Rw7G017900

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0000042
Physical Location & Seq
Forward (+)
19042821 .. 19051603
8783 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G017900.1

Sequence Viewer

Length: 4125 bp
ATGGAGATTCTTGTTGCAATAGCTGGAAAACTTGCCGAGTACACGGTTGAACCTATTGGACGCCAAGTGGGTTATCTAGCTCACTACAAAAGCAACCATCAAAAGCTGCAGACCAAATTGGAGGACTTAAGTGCTGCCAGAGATGAGGTTCAACATAAGGTTGATCAAGTTAGGAGAGGAGGTAAAAGAATCGAGACTACTGTTCTGAACTGGAAGACAAGAGTGGATGCAATCATCAAAGAGGCAGAGGAATTCCTGAAAGACGGCCGCCACGCGCAAACCGAGTGTCTTCATGGTTTTTGTCCTCATTTGGTGCTCCGTTATCGACTAAGCAGGAAATCAACAAAATTGGCGGAGGAGATTGATGAACTTGATCAAAAAAAGGAGTTCCCCAACTTTGCATATGATGTTCCTCCACAAGAGTTATGTCTCTTATCTACCGGGCATTACAGTACATTTGATTCAAGGAATTCAATTGTGATGAGAGTCATGGATGAACTGAGAAATCCTAATACAGAAATGATTCTGGTGTGTGGAATCGGTGGAGTAGGGAAAACCACACTCGTTGAAGAAGTTCTTAGGCAAGCTAAGGATGTTAACTTATTTGATGATTTGGTGATGGTGAGAGACGTGAAAGAGAACCCAGACCTTCTAAAAATCCAAAAAGAAATTGCCATGAAGTTGGGTATGAGCATTGACGAAAATCATACTCTAGCTCAAAGAGCGCCCCTTCTAGGTGATAGGATAAAACAGAAGAGGACTCTTGTAGTTTTAGACGATGTTTGGGAAGAAATTGATCTACTGGCTGTCGGAGTTCCCCGCCTGGCTACTTGTAAAGTAGTGCTGACATGTAGAAGTCGAAAGGAATTGTCCTTGGATAGGCGTACACAAACAGATATTTCACTGGATGTTTTAAATGAAGAGGAAGCCTGGAGTCTATTTGAGAAGATGGCTGGTGATGTTGTCAAAGATAGCCGCATACGAAGCATAGCAATTGAAGTAGCCAAAAAATGTGGAGGTTTGCCGGTCTTGATTGTTACGGTTGCAAGAGCTCTAAAAGACAGAAACAAGTTGCATCATTGGAATGACACCTTGAGACGTCTTAGAGGCTTTGACAACAAAGAATTGACGGAAAAAACATACTCGGCTCTGGAGTGGAGTTACGATCAGTTGGAAGATAAAGAGCTTAAGCCTTTGTTCTTGCTTTGTGGGATTATTGTAGTTAAGAACCATATTTATTTGGCAGACTTGTTGAAATATGGTTTTGGTTTGGATTTGATTAAAAATGTCAATAAAATAGAAGATGCACGAGAGGCATTGTATACACTCGTTGACAAGCTCAAAGACTCTTGCTTGTTGCTGGACAGTGATATCTATATGCATGTTAGAATGCATGATCTCGTATGTGAGGTTGCTACCCAGATTGCATACAGAGAACACCACGTCTTATCTGTTGGATATGGTGGTGAATTGAAAGAATGGCCAGAGAAAGATTTCTTTGAAAGGTGCAGTAAGATGTCTTTAAAATCCAGCAATATTCCCATGCTTTCTGAAGTACCATGGAAATGCCCGAAACTAGAGATGTTTCATTTGTATAGAGAAGCAGGCCTGGGTGATGCATGGGTGGGAATCCCAGCCAACTTTTTTAGTGAAATGGAGAAACTGAAAGTGTTGGGTTTAACAAAAGTGCATGTGGTGTCACTATTCTCATCTCTTCAGTTCTTGAAGAATCTTCAGACGTTGTGTTTAGAAGAATGCCTGCTGGAGGAAGAGAATCAAGAGATAGCTCTGGTTGGACATCTATGTAACTTGGAGATTCTTAGCTTTGCGCGGTCCAACATCAAACAGCTACCTGAAGAAATAGGGCAATTGATTCGATTGAGATGGTTGGATTTGAGTGAATGTGATGAACTTGAAGTGATTTCACCTGGTGTTATTTCAAGGTTGGAAAGACTAGAAGAATTATCACTGAGAAACGTCTATCTCAAATGGGAGGCTGAAAGGGGAGGAAGTAATGCTAGTCTTTTAGAGCTGAAAGACTTGTCTCAACTAACTGCATTGGAGATATATATTGAAGATGCAAATATTCTTCCATCATACTTGTTCTCCAGTAGGTTGGTAAGATACCAAATATATATTGGCGATGTTTGGAATAGTTGGGAGGAGACTATGGCTGAAACGACCCTCAACACGCTAAAACTGAAGCTCGCTCCCAGCGATGAATTGGACCACGGTATAAAAACATTGTTGAAGAAATCTGAAGATTTGTCTTTGGATGGAACAGAGAGTGTTAAAAGTATTGCCCGTCAATTACATGTTGAAGATTTTCAGCGACTGATACACCTCCGTCTCCAAAATAATGTTGATTTCACCTCTATCATTAATAGGAAGGTTGTGTTCCCCAACTTAACAACCTTGAGCATATGTAGCTGTGACCATCTAAGTTTCTTGTTCTCATTTTCTATGGCTAAAAGTTTGGTGGAGCTCAAACATCTTGAAGTATCTAGTTGTGAAATAATGGAAGAGATAGTATCAGCAAGAGATCAATCCAACGGAGAAAATATCGATATCATGTTTTGTAAGTTGGAAAGTCTAATACTGGATAAACTCCCAAACATCACTAGATTCTGTACTGAATTTTCTCCCGTGACGAAATTTGATACGGAACTGGGGGCATCCATCTTTGATCATACGAATAGTAAAAAACTTGATGTCGAGAATGGGACTGCTGTACGAGCATGTCTTTTTGATGCACAGGTAAAATTTCTGAGCTTGGAGAGACTGAAAATCGATGGGCTACGGAAGTTGCACACGCTATGGAACAATAAATTTGCTGATCAAGACTCTTTTTGCCAACTCAAAGAAGTTCAAGTTTCAAATTGCAACGGTCTGAAAAAGATCTTTCCAGTCTCAGTAGCCAGACGTCTCCAAAAGCTACATTCGCTGGATGTGACAGGGTGTGATGAAGTGGAGGAAATCATTATTGGTGAACAAGGACTAGAAACAGAGTCTCCTCATTTAGTGTTCCCAAAAGTAACACGTGTGGAATTTTTCAATATGCCCAAACTGAGTAGATTCTATCCTGGGATTATTGCTTCCAAGTGGCCGTTACTCAAACAACTAAACATTTATGGATGTGAGAAAGTGAAGATGTTTGCCGCAGAACTTCCAATTTCTTCAGAAAGACATGAGCCGAACCCTCTAATTGGACAATCTCTCTTTCTAATTGACAAGGATTCATTCCCCAATTTAGAATTCTTGGAGCTACAAGTTGCGGGTGAGATTTGGTACGGTCCATCATCATCCCCAGCAGCACAGTTCTTTCCCAAATTAAAAACTATTTGCTTACACAACTGGGCACGGTTCTCCAAGCAAGCCGCAATACATTTCCTTGAGAAATTACCCAATCTTGAGGAGATAGTAGTGGGCTGGGATGATGTTTCCACGGAAATATTTGTGAATGAAGAAATTAATGGCGGTGAGGAGATACATGCAGTAAAAACTTTGAGGGTCCATTTGATGCACAAGCTCTTGCAATTAGGGAATGGGAACTCTCAAACAGCGGGCCCACTTTTCCCAAACTTGGTCACTCTTGAGGTGGTTGGTTGTGACATGTTAAAGAGTGTAGAGTCATCCGCAGCAATATCCTTCCGCAATCTAACAACTCTGAGTGTAGTGGGTTGTGATGGATTGGAATACTTGACAAGTTATTCCGTAGCTAAGAGCTTAATGCAACTGACAACACTAGAAGTGACTCATTGTGGAATCCTGAGAGCAATTATAGGGGCAAGCAACGAAGATGATCATGATACAGGAGCAACTTGTGAGATTGCTTTCACCCGGTTGCAACATTTGTCACTTAAATGGCTACCAAGACTGCAAGGCTTTTGCTCGGGAAATTGCATTGTCAAACTCCCATCCTCAACAGAGTTATCTGTGTTTGGCTGCGGGATTGAGTTGAAGATTTCTTCTGAAGGGGTCCTGCTCAGTAATCCAAAACCAGAAAGAGTAGAAATAGCAAAACCAGAAATAGCGGAGGAGGTAGATGAAAATGTTGACGGAGAAAAAGAAAAAGATGAGGATGTTGGCACGAGTCGCCAAGACATTGAAGATAGACAAGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

1374

Amino Acids

155.88

Weight (kDa)

5.4

Isoelectric Point (pI)

45.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 159 - 319 2.2e-25 NB-ARC domain
LRR_14 PF23598 547 - 833 2.2e-09 Leucine-rich repeat region
LRR_14 PF23598 598 - 865 2.9e-09 Leucine-rich repeat region
