Rw5G010860

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Forward (+)
11983202 .. 11995843
12642 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G010860.1

Sequence Viewer

Length: 4131 bp
ATGGAGCTTCTTTCAAAGATTGTGGAGTACCCGATTGAACTTGTTGGACGTCTACTGGGACGCCAAGTGGGTTATGTAATTCACTGCAGAACCAACATTCAAAAGCTACAGGATCAAGTGACAGAATTGAAAGCTGCCAGAGAGACGATAAAGTATAAGGTTGCTGAAGCTGAAACAAAAGGTGAAAAAATACGACATGATGTCGAGTTGTGGCTGACAACAGTGGACGAGATCACTGCAAAGGCGGACGAATTGTTGAATGACGAAAGCCAAGCAAAGCTGAAATGTCTCCATGGCTTTTGTCCTAATCTGACTGTCCGTCATCAGATAAGCAGGAAATCAACAAAATTGGTTGAGGAGGTTGTTGAACAGTATGGAAAAAAAGAATTCCCCCAAGTTTCGTGTGGTAATTTACGGAAGGAGGTATTGGATGTAACTACCGGAGATTACCAGGTCTTTGAATCAAGGATGTTAATTGTTAAGGACATCATGGATAGTCTGAAAGTCTCTGATATTCAGAGGATTGGGGTGTGTGGAATTGGAGGAGTGGGTAAAACCACATTGGTCAAACAAGTTTACAGGCACGCTTCAGAAGATAAACAGTTATTTGATAATGTGGTTATGCTATTAGATGTGAAAAGTAATCCAGACCTGGAATTAATTCAAAAGAAAATTGTTGAGAAGCTGGGTATGGACATTCTTGATAATGAAACGATAGACGGAAGAGCGAGCCGTCTATGTGCCAGGATACAAGGAAAAAACGTTCTTGTGATTTTGGATGATGTTCAAGAAAAAATGGATTTGGAGGTTGTGGGACTTCCTCGTCTGCCAACTTGTAAAATTTTGTTGACATGCAGAACTCGAGATGTTTTATCTTTTGATAAGATGCAGGCGGACAAAGTCTTTCAGCTTGATCTTTTAGGTAAAGAAGAAACTTGGAGTTTGTTTGTGAAGATGGCAGGTGACGTCATTAAACACGATAGTCATATTCGAGATGTAGCAATCCAAGTAGCCGAAAAATGTGGAGGTTTGCCCTTATTAATCATCACGGTTGCAAGTGCTTTAAAAGAGAGGGAAAAATTAGCCGCATGGAGAGATGCCTTAAGACAATTAAAAGGGTTTGACAGAGAAGATTCGACAGAAAAGGCATACCTGGCGCTAGAGTGGAGTTACAATCAATTGGATGATAAGGAGCTAAAACCATTGTTCTTGCTATGTGGAATCATGGCAGAGCAGAACCATATTTATAGGCAGTACCTGTTGATATATGGTATGGGTTTAGGTTTGTTTAAAAGAGTCTATACAGTGGAAGTAGCCCGGGATAGATTGGATTCACTACTTGAAAAACTTAAAGATTCTTGTTTGTTGATGGACAGTGATGTTGATGGAAAGGTGAGAATGCATGATCTTGTATGTCATGTTGCTAACCGGATTGCATATAGAGATCAGCACGTGCTATCAACAAAATATGGAGACGAGTTGGTAGAATGGCCAAGTGAGGATTTCTTAAAGAAGTGCACTAAGATCTTTCTCTCGCACAACATAATTCCCACACTTCCTGAAGTTCCTTTGGACTGCCCAGAACTACAACTCCTCCTTATTCATAGTAAATCTTACTCACAGGAAATTCCATCCAACTTTTTTAGCAAGATGCAGGAACTGAGAGTTCTGGATTTAACCCACATGCGTATGTCATCATTACCTGTATCTCTTCAATACTTGAAGAAGCTTAAAACGTTGTGTTTAGATGGATGCACATTGGGAGATATAACTCTACTTGGCCAGTTAAGTAGCTTGGAAATTCTTAGCTTTTTACAATCCAATGTTAGAGAATTGCCTAAAGAAATAGGGCAATTGACTCGTCTTCGGTTGTTGGATTTATGTGATTGCACTGAACTTGTAGTGATTTCACCTACTGTTATATCAAGCTTGGTGAGACTGGAAGATTTGAGAATGAGAAACAGTTTTAACAAATGGGTGGTTGAAGGTGAAGGAAGTAATGCAAGCCTTTCGGAGCTGAAGCATTTGTCTCAGCTATCTGCATTAGAAATCCATATTCCCAATGTTGATGTTCTTCCGCCAAACTTGTTCTCGCACAAGTTAGAAAGATTCAATATTTCTATTGGGGACGTATGGGTGCAGAAAGATTTCTGGAGGAAACTTATGGATAAGACGCACCTTAACACACTGGAACTCAAGCTCACTAGCAACATCGAAGAATTGGATGAAGCTCTAAAATTGTTGCTGAAGCGAACTGAAGACTTGTCTTTAGATGAGACGGAGTGTGTTATTAGTATTGTCCAACAATTGGATGCCGAATATTTTGAGAATTTGAAACATCTCCGACTCCAAAACAGTATTGCCTTTACAGATATCATTAATCGGAAGGTTGTATTCTCCAACTTGGTAACCTTGATAGTGCATGGATGTGACAATTTGAGACTTTTGCTCTCATTTTCTATGGCTAGAAGTCTTGTACAACTCGCAGATCTAAAGATATCCAATTGTGAACTCATGCAAGAGATTATATCGTCAACAAAAGAATGTGGTGAAGATAATATGGATATCATCCTTTCCAAACTTAAAGTTTTGAAGCTTGATGAACTTCCAAACCTCGTTAGATTCAGCACAGGAAATCATATTGAATTTCCAGCCTTGGAAGAACTGAGGATAGAGGATTGCGATAAACTGTTGGAATTCATTAGTGATAAAGTTGCTATGAGTAGTGAAGATAGTAGAGTGTGCACAGAAATTGGACAGTGGGTCTTGAAAGAGGAAGAGAAGCTTGATGTTAAGAGCGAGACTGTTGTCCAATATTTCCTCTTTGACAAAAAGGTAGGATTTCCTAGCTTGGAGAGATTGAACATCAAAGGGGCAAGGGGCTTGAAGGCAATTTGGCACGTCCAACTATCTCAAAACTCTTTTTGGAGACTCAAGCAAGTTGAGGTTCGGGAATGTGACAATCTAATAAGTTTGTTTCCACCTAATGTCATGAGAAGATTGAATACGCTGGAAACCTTGAAGATACGGAACTGCAAATCACTAGAAGTGGTATGTGAGGAAATTGTTGTTGCAGAAGAGGAACAAGAAGTTGTAGAAACAACACCTTCTCCATTTGTATTTCCAAAAGTAACATCCGTGGAGTTGGTGATTCTACCTCAGCTTACGGGTTGCATAAATGCTTCACAGTGGCCATCACTCAAACGATTGGAGGTGGAGGGATGTGATAAAGTGGGAATTTTTGCCACAGAATTTTCTCACTTTAGAAAGAAATATGAGATGGAGCCTCTAATGACGTCTCAAAAGCCTCTATTTCTAACCGACAAGGATTCGTTCCTCGACTTGGAACACTTACCATTGTTTGGCATGGAAATTTGGGATGGACCACCCCCAGCGGATCAGTTGGTGTTTGGCAAATTAAAATCAATCTGCTTTAATGGGAATTGTGCACCTTTCTCCAAGCAAGCTTCGGTCCTTTTCCTCCAGAGATTACAAAATCTTGAAGAAATTGAAATGCGAGACAACTCTTACGAAAGAATTAGTGGTTGCACTACTAGGGAAGAAATACATGATGATGCAGTTGGGAGTGGGACCCTCCCCCGTGTAAGGAGTTTGTGGCTGTCCCGTATGGACCAACTGATGGATCTAGAGAACGACAACTCCCGATCACTACTTTTTCCAAATTTGGAAACCCTTACGCTGAGCTTTTGTTCCAGATTAAAAAGTATAGAGTCATCCGCAATATCCTTCCGGAATCTTACAACTTTGAAAGTATGGCATTGTCATGGATTTGAATATATAACAAGTTATTCAGTGGCCAAAAGCTTAGTGCAACTCAAAACATTGGAGGTGGCCGTCTGTCAAAGTGTTGTAGTGATAGTGGCAAGCAATGTGGGAGACAATGATGCTGATGATGCCCCTGGAAGTGAGATTGTTTTCAGCCACTTGCAACATTTGAGTCTATTTGATCTACGTAGGCTACAAGGCTTTTCCTCCGAAAATTGCCCAGTCAAATTCCCATCCTCCGTGACCGTAGAAGTATATGAATGCCCGATCAAGTTGAAGATTTCCCCTGATGGGGTCCTCCTAATTAACAGTAATAGAGGATCAATGCGAGCAAAAAGGAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1376

Amino Acids

156.81

Weight (kDa)

5.61

Isoelectric Point (pI)

41.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 160 - 321 1.3e-26 NB-ARC domain
LRR_14 PF23598 593 - 834 2.6e-06 Leucine-rich repeat region
LRR_RPS2 PF23247 778 - 906 2.7e-15 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 952 - 1077 2.9e-17 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1115 - 1243 3.8e-09 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1248 - 1350 5.4e-09 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 950
AasI GACNNNNNNGTC 1 cut(s) 822
AatII GACGTC 3 cut(s) 52, 969, 3299
Acc36I ACCTGC 1 cut(s) 950
AccB7I CCANNNNNTGG 3 cut(s) 2308, 3362, 3640
AccI GTMKAC 1 cut(s) 52
AccIII TCCGGA 1 cut(s) 3750
AciI CCGC 6 cut(s) 245, 893, 1086, 2078, 3395, 3738
AclI AACGTT 2 cut(s) 762, 1736
AclWI GGATC 4 cut(s) 120, 3405, 3651, 4114
AcoI YGGCCR 5 cut(s) 1490, 1780, 3191, 3816, 3852
AcuI CTGAAG 6 cut(s) 186, 573, 1581, 2039, 2267, 2277
AcvI CACGTG 1 cut(s) 1453
AcyI GRCGYC 4 cut(s) 49, 61, 966, 3296
AfaI GTAC 3 cut(s) 29, 1256, 2478
AfiI CCNNNNNNNGG 7 cut(s) 2308, 3343, 3362, 3606, 3640, 4077, 4078
AflII CTTAAG 1 cut(s) 1102
AhdI GACNNNNNGTC 3 cut(s) 200, 318, 2762
AjiI CACGTC 1 cut(s) 2902
AjnI CCWGG 5 cut(s) 450, 651, 743, 1152, 3919
AjuI GAANNNNNNNTTGG 2 cut(s) 410, 442
AloI GAACNNNNNNTCC 6 cut(s) 747, 779, 1575, 1607, 3644, 3676
Alw21I GWGCWC 3 cut(s) 1520, 2747, 3451
Alw44I GTGCAC 3 cut(s) 1516, 2743, 3447
AlwI GGATC 4 cut(s) 120, 3405, 3651, 4114
AlwNI CAGNNNCTG 2 cut(s) 1258, 1660
Ama87I CYCGRG 2 cut(s) 861, 1317
Aor13HI TCCGGA 1 cut(s) 3750
AoxI GGCC 5 cut(s) 1490, 1780, 3191, 3816, 3852
ApaLI GTGCAC 3 cut(s) 1516, 2743, 3447
ApeKI GCWGC 1 cut(s) 134
AseI ATTAAT 3 cut(s) 659, 1040, 2379
Asp700I GAANNNNTTC 2 cut(s) 660, 2147
AspLEI GCGC 1 cut(s) 1159
AspS9I GGNCC 5 cut(s) 3383, 3472, 3591, 3631, 4081
AsuC2I CCSGG 2 cut(s) 1318, 1319
AsuHPI GGTGA 8 cut(s) 194, 974, 1405, 1902, 1945, 2000, 2561, 3160
AvaI CYCGRG 2 cut(s) 861, 1317
AvaII GGWCC 5 cut(s) 3383, 3472, 3591, 3631, 4081
BaeGI GKGCMC 3 cut(s) 1520, 2747, 3451
BalI TGGCCA 4 cut(s) 1492, 1782, 3193, 3818
BarI GAAGNNNNNNTAC 2 cut(s) 2989, 3021
BbrPI CACGTG 1 cut(s) 1453
BbsI GAAGAC 2 cut(s) 1856, 2265
Bbv12I GWGCWC 3 cut(s) 1520, 2747, 3451
BbvCI CCTCAGC 1 cut(s) 3159
BbvI GCAGC 1 cut(s) 121
BceAI ACGGC 2 cut(s) 717, 3839
BcgI CGANNNNNNTGC 6 cut(s) 218, 252, 1841, 1875, 1992, 2026
BciT130I CCWGG 5 cut(s) 452, 653, 745, 1154, 3921
BciVI GTATCC 1 cut(s) 741
BcnI CCSGG 2 cut(s) 1318, 1319
BfaI CTAG 7 cut(s) 1160, 2205, 2466, 2847, 3044, 3555, 3647
BfmI CTRYAG 2 cut(s) 85, 107
BfoI RGCGCY 1 cut(s) 1160
BfrI CTTAAG 1 cut(s) 1102
