RchiOBHm_Chr2g0085071

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000042
Physical Location & Seq
Forward (+)
671556 .. 673029
1474 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ46063

Sequence Viewer

Length: 1386 bp
ATGGATGAGTTGAAGAATCCTAATACCATCAGGATCGGGGTGTGCGGAATTGCGGGTGTGGGAAAAACCACGCTTGCAAAAGCAGTTCATAAGCAAGCTACAGAAGATAAAGAGTTATTTGATGATGTGGTTATCCTACTAGACGTGAAAAGCAATACAGACTTGGAAGGAATTCAAAAGAAAATTGTTGAGAAGTTGGGCATGGACATTCTTGACAATGACACCATCGATGGAAGAGCCAGTCGTTTAAGTGCCCGGATAAAGGACAAAAAGGTGCTTGTAATTCTAGATGATGTTTGTGAACAAATTGACTTAGTGGCTGTCGGACTTCCTAGCGTGGCTGCTTGTAAGATATTGCTGACATCTAGATTTAGGAAGACATTATCTGATATGAGTACGCAGAAAGAGTTTCTGCTTGACATTTTACAAGAAAAAGAGTCCTGGGTATTATTTGAGAAGAAGGCACTCGATGTTGTTAAGGATCCAGCTATACTAGAAGTAGCAAAACAAGTTGCCAAAAATTGTGGTGGTCTGCCTATTTTGGTGGTCACAGTGGCAAGTGTTTTAAAGCAAAGAACTACGTTACCTCCGTGGACAGATGCTTTGACATGCTTGCAGGAAGGGTCTGATAGAGAAGAAGAATTGGCAGAAAAGGCACACTTGGGTCTAGAGTGGAGTTACAAACAGTTGAATGATAAGGAACTAAAGCAAATATTCTTGCTATGTGGCATTACTATACGGGGAAACAGTATTAGTTTGGCAGACTTGTTGAGGTATAGTATGGGTTTAGGTTTCTTGAAAAAGGCCTTCACAGTGGAGGAAGCACGAAAGGCATTGCTTTCACGAATTGAAAAGCTCAAAGATTATTGTCTACTTATAGAGAGTGATGACAACAGATATGTTCGAATGCATGAGCTTGTACTCAATGTTGCTAACCAGATTGCATTCAGAGATCGACACATCTTATCATTAGTGGAAGATGGAGGTAACCGTGAGTTGAAAGAATTGTCAGATAAGTATTTTTTAGAGAAATGCACAATCATGTCTTTCCCCTGTGGCAACAATATCCCAAGGCTTCCTGAAGTTATGCACTGCCCCACTCTGACAATGTTTCATTTGCAAGGTGACCTAGATGATGACTCGCAGAAAATCTCGCCTAGGTTTTTTGAAAAGATGAAAAATCTCCAAGTGCTGAGTTTGCGATGTATGACTATTCCAACACTACCTTTGTCTCTTCAGTTCCTGAAAAATCTAGTTTTCCTATGTTTAGATCAGTGCATATTGGGAGATGTCGCTTTAATTGGGGAGCTGAGTAACTTGGAAATTCTTTCGTTTTCAGAATCCAATGTCAAACAATTGCCTACAGCAGGAGACTGGAAGAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

461

Amino Acids

51.76

Weight (kDa)

5.63

Isoelectric Point (pI)