LRR_RPS2 PF23247 781 - 877 6.5e-11 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 920 - 988 3.6e-16 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1092 - 1209 2.4e-07 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1215 - 1316 1e-09 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 1102, 2926
AccI GTMKAC 1 cut(s) 1322
AccII CGCG 2 cut(s) 275, 1831
AcoI YGGCCR 3 cut(s) 265, 1481, 3104
AcsI RAATTY 8 cut(s) 251, 469, 2636, 2654, 2762, 2828, 3047, 3254
AcuI CTGAAG 8 cut(s) 1572, 1700, 1718, 1875, 2222, 2280, 3162, 3993
AcvI CACGTG 1 cut(s) 3041
AcyI GRCGYC 3 cut(s) 61, 1099, 2923
AdeI CACNNNGTG 1 cut(s) 1931
AfaI GTAC 7 cut(s) 41, 454, 886, 1557, 2632, 2733, 3290
AfiI CCNNNNNNNGG 5 cut(s) 734, 879, 1765, 3206, 3583
AflII CTTAAG 2 cut(s) 127, 1187
AflIII ACRYGT 5 cut(s) 848, 2314, 3038, 3040, 3612
AjiI CACGTC 2 cut(s) 631, 1444
AjnI CCWGG 5 cut(s) 822, 929, 1608, 1927, 3082
AjuI GAANNNNNNNTTGG 4 cut(s) 2967, 2999, 3239, 3271
Alw21I GWGCWC 3 cut(s) 318, 1054, 2487
AlwNI CAGNNNCTG 1 cut(s) 2335
Ama87I CYCGRG 1 cut(s) 3892
AoxI GGCC 5 cut(s) 265, 1481, 1606, 3104, 3565
ApaI GGGCCC 1 cut(s) 3569
ApeKI GCWGC 5 cut(s) 106, 134, 3311, 3638, 3945
ApoI RAATTY 8 cut(s) 251, 469, 2636, 2654, 2762, 2828, 3047, 3254
ArsI GACNNNNNNTTYG 2 cut(s) 271, 303
AseI ATTAAT 2 cut(s) 2382, 3471
Asp700I GAANNNNTTC 4 cut(s) 522, 573, 1493, 2325
AspLEI GCGC 3 cut(s) 277, 727, 1831
AspS9I GGNCC 7 cut(s) 1833, 2227, 3293, 3511, 3565, 3566, 3979
AsuC2I CCSGG 2 cut(s) 442, 3841
AvaI CYCGRG 1 cut(s) 3892
AvaII GGWCC 5 cut(s) 1833, 2227, 3293, 3511, 3979
BaeGI GKGCMC 2 cut(s) 3361, 3569
BalI TGGCCA 1 cut(s) 1483
BanII GRGCYC 3 cut(s) 1054, 2487, 3569
BauI CACGAG 2 cut(s) 1308, 4090
BbrPI CACGTG 1 cut(s) 3041
BbsI GAAGAC 2 cut(s) 221, 281
Bbv12I GWGCWC 3 cut(s) 318, 1054, 2487
BbvI GCAGC 5 cut(s) 93, 121, 3323, 3650, 3932
BceAI ACGGC 2 cut(s) 280, 3091
BcgI CGANNNNNNTGC 2 cut(s) 1856, 1890
BciT130I CCWGG 5 cut(s) 824, 931, 1610, 1929, 3084
BclI TGATCA 5 cut(s) 163, 373, 2686, 2836, 3802
BcnI CCSGG 2 cut(s) 442, 3841
BfmI CTRYAG 1 cut(s) 107
BfoI RGCGCY 1 cut(s) 728
BfrI CTTAAG 2 cut(s) 127, 1187
BglII AGATCT 1 cut(s) 2898
BisI GCNGC 9 cut(s) 107, 135, 268, 976, 3159, 3312, 3378, 3639, 3946
BlsI GCNGC 9 cut(s) 108, 136, 269, 977, 3160, 3313, 3379, 3640, 3947
Bme1390I CCNGG 7 cut(s) 442, 824, 931, 1610, 1929, 3084, 3841
Bme18I GGWCC 5 cut(s) 1833, 2227, 3293, 3511, 3979
