Rmu_sc0015959.1_g000003

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0015959.1
OG0000042
Physical Location & Seq
Reverse (-)
10706 .. 12714
2009 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0015959.1_g000003.1.cds

Sequence Viewer

Length: 1593 bp
atgcaggtaggatttcctagcttggagatattgagcatcgatggggtaagggagttgaaggcaatatggcatgtccaacttgctcgagactcttttcggagaatcaagcaagtagatgtccaggaatgcacaaatctagtaagtttgtttccgcctagtgtcattggaagattgaatgccctggaaaccttgaatatatggggctgcggatcactagaagtgatatttgatgaattaccgggaagaagtaatgttaaagaaatacatgtcgacacatcattccctcatgaccaattgaaacgttttgattgtcaaaatcttgattcaataaacatctaccagtgtcatagtttgaaacagattttcccagcctcagtggccagaggtcttcaaaaccttactcggttggatgtgaacgaatgtgatgcagttaaggaaattgttggtgaggaagagggaaaaggtctagaaacaatacctcctcattttgttttctcaaaagtaacatcggtggagttgaaggatctgcctcaacttacgagtttttatcccaaaacacatgcttcccagtggccagtacttgtacaattggaagtgaagaaatgtgataaagtgggaatatttgccgcagaattttcagtctctaaaaagaaacatgagatgaatcatctaatgtcaacaccacctttattttcaatcagcgaggattcgttcctcgacttggaagacttggaattgaatgacatggaaatttggaatggaccaccgccagcaaatccgatggtgtttggcaaattaaaatcaattacctttcgtgggagttgtgcacctttctccaagcaagcttcggtcattttcctccagagattacaaaatcttgaaaaaattgaaatggacaattgttcttgggaagcagtatttgtcaatcaaggaattagtactggggaagaaaaacatgatgatggagttaggagtgggggcctcccgcgtgtaaggattttgagcctcgagagtatggacgaactgttgcatctagggaatgacaactcccaatcactgctttttccaaatttggaaactcttaaggtgtcgtggtgtaccatattaaagagtctggagtcatatgcaatattcttccgaaatctaacaactttgagaatatatgcttgtgatggattggaatatttaacaagttattcggtggctaaaagcttagtgcaactcacgacgttggaagtggaccagtgtgatagaattgtagtaattgtctcaagcaacggagatgatgatgctgatgcagcaggaaatgagatcgctttcagccgcttgcagcatttgaagcttacttgtctaccaagtctacaagatttttgctcctggaattgcacactcaaattcccatccttcatgaccttacaagtagaagactgcccgatcaagttgaagatttcccctgaaggagtcctcatgaccgagatagaccatcaatttcagcaaaacagagtcgattatgatagtgatgatgatgaggagggggatgttgaaacggctaaaaaaaatactgaaatattatcagaagggcctgcgagctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

530

Amino Acids

59.59

Weight (kDa)

4.82

Isoelectric Point (pI)