BfuAI ACCTGC 1 cut(s) 950
BfuI GTATCC 1 cut(s) 741
BglII AGATCT 2 cut(s) 1524, 2488
BisI GCNGC 2 cut(s) 135, 1086
BlpI GCTNAGC 1 cut(s) 3701
BlsI GCNGC 2 cut(s) 136, 1087
Bme1390I CCNGG 7 cut(s) 452, 653, 745, 1154, 1318, 1319, 3921
Bme18I GGWCC 5 cut(s) 3383, 3472, 3591, 3631, 4081
BmeRI GACNNNNNGTC 3 cut(s) 200, 318, 2762
BmeT110I CYCGRG 2 cut(s) 861, 1317
BmgBI CACGTC 1 cut(s) 2902
BmgT120I GGNCC 5 cut(s) 3383, 3472, 3591, 3631, 4081
BmiI GGNNCC 4 cut(s) 3285, 3592, 3593, 4082
BmrFI CCNGG 7 cut(s) 452, 653, 745, 1154, 1318, 1319, 3921
BmrI ACTGGG 2 cut(s) 65, 4001
BmsI GCATC 8 cut(s) 876, 1087, 1641, 1742, 2302, 3565, 3895, 3904
BmuI ACTGGG 2 cut(s) 65, 4001
BoxI GACNNNNGTC 1 cut(s) 2807
BpiI GAAGAC 2 cut(s) 1856, 2265
BpmI CTGGAG 2 cut(s) 2173, 3467
Bpu10I CCTNAGC 1 cut(s) 3159
Bpu1102I GCTNAGC 1 cut(s) 3701
BpuEI CTTGAG 2 cut(s) 2180, 2918
BpuMI CCSGG 2 cut(s) 1318, 1319
BsaAI YACGTR 2 cut(s) 1453, 3974
BsaHI GRCGYC 4 cut(s) 49, 61, 966, 3296
BsaJI CCNNGG 5 cut(s) 292, 1317, 2655, 3138, 3919
BsaWI WCCGGW 3 cut(s) 440, 1428, 3750
BsaXI ACNNNNNCTCC 8 cut(s) 1575, 1578, 1605, 1608, 3094, 3124, 3644, 3674
Bsc4I CCNNNNNNNGG 7 cut(s) 2308, 3343, 3362, 3606, 3640, 4077, 4078
Bse1I ACTGG 5 cut(s) 60, 1783, 1944, 2193, 4007
Bse3DI GCAATG 1 cut(s) 3895
BseAI TCCGGA 1 cut(s) 3750
BseBI CCWGG 5 cut(s) 452, 653, 745, 1154, 3921
BseDI CCNNGG 5 cut(s) 292, 1317, 2655, 3138, 3919
BseLI CCNNNNNNNGG 7 cut(s) 2308, 3343, 3362, 3606, 3640, 4077, 4078
BseMI GCAATG 1 cut(s) 3895
BseMII CTCAG 5 cut(s) 1652, 2045, 2657, 3173, 3692
BseNI ACTGG 5 cut(s) 60, 1783, 1944, 2193, 4007
BseRI GAGGAG 3 cut(s) 371, 558, 1583
BseSI GKGCMC 3 cut(s) 1520, 2747, 3451
BseXI GCAGC 1 cut(s) 121
BseYI CCCAGC 2 cut(s) 685, 3391
BsgI GTGCAG 1 cut(s) 2159
BshFI GGCC 5 cut(s) 1492, 1782, 3193, 3818, 3854
BsiHKAI GWGCWC 3 cut(s) 1520, 2747, 3451
BsiHKCI CYCGRG 2 cut(s) 861, 1317
BsiSI CCGG 4 cut(s) 441, 1318, 1429, 3751
BslFI GGGAC 5 cut(s) 72, 828, 2141, 3604, 3607
BslI CCNNNNNNNGG 7 cut(s) 2308, 3343, 3362, 3606, 3640, 4077, 4078
BsmBI CGTCTC 4 cut(s) 137, 1467, 2270, 3303
BsmFI GGGAC 5 cut(s) 72, 828, 2141, 3604, 3607
BsmI GAATGC 2 cut(s) 1404, 4052
BsnI GGCC 5 cut(s) 1492, 1782, 3193, 3818, 3854
BsoBI CYCGRG 2 cut(s) 861, 1317
Bsp1286I GDGCHC 3 cut(s) 1520, 2747, 3451
Bsp13I TCCGGA 1 cut(s) 3750
Bsp1407I TGTACA 1 cut(s) 2476
Bsp1720I GCTNAGC 1 cut(s) 3701
