttcggaaggaggtctggggtgtgactaccggagattaccaggcttttcaatcaaggatatcaattgtgaaggaaatcatggatggtctgaaagattctgatattcagaggataggggtgtgtggaattggaggagtgggtaaaaccacattagtcaaagaagtttacaagcaagcttcagagaataaaaagttatttgataatgtggttatcctactagatgtgaagaaggagccaaaccttgaagcaattcaaaagaaaatcgttgagcagttgagcatggacattcttccaaatgaaactatagtcggaagagccagtcgtctatgtgccaagatacaaggcaaaaaggttcttgtgattttggatgatgttcaagaaaaaattgatttggaggttgtgggacttccccgtctaccaacttgtaaaattttagtgacatgcagaactcgggaagttctatcttttgatgagatgcgcgctgaaaaagttttccagcttgaccttttagttaaagaagagacatggagtttgtttatgaggatggcaggagatgttgttgaacacaatagtcgtgtacgagatgtagcaatccaaatagccgaaaaatgtggaggcatatttggcctggagtggagttacgatcaactggatgacaaggagcttaaaccaatattcttgctctgcggaattatagtgaagcagaaccatatttatttgcaagacttgttgaaatatggtatgggtttaggtttgtttaagaacatctattcagtggaagaagcacaagattccttggatacattgatagaaaagctgaaagattcttgcttgttgctagatagtgatactgagggatgtgtcagaatgcatgatcttgtatgtgatgttgctaaatggatcgcatacagagatcaatccatattatcagtagaatatggaggtgagttgaaggaatggccagcaaaggatttcttgaagaagtgcactaaaatctctctcccgtacagcaatattccctcactttctgaaatacccttggaatgccccaaagtagaaatgttttattggtacagtaaagatgactcggtggtagtcccatcaaattttttcagcgagatgcggaaactcaaagtgctggatttaaccaacgtgtgtatgccatcattgcctttatctcttcaatacttgaagaagcttcaaactttgtgtttagatagctgcgtgttgggagacgtcactctactggggcagctaaatagcttggaaattcttagctttttagcatccgatcttaaacaattgcctacacaaataggacaattgacttgtcttcggttgttggatttatccgagtgttctcaacttgaagtgatttcaccaaatgtcatatcaagcttggagagattggaagatttgagaatgagaaacagctttaacaaatgggaggttgaaggtgaaaatagtaatgcaagcctgtctgagctaaagcacttgtctcagctatccgcactagaagtacatattccgaatgctgacattcttccaacaaacttgttctccgacaagttggagagattcaatatttttataggggacgcgtgggatgcaagatattcctgggagaaacctatggctgaagtgactcttaacacactgaaactcaagctcactaacaacaatattacgggattagatgaaggcctaaaatcgttgctgaagagatctgaggacttgtccttggatgagagtgttattaatattgtccagcaattggataccaaagattttgagaatgtgaaacatctccgactccaaaacaatattgactttacagatatcattaatagaaaggctgtattcccaaatctagtaaccttggaggtgcatggatgtgataattcaagatttttgttctcattttccacggctaaaaattttatactacttaaacacctgaaaatatctacatgtgaacttctgcaagagattgtgtcatcaacaagagaatgcgctgaagaaaatatagatgatgtgttttctaaacttaacactttgaaactcgaagcacttccaaaccttattagatttggcacaggaaattatattgaatttccggtcttggaagaattggagatagatgattgtgttaaattggtggaattcattggatatattgattaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

865

Amino Acids

98.24

Weight (kDa)

5.16

Isoelectric Point (pI)