BmeT110I CYCGRG 1 cut(s) 3892
BmgBI CACGTC 2 cut(s) 631, 1444
BmgT120I GGNCC 7 cut(s) 1833, 2227, 3293, 3511, 3565, 3566, 3979
BmiI GGNNCC 3 cut(s) 3512, 3567, 3980
BmrFI CCNGG 7 cut(s) 442, 824, 931, 1610, 1929, 3084, 3841
BmrI ACTGGG 2 cut(s) 2678, 3364
BmsI GCATC 8 cut(s) 217, 1084, 1294, 1606, 2068, 2684, 2740, 3510
BmuI ACTGGG 2 cut(s) 2678, 3364
BpiI GAAGAC 2 cut(s) 221, 281
BpmI CTGGAG 4 cut(s) 952, 1172, 1784, 2092
Bpu10I CCTNAGC 1 cut(s) 588
BpuEI CTTGAG 5 cut(s) 1114, 2437, 3413, 3431, 3614
BpuMI CCSGG 2 cut(s) 442, 3841
Bsa29I ATCGAT 2 cut(s) 2565, 2790
BsaAI YACGTR 1 cut(s) 3041
BsaHI GRCGYC 3 cut(s) 61, 1099, 2923
BsaJI CCNNGG 6 cut(s) 873, 1559, 1609, 2230, 3083, 3444
BsaXI ACNNNNNCTCC 6 cut(s) 166, 196, 2090, 2120, 2995, 3025
Bsc4I CCNNNNNNNGG 5 cut(s) 734, 879, 1765, 3206, 3583
Bse118I RCCGGY 1 cut(s) 1024
Bse1I ACTGG 8 cut(s) 215, 807, 909, 2109, 2604, 2673, 2906, 3359
BseBI CCWGG 5 cut(s) 824, 931, 1610, 1929, 3084
BseCI ATCGAT 2 cut(s) 2565, 2790
BseDI CCNNGG 6 cut(s) 873, 1559, 1609, 2230, 3083, 3444
BseLI CCNNNNNNNGG 5 cut(s) 734, 879, 1765, 3206, 3583
BseMII CTCAG 8 cut(s) 491, 1961, 2759, 2925, 3059, 3659, 3761, 4000
BseNI ACTGG 8 cut(s) 215, 807, 909, 2109, 2604, 2673, 2906, 3359
BseRI GAGGAG 7 cut(s) 192, 371, 2177, 3003, 3428, 3497, 4052
BseSI GKGCMC 2 cut(s) 3361, 3569
BseX3I CGGCCG 1 cut(s) 265
BseXI GCAGC 5 cut(s) 93, 121, 3323, 3650, 3932
BseYI CCCAGC 4 cut(s) 1633, 2213, 3307, 3429
BsgI GTGCAG 1 cut(s) 1528
Bsh1236I CGCG 2 cut(s) 275, 1831
Bsh1285I CGRYCG 1 cut(s) 268
BshFI GGCC 5 cut(s) 267, 1483, 1608, 3106, 3567
BshVI ATCGAT 2 cut(s) 2565, 2790
BsiEI CGRYCG 1 cut(s) 268
BsiHKAI GWGCWC 3 cut(s) 318, 1054, 2487
BsiHKCI CYCGRG 1 cut(s) 3892
BsiSI CCGG 3 cut(s) 441, 1025, 3841
BslFI GGGAC 1 cut(s) 2737
BslI CCNNNNNNNGG 5 cut(s) 734, 879, 1765, 3206, 3583
BsmBI CGTCTC 4 cut(s) 621, 1090, 2354, 2930
BsmFI GGGAC 1 cut(s) 2737
BsmI GAATGC 2 cut(s) 1395, 1760
BsnI GGCC 5 cut(s) 267, 1483, 1608, 3106, 3567
BsoBI CYCGRG 1 cut(s) 3892
Bsp120I GGGCCC 1 cut(s) 3565
Bsp1286I GDGCHC 5 cut(s) 318, 1054, 2487, 3361, 3569
Bsp19I CCATGG 1 cut(s) 1559
BspANI GGCC 5 cut(s) 267, 1483, 1608, 3106, 3567
BspCNI CTCAG 8 cut(s) 492, 1962, 2760, 2924, 3060, 3660, 3762, 3999
BspDI ATCGAT 2 cut(s) 2565, 2790
BspFNI CGCG 2 cut(s) 275, 1831
BspHI TCATGA 1 cut(s) 3805
BspLI GGNNCC 3 cut(s) 3512, 3567, 3980