40.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 7 - 156 2.3e-24 NB-ARC domain
AAA_22 PF13401 14 - 99 3.8e-07 AAA domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 871
AciI CCGC 2 cut(s) 45, 53
AclWI GGATC 3 cut(s) 41, 476, 489
AcsI RAATTY 2 cut(s) 171, 1323
AcuI CTGAAG 2 cut(s) 1101, 1220
AfaI GTAC 2 cut(s) 397, 921
AfiI CCNNNNNNNGG 2 cut(s) 262, 1367
AgsI TTSAA 7 cut(s) 13, 176, 691, 799, 851, 1000, 1169
AjiI CACGTC 1 cut(s) 145
AjnI CCWGG 1 cut(s) 440
AluBI AGCT 5 cut(s) 98, 488, 856, 916, 1309
AluI AGCT 5 cut(s) 98, 488, 856, 916, 1309
Alw26I GTCTC 2 cut(s) 1236, 1365
AlwI GGATC 3 cut(s) 41, 476, 489
AlwNI CAGNNNCTG 1 cut(s) 1243
AoxI GGCC 1 cut(s) 804
ApeKI GCWGC 1 cut(s) 341
ApoI RAATTY 2 cut(s) 171, 1323
ArsI GACNNNNNNTTYG 2 cut(s) 586, 618
Asp700I GAANNNNTTC 1 cut(s) 171
AspA2I CCTAGG 1 cut(s) 1157
AsuC2I CCSGG 1 cut(s) 256
AsuHPI GGTGA 1 cut(s) 1136
AsuII TTCGAA 1 cut(s) 904
AvrII CCTAGG 1 cut(s) 1157
BaeGI GKGCMC 1 cut(s) 256
BamHI GGATCC 1 cut(s) 481
BbsI GAAGAC 1 cut(s) 383
BbvI GCAGC 1 cut(s) 328
BccI CCATC 4 cut(s) 35, 224, 233, 974
BciT130I CCWGG 1 cut(s) 442
BcnI CCSGG 1 cut(s) 256
BcoDI GTCTC 2 cut(s) 1236, 1365
BfaI CTAG 9 cut(s) 140, 287, 333, 366, 494, 668, 1130, 1158, 1253
BfmI CTRYAG 2 cut(s) 99, 1362
BisI GCNGC 1 cut(s) 342
BlnI CCTAGG 1 cut(s) 1157
BlsI GCNGC 1 cut(s) 343
Bme1390I CCNGG 2 cut(s) 256, 442
BmgBI CACGTC 1 cut(s) 145
BmiI GGNNCC 1 cut(s) 483
BmrFI CCNGG 2 cut(s) 256, 442
BmsI GCATC 1 cut(s) 589
BpiI GAAGAC 1 cut(s) 383
Bpu14I TTCGAA 1 cut(s) 904
BpuMI CCSGG 1 cut(s) 256
Bsa29I ATCGAT 1 cut(s) 228
BsaJI CCNNGG 4 cut(s) 441, 590, 1070, 1157
BsaXI ACNNNNNCTCC 2 cut(s) 571, 601
Bsc4I CCNNNNNNNGG 2 cut(s) 262, 1367
Bse1I ACTGG 2 cut(s) 240, 1379
Bse3DI GCAATG 1 cut(s) 833
BseBI CCWGG 1 cut(s) 442
BseCI ATCGAT 1 cut(s) 228
BseDI CCNNGG 4 cut(s) 441, 590, 1070, 1157
BseGI GGATG 1 cut(s) 10
BseLI CCNNNNNNNGG 2 cut(s) 262, 1367
BseMI GCAATG 1 cut(s) 833
BseMII CTCAG 2 cut(s) 1184, 1301
BseNI ACTGG 2 cut(s) 240, 1379
BseSI GKGCMC 1 cut(s) 256
BseXI GCAGC 1 cut(s) 328
BshFI GGCC 1 cut(s) 806
BshVI ATCGAT 1 cut(s) 228
BsiSI CCGG 1 cut(s) 256
BslI CCNNNNNNNGG 2 cut(s) 262, 1367