39.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 825
AatII GACGTC 1 cut(s) 1653
AccB7I CCANNNNNTGG 1 cut(s) 2188
AccI GTMKAC 1 cut(s) 829
AccII CGCG 2 cut(s) 894, 2015
AciI CCGC 3 cut(s) 1101, 1537, 1923
AclWI GGATC 1 cut(s) 1322
AcoI YGGCCR 1 cut(s) 1373
AcsI RAATTY 8 cut(s) 192, 411, 843, 1519, 1683, 2350, 2525, 2576
AcuI CTGAAG 5 cut(s) 189, 576, 2073, 2153, 2451
AcyI GRCGYC 2 cut(s) 64, 1650
AfaI GTAC 6 cut(s) 32, 357, 993, 1421, 1487, 1935
AfiI CCNNNNNNNGG 1 cut(s) 2188
AflIII ACRYGT 3 cut(s) 1566, 2013, 2384
AhdI GACNNNNNGTC 1 cut(s) 321
AjnI CCWGG 3 cut(s) 453, 1041, 2033
Alw21I GWGCWC 1 cut(s) 1403
Alw26I GTCTC 4 cut(s) 296, 929, 1641, 1917
Alw44I GTGCAC 1 cut(s) 1399
AlwI GGATC 1 cut(s) 1322
Ama87I CYCGRG 1 cut(s) 864
AoxI GGCC 3 cut(s) 1039, 1373, 2116
ApaLI GTGCAC 1 cut(s) 1399
ApeKI GCWGC 3 cut(s) 137, 1635, 1666
ApoI RAATTY 8 cut(s) 192, 411, 843, 1519, 1683, 2350, 2525, 2576
ArsI GACNNNNNNTTYG 2 cut(s) 928, 960
AseI ATTAAT 2 cut(s) 2172, 2259
Asp700I GAANNNNTTC 3 cut(s) 192, 663, 2484
AspLEI GCGC 3 cut(s) 894, 896, 2429
AsuHPI GGTGA 5 cut(s) 197, 242, 1370, 1785, 1883
AvaI CYCGRG 1 cut(s) 864
BaeGI GKGCMC 1 cut(s) 1403
BalI TGGCCA 1 cut(s) 1375
BbsI GAAGAC 1 cut(s) 1739
Bbv12I GWGCWC 1 cut(s) 1403
BbvI GCAGC 3 cut(s) 124, 1622, 1678
BccI CCATC 4 cut(s) 491, 952, 1522, 1585
BceAI ACGGC 1 cut(s) 2358
BciT130I CCWGG 3 cut(s) 455, 1043, 2035
BciVI GTATCC 2 cut(s) 1207, 2185
BcoDI GTCTC 4 cut(s) 296, 929, 1641, 1917
BfaI CTAG 4 cut(s) 632, 1253, 1928, 2285
BfmI CTRYAG 3 cut(s) 88, 110, 717
BfuI GTATCC 2 cut(s) 1207, 2185
BglII AGATCT 1 cut(s) 2138
BisI GCNGC 3 cut(s) 138, 1636, 1667
BlpI GCTNAGC 1 cut(s) 332
BlsI GCNGC 3 cut(s) 139, 1637, 1668
Bme1390I CCNGG 3 cut(s) 455, 1043, 2035
BmeRI GACNNNNNGTC 1 cut(s) 321
BmeT110I CYCGRG 1 cut(s) 864
BmiI GGNNCC 1 cut(s) 648
BmrFI CCNGG 3 cut(s) 455, 1043, 2035
BmrI ACTGGG 2 cut(s) 68, 1670
BmsI GCATC 5 cut(s) 136, 879, 1524, 1709, 2011
BmuI ACTGGG 2 cut(s) 68, 1670
BpiI GAAGAC 1 cut(s) 1739
BpmI CTGGAG 1 cut(s) 1064
Bpu1102I GCTNAGC 1 cut(s) 332
BpuEI CTTGAG 2 cut(s) 102, 2063
BsaHI GRCGYC 2 cut(s) 64, 1650
BsaJI CCNNGG 7 cut(s) 295, 1209, 1452, 2034, 2154, 2292, 2340
BsaWI WCCGGW 2 cut(s) 443, 2530
BsaXI ACNNNNNCTCC 4 cut(s) 957, 987, 1958, 1988
Bsc4I CCNNNNNNNGG 1 cut(s) 2188