Bsp19I CCATGG 1 cut(s) 292
BspACI CCGC 6 cut(s) 245, 893, 1086, 2078, 3395, 3738
BspANI GGCC 5 cut(s) 1492, 1782, 3193, 3818, 3854
BspCNI CTCAG 5 cut(s) 1653, 2044, 2658, 3172, 3693
BspEI TCCGGA 1 cut(s) 3750
BspHI TCATGA 1 cut(s) 2991
BspLI GGNNCC 4 cut(s) 3285, 3592, 3593, 4082
BspMAI CTGCAG 1 cut(s) 89
BspMI ACCTGC 1 cut(s) 950
BspPI GGATC 4 cut(s) 120, 3405, 3651, 4114
BspQI GCTCTTC 1 cut(s) 718
BspTI CTTAAG 1 cut(s) 1102
BsrDI GCAATG 1 cut(s) 3895
BsrGI TGTACA 1 cut(s) 2476
BsrI ACTGG 5 cut(s) 60, 1783, 1944, 2193, 4007
BssECI CCNNGG 5 cut(s) 292, 1317, 2655, 3138, 3919
BssNI GRCGYC 4 cut(s) 49, 61, 966, 3296
BssT1I CCWWGG 2 cut(s) 292, 2655
Bst2UI CCWGG 5 cut(s) 452, 653, 745, 1154, 3921
Bst6I CTCTTC 4 cut(s) 718, 1716, 2772, 3072
BstACI GRCGYC 4 cut(s) 49, 61, 966, 3296
BstAFI CTTAAG 1 cut(s) 1102
BstAUI TGTACA 1 cut(s) 2476
BstBAI YACGTR 2 cut(s) 1453, 3974
BstC8I GCNNGC 7 cut(s) 585, 730, 891, 2005, 3465, 3886, 4116
BstDEI CTNAG 8 cut(s) 1521, 1661, 1805, 2031, 2666, 3159, 3701, 3826
BstDSI CCRYGG 2 cut(s) 292, 3138
BstEII GGTNACC 1 cut(s) 2407
BstH2I RGCGCY 1 cut(s) 1160
BstHHI GCGC 1 cut(s) 1159
BstMWI GCNNNNNNNGC 2 cut(s) 1154, 3914
BstNI CCWGG 5 cut(s) 452, 653, 745, 1154, 3921
BstNSI RCATGY 2 cut(s) 855, 1687
BstPAI GACNNNNGTC 1 cut(s) 2807
BstPI GGTNACC 1 cut(s) 2407
BstSCI CCNGG 7 cut(s) 450, 651, 743, 1152, 1316, 1317, 3919
BstSFI CTRYAG 2 cut(s) 85, 107
BstSLI GKGCMC 3 cut(s) 1520, 2747, 3451
BstSNI TACGTA 1 cut(s) 3974
BstV1I GCAGC 1 cut(s) 121
BstV2I GAAGAC 2 cut(s) 1856, 2265
BstX2I RGATCY 3 cut(s) 1524, 2488, 3643
BstYI RGATCY 3 cut(s) 1524, 2488, 3643
BsuI GTATCC 1 cut(s) 741
BsuRI GGCC 5 cut(s) 1492, 1782, 3193, 3818, 3854
BtgI CCRYGG 2 cut(s) 292, 3138
BtrI CACGTC 1 cut(s) 2902
BtsI GCAGTG 2 cut(s) 82, 234
BveI ACCTGC 1 cut(s) 950
Cac8I GCNNGC 7 cut(s) 585, 730, 891, 2005, 3465, 3886, 4116
CaiI CAGNNNCTG 2 cut(s) 1258, 1660
CciI TCATGA 1 cut(s) 2991
CfoI GCGC 1 cut(s) 1159
Cfr13I GGNCC 5 cut(s) 3383, 3472, 3591, 3631, 4081
Cfr9I CCCGGG 1 cut(s) 1317
CseI GACGC 2 cut(s) 69, 2182
CsiI ACCWGGT 1 cut(s) 450
Csp6I GTAC 3 cut(s) 28, 1255, 2477
CspCI CAANNNNNGTGG 3 cut(s) 38, 3873, 3908
CviQI GTAC 3 cut(s) 28, 1255, 2477
DdeI CTNAG 8 cut(s) 1521, 1661, 1805, 2031, 2666, 3159, 3701, 3826
DraI TTTAAA 2 cut(s) 1065, 1291
DrdI GACNNNNNNGTC 1 cut(s) 822
DriI GACNNNNNGTC 3 cut(s) 200, 318, 2762