47.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 3 cut(s) 270, 1351, 1360
AccII CGCG 1 cut(s) 988
AciI CCGC 6 cut(s) 152, 207, 627, 767, 986, 1324
AclI AACGTT 1 cut(s) 301
AclWI GGATC 2 cut(s) 217, 531
AcoI YGGCCR 2 cut(s) 378, 572
AcsI RAATTY 4 cut(s) 632, 750, 1069, 1394
AcuI CTGAAG 1 cut(s) 1476
AfaI GTAC 4 cut(s) 579, 585, 940, 1099
AfiI CCNNNNNNNGG 2 cut(s) 721, 816
AflII CTTAAG 1 cut(s) 1082
AflIII ACRYGT 1 cut(s) 265
AjnI CCWGG 3 cut(s) 120, 180, 1376
AluBI AGCT 5 cut(s) 21, 845, 1212, 1342, 1590
AluI AGCT 5 cut(s) 21, 845, 1212, 1342, 1590
Alw21I GWGCWC 1 cut(s) 829
Alw26I GTCTC 3 cut(s) 81, 646, 1273
Alw44I GTGCAC 1 cut(s) 825
AlwI GGATC 2 cut(s) 217, 531
Ama87I CYCGRG 2 cut(s) 84, 1007
AoxI GGCC 4 cut(s) 378, 572, 979, 1580
ApaLI GTGCAC 1 cut(s) 825
ApeKI GCWGC 3 cut(s) 204, 1298, 1330
ApoI RAATTY 4 cut(s) 632, 750, 1069, 1394
AspS9I GGNCC 4 cut(s) 761, 979, 1240, 1580
AsuC2I CCSGG 1 cut(s) 240
AsuHPI GGTGA 1 cut(s) 458
AvaI CYCGRG 2 cut(s) 84, 1007
AvaII GGWCC 2 cut(s) 761, 1240
BaeGI GKGCMC 1 cut(s) 829
BalI TGGCCA 2 cut(s) 380, 574
BbsI GAAGAC 3 cut(s) 380, 732, 1431
Bbv12I GWGCWC 1 cut(s) 829
BbvI GCAGC 3 cut(s) 191, 1310, 1342
BccI CCATC 6 cut(s) 35, 775, 956, 1166, 1408, 1491
BceAI ACGGC 1 cut(s) 1563
BcgI CGANNNNNNTGC 2 cut(s) 407, 441
BciT130I CCWGG 3 cut(s) 122, 182, 1378
BcnI CCSGG 1 cut(s) 240
BcoDI GTCTC 3 cut(s) 81, 646, 1273
BfaI CTAG 7 cut(s) 18, 137, 156, 215, 467, 1034, 1591
BfrI CTTAAG 1 cut(s) 1082
BglI GCCNNNNNGGC 1 cut(s) 377
BisI GCNGC 5 cut(s) 205, 627, 1299, 1324, 1331
BlsI GCNGC 5 cut(s) 206, 628, 1300, 1325, 1332
BmcAI AGTACT 2 cut(s) 579, 940
Bme1390I CCNGG 4 cut(s) 122, 182, 240, 1378
Bme18I GGWCC 2 cut(s) 761, 1240
BmeT110I CYCGRG 2 cut(s) 84, 1007
BmgT120I GGNCC 4 cut(s) 761, 979, 1240, 1580
BmiI GGNNCC 1 cut(s) 980
BmrFI CCNGG 4 cut(s) 122, 182, 240, 1378
BmrI ACTGGG 2 cut(s) 562, 951
BmsI GCATC 5 cut(s) 45, 415, 1039, 1279, 1285
BmuI ACTGGG 2 cut(s) 562, 951
BpiI GAAGAC 3 cut(s) 380, 732, 1431
BpmI CTGGAG 2 cut(s) 845, 1136
BpuEI CTTGAG 1 cut(s) 1255
BpuMI CCSGG 1 cut(s) 240
Bsa29I ATCGAT 1 cut(s) 39
BsaJI CCNNGG 1 cut(s) 180
BsaXI ACNNNNNCTCC 2 cut(s) 463, 493
Bsc4I CCNNNNNNNGG 2 cut(s) 721, 816
Bse1I ACTGG 5 cut(s) 340, 568, 575, 946, 1243
BseBI CCWGG 3 cut(s) 122, 182, 1378
BseCI ATCGAT 1 cut(s) 39
BseDI CCNNGG 1 cut(s) 180
BseGI GGATG 3 cut(s) 415, 1400, 1543
BseLI CCNNNNNNNGG 2 cut(s) 721, 816
BseMII CTCAG 1 cut(s) 387
BseNI ACTGG 5 cut(s) 340, 568, 575, 946, 1243
BseRI GAGGAG 2 cut(s) 471, 1544
BseSI GKGCMC 1 cut(s) 829