Bse1I ACTGG 6 cut(s) 63, 208, 357, 732, 1068, 1665
Bse3DI GCAATG 1 cut(s) 1580
BseBI CCWGG 3 cut(s) 455, 1043, 2035
BseDI CCNNGG 7 cut(s) 295, 1209, 1452, 2034, 2154, 2292, 2340
BseGI GGATG 9 cut(s) 502, 787, 963, 1072, 1277, 1700, 2026, 2164, 2312
BseLI CCNNNNNNNGG 1 cut(s) 2188
BseMI GCAATG 1 cut(s) 1580
BseMII CTCAG 4 cut(s) 1257, 1887, 1928, 2133
BseNI ACTGG 6 cut(s) 63, 208, 357, 732, 1068, 1665
BsePI GCGCGC 1 cut(s) 892
BseRI GAGGAG 1 cut(s) 561
BseSI GKGCMC 1 cut(s) 1403
BseXI GCAGC 3 cut(s) 124, 1622, 1678
BsgI GTGCAG 1 cut(s) 225
Bsh1236I CGCG 2 cut(s) 894, 2015
BshFI GGCC 3 cut(s) 1041, 1375, 2118
BsiHKAI GWGCWC 1 cut(s) 1403
BsiHKCI CYCGRG 1 cut(s) 864
BsiSI CCGG 2 cut(s) 444, 2531
BslFI GGGAC 4 cut(s) 75, 831, 1496, 2024
BslI CCNNNNNNNGG 1 cut(s) 2188
BsmAI GTCTC 4 cut(s) 296, 929, 1641, 1917
BsmBI CGTCTC 1 cut(s) 1641
BsmFI GGGAC 4 cut(s) 75, 831, 1496, 2024
BsmI GAATGC 4 cut(s) 1287, 1463, 1951, 2429
BsnI GGCC 3 cut(s) 1041, 1375, 2118
BsoBI CYCGRG 1 cut(s) 864
Bsp1286I GDGCHC 1 cut(s) 1403
Bsp143I GATC 7 cut(s) 234, 1057, 1288, 1314, 1327, 1705, 2138
Bsp1720I GCTNAGC 1 cut(s) 332
BspACI CCGC 3 cut(s) 1101, 1537, 1923
BspANI GGCC 3 cut(s) 1041, 1375, 2118
BspCNI CTCAG 4 cut(s) 1258, 1888, 1927, 2134
BspFNI CGCG 2 cut(s) 894, 2015
BspLI GGNNCC 1 cut(s) 648
BspMAI CTGCAG 1 cut(s) 92
BspPI GGATC 1 cut(s) 1322
BspQI GCTCTTC 1 cut(s) 721
BsrDI GCAATG 1 cut(s) 1580
BsrI ACTGG 6 cut(s) 63, 208, 357, 732, 1068, 1665
BssECI CCNNGG 7 cut(s) 295, 1209, 1452, 2034, 2154, 2292, 2340
BssHII GCGCGC 1 cut(s) 892
BssMI GATC 7 cut(s) 234, 1057, 1288, 1314, 1327, 1705, 2138
BssNI GRCGYC 2 cut(s) 64, 1650
BssT1I CCWWGG 4 cut(s) 1209, 1452, 2154, 2292
Bst2UI CCWGG 3 cut(s) 455, 1043, 2035
Bst4CI ACNGT 1 cut(s) 1490
Bst6I CTCTTC 4 cut(s) 721, 927, 1599, 2129
BstACI GRCGYC 2 cut(s) 64, 1650
BstC8I GCNNGC 4 cut(s) 588, 894, 1377, 1888
BstDEI CTNAG 6 cut(s) 332, 1266, 1688, 1896, 1914, 2142
BstDSI CCRYGG 1 cut(s) 2340
BstF5I GGATG 9 cut(s) 502, 787, 963, 1072, 1277, 1700, 2026, 2164, 2312
BstFNI CGCG 2 cut(s) 894, 2015
BstHHI GCGC 3 cut(s) 894, 896, 2429
BstKTI GATC 7 cut(s) 237, 1060, 1291, 1317, 1330, 1708, 2141
BstMAI GTCTC 4 cut(s) 296, 929, 1641, 1917
BstMBI GATC 7 cut(s) 234, 1057, 1288, 1314, 1327, 1705, 2138
BstMWI GCNNNNNNNGC 4 cut(s) 146, 1038, 1582, 2021