DseDI GACNNNNNNGTC 1 cut(s) 822
EaeI YGGCCR 5 cut(s) 1490, 1780, 3191, 3816, 3852
Eam1104I CTCTTC 4 cut(s) 718, 1716, 2772, 3072
Eam1105I GACNNNNNGTC 3 cut(s) 200, 318, 2762
EarI CTCTTC 4 cut(s) 718, 1716, 2772, 3072
EciI GGCGGA 3 cut(s) 260, 908, 2067
Eco105I TACGTA 1 cut(s) 3974
Eco130I CCWWGG 2 cut(s) 292, 2655
Eco32I GATATC 3 cut(s) 2374, 2499, 2566
Eco47I GGWCC 5 cut(s) 3383, 3472, 3591, 3631, 4081
Eco57I CTGAAG 6 cut(s) 186, 573, 1581, 2039, 2267, 2277
Eco72I CACGTG 1 cut(s) 1453
Eco88I CYCGRG 2 cut(s) 861, 1317
Eco91I GGTNACC 1 cut(s) 2407
EcoO109I RGGNCCY 2 cut(s) 3591, 4081
EcoO65I GGTNACC 1 cut(s) 2407
EcoRI GAATTC 2 cut(s) 386, 2696
EcoRII CCWGG 5 cut(s) 450, 651, 743, 1152, 3919
EcoRV GATATC 3 cut(s) 2374, 2499, 2566
EcoT14I CCWWGG 2 cut(s) 292, 2655
EcoT22I ATGCAT 1 cut(s) 1404
ErhI CCWWGG 2 cut(s) 292, 2655
Esp3I CGTCTC 4 cut(s) 137, 1467, 2270, 3303
FalI AAGNNNNNCTT 2 cut(s) 2769, 2801
FaqI GGGAC 5 cut(s) 72, 828, 2141, 3604, 3607
FblI GTMKAC 1 cut(s) 52
Fnu4HI GCNGC 2 cut(s) 135, 1086
Fsp4HI GCNGC 2 cut(s) 135, 1086
FspBI CTAG 7 cut(s) 1160, 2205, 2466, 2847, 3044, 3555, 3647
GlaI GCGC 1 cut(s) 1158
GluI GCNGC 2 cut(s) 135, 1086
GsaI CCCAGC 2 cut(s) 689, 3395
GsuI CTGGAG 2 cut(s) 2173, 3467
HaeII RGCGCY 1 cut(s) 1160
HaeIII GGCC 5 cut(s) 1492, 1782, 3193, 3818, 3854
HapII CCGG 4 cut(s) 441, 1318, 1429, 3751
HgaI GACGC 2 cut(s) 69, 2182
HhaI GCGC 1 cut(s) 1159
Hin1I GRCGYC 4 cut(s) 49, 61, 966, 3296
Hin6I GCGC 1 cut(s) 1157
HinP1I GCGC 1 cut(s) 1157
HincII GTYRAC 2 cut(s) 849, 2535
HindII GTYRAC 2 cut(s) 849, 2535
HindIII AAGCTT 6 cut(s) 1727, 1927, 2594, 2783, 3465, 3823
HpaII CCGG 4 cut(s) 441, 1318, 1429, 3751
HphI GGTGA 8 cut(s) 194, 974, 1405, 1902, 1945, 2000, 2561, 3160
Hpy166II GTNNAC 9 cut(s) 53, 226, 577, 849, 1518, 2510, 2535, 2745, 3449
Hpy8I GTNNAC 9 cut(s) 53, 226, 577, 849, 1518, 2510, 2535, 2745, 3449
HpyAV CCTTC 7 cut(s) 412, 1979, 1985, 2380, 2881, 3117, 3757
HpyCH4IV ACGT 9 cut(s) 49, 762, 966, 1452, 1736, 2130, 2901, 3296, 3973
HpyF10VI GCNNNNNNNGC 2 cut(s) 1154, 3914
HpyF3I CTNAG 8 cut(s) 1521, 1661, 1805, 2031, 2666, 3159, 3701, 3826
HpySE526I ACGT 9 cut(s) 49, 762, 966, 1452, 1736, 2130, 2901, 3296, 3973
Hsp92I GRCGYC 4 cut(s) 49, 61, 966, 3296
HspAI GCGC 1 cut(s) 1157
KflI GGGWCCC 1 cut(s) 3591
Kpn2I TCCGGA 1 cut(s) 3750
LguI GCTCTTC 1 cut(s) 718
