pycom09g18310

disease resistance

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
Physical Location & Seq
Reverse (-)
18928461 .. 18931406
2946 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g18310.1

Sequence Viewer

Length: 2742 bp
ATGCAGATTTCTCTAAAAGCAAAAGAAAACAAAAAGATTTGCATACTGCGCTGTTTTTCTTCATGTGCCATGGCGATGGAGATAATCACTGCCATTATTCCTACAATAATTGACTACACAGTTAGACCACTTGGACGGCAAGTGAGTTATGTCATTTTCTACAAAAGCAACCTTAAAGATCTAAGGAGTAGATTGAAGAATTTTGATGCTGCCAAACAAAGGATGAACCATGCGGTTGAAGAAGTCGAAAGAAAAGTTAATCAAAAAGTGGAAGCTGATGTCTGGAACTGGCAGACAGAAGCGGATCAGATCTCTCGAGAGGTAGAAGCATTATTGGATGATGAAGGCCGTGCAGAGACAAGGTGTCTCTATATATGTCCTCACCTGATATCCTATCATCAGCTCAGCAGAAAATCAACTAAATTGGTGAGAAAGATTGAAGAACATGAAAATAAAAAAGAGTTTGCCAGTATTTCTTACAATGCTGCCGTGGAAGACATATCTGCCATAGCCTCTGACGAGTACATGGCCTTTGAATCAAGGACTTCAATGGTGAAGGATATCATTACAGAACTGGAAAAACCTGATATCAACAGGATTGGTGTGTACAGATTAGGGGGCGTTGGGAAGACAACACTTGCCAAAGAGGTTTACAGAAAAGTTGTGGAAGAGAATTTATTTGATGATGTGGTTATAATTCTAAATGTAAAAGAAAAGAAAGACGATGAAACAATTCAAAAGGAAATTACCAAAAAGTTGAGGATGGACGTTGATGATTCCGAGGATATGGGAACAAGGGCGAATCTCCTACGGGCCAGGATAAAAGATGGGAAGACTCTTGTCATTTTAGACGATGTATTGAAAAGAACTGACTTTGAGGTTGTGGGACTTGTCGGTGTATCGAACTTGAAGTTATTGTTGACATCTAGAGAAAGAAAAGTTTTATTCTCTGATATGCGTACGCAAAAAGAATTTCGACTTGGGTTTTTAACAGAAAAAGAAAGTTGGAGTTTGTTTGAGAAGATGGCAGGTAATGTCGTGAAAGACAACCGTATACTGAAAGAAGCAACCCAACTAGCAAAGAAATGTGGAGGTTTGCCGGTTTTGGTTGTTGCAGTTGCAAGTGCTTTAAGGGATAGTAGTTTGGAGGAATGGAAAGATGCATTGAGAAGTTTCAAAAGATTTGACAAGAAGGAATTCAATGAAAAAGCATTCTTGGCTCTAGAGTGGAGTTACAAACAATTGGAGGATCAAGAGCTTCAACAATTGTTCTTGATTTGCGGAATTCTTGCCGGGGGTTCGATGTCTATAAGTCTTTGCAGTGACTTGTTGAAGTATAGTATGGGTTTGGGCTTGATAAAAAATGTTGAGACAGTGGAACAGTCACGGGTTTCATTGAATTTAATGATTAAAAAACTAAAAAATTCTTGCCTATTGCTGGACAGTTATGAAGATGGGACTGTTAGGATGCACGAGCTTGTTCGAGATGCTGCTATCTGGATTGCATCTGATGATCAAAAGGCGTTTTTAAAAGTATATGGAGATGAGGTCAAAGAATGGCCCACTGAGGATTTATGTAAGAAGTACACCGCCATCTCCTTGAGGTTTTGCAAAATCCCCAGATTTCCTGAAGTACCTTGGGTATGCCCTGAATTAAAATTGTTGGTCTTGGAGAATGATAATATTGGCGACTCCCAGGAAATCCCAAGCAAATTTTTTGAAGGGATGAAAGAACTCAAAGTGTTGGATGTAACCAGATTCCGTATTCAGTCGCTACCTCCATCTCTTGAATCCCTAAAGCATCTCCACACATTGGGTTTATATGACTGCGACTTGGTAGATATAACTCTTGTTGGACAGCTAACAAACTTGAGAATCCTTAGCGTGATAGAGTCCAGGATTAAAGAGTTTCCTGAACAAATAGGACAATTGACTCGTCTACAATTATTGGATTTGTCCGATTGCTCTGAACTTGTTATGATCTCACCTAATGTTATATCAAGCTTGACAAGACTAGAAGACTTGAGGATGGGAATAAGAAGCTTCAAGCTGTGGGAAGGTGAAGGTTTGGTCGATGGCAGAAAAATTAATGCTAGCGTTTCAGAGCTGAAGCACTTATCTCATCTATCCGCATTGGACATACACATTCCAGATGCTAACCTTCTTCCAACCAACTTGTTCTCCGATAAGTTAGAAAGATACACCATACTTGTTGGTGATTGTTGGGAATATCCTGTCTTCGATGAAACCTCCTCTAACATGCTAAAACTCAAGCTCACCAGGAGTAATCAATTCGATCGGGGTATAAAGTTGCTGGTAAAGAGATGTGAGCAATTGTACTTGGATGGGGTAGAGATTATGAATATTATTTCCTATCTGTTTGACAGTGAAGCTGTTAATCAACTGAAGCATCTCCACGTCCAAAACAACGACGAAGTCACATATGTCATTAACTTCGTTAGTTGGAGTTATTCTCATAATGCCTTCTCTTGCTTGAAATTTCTATCTCTTGAAAACCTTGTGAGTTTGGAAAGCGTATGTTATGGGCAACTCATAAGTGACCATTTCCAAAAGTTAAAATCTTTGACACTACGGAATTTACCAAAGCTTATTGGTTTCTCTTCCAATGGCAAGCAATTAACGAATGATACAAATGCCGACAAAATCGTGTTGGAGGATGAAGTTGGTGGACCACCGAAACTGTTCAGTAATGCGAAGGTACTTTCTCTATCATTTTTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

914

Amino Acids

104.35

Weight (kDa)

6.1

Isoelectric Point (pI)

33.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 182 - 344 4e-24 NB-ARC domain
LRR_14 PF23598 599 - 718 1.7e-09 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 695
Acc36I ACCTGC 1 cut(s) 1019
AccB7I CCANNNNNTGG 1 cut(s) 1813
AccI GTMKAC 2 cut(s) 1054, 1939
AciI CCGC 5 cut(s) 233, 302, 1281, 1590, 2130
AclWI GGATC 2 cut(s) 312, 1257
AcuI CTGAAG 3 cut(s) 1650, 2129, 2426
AfaI GTAC 7 cut(s) 524, 608, 961, 1586, 1635, 2339, 2721
AfiI CCNNNNNNNGG 3 cut(s) 219, 1438, 1813
AhdI GACNNNNNGTC 1 cut(s) 363
AjiI CACGTC 1 cut(s) 2419
AjnI CCWGG 4 cut(s) 815, 1695, 1895, 2279
AjuI GAANNNNNNNTTGG 2 cut(s) 963, 995
Alw26I GTCTC 3 cut(s) 350, 371, 1364
AlwI GGATC 2 cut(s) 312, 1257
Ama87I CYCGRG 1 cut(s) 315
AoxI GGCC 4 cut(s) 346, 528, 813, 1559
ApeKI GCWGC 3 cut(s) 209, 485, 1490
AseI ATTAAT 1 cut(s) 2088
Asp700I GAANNNNTTC 3 cut(s) 732, 1196, 2702
AspLEI GCGC 1 cut(s) 51
AspS9I GGNCC 3 cut(s) 813, 1560, 2690
AsuC2I CCSGG 1 cut(s) 1294
AsuHPI GGTGA 7 cut(s) 374, 439, 565, 1977, 2072, 2228, 2269