BstNI CCWGG 3 cut(s) 455, 1043, 2035
BstNSI RCATGY 2 cut(s) 858, 2388
BstSCI CCNGG 3 cut(s) 453, 1041, 2033
BstSFI CTRYAG 3 cut(s) 88, 110, 717
BstSLI GKGCMC 1 cut(s) 1403
BstUI CGCG 2 cut(s) 894, 2015
BstV1I GCAGC 3 cut(s) 124, 1622, 1678
BstV2I GAAGAC 1 cut(s) 1739
BstX2I RGATCY 1 cut(s) 2138
BstYI RGATCY 1 cut(s) 2138
BsuI GTATCC 2 cut(s) 1207, 2185
BsuRI GGCC 3 cut(s) 1041, 1375, 2118
BtgI CCRYGG 1 cut(s) 2340
BtsCI GGATG 9 cut(s) 502, 787, 963, 1072, 1277, 1700, 2026, 2164, 2312
BtsI GCAGTG 2 cut(s) 85, 237
BtsIMutI CAGTG 4 cut(s) 85, 237, 1194, 2069
Cac8I GCNNGC 4 cut(s) 588, 894, 1377, 1888
CfoI GCGC 3 cut(s) 894, 896, 2429
CseI GACGC 3 cut(s) 60, 72, 2021
Csp6I GTAC 6 cut(s) 31, 356, 992, 1420, 1486, 1934
CviAII CATG 7 cut(s) 493, 694, 855, 939, 1286, 2303, 2385
CviQI GTAC 6 cut(s) 31, 356, 992, 1420, 1486, 1934
DdeI CTNAG 6 cut(s) 332, 1266, 1688, 1896, 1914, 2142
DpnI GATC 7 cut(s) 236, 1059, 1290, 1316, 1329, 1707, 2140
DpnII GATC 7 cut(s) 234, 1057, 1288, 1314, 1327, 1705, 2138
DrdI GACNNNNNNGTC 1 cut(s) 825
DriI GACNNNNNGTC 1 cut(s) 321
DseDI GACNNNNNNGTC 1 cut(s) 825
EaeI YGGCCR 1 cut(s) 1373
Eam1104I CTCTTC 4 cut(s) 721, 927, 1599, 2129
Eam1105I GACNNNNNGTC 1 cut(s) 321
EarI CTCTTC 4 cut(s) 721, 927, 1599, 2129
Eco130I CCWWGG 4 cut(s) 1209, 1452, 2154, 2292
Eco147I AGGCCT 1 cut(s) 2118
Eco32I GATATC 2 cut(s) 474, 2254
Eco57I CTGAAG 5 cut(s) 189, 576, 2073, 2153, 2451
Eco88I CYCGRG 1 cut(s) 864
EcoRI GAATTC 2 cut(s) 411, 2576
EcoRII CCWGG 3 cut(s) 453, 1041, 2033
EcoRV GATATC 2 cut(s) 474, 2254
EcoT14I CCWWGG 4 cut(s) 1209, 1452, 2154, 2292
EcoT22I ATGCAT 1 cut(s) 1287
ErhI CCWWGG 4 cut(s) 1209, 1452, 2154, 2292
Esp3I CGTCTC 1 cut(s) 1641
FaeI CATG 7 cut(s) 496, 697, 858, 942, 1289, 2306, 2388
FalI AAGNNNNNCTT 4 cut(s) 1373, 1405, 2046, 2078
FaqI GGGAC 4 cut(s) 75, 831, 1496, 2024
FatI CATG 7 cut(s) 492, 693, 854, 938, 1285, 2302, 2384
FblI GTMKAC 1 cut(s) 829
Fnu4HI GCNGC 3 cut(s) 138, 1636, 1667
FokI GGATG 9 cut(s) 509, 794, 970, 1079, 1284, 1687, 2033, 2171, 2319
Fsp4HI GCNGC 3 cut(s) 138, 1636, 1667
FspBI CTAG 4 cut(s) 632, 1253, 1928, 2285
GlaI GCGC 3 cut(s) 893, 895, 2428
GluI GCNGC 3 cut(s) 138, 1636, 1667
GsuI CTGGAG 1 cut(s) 1064
HaeIII GGCC 3 cut(s) 1041, 1375, 2118
HapII CCGG 2 cut(s) 444, 2531
HgaI GACGC 3 cut(s) 60, 72, 2021
HhaI GCGC 3 cut(s) 894, 896, 2429