BspMAI CTGCAG 1 cut(s) 111
BspTI CTTAAG 2 cut(s) 127, 1187
BsrFI RCCGGY 1 cut(s) 1024
BsrI ACTGG 8 cut(s) 215, 807, 909, 2109, 2604, 2673, 2906, 3359
BssAI RCCGGY 1 cut(s) 1024
BssECI CCNNGG 6 cut(s) 873, 1559, 1609, 2230, 3083, 3444
BssNAI GTATAC 1 cut(s) 1323
BssNI GRCGYC 3 cut(s) 61, 1099, 2923
BssSI CACGAG 2 cut(s) 1308, 4090
BssT1I CCWWGG 2 cut(s) 873, 1559
Bst1107I GTATAC 1 cut(s) 1323
Bst2BI CACGAG 2 cut(s) 1308, 4090
Bst2UI CCWGG 5 cut(s) 824, 931, 1610, 1929, 3084
Bst6I CTCTTC 5 cut(s) 749, 915, 1719, 1764, 2517
BstACI GRCGYC 3 cut(s) 61, 1099, 2923
BstAFI CTTAAG 2 cut(s) 127, 1187
BstBAI YACGTR 1 cut(s) 3041
BstC8I GCNNGC 7 cut(s) 585, 1606, 1760, 2208, 3375, 3565, 3790
BstDSI CCRYGG 3 cut(s) 1559, 2230, 3444
BstENI CCTNNNNNAGG 2 cut(s) 877, 1763
BstFNI CGCG 2 cut(s) 275, 1831
BstH2I RGCGCY 1 cut(s) 728
BstHHI GCGC 3 cut(s) 277, 727, 1831
BstMCI CGRYCG 1 cut(s) 268
BstMWI GCNNNNNNNGC 7 cut(s) 722, 984, 1313, 2427, 2735, 2941, 4095
BstNI CCWGG 5 cut(s) 824, 931, 1610, 1929, 3084
BstNSI RCATGY 7 cut(s) 852, 1385, 1694, 2318, 2742, 3494, 3616
BstSCI CCNGG 7 cut(s) 440, 822, 929, 1608, 1927, 3082, 3839
BstSFI CTRYAG 1 cut(s) 107
BstSLI GKGCMC 2 cut(s) 3361, 3569
BstUI CGCG 2 cut(s) 275, 1831
BstV1I GCAGC 5 cut(s) 93, 121, 3323, 3650, 3932
BstV2I GAAGAC 2 cut(s) 221, 281
BstX2I RGATCY 1 cut(s) 2898
BstXI CCANNNNNNTGG 2 cut(s) 682, 2116
BstYI RGATCY 1 cut(s) 2898
BstZ17I GTATAC 1 cut(s) 1323
BstZI CGGCCG 1 cut(s) 265
Bsu15I ATCGAT 2 cut(s) 2565, 2790
BsuRI GGCC 5 cut(s) 267, 1483, 1608, 3106, 3567
BsuTUI ATCGAT 2 cut(s) 2565, 2790
BtgI CCRYGG 3 cut(s) 1559, 2230, 3444
BtgZI GCGATG 2 cut(s) 2157, 2232
BtrI CACGTC 2 cut(s) 631, 1444
BtsIMutI CAGTG 3 cut(s) 902, 1372, 1967
Cac8I GCNNGC 7 cut(s) 585, 1606, 1760, 2208, 3375, 3565, 3790
CaiI CAGNNNCTG 1 cut(s) 2335
CciI TCATGA 1 cut(s) 3805
CfoI GCGC 3 cut(s) 277, 727, 1831
Cfr10I RCCGGY 1 cut(s) 1024
Cfr13I GGNCC 7 cut(s) 1833, 2227, 3293, 3511, 3565, 3566, 3979
ClaI ATCGAT 2 cut(s) 2565, 2790
CseI GACGC 1 cut(s) 69
CsiI ACCWGGT 1 cut(s) 1927
Csp6I GTAC 7 cut(s) 40, 453, 885, 1556, 2631, 2732, 3289
CspCI CAANNNNNGTGG 4 cut(s) 547, 582, 994, 1029
CviQI GTAC 7 cut(s) 40, 453, 885, 1556, 2631, 2732, 3289
DraI TTTAAA 2 cut(s) 915, 1524
DraIII CACNNNGTG 1 cut(s) 1931
EaeI YGGCCR 3 cut(s) 265, 1481, 3104
EagI CGGCCG 1 cut(s) 265
Eam1104I CTCTTC 5 cut(s) 749, 915, 1719, 1764, 2517