AsuNHI GCTAGC 1 cut(s) 2093
AvaI CYCGRG 1 cut(s) 315
AvaII GGWCC 1 cut(s) 2690
BauI CACGAG 1 cut(s) 1472
BbsI GAAGAC 5 cut(s) 501, 635, 839, 2025, 2230
BbvI GCAGC 3 cut(s) 196, 472, 1477
BceAI ACGGC 3 cut(s) 152, 333, 473
BciT130I CCWGG 4 cut(s) 817, 1697, 1897, 2281
BclI TGATCA 1 cut(s) 1513
BcnI CCSGG 1 cut(s) 1294
BcoDI GTCTC 3 cut(s) 350, 371, 1364
BfaI CTAG 5 cut(s) 927, 1076, 1223, 2015, 2094
BfuAI ACCTGC 1 cut(s) 1019
BglII AGATCT 2 cut(s) 178, 309
BisI GCNGC 3 cut(s) 210, 486, 1491
BlpI GCTNAGC 1 cut(s) 404
BlsI GCNGC 3 cut(s) 211, 487, 1492
Bme1390I CCNGG 5 cut(s) 817, 1294, 1697, 1897, 2281
Bme18I GGWCC 1 cut(s) 2690
BmeRI GACNNNNNGTC 1 cut(s) 363
BmeT110I CYCGRG 1 cut(s) 315
BmgBI CACGTC 1 cut(s) 2419
BmgT120I GGNCC 3 cut(s) 813, 1560, 2690
BmrFI CCNGG 5 cut(s) 817, 1294, 1697, 1897, 2281
BmsI GCATC 8 cut(s) 196, 1150, 1458, 1477, 1514, 1810, 2143, 2419
BmtI GCTAGC 1 cut(s) 2097
BoxI GACNNNNGTC 1 cut(s) 839
BpiI GAAGAC 5 cut(s) 501, 635, 839, 2025, 2230
BplI GAGNNNNNCTC 2 cut(s) 2458, 2490
Bpu10I CCTNAGC 1 cut(s) 1880
Bpu1102I GCTNAGC 1 cut(s) 404
BpuEI CTTGAG 4 cut(s) 1621, 1891, 2044, 2255
BpuMI CCSGG 1 cut(s) 1294
BsaJI CCNNGG 6 cut(s) 69, 489, 780, 1293, 1637, 1695
BsaXI ACNNNNNCTCC 4 cut(s) 1533, 1563, 2165, 2195
Bsc4I CCNNNNNNNGG 3 cut(s) 219, 1438, 1813
Bse118I RCCGGY 1 cut(s) 1099
Bse1I ACTGG 3 cut(s) 293, 468, 579
BseBI CCWGG 4 cut(s) 817, 1697, 1897, 2281
BseDI CCNNGG 6 cut(s) 69, 489, 780, 1293, 1637, 1695
BseGI GGATG 9 cut(s) 228, 343, 768, 1473, 1731, 1753, 2034, 2350, 2683
BseLI CCNNNNNNNGG 3 cut(s) 219, 1438, 1813
BseMII CTCAG 2 cut(s) 418, 1557
BseNI ACTGG 3 cut(s) 293, 468, 579
BseRI GAGGAG 1 cut(s) 2242
BseXI GCAGC 3 cut(s) 196, 472, 1477
BsgI GTGCAG 1 cut(s) 372
Bsh1285I CGRYCG 1 cut(s) 2299
BshFI GGCC 4 cut(s) 348, 530, 815, 1561
BsiEI CGRYCG 1 cut(s) 2299
BsiHKCI CYCGRG 1 cut(s) 315
BsiSI CCGG 2 cut(s) 1100, 1293
BsiWI CGTACG 1 cut(s) 959
BslFI GGGAC 2 cut(s) 900, 1471
BslI CCNNNNNNNGG 3 cut(s) 219, 1438, 1813
BsmAI GTCTC 3 cut(s) 350, 371, 1364
BsmFI GGGAC 2 cut(s) 900, 1471
