Rh2BG006700

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Forward (+)
484619 .. 489569
4951 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG006700.1

Sequence Viewer

Length: 1881 bp
ATGGATTTTCTCTCTGCAATTGGTAGTGCCATTGTTGGACCAATTGTCAGGTACACGGTTCAACCTGTTGCACGTCAAGTGGGTTATGTTATTCACTTCAAAAGAAACCTTCAAAAACTGGAGGCTCGAGTGGAAGAATTGAGAGCTGCTAGAGAGGGGAAAAACATTGAGGTTGCTGAAACTCAAAGAAGAGGTGAACGAATCCACCCAGATGTCCAGTTGTGGCTGACAAAAGTGGAGGAGATCACTGCAAAGACTGACCAATTCCTGAAAGATGAATGCAGCCAAGAAAATCTGAAATGCCTGCATGGGTTTTGCCCTAACCTGACCATGCGTCATCGGCTGAGCAGGAATTCTACAAAGCTGTTGCAGGAGGTTGTTGAACTACATGAAAGAAGAAGGCAACTTCCCATAGTCTCATGCGGTGTCCTCCGCGAAGAGGTGTGCATCATATCTACTGGAGATTACCAGTCCTTTGAATCAAGGAGGCCAACTTTCAAGGAAATCATGGATGAACTGAAGAATCCTAATACCATCAGGATCGGGGTGTACGGAATTGGAGGCGTGGGTAAAACCACACTTGTCAAAGAAGTGTATAGGCAAGCTAAACAAGATCAGACCAAGTTATTTGATGATGTGGTTTTAGTCCTCGATGTGAAAAAGAATTTAAACCCGGAAGATCTTCAGAAGAAAATTGTTGAAAAATTGGACATGAAGATTAGTCAAAGTGATGATGAGACTATAGACGGAAGGGCGAAGCGTCTATGTGGCAGGATAAAGGACAAAAATGTTCTTGTAATTCTGGACGATGTTTGGGAACCAATTGACTTGGAGTCTGTTGGACTTCCTAGTGTAGCTACTTGTAAGATACTGCTGACATCTAGAAGTAGAAAAGCATTATCTGATATGGGTACGCATAAAGATTTCCAGCTTCACATTTTAGGAGAAGAAGAGACTTGGGCTTTATTTGAGAACAAGGCAGGCGATGTTGTTAAGGATCCCGCTATACAAACAGTAGCAAAACAAGTAGCCCAAAACTGCGGAGGTCTGCCTGTTTTGGTTGTCACAGTGGCAAGCGCTTTAAAGAATAGAACCACTCTACCTCCATGGAGGGACGCTTTGACATGCCTGCAAGAAGGGTCTGACAGAGATGACGAATTGACAGAAAAGGCATACTTGGGTCTAGAGTGGAGTTACAATCAGTTGACTGATAAGCAACTTAAGCCATTGTTCTTGTTATGTGGATATGCTGTGCAGTGGAATGATATTGTTTTGGACGACTTGTTGTACTATAGCGTGGGTTTGGGTTTTTTTGAAAAGCCCTACACAGTGGAGAAAGCACGAAATGCATTGTATTCGTGGGTTGAAAAACTCAAAGACTTTTGTCTGTTGGTAGAGAGCGATGATGATAGATATGTCACAATGCATGACCTTGTACGCAATGCTGCTAACCGGATTGCATCCAGAGATCCACAGATCTTAGCATTAGTGAAAGATGAAGATGAGGGTGGGTTGAAAGAATGGCCAGATAGAAGTTTCTTAGAGAAGTGCACAATCATCTCTTTGCCTTGTAACGGCAATTTTCCAAGCCTTCCGCAAGTTATGCAATGCCCAGCTCTAAGAATGTTTCTGTTGGAGGAAACTGATGAGAGAGACTCGAAACAGGAAAAGAACCTTGATGTTAACAGGGAGACACTTGTACAATCCATCCTCTTTGACGAAAAGCTGTTTTCCGAGGAGTCTCTACTTTTGGCGTTGGTCAGACTGTCTGAGTTAGTACTTCGTACTAAGGAGATGATTTACTTGGATTGCATTTTGTTCATTACAACTCTGTTTTCGGAAAAAGCCCGCTTTTCATTTTCTCAAAACATTATGAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

626

Amino Acids

71.6

Weight (kDa)