EarI CTCTTC 5 cut(s) 749, 915, 1719, 1764, 2517
EciI GGCGGA 1 cut(s) 368
Ecl136II GAGCTC 2 cut(s) 1052, 2485
EclXI CGGCCG 1 cut(s) 265
Eco130I CCWWGG 2 cut(s) 873, 1559
Eco147I AGGCCT 1 cut(s) 1608
Eco24I GRGCYC 3 cut(s) 1054, 2487, 3569
Eco32I GATATC 2 cut(s) 1372, 2569
Eco47I GGWCC 5 cut(s) 1833, 2227, 3293, 3511, 3979
Eco52I CGGCCG 1 cut(s) 265
Eco53kI GAGCTC 2 cut(s) 1052, 2485
Eco57I CTGAAG 8 cut(s) 1572, 1700, 1718, 1875, 2222, 2280, 3162, 3993
Eco72I CACGTG 1 cut(s) 3041
Eco88I CYCGRG 1 cut(s) 3892
EcoICRI GAGCTC 2 cut(s) 1052, 2485
EcoNI CCTNNNNNAGG 2 cut(s) 877, 1763
EcoO109I RGGNCCY 1 cut(s) 3979
EcoRI GAATTC 3 cut(s) 251, 469, 3254
EcoRII CCWGG 5 cut(s) 822, 929, 1608, 1927, 3082
EcoRV GATATC 2 cut(s) 1372, 2569
EcoT14I CCWWGG 2 cut(s) 873, 1559
EcoT22I ATGCAT 3 cut(s) 1383, 1395, 1621
EcoT38I GRGCYC 3 cut(s) 1054, 2487, 3569
ErhI CCWWGG 2 cut(s) 873, 1559
Esp3I CGTCTC 4 cut(s) 621, 1090, 2354, 2930
FalI AAGNNNNNCTT 2 cut(s) 561, 593
FaqI GGGAC 1 cut(s) 2737
FauI CCCGC 4 cut(s) 827, 3268, 3556, 3941
FauNDI CATATG 2 cut(s) 403, 2423
FbaI TGATCA 5 cut(s) 163, 373, 2686, 2836, 3802
FblI GTMKAC 1 cut(s) 1322
Fnu4HI GCNGC 9 cut(s) 107, 135, 268, 976, 3159, 3312, 3378, 3639, 3946
FriOI GRGCYC 3 cut(s) 1054, 2487, 3569
Fsp4HI GCNGC 9 cut(s) 107, 135, 268, 976, 3159, 3312, 3378, 3639, 3946
GlaI GCGC 3 cut(s) 276, 726, 1830
GluI GCNGC 9 cut(s) 107, 135, 268, 976, 3159, 3312, 3378, 3639, 3946
GsaI CCCAGC 4 cut(s) 1637, 2217, 3311, 3433
GsuI CTGGAG 4 cut(s) 952, 1172, 1784, 2092
HaeII RGCGCY 1 cut(s) 728
HaeIII GGCC 5 cut(s) 267, 1483, 1608, 3106, 3567
HapII CCGG 3 cut(s) 441, 1025, 3841
HgaI GACGC 1 cut(s) 69
HhaI GCGC 3 cut(s) 277, 727, 1831
Hin1I GRCGYC 3 cut(s) 61, 1099, 2923
Hin6I GCGC 3 cut(s) 275, 725, 1829
HinP1I GCGC 3 cut(s) 275, 725, 1829
HincII GTYRAC 3 cut(s) 598, 1333, 4057
HindII GTYRAC 3 cut(s) 598, 1333, 4057
HpaI GTTAAC 1 cut(s) 598
HpaII CCGG 3 cut(s) 441, 1025, 3841
Hpy166II GTNNAC 7 cut(s) 42, 598, 887, 1323, 1333, 2990, 4057
Hpy8I GTNNAC 7 cut(s) 42, 598, 887, 1323, 1333, 2990, 4057
HpyAV CCTTC 5 cut(s) 659, 740, 2383, 3658, 3968
HpyCH4IV ACGT 7 cut(s) 630, 1099, 1443, 1739, 1977, 2923, 3040
HpyF10VI GCNNNNNNNGC 7 cut(s) 722, 984, 1313, 2427, 2735, 2941, 4095
HpySE526I ACGT 7 cut(s) 630, 1099, 1443, 1739, 1977, 2923, 3040
Hsp92I GRCGYC 3 cut(s) 61, 1099, 2923
HspAI GCGC 3 cut(s) 275, 725, 1829