BsmAI GTCTC 2 cut(s) 1236, 1365
BsmI GAATGC 2 cut(s) 912, 944
BsnI GGCC 1 cut(s) 806
Bsp119I TTCGAA 1 cut(s) 904
Bsp1286I GDGCHC 1 cut(s) 256
Bsp143I GATC 4 cut(s) 33, 481, 952, 1270
BspACI CCGC 2 cut(s) 45, 53
BspANI GGCC 1 cut(s) 806
BspCNI CTCAG 2 cut(s) 1185, 1302
BspDI ATCGAT 1 cut(s) 228
BspLI GGNNCC 1 cut(s) 483
BspPI GGATC 3 cut(s) 41, 476, 489
BspQI GCTCTTC 1 cut(s) 229
BspT104I TTCGAA 1 cut(s) 904
BsrDI GCAATG 1 cut(s) 833
BsrI ACTGG 2 cut(s) 240, 1379
BssECI CCNNGG 4 cut(s) 441, 590, 1070, 1157
BssMI GATC 4 cut(s) 33, 481, 952, 1270
BssT1I CCWWGG 2 cut(s) 1070, 1157
Bst2UI CCWGG 1 cut(s) 442
Bst4CI ACNGT 5 cut(s) 553, 687, 749, 814, 992
Bst6I CTCTTC 3 cut(s) 229, 1239, 1373
BstBI TTCGAA 1 cut(s) 904
BstC8I GCNNGC 3 cut(s) 75, 96, 614
BstDEI CTNAG 3 cut(s) 313, 1193, 1310
BstDSI CCRYGG 1 cut(s) 590
BstEII GGTNACC 2 cut(s) 986, 1124
BstENI CCTNNNNNAGG 1 cut(s) 1365
BstF5I GGATG 1 cut(s) 10
BstKTI GATC 4 cut(s) 36, 484, 955, 1273
BstMAI GTCTC 2 cut(s) 1236, 1365
BstMBI GATC 4 cut(s) 33, 481, 952, 1270
BstMWI GCNNNNNNNGC 3 cut(s) 653, 830, 1198
BstNI CCWGG 1 cut(s) 442
BstNSI RCATGY 1 cut(s) 612
BstPI GGTNACC 2 cut(s) 986, 1124
BstSCI CCNGG 2 cut(s) 254, 440
BstSFI CTRYAG 2 cut(s) 99, 1362
BstSLI GKGCMC 1 cut(s) 256
BstV1I GCAGC 1 cut(s) 328
BstV2I GAAGAC 1 cut(s) 383
BstX2I RGATCY 1 cut(s) 481
BstYI RGATCY 1 cut(s) 481
Bsu15I ATCGAT 1 cut(s) 228
BsuRI GGCC 1 cut(s) 806
BsuTUI ATCGAT 1 cut(s) 228
BtgI CCRYGG 1 cut(s) 590
BtgZI GCGATG 1 cut(s) 1216
BtrI CACGTC 1 cut(s) 145
BtsCI GGATG 1 cut(s) 10
BtsI GCAGTG 1 cut(s) 1090
BtsIMutI CAGTG 4 cut(s) 558, 819, 1090, 1280
Cac8I GCNNGC 3 cut(s) 75, 96, 614
CaiI CAGNNNCTG 1 cut(s) 1243
ClaI ATCGAT 1 cut(s) 228
Csp6I GTAC 2 cut(s) 396, 920
CspCI CAANNNNNGTGG 2 cut(s) 505, 540
CviAII CATG 4 cut(s) 202, 609, 911, 1042
CviQI GTAC 2 cut(s) 396, 920
DdeI CTNAG 3 cut(s) 313, 1193, 1310
DpnI GATC 4 cut(s) 35, 483, 954, 1272
DpnII GATC 4 cut(s) 33, 481, 952, 1270
DraI TTTAAA 1 cut(s) 567
Eam1104I CTCTTC 3 cut(s) 229, 1239, 1373
EarI CTCTTC 3 cut(s) 229, 1239, 1373
Eco130I CCWWGG 2 cut(s) 1070, 1157
Eco147I AGGCCT 1 cut(s) 806
Eco57I CTGAAG 2 cut(s) 1101, 1220
Eco91I GGTNACC 2 cut(s) 986, 1124