5.49

Isoelectric Point (pI)

43.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 167 - 328 2.1e-30 NB-ARC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 435
AciI CCGC 6 cut(s) 423, 433, 1002, 1041, 1595, 1849
AclWI GGATC 4 cut(s) 548, 992, 1005, 1463
AcoI YGGCCR 1 cut(s) 1523
AcsI RAATTY 2 cut(s) 352, 664
AcuI CTGAAG 2 cut(s) 539, 668
AfaI GTAC 8 cut(s) 53, 551, 913, 1289, 1437, 1701, 1779, 1786
AfeI AGCGCT 1 cut(s) 1078
AfiI CCNNNNNNNGG 2 cut(s) 439, 1574
AflII CTTAAG 1 cut(s) 1220
AhdI GACNNNNNGTC 3 cut(s) 44, 333, 832
AjiI CACGTC 1 cut(s) 74
AluBI AGCT 7 cut(s) 146, 364, 605, 857, 931, 1616, 1726
AluI AGCT 7 cut(s) 146, 364, 605, 857, 931, 1616, 1726
Alw21I GWGCWC 1 cut(s) 1553
Alw26I GTCTC 6 cut(s) 421, 731, 947, 1647, 1685, 1746
Alw44I GTGCAC 1 cut(s) 1549
AlwI GGATC 4 cut(s) 548, 992, 1005, 1463
Ama87I CYCGRG 1 cut(s) 126
Aor51HI AGCGCT 1 cut(s) 1078
AoxI GGCC 2 cut(s) 488, 1523
ApaLI GTGCAC 1 cut(s) 1549
ApeKI GCWGC 3 cut(s) 146, 282, 1445
ApoI RAATTY 2 cut(s) 352, 664
Asp700I GAANNNNTTC 1 cut(s) 681
AspLEI GCGC 1 cut(s) 1079
AspS9I GGNCC 1 cut(s) 38
AsuC2I CCSGG 1 cut(s) 674
AsuHPI GGTGA 1 cut(s) 206
AvaI CYCGRG 1 cut(s) 126
AvaII GGWCC 1 cut(s) 38
BaeGI GKGCMC 1 cut(s) 1553
BalI TGGCCA 1 cut(s) 1525
BamHI GGATCC 1 cut(s) 997
Bbv12I GWGCWC 1 cut(s) 1553
BbvI GCAGC 3 cut(s) 133, 294, 1432
BccI CCATC 2 cut(s) 542, 1715
BceAI ACGGC 1 cut(s) 1591
BcgI CGANNNNNNTGC 2 cut(s) 1338, 1372
BcnI CCSGG 1 cut(s) 674
BcoDI GTCTC 6 cut(s) 421, 731, 947, 1647, 1685, 1746
BfaI CTAG 4 cut(s) 150, 849, 882, 1184
BfmI CTRYAG 2 cut(s) 741, 1291
BfoI RGCGCY 1 cut(s) 1080
BfrI CTTAAG 1 cut(s) 1220
BglII AGATCT 2 cut(s) 679, 1476
BisI GCNGC 3 cut(s) 147, 283, 1446
BlpI GCTNAGC 1 cut(s) 344
BlsI GCNGC 3 cut(s) 148, 284, 1447
BmcAI AGTACT 1 cut(s) 1779
Bme1390I CCNGG 1 cut(s) 674
Bme18I GGWCC 1 cut(s) 38
BmeRI GACNNNNNGTC 3 cut(s) 44, 333, 832
BmeT110I CYCGRG 1 cut(s) 126
BmgBI CACGTC 1 cut(s) 74
BmgT120I GGNCC 1 cut(s) 38
BmiI GGNNCC 2 cut(s) 819, 999
BmrFI CCNGG 1 cut(s) 674
BmsI GCATC 2 cut(s) 456, 1469
BoxI GACNNNNGTC 1 cut(s) 1383
BplI GAGNNNNNCTC 2 cut(s) 1640, 1672
BpmI CTGGAG 2 cut(s) 140, 480
Bpu1102I GCTNAGC 1 cut(s) 344
BpuMI CCSGG 1 cut(s) 674
BsaJI CCNNGG 2 cut(s) 1106, 1734
BsaWI WCCGGW 1 cut(s) 1452
BsaXI ACNNNNNCTCC 2 cut(s) 1087, 1117