Ksp22I TGATCA 5 cut(s) 163, 373, 2686, 2836, 3802
KspAI GTTAAC 1 cut(s) 598
LmnI GCTCC 5 cut(s) 321, 2215, 2482, 3262, 3815
Lsp1109I GCAGC 5 cut(s) 93, 121, 3323, 3650, 3932
LweI GCATC 8 cut(s) 217, 1084, 1294, 1606, 2068, 2684, 2740, 3510
MabI ACCWGGT 1 cut(s) 1927
MaeII ACGT 7 cut(s) 630, 1099, 1443, 1739, 1977, 2923, 3040
MfeI CAATTG 3 cut(s) 474, 993, 1868
MflI RGATCY 1 cut(s) 2898
MhlI GDGCHC 5 cut(s) 318, 1054, 2487, 3361, 3569
MlsI TGGCCA 1 cut(s) 1483
MluNI TGGCCA 1 cut(s) 1483
MlyI GAGTC 9 cut(s) 495, 754, 943, 1340, 2837, 3017, 3638, 3748, 4102
MmeI TCCRAC 9 cut(s) 790, 1152, 1435, 1774, 1860, 1869, 1926, 2565, 2574
Mox20I TGGCCA 1 cut(s) 1483
Mph1103I ATGCAT 3 cut(s) 1383, 1395, 1621
MroXI GAANNNNTTC 4 cut(s) 522, 573, 1493, 2325
MscI TGGCCA 1 cut(s) 1483
MslI CAYNNNNRTG 3 cut(s) 1083, 1564, 3862
Msp20I TGGCCA 1 cut(s) 1483
MspA1I CMGCKG 1 cut(s) 3563
MspCI CTTAAG 2 cut(s) 127, 1187
MspI CCGG 3 cut(s) 441, 1025, 3841
MspR9I CCNGG 7 cut(s) 442, 824, 931, 1610, 1929, 3084, 3841
MunI CAATTG 3 cut(s) 474, 993, 1868
Mva1269I GAATGC 2 cut(s) 1395, 1760
MvaI CCWGG 5 cut(s) 824, 931, 1610, 1929, 3084
MvnI CGCG 2 cut(s) 275, 1831
MwoI GCNNNNNNNGC 7 cut(s) 722, 984, 1313, 2427, 2735, 2941, 4095
NciI CCSGG 2 cut(s) 442, 3841
NcoI CCATGG 1 cut(s) 1559
NdeI CATATG 2 cut(s) 403, 2423
NlaIV GGNNCC 3 cut(s) 3512, 3567, 3980
NmeAIII GCCGAG 2 cut(s) 61, 1124
NmuCI GTSAC 8 cut(s) 1698, 2432, 2647, 2950, 3586, 3608, 3751, 3855
NsiI ATGCAT 3 cut(s) 1383, 1395, 1621
NspI RCATGY 7 cut(s) 852, 1385, 1694, 2318, 2742, 3494, 3616
PagI TCATGA 1 cut(s) 3805
PceI AGGCCT 1 cut(s) 1608
PciI ACATGT 3 cut(s) 848, 2314, 3612
PcsI WCGNNNNNNNCGW 2 cut(s) 279, 2214
PctI GAATGC 2 cut(s) 1395, 1760
PdmI GAANNNNTTC 4 cut(s) 522, 573, 1493, 2325
PkrI GCNGC 9 cut(s) 108, 136, 269, 977, 3160, 3313, 3379, 3640, 3947
PleI GAGTC 9 cut(s) 494, 754, 942, 1340, 2837, 3016, 3637, 3748, 4101
PmaCI CACGTG 1 cut(s) 3041
PmlI CACGTG 1 cut(s) 3041
PpsI GAGTC 9 cut(s) 494, 754, 942, 1340, 2837, 3016, 3637, 3748, 4101
Ppu21I YACGTR 1 cut(s) 3041
PpuMI RGGWCCY 1 cut(s) 3979
PscI ACATGT 3 cut(s) 848, 2314, 3612
PshBI ATTAAT 2 cut(s) 2382, 3471
Psp124BI GAGCTC 2 cut(s) 1054, 2487
Psp5II RGGWCCY 1 cut(s) 3979
Psp6I CCWGG 5 cut(s) 822, 929, 1608, 1927, 3082
PspCI CACGTG 1 cut(s) 3041
PspFI CCCAGC 4 cut(s) 1633, 2213, 3307, 3429