Hin1I GRCGYC 2 cut(s) 64, 1650
Hin1II CATG 7 cut(s) 496, 697, 858, 942, 1289, 2306, 2388
Hin6I GCGC 3 cut(s) 892, 894, 2427
HinP1I GCGC 3 cut(s) 892, 894, 2427
HindIII AAGCTT 3 cut(s) 588, 1610, 1810
HinfI GANTC 9 cut(s) 5, 341, 509, 1205, 1238, 1499, 1992, 2059, 2226
HpaII CCGG 2 cut(s) 444, 2531
HphI GGTGA 5 cut(s) 197, 242, 1370, 1785, 1883
Hpy166II GTNNAC 6 cut(s) 33, 580, 830, 992, 1401, 2390
Hpy188III TCNNGA 4 cut(s) 791, 866, 1390, 2319
Hpy8I GTNNAC 6 cut(s) 33, 580, 830, 992, 1401, 2390
HpyAV CCTTC 6 cut(s) 415, 478, 637, 1360, 1862, 2108
HpyCH4III ACNGT 1 cut(s) 1490
HpyCH4IV ACGT 2 cut(s) 1566, 1650
HpyF10VI GCNNNNNNNGC 4 cut(s) 146, 1038, 1582, 2021
HpyF3I CTNAG 6 cut(s) 332, 1266, 1688, 1896, 1914, 2142
HpySE526I ACGT 2 cut(s) 1566, 1650
Hsp92I GRCGYC 2 cut(s) 64, 1650
Hsp92II CATG 7 cut(s) 496, 697, 858, 942, 1289, 2306, 2388
HspAI GCGC 3 cut(s) 892, 894, 2427
Kzo9I GATC 7 cut(s) 234, 1057, 1288, 1314, 1327, 1705, 2138
LguI GCTCTTC 1 cut(s) 721
LmnI GCTCC 2 cut(s) 646, 1075
Lsp1109I GCAGC 3 cut(s) 124, 1622, 1678
LweI GCATC 5 cut(s) 136, 879, 1524, 1709, 2011
MaeI CTAG 4 cut(s) 632, 1253, 1928, 2285
MaeII ACGT 2 cut(s) 1566, 1650
MaeIII GTNAC 6 cut(s) 436, 850, 1052, 1651, 2056, 2287
MalI GATC 7 cut(s) 236, 1059, 1290, 1316, 1329, 1707, 2140
MboI GATC 7 cut(s) 234, 1057, 1288, 1314, 1327, 1705, 2138
MfeI CAATTG 5 cut(s) 36, 477, 1715, 1736, 2186
MflI RGATCY 1 cut(s) 2138
MhlI GDGCHC 1 cut(s) 1403
MlsI TGGCCA 1 cut(s) 1375
MluI ACGCGT 1 cut(s) 2013
MluNI TGGCCA 1 cut(s) 1375
MlyI GAGTC 3 cut(s) 1493, 2053, 2220
MmeI TCCRAC 6 cut(s) 703, 1737, 1965, 1985, 2001, 2248
Mox20I TGGCCA 1 cut(s) 1375
Mph1103I ATGCAT 1 cut(s) 1287
MroXI GAANNNNTTC 3 cut(s) 192, 663, 2484
MscI TGGCCA 1 cut(s) 1375
MslI CAYNNNNRTG 1 cut(s) 2307
Msp20I TGGCCA 1 cut(s) 1375
MspI CCGG 2 cut(s) 444, 2531
MspR9I CCNGG 3 cut(s) 455, 1043, 2035
MunI CAATTG 5 cut(s) 36, 477, 1715, 1736, 2186
Mva1269I GAATGC 4 cut(s) 1287, 1463, 1951, 2429
MvaI CCWGG 3 cut(s) 455, 1043, 2035
MvnI CGCG 2 cut(s) 894, 2015
MwoI GCNNNNNNNGC 4 cut(s) 146, 1038, 1582, 2021
NdeII GATC 7 cut(s) 234, 1057, 1288, 1314, 1327, 1705, 2138
NlaIII CATG 7 cut(s) 496, 697, 858, 942, 1289, 2306, 2388
NlaIV GGNNCC 1 cut(s) 648
NmeAIII GCCGAG 1 cut(s) 52
NmuCI GTSAC 4 cut(s) 436, 850, 1651, 2056