Bsc4I CCNNNNNNNGG 2 cut(s) 439, 1574
Bse1I ACTGG 4 cut(s) 123, 217, 463, 469
Bse3DI GCAATG 2 cut(s) 1447, 1613
BseDI CCNNGG 2 cut(s) 1106, 1734
BseGI GGATG 3 cut(s) 517, 1460, 1707
BseLI CCNNNNNNNGG 2 cut(s) 439, 1574
BseMI GCAATG 2 cut(s) 1447, 1613
BseMII CTCAG 2 cut(s) 335, 1761
BseNI ACTGG 4 cut(s) 123, 217, 463, 469
BseRI GAGGAG 2 cut(s) 254, 1751
BseSI GKGCMC 1 cut(s) 1553
BseXI GCAGC 3 cut(s) 133, 294, 1432
BseYI CCCAGC 1 cut(s) 1612
BsgI GTGCAG 1 cut(s) 1274
Bsh1236I CGCG 1 cut(s) 435
BshFI GGCC 2 cut(s) 490, 1525
BsiHKAI GWGCWC 1 cut(s) 1553
BsiHKCI CYCGRG 1 cut(s) 126
BsiSI CCGG 2 cut(s) 674, 1453
BslFI GGGAC 1 cut(s) 1127
BslI CCNNNNNNNGG 2 cut(s) 439, 1574
BsmAI GTCTC 6 cut(s) 421, 731, 947, 1647, 1685, 1746
BsmFI GGGAC 1 cut(s) 1127
BsmI GAATGC 1 cut(s) 284
BsnI GGCC 2 cut(s) 490, 1525
BsoBI CYCGRG 1 cut(s) 126
Bsp1286I GDGCHC 1 cut(s) 1553
Bsp1407I TGTACA 1 cut(s) 1699
Bsp143I GATC 7 cut(s) 243, 540, 613, 679, 997, 1468, 1476
Bsp1720I GCTNAGC 1 cut(s) 344
Bsp19I CCATGG 1 cut(s) 1106
BspACI CCGC 6 cut(s) 423, 433, 1002, 1041, 1595, 1849
BspANI GGCC 2 cut(s) 490, 1525
BspCNI CTCAG 2 cut(s) 336, 1762
BspFNI CGCG 1 cut(s) 435
BspLI GGNNCC 2 cut(s) 819, 999
BspPI GGATC 4 cut(s) 548, 992, 1005, 1463
BspTI CTTAAG 1 cut(s) 1220
BsrDI GCAATG 2 cut(s) 1447, 1613
BsrGI TGTACA 1 cut(s) 1699
BsrI ACTGG 4 cut(s) 123, 217, 463, 469
BssECI CCNNGG 2 cut(s) 1106, 1734
BssMI GATC 7 cut(s) 243, 540, 613, 679, 997, 1468, 1476
BssT1I CCWWGG 1 cut(s) 1106
Bst4CI ACNGT 5 cut(s) 58, 1015, 1069, 1330, 1767
Bst6I CTCTTC 3 cut(s) 184, 432, 945
BstAFI CTTAAG 1 cut(s) 1220
BstAPI GCANNNNNTGC 2 cut(s) 1346, 1603
BstAUI TGTACA 1 cut(s) 1699
BstC8I GCNNGC 6 cut(s) 305, 603, 982, 1075, 1130, 1849
BstDEI CTNAG 6 cut(s) 344, 1480, 1540, 1619, 1770, 1788
BstDSI CCRYGG 1 cut(s) 1106
BstF5I GGATG 3 cut(s) 517, 1460, 1707
BstFNI CGCG 1 cut(s) 435
BstH2I RGCGCY 1 cut(s) 1080
BstHHI GCGC 1 cut(s) 1079
BstKTI GATC 7 cut(s) 246, 543, 616, 682, 1000, 1471, 1479
BstMAI GTCTC 6 cut(s) 421, 731, 947, 1647, 1685, 1746
BstMBI GATC 7 cut(s) 243, 540, 613, 679, 997, 1468, 1476
BstMWI GCNNNNNNNGC 4 cut(s) 340, 1222, 1346, 1603
BstNSI RCATGY 1 cut(s) 1128
BstPAI GACNNNNGTC 1 cut(s) 1383
BstSCI CCNGG 1 cut(s) 672
BstSFI CTRYAG 2 cut(s) 741, 1291
BstSLI GKGCMC 1 cut(s) 1553
