Rh2AG005800

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0000042
Physical Location & Seq
Forward (+)
535902 .. 548337
12436 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG005800.1

Sequence Viewer

Length: 9525 bp
ATGGATTGTCTTTGTGCAATTGGTAAGACCGTTGTTGGAAAGATAGCCGAGTACACGGTTGAACCCTTGAAAAGCAACCTTCGAAATCTAGACGCTAAAGCGGCAGAATTGAAAGCTGCCCGAGAGTCGCTGGCTAATATGGTTGATGAAGCTGAAAGAAGAGGTGAAAGAATCGAATCCAATGTCGAATTGTGGCTGGAAAAAGCGAACATGATCCCTAGAGAAGCAGATGAGTTGTTGGAAGCAGTATATGAAGCCAAGCTGAAATGTCTCAATGGGTTTTGTCCTAATCTGGCAATCCGTCATCACCTAAGCAGGCGCTCAGCAAAATTTGTGACGGAGATTGTTGAACTTCTTGAAAAGCAACGAGGATTTTTCACAGTTTCATATCTTCCTCCTCAGGAAGAGGTATGTGTTATTACTCCCCGCGATTATCTAGCCTTTGAATCAAGAATTTCAGTTGTGAAGGAAATCATGGATGAATTGAAGAATTCTGAAACCAATATGCTTGGGGTGTATGGAATGGGAGGAGTGGGTAAAACCACACTGGTCAAAGAAGTTTATAAGCAAGCTGCAGAAGATAAATTGTTATTTGATGATGTGATTATCCTACTAGATGTGAAACTGTTTTCCGACTTGGAAGCATTTCAAAATAGAATTGTTGAAAAGTTGGGCATGGAGATTCTTCCCGATGAGACTCTGTATCGAAGAGCGAGCCGTCTATTTAGCAGAATGAAAAACAAAAGGACTCTTGTCATTTTAGATGGTGTTGAAGAAAGACTTGATTTAGAGGTTGTGGGACTTTTCCCTCTTCCAACTTGTAAGATATTGTTGACAAGTAGAACTCGAAGAGTTCTATCTTTGGAGATGCGTACGCAAAAGGAGTATCGCTTGGACGTTTTAGATAAAGAAGAGTCTTGGAGTCTTTTTGAGAAGATGGCTGGTGATGTTGTCAAACAGGATGGTCGTATACGAGATATAGCAATTCAAGTAGCTGGAAAATGTGGAGGTTTGCCCCTGTTAGTTGTCACAGTTGCAACTGCTTTAAAATATGAAAGTGGATTGCATATATGGAAAGACGCCTTGAGACGACTTAGAAGGTTTGACAAAAACGGAGAAACGTATAAAGCATACATGGCTCTTGAATGGAGTTACAGTAATCTGGATGATGAAGAGCTTAAACCATTGTTCTTGCTATGCGGGACTGTTGTAAGAGAGAACCATATTTGTTTGTCAGATTTGCTGAAATATTGTATGGGTTTAGGTTTGATTAAAAATGTTGATACAATGGCAGAAGCACAAGATGCGCTTCATAGCCTCATTGAAAAACTGAAAGATTCGTGTTTGTTGCTGGAAAGTGATATTGATGGCCTTGTCAAAATGCATGATCTTGTATGTCATGTTGCTAACCGGATTGCATACAGAGATCAACACGTCTTGTCAGTAGCATATAGAGATCAGTCGGAAGATTGGCCAGATAAAGAATTCTTTAAAAGGTGCACTATGATTTCTTTAGAATCCAGCCATATTTCCACGCTTTCGGAAATACCTTGGCAATGCCCAGAACTTCAAATGTTTCATTTGGTCGGTGAAGCTATATCGACTAACTCGGTGGAAATCCCATCCAACTTTTTTGGAGAGATGAAGAAACTCAAAGTGTTGCATTTTACCAACCTGCACATGCTGTCACTACCTCCATCTCTTCAATTTCTGAAGAATCTGCACATGCTGTGTGTAGACAAAAGCATATTGGGAGATGTTGCTTTAGTTGGGCAGCTTAGCAACTTAGAAATTCTTAGCTTTCGCCAATCCAGTGTTCAACAATTGCCTAAAGAAATAGGGAAATTGACTCGTCTTCGGTTGTTGGATTTATCTGATTGCTCTGAACTTGAAGTTATATCACCTGGTGTCATATCAAGCTTGGTGAGACTGGAAGAGTTGAGAATGAGAAACAGCTTTAACAAGTGGGAGGTTGAAGGTGAAAGAGGTAATGCGAACCTTTCAGAGCTGAAGCATTTGTCTCGGCTGTTCTCATTAGATATACATATTCCCAATGCCGACATTCTTCCAGCAAACTTATTCTCCTCCTGGAAGTTAGAAAGATTCGATATAATTATTGGGGATGCAGATGTGTGGGAGAAACTTGTGGCTAAGACGACCCTCAGCACACTAAAACTCAAGCTCACTACCAGCTTTGAACAATTGGAGGAAGACCTAAGACATCTGGTGGAAAGAACAGAAGACTTGTCCTTATATGGGGAGGGCGTTAATATTGTCCATCTACTAGATACTAAAAGTTTTGAGAACCTGAAACATCAGCAACTCCAAAGCCATGTGGACTTTACTCATATTGTAAACAGGAAGGTTGTGTTCCCCAACTTAACAACCTTGAGTAACTTGGAGATAGTTCAGTGTTCTAACATGGGGGCATTCATTGGTGATAACAAAATCTGGAAAAACATTGAAGAGAGGGACCCGGAAGAGAACCTTGATGTCAAAAGTGAGACTATTGGACAGTACTTCCTCTTTGACGGAAAGGCAGGGTTTCCTGGCTTGGAGAGACTGAAAATCAATCAGGCAAGCAAGTTGAAGACAATATGGCACATGCAACTTGCTCAAGACTCTTTTTGCAGGCTCAGACAGGTTGAGGTTTCCGAGTGCGTTAGTCTAATAAATGTCTTGCCACCTAGTATCATAGGAAGATTGAATGCTCTGGAAAAGTTAAGGATAGAGGATTGCAAGTCGCTAGAAGTAGTATTTGAACTAGACAGAGGATCTACTGTGAAAGAACCACATTTCGCATCCCCTCATGATCAGTTCGAGGTTTTTTACTGTCAAAATCTTGATTCAGTAAGGATATACAAGTGTGGCAGTTTGAAAAAGATTTTCCCGGCCTCTGTGGCCCAAGGTCTTCACCAGCTAGATCAGCTGAGTGTGGTATCTTGTAGTGGAGTGGAGGAAATTGTTGGTGAGGAAGAGGAAGAGGGAGAACTAGAAACAAAGCCTCTTCATTTTGTTTTCCCAAAAGTGACATCTGTGCAATTTGAAGCTATGCCCCGACTTAACAAGTTCTATCCTGGAATGCATGAATTACACTGGCCACTACTTAAAGAATTGAAGGCAACTGGATGTGATAAAGTGGAGATTTTTGACTCGGGAGTTTTATTCTTTCAGGGAAAGCATGAGCTGGATCCTCTAACTCAACGATCTCTCTTTCTAATTGACAAGGGTTCATTCCTCAACTTGGAATACTTGCAATTGGGCGCGAAGGAGATTTGGTACGGTCCATCCACAGCAAAGATGCTTGGAAAATTGAAGTCTGTTTCTTTTCGTGATTGTTCACCTTTCTCCAAGCAAGCTTCAATTCTTTTCCTTCAGGGATTACCAAATCTTGAAACAGTTGAAGTGATTGGGGGTCCTTCCAAAGAAATATGTATGAATGAAGGAGATGGTAGTAGTGGTGGTGGCGAAATACATGATGCAGTTGGCAGTTGGACCGTCCCAGGTGTAAGAGAATTGAAGCTCTACGGAATGGAGAATCTGATGCATGTAGGAGGAGGAGGGATGAAGGAGGATTCCGAATCAGCTGCTGCGAACCCACTTTTTCCAAACTTGCAAATTCTTGACGTGGAATGGTGTTCCAGATTAAAGAATCTTGAGTCATCCGCAACCTTCCAGAATCTAACAACTTTGAAAGTAATTGGTTGTAAGGGATTGGAATATTTAGCAACATATTCGGTGGCTAAAAGCTTAGTGCAACTCAGAACAATGGAAGTGAGGAGTTGTGAAAAAATTGTAGTAATAGTGGCAAGCAACGCTGTTGGAGATAATGATCCTGATGATGTATCAGAAAATGAGACTGCTTTCTGCCGATTGCAACGTCTGACACTTGCTGATCTACCAAGTCTACAAGGCTTTTGCTCCTCTGGAAATTGCATTGTAAAATTCTCATCCCCAATAACCTTAACAGTAGAATTCTGCCCAATCAAGTTGAAGATTTCCCCTGATGGGTTCCTCCTGAGCCAGCGATTGGCTGAGACAAGGATCTCAACCATGAAGAAAATCATGGATGAATTGAAGAATCCGAATACCATCAGGATCGGGGTGTGCGGAATTGCAGGTGTGGGAAAAACCACGCTTGTCAAAGAAGTTCATAAGCAAGCTACAAAAGATAAAAGGTTATTTGATGATGTGGTTATACTACTGGATATGAAAAGCAATGCAGACTTGGAAGGATTTCAAAAGAAAATTGTTGAGAAGTTGGGCATGGACATTCTTGACAATGACACCATTGATGGAAGAGCTAGTCGTCTAAGTGCCAGGATAAAGGACAAAAAGATTCTAGTAATTCTGGATGATGTTTGCGAACAAATTGACTTGGTGGCTGTCGGACTTCCTAGTGTGGCTGCTTGTAAGATATTGATGACATCTAGAATTAGGAAGACATTATCTGATATGAGTACGCAGAAAGAGTTTCTGCTTGACATTTTACAAGAAGAAGAGTCCTGGGTTTTATTTGAGGAGAAAGCAGGCGATGTTGTTAAGGATCCAGCTATACGAACAGTAGCAAAACAAGTTGCCAAAAATTGTTATGGTCTGCCTATTTTGGTGGTCACAGTGGCAAGTACTTTAAAGCAAAGAACTACTTTACCTCCGTGGACAGATGCTTTGACATGCTTGCAGGAAGGGTCTGATAGAGAAGAAGAATTGGCAGAAAAGGCACACTTGGGTCTAGAGTGGAGTTACAAACGGTTGAATGATAAGGAACTTCAGACATTGTTCTTGCTATGTGGGATTGCCATGCGGGGAAACAGTATTAGTTTGGCAGACTTGTTGAGGTATAGTATGAGTTTAGGTTTCTTCAAAAATACCTTCACAGTGGAGCAAGCACGGAAGGCATTGCTTTCACGGATTGAAAAGCTCAAAAGTTATTGTCTACTTATAGACAATGATGACAACAAATATGTTGGAATGCACGAGCTTGTACTCATTGTTGCTAACCGGATTGCATTCAGAGATGAACACATTTTATCATTAGTGGAAGATGGAGGTAACCGTGAGTTGAAAGAATGGCCAGACAAGTATTTTCTAGAGAAGTGCACAATCATGTTTCTCCCCTGTGGCAACAATATCCCAATGCTTCCTGAAATTATGCACTGCCCGGCTCAGACAATGTTTCATTTGCAAGGTGACCTAGATGATGACTCGCAGAAAATCTCACCTAGGTTTTTTGAAAAGATGAAAAATCTCCGAGTGCTGAGTTTGCGATGTATGACTATTCCAACACTACCTTCATCTCTTCAGTTCCTGAAAAATCTAGTTTTCCTATGTTTAGATCAGTGCATATTGGGAGACATCGCTTTAATTGGGGAGCTGAGTAACTTGGAAATCCTTTCGTTTTCGGAATCCAATGTCAAACAATTGCCTAGAGCAGTAGGGCAATTGACTCATCTTCGGTTGTTAGATTTATCAGATTGCTCTGAACTTGAAGTGATCTCTCCAGGTGTTATATCAAGCTTAGGGAGACTGGAAGAGTTGAGAATGAGAAACAGCTTTAGCAAGTGGGAGGTTGAAGGCGAAGGAAGTAATGCAAGCCTTTCAGAGTTGAAGCATTTGTCTCAGCTATACTCATTAGAAATACATATTTCTAATGCTGACATTCTTCCAGCAAACTTGTTCTCCCGCAAGTTGGAAAGATTCAATATAATTATTGGGGATGTGGGTGAGAAATATATGCTTGAGACGGCCCTCAACAGCCTAAAACTCAAGCTCACTACCAGCATTGAACAATTGGATGAAGGCCAAAAATTTCTGGTGGAAAGATCAGAAGACTTGTCCTTATATACGGAGAGTGTTAATAATATTTTCCATCCACTGGATATAAAAGAGTTTGAGCATCTGAAGCATTTGCAACTCCAAAGCAACGTTGTTGATTTTACTCATATTATAAATAGAAAGGTTGTGTTCCCCAATTTAACAACCTTGAGAGTACCTAGATGTGATGGCCTGAGCTTTTTGTTCTCATTTTCTATTCCTGAAAGTCTTGCAGAACTCCAAAGTCTTGCAGAACTCCAAAGTCTTGCAGAACTCAAGCATCTTGATATTTCCACATATGAAATTATGGAAGAGAGTCTATCATCAATAAGAGAATACACTGAAGAAAATATGGATAACATGTTTTCTAAGTGGTTAAATTTGAAGCTAAATGAATTGCCAGACATCATCAGACTTTGCTCAGGCAGTATAGACAAATTGGAAATAGAAGGTTGGATTAAAATGATGAGTGGTAAAAATACTAGAATCAGCAAAGAAATTGAAGAGAGTCACTCGGAAGAGAACCTTGATGTTAAGAGGGAGCTGATTACTGTAAAATACTTCCTCTTTGACCTAAAGGCTGTGTTCCCGAACTTAACATCATTGACAGTTCATAGGTGTGATCGACTAAGCTTCTTGTTTTCAATTTCTATGGCTAAAAGTCTTGTGGAACTCAAGCATCTTGAGATATCCACATGTGCAATCATAGAAGAGATTGTTTCATCAACAAGAGAACATGGTCAACAAAATATGGATAACTTGTTTCCTAAGTTGGAAGATTTGAAGCTAAATGAACTTCCAAACCTTACCAGATTTTGCTCCGGAAGTAATATTCAACTTCTGTCCTTAGAAAAATTGGATATAGAAGGTTGTAGTAAACTGGGTGCATTCATTTCTGATAATGTTGCTATGAGTGGTGAAGATATTGGAATCTGCATAGAAATTGAAGAGAAGGACTCCAAAGAGAACCTTGATGTTAACAGCAAGCTGAATACTGCACAATGCTTCCTCTTTGACGAAAAGATTGATTTGCCGAACTTGACAAGCTTGATAGTTCACCGATGTGATGGTTTAAGTTTCTTACTTAAAAAAGAAATGGAAAGAGTGGACACGAATGAGAACCTTGAGACAGTAGTACCAAACTTTCTTTTTGACAAAAAGGTAGGGCTACAAAGGTTGGAGAGCTTGACCATCAATGACCTACCTAAGCTCACAAAAATTTGGCACACCCAACTTGCTCCAAACTCTTTTTGCAGACTCAGAGACGTTACAGTACAACAATGCAATGGTCTTAAAAATATTTTTCAAGACTCCATCATAGCCGGTGTTTTTCAGCAGCTACAAAAGTTGGTAGTAAAGGAATGTGGAGTACTGGAGGAAATAGTTTCTCAGGAGGGGGGAGTAGAAAAGTTAATGCATGATCAGTTCTTCCCAGAACTAGCATGTTTGGAATTTACAAGTCTATTCCAACTTAAGAGATTCTATCTAAGGATGCCTGCTATCAACTGGCCACTAAAAACATTAGTGTTGTCTGATTGCCAGAAAGTGGATATCTTTGCCGCGGAATCTTTGGGCCTTCAGAAAACACATGACTTGGGGAATCTGCGTACTCGGGTTAAACAATATTTTGTTCTATTTGAGAAGAGTTTATTTCCCAAACTGGAAGATTTGACCTTCAGCCCCGTGGACATCTGGTACGGTCGACCTGCCCATGAGAAAGCTCTTTTTCCTGCCACCAGTACAGATGGGTACCTTCCACATTTGAGAACGTTGAGGCTACATGGAATGGAGAAGTTTATGCGTCTCTGGGAGAACACCGAACCTGCAGCTGGCTCAGCTTTTCCACAGTTGAGAACTCTTGAGGTGAAGTTTTCTGGATTGACTAATCTAGAGTTGTCTGGAATATCCTTCCGGAATCTAACAATTTTAGAAGTAACCTTTTGCTGGCGATTGCAATATTTGACCACTTATTCGGTAGCTCAAAGCCTCGTGCAACTCAAAACATTGAAAATTGATGAATGTAAAAATATGAAAGAAATCTTCACAAGCGAAGGGATGGGAGAAGATGCAGATCAAAGTGAGATTGTTTTCAGCCAGTTGCAACATTTGGAACTTAATGATTTAATAAGTTTGGAACGGTTTTGCTCGAGCGATTGCAGCGTGAAGGTCCCAACGTTGGGAACTTTAAAGGTGAATTGGTGCCCGCTCAAATTGAAGATTTCCTCTGATAATGTACTAGAAGTTGATCTGGATGTACAAAAGGCGCATTCTAGTAAAGAGGCTTTTGATACCACCGAGTCTGCTTGTAGCTCGGAAACAAATCAGAAACGGCCTGCCCCAAACGCCTCTGAAGGAGCTCAACATATCGAGTACAATGCACGAGAACTTCATGATGACAGCTTTATAACTGAGCTGAATAACAAAGGGACTCTATTGCCTGGCATTACTGGAAGTGAACATGGAGTTGAAGCTGTGATTCAAGAAACTCCTATCAATTCGCAAAACATAGGGCAAGTTGGAGCTGTGATTCAAGAAGCTCCTATCGATTCGCAAAACATAGGGCAAGCTGCAGCTGTGATTCAAGAAACTCCTATCGATTCGCAAAACATAGGGCAAGCTGCAGCTGTGATTCAAGAAACTCCTATCGATTCTCAAAACATAGGGCAAGCTGAAGCTGTGATTCAAGAAACTCCTATCGGTTCTCAAAACATAGGGCAAGCTGAAGCTGTGATTCAAGAAACTCAACACATAGGGCTAGTTGAAGCTGGGATTCAAGAAACTCCTATCGATTCTCAAAACATAGGGCAAGCTGAGATTATGGACCTAAAGCAGAAGCAAATTGTCACCAATACTCAGAAGAATCTGCAGGAGTCTGATTTTGGAGAAAGCCTCATTGAACCTTTGAATGCAAATGAAGGCAAACAGCTTCAATTGAAACAAGTTGATGGTGTCCAGACTGAATCATGGTCGCAAAGCATGTCTATGCTTGAACAGGATGACATCACAAGTTTGCGGAAAGAATTAAGGGCCAACGAAGGTAACAGCCTCCCGGAGAGCCCGGTTGCTCTCGCGCTGCCTGAGACTGGTCCTTCTAGCTCTTCCGGGGCGAAGGGCTCTTTGAAAGATAAGATCCGACTGTTGACTGCCAAGAGAACTGCTGATCTTCCTGTGGAGGTGATAGCCCGGCTTAATGCTCTGCTGGGAGTTAATCTGGCAAATCCCTCAGCCTACCAGCAACTCTCAGCACTCCTCCCAGTTCTTCAGTCAACCAGAATGGAGTGGGTAGTTGATCAAGTAAGAGAAGCTCTTCAGAAATTGGCTCCTGCCGCGGACAAGAAGAGCTCTTCTAACGACCTAGTGACTGAGCTAACTGCCCGACAAACCCAACTTGAGGCGAGAAAGTCTGAGCTTATTGCTGGCAGCTCTCAAGTTGAGGCGGAATGTCATCAAATGATGGGACAGGAGGCGGAACTCGCTGACATAAAACAACAGATCAAAACGCTTGAAGCTCGGGCCGCTGCTCTTGAGGCTGACATATCCTCTGGCAAACAGCGATACTCCACCTATGAATCCTCCATTGACCAACTGCTCAGAGACCGGGAGGAAAACCAAGCGTCGTTGGACTCCGCCAACCGAGATTTGCTTCAGGCCCAGGTTGAGGTTGATAGCACTTCCAACTTTATCAAGGCACATTTGCGCCAGCTTTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

3174

Amino Acids

357.14

Weight (kDa)

5.21

Isoelectric Point (pI)

43.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 155 - 315 1.5e-25 NB-ARC domain
LRR_14 PF23598 535 - 798 8.4e-10 Leucine-rich repeat region
LRR_RPS2 PF23247 853 - 926 1.2e-14 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 938 - 982 4.4e-10 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1086 - 1219 9.1e-08 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1222 - 1327 2.5e-09 Plant disease resistance protein RPS2-like, leucine-rich repeats
NB-ARC PF00931 1351 - 1511 1.8e-23 NB-ARC domain
LRR_14 PF23598 1710 - 2028 9.1e-10 Leucine-rich repeat region
LRR_RPS2 PF23247 2132 - 2241 9.5e-15 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 2279 - 2394 2.8e-14 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 2332 - 2436 2.2e-13 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 2568 - 2672 3.8e-11 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

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Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 564, 5948, 8219
AarI CACCTGC 1 cut(s) 4109
Acc36I ACCTGC 4 cut(s) 1683, 4109, 7528, 7645
Acc65I GGTACC 1 cut(s) 7563
AccB1I GGYRCC 2 cut(s) 7563, 8013
AccB7I CCANNNNNTGG 3 cut(s) 4030, 5875, 7360
AccBSI CCGCTC 1 cut(s) 8020
AccI GTMKAC 5 cut(s) 970, 1737, 3907, 4936, 7516
AccII CGCG 5 cut(s) 429, 3266, 7376, 8885, 9143
AccIII TCCGGA 2 cut(s) 6635, 7725
AclI AACGTT 3 cut(s) 5925, 7583, 7988
AcoI YGGCCR 4 cut(s) 1472, 3098, 5072, 7322
AcyI GRCGYC 1 cut(s) 1080
AdeI CACNNNGTG 1 cut(s) 1907
AflII CTTAAG 1 cut(s) 7286
AflIII ACRYGT 3 cut(s) 1432, 6174, 6509
AjiI CACGTC 2 cut(s) 1435, 3628
AjuI GAANNNNNNNTTGG 4 cut(s) 1800, 1832, 5275, 5307
AleI CACNNNNGTG 1 cut(s) 6876
Alw21I GWGCWC 4 cut(s) 1502, 5102, 8173, 9158
Alw44I GTGCAC 2 cut(s) 1498, 5098
AlwNI CAGNNNCTG 2 cut(s) 3590, 5308
Ama87I CYCGRG 5 cut(s) 120, 3154, 7425, 7960, 9324
Aor13HI TCCGGA 2 cut(s) 6635, 7725
ApaLI GTGCAC 2 cut(s) 1498, 5098
ArsI GACNNNNNNTTYG 6 cut(s) 168, 200, 4651, 4683, 7768, 7800
Asp700I GAANNNNTTC 3 cut(s) 645, 4236, 9120
Asp718I GGTACC 1 cut(s) 7563
AspA2I CCTAGG 1 cut(s) 5222
AspLEI GCGC 6 cut(s) 321, 1309, 3266, 8080, 8887, 9513
AsuC2I CCSGG 8 cut(s) 2477, 2891, 5162, 8864, 8873, 8917, 8998, 9413
AsuII TTCGAA 1 cut(s) 82
AvaI CYCGRG 5 cut(s) 120, 3154, 7425, 7960, 9324
AvaII GGWCC 7 cut(s) 2473, 3284, 3416, 3495, 7981, 8635, 8900
AvrII CCTAGG 1 cut(s) 5222
AxyI CCTNAGG 1 cut(s) 399
BaeGI GKGCMC 3 cut(s) 1502, 5102, 8018
BaeI ACNNNNGTAYC 2 cut(s) 6933, 6966
BalI TGGCCA 4 cut(s) 1474, 3100, 5074, 7324
BamHI GGATCC 2 cut(s) 3190, 4546
BanI GGYRCC 2 cut(s) 7563, 8013
BanII GRGCYC 4 cut(s) 8173, 8873, 8930, 9158
BauI CACGAG 3 cut(s) 4976, 7802, 8193
BbsI GAAGAC 7 cut(s) 1847, 2217, 2247, 2597, 2903, 4448, 5835
Bbv12I GWGCWC 4 cut(s) 1502, 5102, 8173, 9158
BbvCI CCTCAGC 2 cut(s) 2162, 9037
BceAI ACGGC 3 cut(s) 702, 5760, 8159
BcgI CGANNNNNNTGC 8 cut(s) 2003, 2037, 3569, 3603, 3717, 3751, 8171, 8205
BclI TGATCA 3 cut(s) 2812, 7234, 9103
BcnI CCSGG 8 cut(s) 2477, 2891, 5162, 8864, 8873, 8917, 8998, 9413
BfmI CTRYAG 5 cut(s) 573, 7638, 8382, 8433, 8678
BfoI RGCGCY 1 cut(s) 322
BfrI CTTAAG 1 cut(s) 7286
BfuAI ACCTGC 4 cut(s) 1683, 4109, 7528, 7645
BglI GCCNNNNNGGC 1 cut(s) 2900
BlnI CCTAGG 1 cut(s) 5222
BlpI GCTNAGC 3 cut(s) 322, 1778, 7648
BmcAI AGTACT 3 cut(s) 2519, 4627, 7185
Bme18I GGWCC 7 cut(s) 2473, 3284, 3416, 3495, 7981, 8635, 8900
BmeT110I CYCGRG 5 cut(s) 120, 3154, 7425, 7960, 9324
BmgBI CACGTC 2 cut(s) 1435, 3628
BmrI ACTGGG 2 cut(s) 6704, 9062
BmuI ACTGGG 2 cut(s) 6704, 9062
BoxI GACNNNNGTC 1 cut(s) 752
BpiI GAAGAC 7 cut(s) 1847, 2217, 2247, 2597, 2903, 4448, 5835
BplI GAGNNNNNCTC 6 cut(s) 6311, 6343, 6755, 6787, 8688, 8720
BpmI CTGGAG 2 cut(s) 5484, 7208
Bpu10I CCTNAGC 8 cut(s) 311, 2162, 4019, 5518, 6008, 6235, 7020, 9037
Bpu1102I GCTNAGC 3 cut(s) 322, 1778, 7648
Bpu14I TTCGAA 1 cut(s) 82
BpuMI CCSGG 8 cut(s) 2477, 2891, 5162, 8864, 8873, 8917, 8998, 9413
Bsa29I ATCGAT 4 cut(s) 8358, 8409, 8460, 8601
BsaBI GATNNNNATC 2 cut(s) 3831, 7884
BsaHI GRCGYC 1 cut(s) 1080
BsaI GGTCTC 1 cut(s) 9402
BsaWI WCCGGW 4 cut(s) 1410, 5001, 6635, 7725
Bse118I RCCGGY 1 cut(s) 7136
Bse21I CCTNAGG 1 cut(s) 399
Bse3DI GCAATG 4 cut(s) 1562, 4225, 4898, 7105
Bse8I GATNNNNATC 2 cut(s) 3831, 7884
BseAI TCCGGA 2 cut(s) 6635, 7725
BseCI ATCGAT 4 cut(s) 8358, 8409, 8460, 8601
BseJI GATNNNNATC 2 cut(s) 3831, 7884
BseMI GCAATG 4 cut(s) 1562, 4225, 4898, 7105
BseRI GAGGAG 9 cut(s) 387, 543, 2074, 3570, 3573, 3793, 3913, 4535, 9053
BseSI GKGCMC 3 cut(s) 1502, 5102, 8018
BseYI CCCAGC 2 cut(s) 8579, 9013
BsgI GTGCAG 3 cut(s) 1661, 1706, 6795
Bsh1236I CGCG 5 cut(s) 429, 3266, 7376, 8885, 9143
Bsh1285I CGRYCG 1 cut(s) 7516
BshNI GGYRCC 2 cut(s) 7563, 8013
BshVI ATCGAT 4 cut(s) 8358, 8409, 8460, 8601
BsiEI CGRYCG 1 cut(s) 7516
BsiHKAI GWGCWC 4 cut(s) 1502, 5102, 8173, 9158
BsiHKCI CYCGRG 5 cut(s) 120, 3154, 7425, 7960, 9324
BsiWI CGTACG 1 cut(s) 872
BslFI GGGAC 7 cut(s) 813, 1216, 2486, 3485, 7967, 8254, 9285
BsmBI CGTCTC 4 cut(s) 1081, 5735, 7071, 7622
BsmFI GGGAC 7 cut(s) 813, 1216, 2486, 3485, 7967, 8254, 9285