BseXI GCAGC 3 cut(s) 191, 1310, 1342
BseYI CCCAGC 1 cut(s) 367
Bsh1236I CGCG 1 cut(s) 988
BshFI GGCC 4 cut(s) 380, 574, 981, 1582
BshVI ATCGAT 1 cut(s) 39
BsiHKAI GWGCWC 1 cut(s) 829
BsiHKCI CYCGRG 2 cut(s) 84, 1007
BsiSI CCGG 1 cut(s) 239
BslI CCNNNNNNNGG 2 cut(s) 721, 816
BsmAI GTCTC 3 cut(s) 81, 646, 1273
BsmI GAATGC 2 cut(s) 131, 181
BsnI GGCC 4 cut(s) 380, 574, 981, 1582
BsoBI CYCGRG 2 cut(s) 84, 1007
Bsp1286I GDGCHC 1 cut(s) 829
Bsp1407I TGTACA 1 cut(s) 583
Bsp143I GATC 4 cut(s) 209, 523, 1311, 1434
BspACI CCGC 6 cut(s) 152, 207, 627, 767, 986, 1324
BspANI GGCC 4 cut(s) 380, 574, 981, 1582
BspCNI CTCAG 1 cut(s) 386
BspDI ATCGAT 1 cut(s) 39
BspFNI CGCG 1 cut(s) 988
BspHI TCATGA 3 cut(s) 286, 1407, 1467
BspLI GGNNCC 1 cut(s) 980
BspPI GGATC 2 cut(s) 217, 531
BspTI CTTAAG 1 cut(s) 1082
BsrGI TGTACA 1 cut(s) 583
BsrI ACTGG 5 cut(s) 340, 568, 575, 946, 1243
BssECI CCNNGG 1 cut(s) 180
BssMI GATC 4 cut(s) 209, 523, 1311, 1434
Bst2UI CCWGG 3 cut(s) 122, 182, 1378
Bst4CI ACNGT 1 cut(s) 1026
Bst6I CTCTTC 1 cut(s) 447
BstAFI CTTAAG 1 cut(s) 1082
BstAUI TGTACA 1 cut(s) 583
BstC8I GCNNGC 5 cut(s) 771, 843, 1328, 1584, 1588
BstDEI CTNAG 2 cut(s) 373, 1213
BstF5I GGATG 3 cut(s) 415, 1400, 1543
BstFNI CGCG 1 cut(s) 988
BstKTI GATC 4 cut(s) 212, 526, 1314, 1437
BstMAI GTCTC 3 cut(s) 81, 646, 1273
BstMBI GATC 4 cut(s) 209, 523, 1311, 1434
BstMWI GCNNNNNNNGC 3 cut(s) 377, 1298, 1339
BstNI CCWGG 3 cut(s) 122, 182, 1378
BstNSI RCATGY 3 cut(s) 74, 269, 563
BstSCI CCNGG 4 cut(s) 120, 180, 238, 1376
BstSLI GKGCMC 1 cut(s) 829
BstUI CGCG 1 cut(s) 988
BstV1I GCAGC 3 cut(s) 191, 1310, 1342
BstV2I GAAGAC 3 cut(s) 380, 732, 1431
BstX2I RGATCY 1 cut(s) 523
BstYI RGATCY 1 cut(s) 523
Bsu15I ATCGAT 1 cut(s) 39
BsuRI GGCC 4 cut(s) 380, 574, 981, 1582
BsuTUI ATCGAT 1 cut(s) 39
BtsCI GGATG 3 cut(s) 415, 1400, 1543
BtsI GCAGTG 1 cut(s) 1055
BtsIMutI CAGTG 5 cut(s) 347, 381, 575, 1055, 1250
Cac8I GCNNGC 5 cut(s) 771, 843, 1328, 1584, 1588
CciI TCATGA 3 cut(s) 286, 1407, 1467
Cfr13I GGNCC 4 cut(s) 761, 979, 1240, 1580
ClaI ATCGAT 1 cut(s) 39
Csp6I GTAC 4 cut(s) 578, 584, 939, 1098
CviAII CATG 9 cut(s) 71, 266, 287, 560, 656, 745, 956, 1408, 1468
CviQI GTAC 4 cut(s) 578, 584, 939, 1098
DdeI CTNAG 2 cut(s) 373, 1213
DpnI GATC 4 cut(s) 211, 525, 1313, 1436
DpnII GATC 4 cut(s) 209, 523, 1311, 1434
EaeI YGGCCR 2 cut(s) 378, 572
Eam1104I CTCTTC 1 cut(s) 447
EarI CTCTTC 1 cut(s) 447
EciI GGCGGA 1 cut(s) 141
Eco47I GGWCC 2 cut(s) 761, 1240
Eco57I CTGAAG 1 cut(s) 1476
Eco88I CYCGRG 2 cut(s) 84, 1007
EcoO109I RGGNCCY 2 cut(s) 979, 1580