NsiI ATGCAT 1 cut(s) 1287
NspI RCATGY 2 cut(s) 858, 2388
PauI GCGCGC 1 cut(s) 892
PceI AGGCCT 1 cut(s) 2118
PciI ACATGT 1 cut(s) 2384
PciSI GCTCTTC 1 cut(s) 721
PctI GAATGC 4 cut(s) 1287, 1463, 1951, 2429
PdmI GAANNNNTTC 3 cut(s) 192, 663, 2484
PfeI GAWTC 5 cut(s) 341, 509, 1205, 1238, 1992
PflMI CCANNNNNTGG 1 cut(s) 2188
PkrI GCNGC 3 cut(s) 139, 1637, 1668
PleI GAGTC 3 cut(s) 1493, 2053, 2220
PpsI GAGTC 3 cut(s) 1493, 2053, 2220
PscI ACATGT 1 cut(s) 2384
PshBI ATTAAT 2 cut(s) 2172, 2259
Psp6I CCWGG 3 cut(s) 453, 1041, 2033
PspGI CCWGG 3 cut(s) 453, 1041, 2033
PspN4I GGNNCC 1 cut(s) 648
PstI CTGCAG 1 cut(s) 92
PsuI RGATCY 1 cut(s) 2138
PteI GCGCGC 1 cut(s) 892
RsaI GTAC 6 cut(s) 32, 357, 993, 1421, 1487, 1935
RsaNI GTAC 6 cut(s) 31, 356, 992, 1420, 1486, 1934
RseI CAYNNNNRTG 1 cut(s) 2307
SapI GCTCTTC 1 cut(s) 721
SatI GCNGC 3 cut(s) 138, 1636, 1667
Sau3AI GATC 7 cut(s) 234, 1057, 1288, 1314, 1327, 1705, 2138
SchI GAGTC 3 cut(s) 1493, 2053, 2220
ScrFI CCNGG 3 cut(s) 455, 1043, 2035
SduI GDGCHC 1 cut(s) 1403
SfaNI GCATC 5 cut(s) 136, 879, 1524, 1709, 2011
SfcI CTRYAG 3 cut(s) 88, 110, 717
SmiMI CAYNNNNRTG 1 cut(s) 2307
SmlI CTYRAG 2 cut(s) 117, 2078
SmoI CTYRAG 2 cut(s) 117, 2078
SseBI AGGCCT 1 cut(s) 2118
SsiI CCGC 3 cut(s) 1101, 1537, 1923
SspI AATATT 6 cut(s) 1089, 1429, 1999, 2098, 2176, 2239
SspMI CTAG 4 cut(s) 632, 1253, 1928, 2285
StuI AGGCCT 1 cut(s) 2118
StyD4I CCNGG 3 cut(s) 453, 1041, 2033
StyI CCWWGG 4 cut(s) 1209, 1452, 2154, 2292
TaaI ACNGT 1 cut(s) 1490
TaiI ACGT 2 cut(s) 1569, 1653
TaqI TCGA 1 cut(s) 2478
TatI WGTACW 2 cut(s) 30, 1933
TfiI GAWTC 5 cut(s) 341, 509, 1205, 1238, 1992
TscAI CASTG 4 cut(s) 92, 244, 1194, 2076
TseFI GTSAC 4 cut(s) 436, 850, 1651, 2056
TseI GCWGC 3 cut(s) 137, 1635, 1666
Tsp45I GTSAC 4 cut(s) 436, 850, 1651, 2056
TspDTI ATGAA 5 cut(s) 267, 393, 726, 2127, 2569
TspRI CASTG 4 cut(s) 92, 244, 1194, 2076
Van91I CCANNNNNTGG 1 cut(s) 2188
VneI GTGCAC 1 cut(s) 1399
VspI ATTAAT 2 cut(s) 2172, 2259
XapI RAATTY 8 cut(s) 192, 411, 843, 1519, 1683, 2350, 2525, 2576
XceI RCATGY 2 cut(s) 858, 2388
XcmI CCANNNNNNNNNTGG 1 cut(s) 404
XmiI GTMKAC 1 cut(s) 829
XmnI GAANNNNTTC 3 cut(s) 192, 663, 2484
XspI CTAG 4 cut(s) 632, 1253, 1928, 2285
ZraI GACGTC 1 cut(s) 1651
Zsp2I ATGCAT 1 cut(s) 1287
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.