BsmI GAATGC 1 cut(s) 1211
BsnI GGCC 4 cut(s) 348, 530, 815, 1561
BsoBI CYCGRG 1 cut(s) 315
Bsp1407I TGTACA 1 cut(s) 606
Bsp143I GATC 7 cut(s) 178, 304, 309, 1249, 1513, 1980, 2296
Bsp1720I GCTNAGC 1 cut(s) 404
Bsp19I CCATGG 1 cut(s) 69
BspACI CCGC 5 cut(s) 233, 302, 1281, 1590, 2130
BspANI GGCC 4 cut(s) 348, 530, 815, 1561
BspCNI CTCAG 2 cut(s) 417, 1558
BspMI ACCTGC 1 cut(s) 1019
BspOI GCTAGC 1 cut(s) 2097
BspPI GGATC 2 cut(s) 312, 1257
BsrFI RCCGGY 1 cut(s) 1099
BsrGI TGTACA 1 cut(s) 606
BsrI ACTGG 3 cut(s) 293, 468, 579
BssAI RCCGGY 1 cut(s) 1099
BssECI CCNNGG 6 cut(s) 69, 489, 780, 1293, 1637, 1695
BssMI GATC 7 cut(s) 178, 304, 309, 1249, 1513, 1980, 2296
BssNAI GTATAC 1 cut(s) 1055
BssSI CACGAG 1 cut(s) 1472
BssT1I CCWWGG 2 cut(s) 69, 1637
Bst1107I GTATAC 1 cut(s) 1055
Bst2BI CACGAG 1 cut(s) 1472
Bst2UI CCWGG 4 cut(s) 817, 1697, 1897, 2281
Bst4CI ACNGT 8 cut(s) 121, 1052, 1375, 1383, 1445, 1462, 2387, 2703
Bst6I CTCTTC 2 cut(s) 663, 2626
BstAUI TGTACA 1 cut(s) 606
BstC8I GCNNGC 2 cut(s) 2095, 2633
BstDEI CTNAG 4 cut(s) 182, 404, 1566, 1880
BstDSI CCRYGG 2 cut(s) 69, 489
BstF5I GGATG 9 cut(s) 228, 343, 768, 1473, 1731, 1753, 2034, 2350, 2683
BstHHI GCGC 1 cut(s) 51
BstKTI GATC 7 cut(s) 181, 307, 312, 1252, 1516, 1983, 2299
BstMAI GTCTC 3 cut(s) 350, 371, 1364
BstMBI GATC 7 cut(s) 178, 304, 309, 1249, 1513, 1980, 2296
BstMCI CGRYCG 1 cut(s) 2299
BstMWI GCNNNNNNNGC 2 cut(s) 48, 1217
BstNI CCWGG 4 cut(s) 817, 1697, 1897, 2281
BstNSI RCATGY 1 cut(s) 2263
BstPAI GACNNNNGTC 1 cut(s) 839
BstSCI CCNGG 5 cut(s) 815, 1292, 1695, 1895, 2279
BstV1I GCAGC 3 cut(s) 196, 472, 1477
BstV2I GAAGAC 5 cut(s) 501, 635, 839, 2025, 2230
BstX2I RGATCY 2 cut(s) 178, 309
BstXI CCANNNNNNTGG 1 cut(s) 76
BstYI RGATCY 2 cut(s) 178, 309
BstZ17I GTATAC 1 cut(s) 1055
BsuRI GGCC 4 cut(s) 348, 530, 815, 1561
BtgI CCRYGG 2 cut(s) 69, 489
BtgZI GCGATG 1 cut(s) 89
BtrI CACGTC 1 cut(s) 2419
BtsCI GGATG 9 cut(s) 228, 343, 768, 1473, 1731, 1753, 2034, 2350, 2683
BtsI GCAGTG 2 cut(s) 87, 1327
BtsIMutI CAGTG 5 cut(s) 87, 1327, 1380, 1563, 2392