BstUI CGCG 1 cut(s) 435
BstV1I GCAGC 3 cut(s) 133, 294, 1432
BstX2I RGATCY 4 cut(s) 679, 997, 1468, 1476
BstYI RGATCY 4 cut(s) 679, 997, 1468, 1476
BsuRI GGCC 2 cut(s) 490, 1525
BtgI CCRYGG 1 cut(s) 1106
BtgZI GCGATG 2 cut(s) 999, 1416
BtrI CACGTC 1 cut(s) 74
BtsCI GGATG 3 cut(s) 517, 1460, 1707
BtsI GCAGTG 2 cut(s) 246, 1262
BtsIMutI CAGTG 4 cut(s) 246, 1074, 1262, 1335
Cac8I GCNNGC 6 cut(s) 305, 603, 982, 1075, 1130, 1849
CfoI GCGC 1 cut(s) 1079
Cfr13I GGNCC 1 cut(s) 38
CseI GACGC 3 cut(s) 323, 749, 1124
Csp6I GTAC 8 cut(s) 52, 550, 912, 1288, 1436, 1700, 1778, 1785
CviAII CATG 9 cut(s) 308, 331, 389, 420, 508, 712, 1107, 1125, 1427
CviQI GTAC 8 cut(s) 52, 550, 912, 1288, 1436, 1700, 1778, 1785
DdeI CTNAG 6 cut(s) 344, 1480, 1540, 1619, 1770, 1788
DpnI GATC 7 cut(s) 245, 542, 615, 681, 999, 1470, 1478
DpnII GATC 7 cut(s) 243, 540, 613, 679, 997, 1468, 1476
DraI TTTAAA 2 cut(s) 669, 1083
DriI GACNNNNNGTC 3 cut(s) 44, 333, 832
EaeI YGGCCR 1 cut(s) 1523
Eam1104I CTCTTC 3 cut(s) 184, 432, 945
Eam1105I GACNNNNNGTC 3 cut(s) 44, 333, 832
EarI CTCTTC 3 cut(s) 184, 432, 945
Eco130I CCWWGG 1 cut(s) 1106
Eco47I GGWCC 1 cut(s) 38
Eco47III AGCGCT 1 cut(s) 1078
Eco57I CTGAAG 2 cut(s) 539, 668
Eco88I CYCGRG 1 cut(s) 126
EcoRI GAATTC 1 cut(s) 352
EcoT14I CCWWGG 1 cut(s) 1106
EcoT22I ATGCAT 2 cut(s) 1351, 1428
ErhI CCWWGG 1 cut(s) 1106
FaeI CATG 9 cut(s) 311, 334, 392, 423, 511, 715, 1110, 1128, 1430
FalI AAGNNNNNCTT 2 cut(s) 1160, 1192
FaqI GGGAC 1 cut(s) 1127
FatI CATG 9 cut(s) 307, 330, 388, 419, 507, 711, 1106, 1124, 1426
FauI CCCGC 2 cut(s) 1009, 1856
Fnu4HI GCNGC 3 cut(s) 147, 283, 1446
FokI GGATG 3 cut(s) 524, 1447, 1694
Fsp4HI GCNGC 3 cut(s) 147, 283, 1446
FspBI CTAG 4 cut(s) 150, 849, 882, 1184
GlaI GCGC 1 cut(s) 1078
GluI GCNGC 3 cut(s) 147, 283, 1446
GsaI CCCAGC 1 cut(s) 1616
GsuI CTGGAG 2 cut(s) 140, 480
HaeII RGCGCY 1 cut(s) 1080
HaeIII GGCC 2 cut(s) 490, 1525
HapII CCGG 2 cut(s) 674, 1453
HgaI GACGC 3 cut(s) 323, 749, 1124
HhaI GCGC 1 cut(s) 1079
Hin1II CATG 9 cut(s) 311, 334, 392, 423, 511, 715, 1110, 1128, 1430
Hin6I GCGC 1 cut(s) 1077
HinP1I GCGC 1 cut(s) 1077
HincII GTYRAC 2 cut(s) 1206, 1684
HindII GTYRAC 2 cut(s) 1206, 1684
HinfI GANTC 6 cut(s) 201, 479, 523, 833, 1655, 1739
HpaI GTTAAC 1 cut(s) 1684
HpaII CCGG 2 cut(s) 674, 1453