EcoNI CCTNNNNNAGG 1 cut(s) 1365
EcoO65I GGTNACC 2 cut(s) 986, 1124
EcoRI GAATTC 1 cut(s) 171
EcoRII CCWGG 1 cut(s) 440
EcoT14I CCWWGG 2 cut(s) 1070, 1157
EcoT22I ATGCAT 1 cut(s) 912
ErhI CCWWGG 2 cut(s) 1070, 1157
FaeI CATG 4 cut(s) 205, 612, 914, 1045
FalI AAGNNNNNCTT 2 cut(s) 644, 676
FatI CATG 4 cut(s) 201, 608, 910, 1041
FauI CCCGC 1 cut(s) 46
FblI GTMKAC 1 cut(s) 871
Fnu4HI GCNGC 1 cut(s) 342
FokI GGATG 1 cut(s) 17
Fsp4HI GCNGC 1 cut(s) 342
FspBI CTAG 9 cut(s) 140, 287, 333, 366, 494, 668, 1130, 1158, 1253
GluI GCNGC 1 cut(s) 342
HaeIII GGCC 1 cut(s) 806
HapII CCGG 1 cut(s) 256
Hin1II CATG 4 cut(s) 205, 612, 914, 1045
HinfI GANTC 4 cut(s) 16, 437, 1139, 1340
HpaII CCGG 1 cut(s) 256
HphI GGTGA 1 cut(s) 1136
Hpy166II GTNNAC 3 cut(s) 302, 594, 872
Hpy188I TCNGA 7 cut(s) 326, 388, 628, 950, 1012, 1104, 1339
Hpy188III TCNNGA 9 cut(s) 31, 212, 287, 366, 668, 796, 843, 1079, 1243
Hpy8I GTNNAC 3 cut(s) 302, 594, 872
HpyAV CCTTC 4 cut(s) 161, 454, 614, 817
HpyCH4III ACNGT 5 cut(s) 553, 687, 749, 814, 992
HpyCH4IV ACGT 2 cut(s) 144, 581
HpyCH4V TGCA 8 cut(s) 77, 616, 910, 944, 1035, 1090, 1120, 1278
HpyF10VI GCNNNNNNNGC 3 cut(s) 653, 830, 1198
HpyF3I CTNAG 3 cut(s) 313, 1193, 1310
HpySE526I ACGT 2 cut(s) 144, 581
Hsp92II CATG 4 cut(s) 205, 612, 914, 1045
Kzo9I GATC 4 cut(s) 33, 481, 952, 1270
LguI GCTCTTC 1 cut(s) 229
LmnI GCTCC 1 cut(s) 1306
Lsp1109I GCAGC 1 cut(s) 328
LweI GCATC 1 cut(s) 589
MaeI CTAG 9 cut(s) 140, 287, 333, 366, 494, 668, 1130, 1158, 1253
MaeII ACGT 2 cut(s) 144, 581
MaeIII GTNAC 6 cut(s) 547, 582, 677, 986, 1124, 1313
MalI GATC 4 cut(s) 35, 483, 954, 1272
MboI GATC 4 cut(s) 33, 481, 952, 1270
MboII GAAGA 9 cut(s) 25, 116, 246, 388, 469, 647, 650, 989, 1226
MfeI CAATTG 1 cut(s) 1355
MflI RGATCY 1 cut(s) 481
MhlI GDGCHC 1 cut(s) 256
MlyI GAGTC 2 cut(s) 446, 1133
MmeI TCCRAC 2 cut(s) 304, 1241
MnlI CCTC 4 cut(s) 597, 765, 811, 977
Mph1103I ATGCAT 1 cut(s) 912
MroXI GAANNNNTTC 1 cut(s) 171
MseI TTAA 4 cut(s) 248, 477, 566, 1298
MslI CAYNNNNRTG 1 cut(s) 1040
MspI CCGG 1 cut(s) 256
MspR9I CCNGG 2 cut(s) 256, 442
MunI CAATTG 1 cut(s) 1355
Mva1269I GAATGC 2 cut(s) 912, 944
MvaI CCWGG 1 cut(s) 442