BveI ACCTGC 1 cut(s) 1019
Cac8I GCNNGC 2 cut(s) 2095, 2633
CfoI GCGC 1 cut(s) 51
Cfr10I RCCGGY 1 cut(s) 1099
Cfr13I GGNCC 3 cut(s) 813, 1560, 2690
Csp6I GTAC 7 cut(s) 523, 607, 960, 1585, 1634, 2338, 2720
CviAII CATG 6 cut(s) 63, 70, 230, 446, 526, 2260
CviQI GTAC 7 cut(s) 523, 607, 960, 1585, 1634, 2338, 2720
DdeI CTNAG 4 cut(s) 182, 404, 1566, 1880
DpnI GATC 7 cut(s) 180, 306, 311, 1251, 1515, 1982, 2298
DpnII GATC 7 cut(s) 178, 304, 309, 1249, 1513, 1980, 2296
DraI TTTAAA 1 cut(s) 1530
DriI GACNNNNNGTC 1 cut(s) 363
Eam1104I CTCTTC 2 cut(s) 663, 2626
Eam1105I GACNNNNNGTC 1 cut(s) 363
EarI CTCTTC 2 cut(s) 663, 2626
Eco130I CCWWGG 2 cut(s) 69, 1637
Eco32I GATATC 3 cut(s) 390, 562, 589
Eco47I GGWCC 1 cut(s) 2690
Eco57I CTGAAG 3 cut(s) 1650, 2129, 2426
Eco88I CYCGRG 1 cut(s) 315
EcoRI GAATTC 2 cut(s) 1196, 1284
EcoRII CCWGG 4 cut(s) 815, 1695, 1895, 2279
EcoRV GATATC 3 cut(s) 390, 562, 589
EcoT14I CCWWGG 2 cut(s) 69, 1637
EcoT22I ATGCAT 1 cut(s) 1165
ErhI CCWWGG 2 cut(s) 69, 1637
FaeI CATG 6 cut(s) 66, 73, 233, 449, 529, 2263
FaqI GGGAC 2 cut(s) 900, 1471
FatI CATG 6 cut(s) 62, 69, 229, 445, 525, 2259
FauNDI CATATG 1 cut(s) 2443
FbaI TGATCA 1 cut(s) 1513
FblI GTMKAC 2 cut(s) 1054, 1939
Fnu4HI GCNGC 3 cut(s) 210, 486, 1491
FokI GGATG 9 cut(s) 235, 350, 775, 1480, 1738, 1760, 2041, 2357, 2690
Fsp4HI GCNGC 3 cut(s) 210, 486, 1491
FspBI CTAG 5 cut(s) 927, 1076, 1223, 2015, 2094
GlaI GCGC 1 cut(s) 50
GluI GCNGC 3 cut(s) 210, 486, 1491
HaeIII GGCC 4 cut(s) 348, 530, 815, 1561
HapII CCGG 2 cut(s) 1100, 1293
HhaI GCGC 1 cut(s) 51
Hin1II CATG 6 cut(s) 66, 73, 233, 449, 529, 2263
Hin6I GCGC 1 cut(s) 49
HinP1I GCGC 1 cut(s) 49
HincII GTYRAC 1 cut(s) 921
HindII GTYRAC 1 cut(s) 921
HindIII AAGCTT 3 cut(s) 2002, 2041, 2606
HpaII CCGG 2 cut(s) 1100, 1293
HphI GGTGA 7 cut(s) 374, 439, 565, 1977, 2072, 2228, 2269
Hpy166II GTNNAC 7 cut(s) 607, 652, 921, 1055, 1587, 1940, 2690
Hpy188I TCNGA 9 cut(s) 309, 517, 781, 952, 1510, 1960, 1969, 2104, 2185
Hpy8I GTNNAC 7 cut(s) 607, 652, 921, 1055, 1587, 1940, 2690
Hpy99I CGWCG 1 cut(s) 2435