LmnI GCTCC 4 cut(s) 4, 1192, 2014, 3283
Lsp1109I GCAGC 1 cut(s) 121
LweI GCATC 8 cut(s) 876, 1087, 1641, 1742, 2302, 3565, 3895, 3904
MabI ACCWGGT 1 cut(s) 450
MaeI CTAG 7 cut(s) 1160, 2205, 2466, 2847, 3044, 3555, 3647
MaeII ACGT 9 cut(s) 49, 762, 966, 1452, 1736, 2130, 2901, 3296, 3973
MaeIII GTNAC 9 cut(s) 118, 433, 962, 1169, 2407, 2429, 2957, 3130, 4027
MfeI CAATTG 4 cut(s) 1178, 1853, 2306, 2503
MflI RGATCY 3 cut(s) 1524, 2488, 3643
MhlI GDGCHC 3 cut(s) 1520, 2747, 3451
MlsI TGGCCA 4 cut(s) 1492, 1782, 3193, 3818
MluNI TGGCCA 4 cut(s) 1492, 1782, 3193, 3818
MlyI GAGTC 6 cut(s) 1305, 1852, 2340, 2925, 3740, 3967
MmeI TCCRAC 8 cut(s) 25, 1659, 1854, 2326, 2368, 2424, 2673, 2929
Mox20I TGGCCA 4 cut(s) 1492, 1782, 3193, 3818
Mph1103I ATGCAT 1 cut(s) 1404
MroI TCCGGA 1 cut(s) 3750
MroXI GAANNNNTTC 2 cut(s) 660, 2147
MscI TGGCCA 4 cut(s) 1492, 1782, 3193, 3818
MslI CAYNNNNRTG 4 cut(s) 1688, 2427, 3573, 3783
Msp20I TGGCCA 4 cut(s) 1492, 1782, 3193, 3818
MspA1I CMGCKG 1 cut(s) 3395
MspCI CTTAAG 1 cut(s) 1102
MspI CCGG 4 cut(s) 441, 1318, 1429, 3751
MspR9I CCNGG 7 cut(s) 452, 653, 745, 1154, 1318, 1319, 3921
MunI CAATTG 4 cut(s) 1178, 1853, 2306, 2503
Mva1269I GAATGC 2 cut(s) 1404, 4052
MvaI CCWGG 5 cut(s) 452, 653, 745, 1154, 3921
MwoI GCNNNNNNNGC 2 cut(s) 1154, 3914
NciI CCSGG 2 cut(s) 1318, 1319
NcoI CCATGG 1 cut(s) 292
NlaIV GGNNCC 4 cut(s) 3285, 3592, 3593, 4082
NmuCI GTSAC 5 cut(s) 118, 962, 2429, 2957, 4027
NsiI ATGCAT 1 cut(s) 1404
NspI RCATGY 2 cut(s) 855, 1687
PaeR7I CTCGAG 1 cut(s) 861
PagI TCATGA 1 cut(s) 2991
PaqCI CACCTGC 1 cut(s) 950
PciSI GCTCTTC 1 cut(s) 718
PctI GAATGC 2 cut(s) 1404, 4052
PdmI GAANNNNTTC 2 cut(s) 660, 2147
PflFI GACNNNGTC 1 cut(s) 899
PflMI CCANNNNNTGG 3 cut(s) 2308, 3362, 3640
PkrI GCNGC 2 cut(s) 136, 1087
PleI GAGTC 6 cut(s) 1304, 1852, 2340, 2925, 3739, 3966
PmaCI CACGTG 1 cut(s) 1453
PmlI CACGTG 1 cut(s) 1453
PpsI GAGTC 6 cut(s) 1304, 1852, 2340, 2925, 3739, 3966
Ppu21I YACGTR 2 cut(s) 1453, 3974
PpuMI RGGWCCY 2 cut(s) 3591, 4081
PshAI GACNNNNGTC 1 cut(s) 2807
PshBI ATTAAT 3 cut(s) 659, 1040, 2379
Psp1406I AACGTT 2 cut(s) 762, 1736
Psp5II RGGWCCY 2 cut(s) 3591, 4081
Psp6I CCWGG 5 cut(s) 450, 651, 743, 1152, 3919
PspCI CACGTG 1 cut(s) 1453
PspEI GGTNACC 1 cut(s) 2407
PspFI CCCAGC 2 cut(s) 685, 3391
PspGI CCWGG 5 cut(s) 450, 651, 743, 1152, 3919