EcoRII CCWGG 3 cut(s) 120, 180, 1376
FaeI CATG 9 cut(s) 74, 269, 290, 563, 659, 748, 959, 1411, 1471
FatI CATG 9 cut(s) 70, 265, 286, 559, 655, 744, 955, 1407, 1467
FauI CCCGC 1 cut(s) 993
FauNDI CATATG 1 cut(s) 1123
FblI GTMKAC 3 cut(s) 270, 1351, 1360
Fnu4HI GCNGC 5 cut(s) 205, 627, 1299, 1324, 1331
FokI GGATG 3 cut(s) 422, 1387, 1550
Fsp4HI GCNGC 5 cut(s) 205, 627, 1299, 1324, 1331
FspBI CTAG 7 cut(s) 18, 137, 156, 215, 467, 1034, 1591
GluI GCNGC 5 cut(s) 205, 627, 1299, 1324, 1331
GsaI CCCAGC 1 cut(s) 371
GsuI CTGGAG 2 cut(s) 845, 1136
HaeIII GGCC 4 cut(s) 380, 574, 981, 1582
HapII CCGG 1 cut(s) 239
Hin1II CATG 9 cut(s) 74, 269, 290, 563, 659, 748, 959, 1411, 1471
HincII GTYRAC 2 cut(s) 271, 678
HindII GTYRAC 2 cut(s) 271, 678
HindIII AAGCTT 3 cut(s) 843, 1210, 1340
HinfI GANTC 9 cut(s) 89, 102, 323, 664, 707, 1111, 1118, 1461, 1503
HpaII CCGG 1 cut(s) 239
HphI GGTGA 1 cut(s) 458
Hpy166II GTNNAC 8 cut(s) 271, 415, 678, 827, 1098, 1240, 1352, 1361
Hpy188I TCNGA 4 cut(s) 99, 780, 1139, 1576
Hpy8I GTNNAC 8 cut(s) 271, 415, 678, 827, 1098, 1240, 1352, 1361
Hpy99I CGWCG 1 cut(s) 1231
HpyAV CCTTC 5 cut(s) 52, 514, 1414, 1451, 1571
HpyCH4III ACNGT 1 cut(s) 1026
HpyCH4IV ACGT 2 cut(s) 301, 1229
HpyF10VI GCNNNNNNNGC 3 cut(s) 377, 1298, 1339
HpyF3I CTNAG 2 cut(s) 373, 1213
HpySE526I ACGT 2 cut(s) 301, 1229
Hsp92II CATG 9 cut(s) 74, 269, 290, 563, 659, 748, 959, 1411, 1471
Kzo9I GATC 4 cut(s) 209, 523, 1311, 1434
LmnI GCTCC 1 cut(s) 1379
Lsp1109I GCAGC 3 cut(s) 191, 1310, 1342
LweI GCATC 5 cut(s) 45, 415, 1039, 1279, 1285
MaeI CTAG 7 cut(s) 18, 137, 156, 215, 467, 1034, 1591
MaeII ACGT 2 cut(s) 301, 1229
MaeIII GTNAC 1 cut(s) 502
MalI GATC 4 cut(s) 211, 525, 1313, 1436
MboI GATC 4 cut(s) 209, 523, 1311, 1434
MfeI CAATTG 3 cut(s) 293, 587, 898
MflI RGATCY 1 cut(s) 523
MhlI GDGCHC 1 cut(s) 829
MlsI TGGCCA 2 cut(s) 380, 574
MluNI TGGCCA 2 cut(s) 380, 574
MlyI GAGTC 5 cut(s) 83, 1120, 1127, 1470, 1512
MmeI TCCRAC 3 cut(s) 100, 387, 1212
Mox20I TGGCCA 2 cut(s) 380, 574
MscI TGGCCA 2 cut(s) 380, 574
MseI TTAA 6 cut(s) 255, 432, 797, 1083, 1106, 1187
MslI CAYNNNNRTG 1 cut(s) 960
Msp20I TGGCCA 2 cut(s) 380, 574
MspCI CTTAAG 1 cut(s) 1082
MspI CCGG 1 cut(s) 239
MspR9I CCNGG 4 cut(s) 122, 182, 240, 1378
MunI CAATTG 3 cut(s) 293, 587, 898
Mva1269I GAATGC 2 cut(s) 131, 181
MvaI CCWGG 3 cut(s) 122, 182, 1378
MvnI CGCG 1 cut(s) 988
MwoI GCNNNNNNNGC 3 cut(s) 377, 1298, 1339
NciI CCSGG 1 cut(s) 240
NdeI CATATG 1 cut(s) 1123
NdeII GATC 4 cut(s) 209, 523, 1311, 1434