HpyAV CCTTC 9 cut(s) 338, 550, 1186, 1715, 2051, 2057, 2171, 2494, 2710
HpyCH4III ACNGT 8 cut(s) 121, 1052, 1375, 1383, 1445, 1462, 2387, 2703
HpyCH4IV ACGT 2 cut(s) 768, 2418
HpyF10VI GCNNNNNNNGC 2 cut(s) 48, 1217
HpyF3I CTNAG 4 cut(s) 182, 404, 1566, 1880
HpySE526I ACGT 2 cut(s) 768, 2418
Hsp92II CATG 6 cut(s) 66, 73, 233, 449, 529, 2263
HspAI GCGC 1 cut(s) 49
Ksp22I TGATCA 1 cut(s) 1513
Kzo9I GATC 7 cut(s) 178, 304, 309, 1249, 1513, 1980, 2296
Lsp1109I GCAGC 3 cut(s) 196, 472, 1477
LweI GCATC 8 cut(s) 196, 1150, 1458, 1477, 1514, 1810, 2143, 2419
MaeI CTAG 5 cut(s) 927, 1076, 1223, 2015, 2094
MaeII ACGT 2 cut(s) 768, 2418
MaeIII GTNAC 6 cut(s) 1232, 1322, 1383, 1750, 2437, 2558
MalI GATC 7 cut(s) 180, 306, 311, 1251, 1515, 1982, 2298
MboI GATC 7 cut(s) 178, 304, 309, 1249, 1513, 1980, 2296
MfeI CAATTG 4 cut(s) 1241, 1265, 1928, 2333
MflI RGATCY 2 cut(s) 178, 309
MlyI GAGTC 4 cut(s) 829, 1685, 1901, 1927
MmeI TCCRAC 6 cut(s) 986, 1725, 1834, 2192, 2444, 2652
Mph1103I ATGCAT 1 cut(s) 1165
MroXI GAANNNNTTC 3 cut(s) 732, 1196, 2702
MslI CAYNNNNRTG 1 cut(s) 74
MspI CCGG 2 cut(s) 1100, 1293
MspR9I CCNGG 5 cut(s) 817, 1294, 1697, 1897, 2281
MunI CAATTG 4 cut(s) 1241, 1265, 1928, 2333
Mva1269I GAATGC 1 cut(s) 1211
MvaI CCWGG 4 cut(s) 817, 1697, 1897, 2281
MwoI GCNNNNNNNGC 2 cut(s) 48, 1217
NciI CCSGG 1 cut(s) 1294
NcoI CCATGG 1 cut(s) 69
NdeI CATATG 1 cut(s) 2443
NdeII GATC 7 cut(s) 178, 304, 309, 1249, 1513, 1980, 2296
NheI GCTAGC 1 cut(s) 2093
NlaIII CATG 6 cut(s) 66, 73, 233, 449, 529, 2263
NmuCI GTSAC 4 cut(s) 1322, 1383, 2437, 2558
NsiI ATGCAT 1 cut(s) 1165
NspI RCATGY 1 cut(s) 2263
PaeR7I CTCGAG 1 cut(s) 315
PctI GAATGC 1 cut(s) 1211
PdmI GAANNNNTTC 3 cut(s) 732, 1196, 2702
PfeI GAWTC 6 cut(s) 536, 776, 802, 1758, 1790, 1875
Pfl23II CGTACG 1 cut(s) 959
PflFI GACNNNGTC 1 cut(s) 2435
PflMI CCANNNNNTGG 1 cut(s) 1813
PfoI TCCNGGA 1 cut(s) 1895
PkrI GCNGC 3 cut(s) 211, 487, 1492
Ple19I CGATCG 1 cut(s) 2299
PleI GAGTC 4 cut(s) 829, 1685, 1900, 1927
PpsI GAGTC 4 cut(s) 829, 1685, 1900, 1927
PshAI GACNNNNGTC 1 cut(s) 839