BsmI GAATGC 8 cut(s) 2429, 2713, 3087, 4977, 5009, 6701, 8080, 8725
Bso31I GGTCTC 1 cut(s) 9402
BsoBI CYCGRG 5 cut(s) 120, 3154, 7425, 7960, 9324
Bsp119I TTCGAA 1 cut(s) 82
Bsp1286I GDGCHC 7 cut(s) 1502, 5102, 8018, 8173, 8873, 8930, 9158
Bsp13I TCCGGA 2 cut(s) 6635, 7725
Bsp1407I TGTACA 1 cut(s) 8068
Bsp1720I GCTNAGC 3 cut(s) 322, 1778, 7648
BspDI ATCGAT 4 cut(s) 8358, 8409, 8460, 8601
BspEI TCCGGA 2 cut(s) 6635, 7725
BspFNI CGCG 5 cut(s) 429, 3266, 7376, 8885, 9143
BspHI TCATGA 2 cut(s) 2809, 8203
BspMAI CTGCAG 5 cut(s) 577, 7642, 8386, 8437, 8682
BspMI ACCTGC 4 cut(s) 1683, 4109, 7528, 7645
BspQI GCTCTTC 7 cut(s) 703, 1167, 4294, 8917, 9126, 9146, 9163
BspT104I TTCGAA 1 cut(s) 82
BspT107I GGYRCC 2 cut(s) 7563, 8013
BspTI CTTAAG 1 cut(s) 7286
BspTNI GGTCTC 1 cut(s) 9402
BsrBI CCGCTC 1 cut(s) 8020
BsrDI GCAATG 4 cut(s) 1562, 4225, 4898, 7105
BsrFI RCCGGY 1 cut(s) 7136
BsrGI TGTACA 1 cut(s) 8068
BssAI RCCGGY 1 cut(s) 7136
BssNAI GTATAC 1 cut(s) 971
BssNI GRCGYC 1 cut(s) 1080
BssSI CACGAG 3 cut(s) 4976, 7802, 8193
BssT1I CCWWGG 3 cut(s) 1550, 2905, 5222
Bst1107I GTATAC 1 cut(s) 971
Bst2BI CACGAG 3 cut(s) 4976, 7802, 8193
BstACI GRCGYC 1 cut(s) 1080
BstAFI CTTAAG 1 cut(s) 7286
BstAPI GCANNNNNTGC 1 cut(s) 1304
BstAUI TGTACA 1 cut(s) 8068
BstBI TTCGAA 1 cut(s) 82
BstDSI CCRYGG 4 cut(s) 4655, 7374, 7497, 9141
BstEII GGTNACC 2 cut(s) 5051, 5189
BstFNI CGCG 5 cut(s) 429, 3266, 7376, 8885, 9143
BstH2I RGCGCY 1 cut(s) 322
BstHHI GCGC 6 cut(s) 321, 1309, 3266, 8080, 8887, 9513
BstMCI CGRYCG 1 cut(s) 7516
BstNSI RCATGY 9 cut(s) 1684, 1729, 2608, 3551, 4677, 6178, 6513, 7260, 8794
BstPAI GACNNNNGTC 1 cut(s) 752
BstPI GGTNACC 2 cut(s) 5051, 5189
BstSFI CTRYAG 5 cut(s) 573, 7638, 8382, 8433, 8678
BstSLI GKGCMC 3 cut(s) 1502, 5102, 8018
BstUI CGCG 5 cut(s) 429, 3266, 7376, 8885, 9143
BstV2I GAAGAC 7 cut(s) 1847, 2217, 2247, 2597, 2903, 4448, 5835
BstX2I RGATCY 5 cut(s) 2774, 3190, 4044, 4546, 8943
BstYI RGATCY 5 cut(s) 2774, 3190, 4044, 4546, 8943
BstZ17I GTATAC 1 cut(s) 971
Bsu15I ATCGAT 4 cut(s) 8358, 8409, 8460, 8601
Bsu36I CCTNAGG 1 cut(s) 399
BsuTUI ATCGAT 4 cut(s) 8358, 8409, 8460, 8601
BtgI CCRYGG 4 cut(s) 4655, 7374, 7497, 9141
BtgZI GCGATG 3 cut(s) 4548, 5281, 5341
BtrI CACGTC 2 cut(s) 1435, 3628
BtsI GCAGTG 1 cut(s) 5155
BveI ACCTGC 4 cut(s) 1683, 4109, 7528, 7645
CaiI CAGNNNCTG 2 cut(s) 3590, 5308
CciI TCATGA 2 cut(s) 2809, 8203
CfoI GCGC 6 cut(s) 321, 1309, 3266, 8080, 8887, 9513
Cfr10I RCCGGY 1 cut(s) 7136
Cfr42I CCGCGG 2 cut(s) 7377, 9144
ClaI ATCGAT 4 cut(s) 8358, 8409, 8460, 8601
CseI GACGC 4 cut(s) 101, 1088, 7604, 9417
CsiI ACCWGGT 1 cut(s) 1903
DraI TTTAAA 4 cut(s) 1047, 1492, 4632, 8001
DraIII CACNNNGTG 1 cut(s) 1907
EaeI YGGCCR 4 cut(s) 1472, 3098, 5072, 7322
EciI GGCGGA 3 cut(s) 9266, 9296, 9430
Ecl136II GAGCTC 2 cut(s) 8171, 9156
Eco130I CCWWGG 3 cut(s) 1550, 2905, 5222
Eco24I GRGCYC 4 cut(s) 8173, 8873, 8930, 9158
Eco31I GGTCTC 1 cut(s) 9402
Eco32I GATATC 2 cut(s) 6504, 7366
Eco47I GGWCC 7 cut(s) 2473, 3284, 3416, 3495, 7981, 8635, 8900