MwoI GCNNNNNNNGC 3 cut(s) 653, 830, 1198
NciI CCSGG 1 cut(s) 256
NdeII GATC 4 cut(s) 33, 481, 952, 1270
NlaIII CATG 4 cut(s) 205, 612, 914, 1045
NlaIV GGNNCC 1 cut(s) 483
NmuCI GTSAC 2 cut(s) 547, 1124
NsiI ATGCAT 1 cut(s) 912
NspI RCATGY 1 cut(s) 612
NspV TTCGAA 1 cut(s) 904
PceI AGGCCT 1 cut(s) 806
PciSI GCTCTTC 1 cut(s) 229
PcsI WCGNNNNNNNCGW 1 cut(s) 587
PctI GAATGC 2 cut(s) 912, 944
PdmI GAANNNNTTC 1 cut(s) 171
PfeI GAWTC 2 cut(s) 16, 1340
PkrI GCNGC 1 cut(s) 343
PleI GAGTC 2 cut(s) 445, 1133
PpsI GAGTC 2 cut(s) 445, 1133
Psp6I CCWGG 1 cut(s) 440
PspEI GGTNACC 2 cut(s) 986, 1124
PspGI CCWGG 1 cut(s) 440
PspN4I GGNNCC 1 cut(s) 483
PstNI CAGNNNCTG 1 cut(s) 1243
PsuI RGATCY 1 cut(s) 481
RsaI GTAC 2 cut(s) 397, 921
RsaNI GTAC 2 cut(s) 396, 920
RseI CAYNNNNRTG 1 cut(s) 1040
SapI GCTCTTC 1 cut(s) 229
SaqAI TTAA 4 cut(s) 248, 477, 566, 1298
SatI GCNGC 1 cut(s) 342
Sau3AI GATC 4 cut(s) 33, 481, 952, 1270
SchI GAGTC 2 cut(s) 446, 1133
ScrFI CCNGG 2 cut(s) 256, 442
SduI GDGCHC 1 cut(s) 256
SfaNI GCATC 1 cut(s) 589
SfcI CTRYAG 2 cut(s) 99, 1362
SfuI TTCGAA 1 cut(s) 904
SmiMI CAYNNNNRTG 1 cut(s) 1040
SseBI AGGCCT 1 cut(s) 806
SsiI CCGC 2 cut(s) 45, 53
SspI AATATT 1 cut(s) 714
SspMI CTAG 9 cut(s) 140, 287, 333, 366, 494, 668, 1130, 1158, 1253
StuI AGGCCT 1 cut(s) 806
StyD4I CCNGG 2 cut(s) 254, 440
StyI CCWWGG 2 cut(s) 1070, 1157
TaaI ACNGT 5 cut(s) 553, 687, 749, 814, 992
TaiI ACGT 2 cut(s) 147, 584
TaqI TCGA 4 cut(s) 228, 468, 904, 955
TatI WGTACW 1 cut(s) 919
TfiI GAWTC 2 cut(s) 16, 1340
Tru1I TTAA 4 cut(s) 248, 477, 566, 1298
Tru9I TTAA 4 cut(s) 248, 477, 566, 1298
TscAI CASTG 4 cut(s) 558, 819, 1097, 1280
TseFI GTSAC 2 cut(s) 547, 1124
TseI GCWGC 1 cut(s) 341
Tsp45I GTSAC 2 cut(s) 547, 1124
TspDTI ATGAA 3 cut(s) 77, 1103, 1190
TspGWI ACGGA 1 cut(s) 579
TspRI CASTG 4 cut(s) 558, 819, 1097, 1280
XagI CCTNNNNNAGG 1 cut(s) 1365
XapI RAATTY 2 cut(s) 171, 1323
XbaI TCTAGA 3 cut(s) 286, 365, 667
XceI RCATGY 1 cut(s) 612
XmaJI CCTAGG 1 cut(s) 1157
XmiI GTMKAC 1 cut(s) 871
XmnI GAANNNNTTC 1 cut(s) 171
XspI CTAG 9 cut(s) 140, 287, 333, 366, 494, 668, 1130, 1158, 1253
Zsp2I ATGCAT 1 cut(s) 912
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.