PshBI ATTAAT 1 cut(s) 2088
PsiI TTATAA 1 cut(s) 695
Psp6I CCWGG 4 cut(s) 815, 1695, 1895, 2279
PspGI CCWGG 4 cut(s) 815, 1695, 1895, 2279
PspLI CGTACG 1 cut(s) 959
PspPI GGNCC 3 cut(s) 813, 1560, 2690
PsuI RGATCY 2 cut(s) 178, 309
PsyI GACNNNGTC 1 cut(s) 2435
PvuI CGATCG 1 cut(s) 2299
RsaI GTAC 7 cut(s) 524, 608, 961, 1586, 1635, 2339, 2721
RsaNI GTAC 7 cut(s) 523, 607, 960, 1585, 1634, 2338, 2720
RseI CAYNNNNRTG 1 cut(s) 74
SatI GCNGC 3 cut(s) 210, 486, 1491
Sau3AI GATC 7 cut(s) 178, 304, 309, 1249, 1513, 1980, 2296
Sau96I GGNCC 3 cut(s) 813, 1560, 2690
SchI GAGTC 4 cut(s) 829, 1685, 1901, 1927
ScrFI CCNGG 5 cut(s) 817, 1294, 1697, 1897, 2281
SfaNI GCATC 8 cut(s) 196, 1150, 1458, 1477, 1514, 1810, 2143, 2419
Sfr274I CTCGAG 1 cut(s) 315
SinI GGWCC 1 cut(s) 2690
SlaI CTCGAG 1 cut(s) 315
SmiMI CAYNNNNRTG 1 cut(s) 74
SmlI CTYRAG 5 cut(s) 315, 1600, 1870, 2023, 2270
SmoI CTYRAG 5 cut(s) 315, 1600, 1870, 2023, 2270
SsiI CCGC 5 cut(s) 233, 302, 1281, 1590, 2130
SspI AATATT 2 cut(s) 1684, 2365
SspMI CTAG 5 cut(s) 927, 1076, 1223, 2015, 2094
StyD4I CCNGG 5 cut(s) 815, 1292, 1695, 1895, 2279
StyI CCWWGG 2 cut(s) 69, 1637
TaaI ACNGT 8 cut(s) 121, 1052, 1375, 1383, 1445, 1462, 2387, 2703
TaiI ACGT 2 cut(s) 771, 2421
TaqI TCGA 9 cut(s) 246, 316, 902, 976, 1301, 1483, 2073, 2241, 2295
TatI WGTACW 4 cut(s) 522, 606, 1584, 2337
TfiI GAWTC 6 cut(s) 536, 776, 802, 1758, 1790, 1875
TscAI CASTG 5 cut(s) 94, 1327, 1380, 1570, 2392
TseFI GTSAC 4 cut(s) 1322, 1383, 2437, 2558
TseI GCWGC 3 cut(s) 209, 485, 1490
Tsp45I GTSAC 4 cut(s) 1322, 1383, 2437, 2558
TspGWI ACGGA 2 cut(s) 1751, 2608
TspRI CASTG 5 cut(s) 94, 1327, 1380, 1570, 2392
Tth111I GACNNNGTC 1 cut(s) 2435
Van91I CCANNNNNTGG 1 cut(s) 1813
VpaK11BI GGWCC 1 cut(s) 2690
VspI ATTAAT 1 cut(s) 2088
XbaI TCTAGA 2 cut(s) 926, 1222
XceI RCATGY 1 cut(s) 2263
XhoI CTCGAG 1 cut(s) 315
XmiI GTMKAC 2 cut(s) 1054, 1939
XmnI GAANNNNTTC 3 cut(s) 732, 1196, 2702
XspI CTAG 5 cut(s) 927, 1076, 1223, 2015, 2094
Zsp2I ATGCAT 1 cut(s) 1165
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.