NlaIII CATG 9 cut(s) 74, 269, 290, 563, 659, 748, 959, 1411, 1471
NlaIV GGNNCC 1 cut(s) 980
NspI RCATGY 3 cut(s) 74, 269, 563
PaeR7I CTCGAG 2 cut(s) 84, 1007
PagI TCATGA 3 cut(s) 286, 1407, 1467
PciI ACATGT 1 cut(s) 265
PctI GAATGC 2 cut(s) 131, 181
PfeI GAWTC 4 cut(s) 102, 323, 664, 707
PfoI TCCNGGA 2 cut(s) 120, 1376
PkrI GCNGC 5 cut(s) 206, 628, 1300, 1325, 1332
PleI GAGTC 5 cut(s) 83, 1119, 1126, 1469, 1511
PpsI GAGTC 5 cut(s) 83, 1119, 1126, 1469, 1511
PscI ACATGT 1 cut(s) 265
Psp1406I AACGTT 1 cut(s) 301
Psp6I CCWGG 3 cut(s) 120, 180, 1376
PspFI CCCAGC 1 cut(s) 367
PspGI CCWGG 3 cut(s) 120, 180, 1376
PspN4I GGNNCC 1 cut(s) 980
PspPI GGNCC 4 cut(s) 761, 979, 1240, 1580
PsuI RGATCY 1 cut(s) 523
RsaI GTAC 4 cut(s) 579, 585, 940, 1099
RsaNI GTAC 4 cut(s) 578, 584, 939, 1098
RseI CAYNNNNRTG 1 cut(s) 960
SalI GTCGAC 1 cut(s) 269
SaqAI TTAA 6 cut(s) 255, 432, 797, 1083, 1106, 1187
SatI GCNGC 5 cut(s) 205, 627, 1299, 1324, 1331
Sau3AI GATC 4 cut(s) 209, 523, 1311, 1434
Sau96I GGNCC 4 cut(s) 761, 979, 1240, 1580
ScaI AGTACT 2 cut(s) 579, 940
SchI GAGTC 5 cut(s) 83, 1120, 1127, 1470, 1512
ScrFI CCNGG 4 cut(s) 122, 182, 240, 1378
SduI GDGCHC 1 cut(s) 829
SfaNI GCATC 5 cut(s) 45, 415, 1039, 1279, 1285
Sfr274I CTCGAG 2 cut(s) 84, 1007
SinI GGWCC 2 cut(s) 761, 1240
SlaI CTCGAG 2 cut(s) 84, 1007
SmiMI CAYNNNNRTG 1 cut(s) 960
SmlI CTYRAG 4 cut(s) 84, 1007, 1082, 1270
SmoI CTYRAG 4 cut(s) 84, 1007, 1082, 1270
SsiI CCGC 6 cut(s) 152, 207, 627, 767, 986, 1324
SspI AATATT 4 cut(s) 621, 1131, 1184, 1569
SspMI CTAG 7 cut(s) 18, 137, 156, 215, 467, 1034, 1591
StyD4I CCNGG 4 cut(s) 120, 180, 238, 1376
TaaI ACNGT 1 cut(s) 1026
TaiI ACGT 2 cut(s) 304, 1232
TaqI TCGA 6 cut(s) 39, 85, 270, 717, 1008, 1506
TaqII GACCGA 2 cut(s) 838, 1487
TatI WGTACW 3 cut(s) 577, 583, 938
TauI GCSGC 2 cut(s) 629, 1326
TfiI GAWTC 4 cut(s) 102, 323, 664, 707
Tru1I TTAA 6 cut(s) 255, 432, 797, 1083, 1106, 1187
Tru9I TTAA 6 cut(s) 255, 432, 797, 1083, 1106, 1187
TscAI CASTG 5 cut(s) 347, 381, 575, 1062, 1250
TseI GCWGC 3 cut(s) 204, 1298, 1330
TspDTI ATGAA 3 cut(s) 246, 677, 1396
TspGWI ACGGA 1 cut(s) 1293
TspRI CASTG 5 cut(s) 347, 381, 575, 1062, 1250
Vha464I CTTAAG 1 cut(s) 1082
VneI GTGCAC 1 cut(s) 825
VpaK11BI GGWCC 2 cut(s) 761, 1240
XapI RAATTY 4 cut(s) 632, 750, 1069, 1394
XbaI TCTAGA 1 cut(s) 466
XceI RCATGY 3 cut(s) 74, 269, 563
XhoI CTCGAG 2 cut(s) 84, 1007
XmiI GTMKAC 3 cut(s) 270, 1351, 1360
XspI CTAG 7 cut(s) 18, 137, 156, 215, 467, 1034, 1591
ZrmI AGTACT 2 cut(s) 579, 940
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.