Eco53kI GAGCTC 2 cut(s) 8171, 9156
Eco81I CCTNAGG 1 cut(s) 399
Eco88I CYCGRG 5 cut(s) 120, 3154, 7425, 7960, 9324
Eco91I GGTNACC 2 cut(s) 5051, 5189
EcoICRI GAGCTC 2 cut(s) 8171, 9156
EcoO109I RGGNCCY 3 cut(s) 2473, 3416, 7981
EcoO65I GGTNACC 2 cut(s) 5051, 5189
EcoRI GAATTC 3 cut(s) 490, 1484, 3974
EcoRV GATATC 2 cut(s) 6504, 7366
EcoT14I CCWWGG 3 cut(s) 1550, 2905, 5222
EcoT22I ATGCAT 4 cut(s) 1386, 3087, 3549, 7233
EcoT38I GRGCYC 4 cut(s) 8173, 8873, 8930, 9158
ErhI CCWWGG 3 cut(s) 1550, 2905, 5222
Esp3I CGTCTC 4 cut(s) 1081, 5735, 7071, 7622
FaqI GGGAC 7 cut(s) 813, 1216, 2486, 3485, 7967, 8254, 9285
FauI CCCGC 5 cut(s) 434, 1193, 4797, 5690, 8025
FauNDI CATATG 1 cut(s) 6112
FbaI TGATCA 3 cut(s) 2812, 7234, 9103
FblI GTMKAC 5 cut(s) 970, 1737, 3907, 4936, 7516
FriOI GRGCYC 4 cut(s) 8173, 8873, 8930, 9158
GlaI GCGC 6 cut(s) 320, 1308, 3265, 8079, 8886, 9512
GsaI CCCAGC 2 cut(s) 8583, 9017
GsuI CTGGAG 2 cut(s) 5484, 7208
HaeII RGCGCY 1 cut(s) 322
HgaI GACGC 4 cut(s) 101, 1088, 7604, 9417
HhaI GCGC 6 cut(s) 321, 1309, 3266, 8080, 8887, 9513
Hin1I GRCGYC 1 cut(s) 1080
Hin6I GCGC 6 cut(s) 319, 1307, 3264, 8078, 8885, 9511
HinP1I GCGC 6 cut(s) 319, 1307, 3264, 8078, 8885, 9511
HincII GTYRAC 6 cut(s) 834, 6557, 6793, 7517, 8955, 9081
HindII GTYRAC 6 cut(s) 834, 6557, 6793, 7517, 8955, 9081
HindIII AAGCTT 6 cut(s) 1918, 3357, 3748, 5515, 6445, 6859
HpaI GTTAAC 1 cut(s) 6793
Hpy99I CGWCG 1 cut(s) 9433
HpyCH4IV ACGT 9 cut(s) 897, 1121, 1434, 3627, 3880, 5925, 7080, 7583, 7988
HpySE526I ACGT 9 cut(s) 897, 1121, 1434, 3627, 3880, 5925, 7080, 7583, 7988
Hsp92I GRCGYC 1 cut(s) 1080
HspAI GCGC 6 cut(s) 319, 1307, 3264, 8078, 8885, 9511
KflI GGGWCCC 1 cut(s) 2473
Kpn2I TCCGGA 2 cut(s) 6635, 7725
KpnI GGTACC 1 cut(s) 7567
Ksp22I TGATCA 3 cut(s) 2812, 7234, 9103
KspAI GTTAAC 1 cut(s) 6793
KspI CCGCGG 2 cut(s) 7377, 9144
LguI GCTCTTC 7 cut(s) 703, 1167, 4294, 8917, 9126, 9146, 9163
MabI ACCWGGT 1 cut(s) 1903
MaeII ACGT 9 cut(s) 897, 1121, 1434, 3627, 3880, 5925, 7080, 7583, 7988
MbiI CCGCTC 1 cut(s) 8020
MfeI CAATTG 8 cut(s) 18, 1823, 2201, 3257, 5420, 5441, 5789, 8744
MflI RGATCY 5 cut(s) 2774, 3190, 4044, 4546, 8943
MhlI GDGCHC 7 cut(s) 1502, 5102, 8018, 8173, 8873, 8930, 9158
MlsI TGGCCA 4 cut(s) 1474, 3100, 5074, 7324
MluNI TGGCCA 4 cut(s) 1474, 3100, 5074, 7324
Mox20I TGGCCA 4 cut(s) 1474, 3100, 5074, 7324
Mph1103I ATGCAT 4 cut(s) 1386, 3087, 3549, 7233
MroI TCCGGA 2 cut(s) 6635, 7725
MroXI GAANNNNTTC 3 cut(s) 645, 4236, 9120
MscI TGGCCA 4 cut(s) 1474, 3100, 5074, 7324
MslI CAYNNNNRTG 4 cut(s) 5105, 6432, 6876, 8795
Msp20I TGGCCA 4 cut(s) 1474, 3100, 5074, 7324
MspA1I CMGCKG 8 cut(s) 2929, 3587, 7376, 7643, 8387, 8438, 9143, 9332
MspCI CTTAAG 1 cut(s) 7286
MunI CAATTG 8 cut(s) 18, 1823, 2201, 3257, 5420, 5441, 5789, 8744
Mva1269I GAATGC 8 cut(s) 2429, 2713, 3087, 4977, 5009, 6701, 8080, 8725
MvnI CGCG 5 cut(s) 429, 3266, 7376, 8885, 9143
NciI CCSGG 8 cut(s) 2477, 2891, 5162, 8864, 8873, 8917, 8998, 9413
NdeI CATATG 1 cut(s) 6112