PspGI CCWGG 5 cut(s) 822, 929, 1608, 1927, 3082
PspN4I GGNNCC 3 cut(s) 3512, 3567, 3980
PspOMI GGGCCC 1 cut(s) 3565
PspPI GGNCC 7 cut(s) 1833, 2227, 3293, 3511, 3565, 3566, 3979
PspPPI RGGWCCY 1 cut(s) 3979
PstI CTGCAG 1 cut(s) 111
PstNI CAGNNNCTG 1 cut(s) 2335
PsuI RGATCY 1 cut(s) 2898
RsaI GTAC 7 cut(s) 41, 454, 886, 1557, 2632, 2733, 3290
RsaNI GTAC 7 cut(s) 40, 453, 885, 1556, 2631, 2732, 3289
RseI CAYNNNNRTG 3 cut(s) 1083, 1564, 3862
SacI GAGCTC 2 cut(s) 1054, 2487
SatI GCNGC 9 cut(s) 107, 135, 268, 976, 3159, 3312, 3378, 3639, 3946
Sau96I GGNCC 7 cut(s) 1833, 2227, 3293, 3511, 3565, 3566, 3979
SchI GAGTC 9 cut(s) 495, 754, 943, 1340, 2837, 3017, 3638, 3748, 4102
ScrFI CCNGG 7 cut(s) 442, 824, 931, 1610, 1929, 3084, 3841
SduI GDGCHC 5 cut(s) 318, 1054, 2487, 3361, 3569
SexAI ACCWGGT 1 cut(s) 1927
SfaNI GCATC 8 cut(s) 217, 1084, 1294, 1606, 2068, 2684, 2740, 3510
SfcI CTRYAG 1 cut(s) 107
SinI GGWCC 5 cut(s) 1833, 2227, 3293, 3511, 3979
SmiMI CAYNNNNRTG 3 cut(s) 1083, 1564, 3862
SmlI CTYRAG 7 cut(s) 127, 1093, 1187, 2416, 3392, 3410, 3593
SmoI CTYRAG 7 cut(s) 127, 1093, 1187, 2416, 3392, 3410, 3593
SseBI AGGCCT 1 cut(s) 1608
SspI AATATT 3 cut(s) 1537, 2086, 3453
SstI GAGCTC 2 cut(s) 1054, 2487
StuI AGGCCT 1 cut(s) 1608
StyD4I CCNGG 7 cut(s) 440, 822, 929, 1608, 1927, 3082, 3839
StyI CCWWGG 2 cut(s) 873, 1559
TaiI ACGT 7 cut(s) 633, 1102, 1446, 1742, 1980, 2926, 3043
TaqI TCGA 7 cut(s) 192, 325, 859, 1876, 2565, 2715, 2790
TatI WGTACW 3 cut(s) 39, 452, 2630
TauI GCSGC 4 cut(s) 270, 978, 3161, 3380
TscAI CASTG 3 cut(s) 909, 1372, 1974
TseFI GTSAC 8 cut(s) 1698, 2432, 2647, 2950, 3586, 3608, 3751, 3855
TseI GCWGC 5 cut(s) 106, 134, 3311, 3638, 3945
Tsp45I GTSAC 8 cut(s) 1698, 2432, 2647, 2950, 3586, 3608, 3751, 3855
TspGWI ACGGA 9 cut(s) 308, 1145, 2336, 2568, 2678, 2815, 3461, 3703, 4074
TspRI CASTG 3 cut(s) 909, 1372, 1974
Vha464I CTTAAG 2 cut(s) 127, 1187
VpaK11BI GGWCC 5 cut(s) 1833, 2227, 3293, 3511, 3979
VspI ATTAAT 2 cut(s) 2382, 3471
XagI CCTNNNNNAGG 2 cut(s) 877, 1763
XapI RAATTY 8 cut(s) 251, 469, 2636, 2654, 2762, 2828, 3047, 3254
XceI RCATGY 7 cut(s) 852, 1385, 1694, 2318, 2742, 3494, 3616
XcmI CCANNNNNNNNNTGG 2 cut(s) 2135, 2221
XmiI GTMKAC 1 cut(s) 1322
XmnI GAANNNNTTC 4 cut(s) 522, 573, 1493, 2325
ZraI GACGTC 2 cut(s) 1100, 2924
Zsp2I ATGCAT 3 cut(s) 1383, 1395, 1621
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.