PspN4I GGNNCC 4 cut(s) 3285, 3592, 3593, 4082
PspPI GGNCC 5 cut(s) 3383, 3472, 3591, 3631, 4081
PspPPI RGGWCCY 2 cut(s) 3591, 4081
PstI CTGCAG 1 cut(s) 89
PstNI CAGNNNCTG 2 cut(s) 1258, 1660
PsuI RGATCY 3 cut(s) 1524, 2488, 3643
PsyI GACNNNGTC 1 cut(s) 899
RsaI GTAC 3 cut(s) 29, 1256, 2478
RsaNI GTAC 3 cut(s) 28, 1255, 2477
RseI CAYNNNNRTG 4 cut(s) 1688, 2427, 3573, 3783
SapI GCTCTTC 1 cut(s) 718
SatI GCNGC 2 cut(s) 135, 1086
Sau96I GGNCC 5 cut(s) 3383, 3472, 3591, 3631, 4081
SchI GAGTC 6 cut(s) 1305, 1852, 2340, 2925, 3740, 3967
ScrFI CCNGG 7 cut(s) 452, 653, 745, 1154, 1318, 1319, 3921
SduI GDGCHC 3 cut(s) 1520, 2747, 3451
SexAI ACCWGGT 1 cut(s) 450
SfaNI GCATC 8 cut(s) 876, 1087, 1641, 1742, 2302, 3565, 3895, 3904
SfcI CTRYAG 2 cut(s) 85, 107
Sfr274I CTCGAG 1 cut(s) 861
SinI GGWCC 5 cut(s) 3383, 3472, 3591, 3631, 4081
SlaI CTCGAG 1 cut(s) 861
SmaI CCCGGG 1 cut(s) 1319
SmiMI CAYNNNNRTG 4 cut(s) 1688, 2427, 3573, 3783
SmlI CTYRAG 4 cut(s) 861, 1102, 2195, 2933
SmoI CTYRAG 4 cut(s) 861, 1102, 2195, 2933
SnaBI TACGTA 1 cut(s) 3974
SsiI CCGC 6 cut(s) 245, 893, 1086, 2078, 3395, 3738
SspI AATATT 3 cut(s) 2116, 2321, 2816
SspMI CTAG 7 cut(s) 1160, 2205, 2466, 2847, 3044, 3555, 3647
StyD4I CCNGG 7 cut(s) 450, 651, 743, 1152, 1316, 1317, 3919
StyI CCWWGG 2 cut(s) 292, 2655
TaiI ACGT 9 cut(s) 52, 765, 969, 1455, 1739, 2133, 2904, 3299, 3976
TaqI TCGA 6 cut(s) 204, 862, 991, 1136, 2214, 3339
TaqII GACCGA 1 cut(s) 3460
TatI WGTACW 1 cut(s) 2476
TauI GCSGC 1 cut(s) 1088
TseFI GTSAC 5 cut(s) 118, 962, 2429, 2957, 4027
TseI GCWGC 1 cut(s) 134
Tsp45I GTSAC 5 cut(s) 118, 962, 2429, 2957, 4027
TspDTI ATGAA 6 cut(s) 723, 1592, 2241, 2616, 2689, 4059
TspGWI ACGGA 7 cut(s) 308, 430, 735, 2294, 3043, 3127, 4015
TspMI CCCGGG 1 cut(s) 1317
Tth111I GACNNNGTC 1 cut(s) 899
Van91I CCANNNNNTGG 3 cut(s) 2308, 3362, 3640
Vha464I CTTAAG 1 cut(s) 1102
VneI GTGCAC 3 cut(s) 1516, 2743, 3447
VpaK11BI GGWCC 5 cut(s) 3383, 3472, 3591, 3631, 4081
VspI ATTAAT 3 cut(s) 659, 1040, 2379
XbaI TCTAGA 1 cut(s) 3646
XceI RCATGY 2 cut(s) 855, 1687
XcmI CCANNNNNNNNNTGG 1 cut(s) 401
XhoI CTCGAG 1 cut(s) 861
XmaI CCCGGG 1 cut(s) 1317
XmiI GTMKAC 1 cut(s) 52
XmnI GAANNNNTTC 2 cut(s) 660, 2147
XspI CTAG 7 cut(s) 1160, 2205, 2466, 2847, 3044, 3555, 3647
ZraI GACGTC 3 cut(s) 50, 967, 3297
Zsp2I ATGCAT 1 cut(s) 1404
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.