NmeAIII GCCGAG 2 cut(s) 73, 2002
NmuCI GTSAC 9 cut(s) 334, 1027, 1686, 3028, 4612, 5189, 6323, 8656, 9172
NsiI ATGCAT 4 cut(s) 1386, 3087, 3549, 7233
NspI RCATGY 9 cut(s) 1684, 1729, 2608, 3551, 4677, 6178, 6513, 7260, 8794
NspV TTCGAA 1 cut(s) 82
OliI CACNNNNGTG 1 cut(s) 6876
PaeR7I CTCGAG 1 cut(s) 7960
PagI TCATGA 2 cut(s) 2809, 8203
PaqCI CACCTGC 1 cut(s) 4109
PciI ACATGT 2 cut(s) 6174, 6509
PciSI GCTCTTC 7 cut(s) 703, 1167, 4294, 8917, 9126, 9146, 9163
PctI GAATGC 8 cut(s) 2429, 2713, 3087, 4977, 5009, 6701, 8080, 8725
PdmI GAANNNNTTC 3 cut(s) 645, 4236, 9120
Pfl23II CGTACG 1 cut(s) 872
PflMI CCANNNNNTGG 3 cut(s) 4030, 5875, 7360
PfoI TCCNGGA 3 cut(s) 2087, 3076, 8862
PpuMI RGGWCCY 3 cut(s) 2473, 3416, 7981
PscI ACATGT 2 cut(s) 6174, 6509
PshAI GACNNNNGTC 1 cut(s) 752
PsiI TTATAA 3 cut(s) 564, 5948, 8219
Psp124BI GAGCTC 2 cut(s) 8173, 9158
Psp1406I AACGTT 3 cut(s) 5925, 7583, 7988
Psp5II RGGWCCY 3 cut(s) 2473, 3416, 7981
PspEI GGTNACC 2 cut(s) 5051, 5189
PspFI CCCAGC 2 cut(s) 8579, 9013
PspLI CGTACG 1 cut(s) 872
PspPPI RGGWCCY 3 cut(s) 2473, 3416, 7981
PspXI VCTCGAGB 1 cut(s) 7960
PstI CTGCAG 5 cut(s) 577, 7642, 8386, 8437, 8682
PstNI CAGNNNCTG 2 cut(s) 3590, 5308
PsuI RGATCY 5 cut(s) 2774, 3190, 4044, 4546, 8943
PvuII CAGCTG 5 cut(s) 2929, 3587, 7643, 8387, 8438
RseI CAYNNNNRTG 4 cut(s) 5105, 6432, 6876, 8795
SacI GAGCTC 2 cut(s) 8173, 9158
SacII CCGCGG 2 cut(s) 7377, 9144
SalI GTCGAC 1 cut(s) 7515
SapI GCTCTTC 7 cut(s) 703, 1167, 4294, 8917, 9126, 9146, 9163
ScaI AGTACT 3 cut(s) 2519, 4627, 7185
SduI GDGCHC 7 cut(s) 1502, 5102, 8018, 8173, 8873, 8930, 9158
SexAI ACCWGGT 1 cut(s) 1903
SfcI CTRYAG 5 cut(s) 573, 7638, 8382, 8433, 8678
SfiI GGCCNNNNNGGCC 1 cut(s) 2900
Sfr274I CTCGAG 1 cut(s) 7960
Sfr303I CCGCGG 2 cut(s) 7377, 9144
SfuI TTCGAA 1 cut(s) 82
SgrBI CCGCGG 2 cut(s) 7377, 9144
SinI GGWCC 7 cut(s) 2473, 3284, 3416, 3495, 7981, 8635, 8900
SlaI CTCGAG 1 cut(s) 7960
SmiMI CAYNNNNRTG 4 cut(s) 5105, 6432, 6876, 8795
SspI AATATT 8 cut(s) 1250, 2272, 3722, 5863, 6646, 7114, 7439, 7772
SstI GAGCTC 2 cut(s) 8173, 9158
StyI CCWWGG 3 cut(s) 1550, 2905, 5222
TaiI ACGT 9 cut(s) 900, 1124, 1437, 3630, 3883, 5928, 7083, 7586, 7991
TauI GCSGC 4 cut(s) 104, 7376, 9143, 9332
TseFI GTSAC 9 cut(s) 334, 1027, 1686, 3028, 4612, 5189, 6323, 8656, 9172
Tsp45I GTSAC 9 cut(s) 334, 1027, 1686, 3028, 4612, 5189, 6323, 8656, 9172
TspGWI ACGGA 9 cut(s) 290, 353, 1128, 2547, 3543, 4644, 4906, 4924, 5861
Van91I CCANNNNNTGG 3 cut(s) 4030, 5875, 7360
Vha464I CTTAAG 1 cut(s) 7286
VneI GTGCAC 2 cut(s) 1498, 5098
VpaK11BI GGWCC 7 cut(s) 2473, 3284, 3416, 3495, 7981, 8635, 8900
XbaI TCTAGA 5 cut(s) 88, 4430, 4732, 5089, 7702
XceI RCATGY 9 cut(s) 1684, 1729, 2608, 3551, 4677, 6178, 6513, 7260, 8794
XhoI CTCGAG 1 cut(s) 7960
XmaJI CCTAGG 1 cut(s) 5222
XmiI GTMKAC 5 cut(s) 970, 1737, 3907, 4936, 7516
XmnI GAANNNNTTC 3 cut(s) 645, 4236, 9120
ZrmI AGTACT 3 cut(s) 2519, 4627, 7185
Zsp2I ATGCAT 4 cut(s) 1386, 3087, 3549, 7233
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.