HphI GGTGA 1 cut(s) 206
Hpy166II GTNNAC 6 cut(s) 54, 197, 550, 1206, 1551, 1684
Hpy188I TCNGA 9 cut(s) 297, 618, 687, 904, 1144, 1735, 1763, 1771, 1840
Hpy188III TCNNGA 6 cut(s) 268, 538, 803, 882, 1184, 1464
Hpy8I GTNNAC 6 cut(s) 54, 197, 550, 1206, 1551, 1684
HpyAV CCTTC 5 cut(s) 119, 393, 744, 1130, 1601
HpyCH4III ACNGT 5 cut(s) 58, 1015, 1069, 1330, 1767
HpyCH4IV ACGT 1 cut(s) 73
HpyF10VI GCNNNNNNNGC 4 cut(s) 340, 1222, 1346, 1603
HpyF3I CTNAG 6 cut(s) 344, 1480, 1540, 1619, 1770, 1788
HpySE526I ACGT 1 cut(s) 73
Hsp92II CATG 9 cut(s) 311, 334, 392, 423, 511, 715, 1110, 1128, 1430
HspAI GCGC 1 cut(s) 1077
KspAI GTTAAC 1 cut(s) 1684
Kzo9I GATC 7 cut(s) 243, 540, 613, 679, 997, 1468, 1476
Lsp1109I GCAGC 3 cut(s) 133, 294, 1432
LweI GCATC 2 cut(s) 456, 1469
MaeI CTAG 4 cut(s) 150, 849, 882, 1184
MaeII ACGT 1 cut(s) 73
MaeIII GTNAC 4 cut(s) 1063, 1193, 1417, 1571
MalI GATC 7 cut(s) 245, 542, 615, 681, 999, 1470, 1478
MboI GATC 7 cut(s) 243, 540, 613, 679, 997, 1468, 1476
MfeI CAATTG 3 cut(s) 18, 42, 822
MflI RGATCY 4 cut(s) 679, 997, 1468, 1476
MhlI GDGCHC 1 cut(s) 1553
MlsI TGGCCA 1 cut(s) 1525
MluNI TGGCCA 1 cut(s) 1525
MlyI GAGTC 3 cut(s) 842, 1649, 1748
MmeI TCCRAC 3 cut(s) 16, 820, 1614
Mox20I TGGCCA 1 cut(s) 1525
Mph1103I ATGCAT 2 cut(s) 1351, 1428
MroXI GAANNNNTTC 1 cut(s) 681
MscI TGGCCA 1 cut(s) 1525
MseI TTAA 5 cut(s) 668, 993, 1082, 1221, 1683
MslI CAYNNNNRTG 1 cut(s) 210
Msp20I TGGCCA 1 cut(s) 1525
MspCI CTTAAG 1 cut(s) 1220
MspI CCGG 2 cut(s) 674, 1453
MspR9I CCNGG 1 cut(s) 674
MunI CAATTG 3 cut(s) 18, 42, 822
Mva1269I GAATGC 1 cut(s) 284
MvnI CGCG 1 cut(s) 435
MwoI GCNNNNNNNGC 4 cut(s) 340, 1222, 1346, 1603
NciI CCSGG 1 cut(s) 674
NcoI CCATGG 1 cut(s) 1106
NdeII GATC 7 cut(s) 243, 540, 613, 679, 997, 1468, 1476
NlaIII CATG 9 cut(s) 311, 334, 392, 423, 511, 715, 1110, 1128, 1430
NlaIV GGNNCC 2 cut(s) 819, 999
NmuCI GTSAC 2 cut(s) 1063, 1417
NsiI ATGCAT 2 cut(s) 1351, 1428
NspI RCATGY 1 cut(s) 1128
PaeR7I CTCGAG 1 cut(s) 126
PctI GAATGC 1 cut(s) 284
PdmI GAANNNNTTC 1 cut(s) 681
PfeI GAWTC 3 cut(s) 201, 479, 523
PkrI GCNGC 3 cut(s) 148, 284, 1447
PleI GAGTC 3 cut(s) 841, 1649, 1747
PpsI GAGTC 3 cut(s) 841, 1649, 1747
PshAI GACNNNNGTC 1 cut(s) 1383
PspFI CCCAGC 1 cut(s) 1612
PspN4I GGNNCC 2 cut(s) 819, 999
PspPI GGNCC 1 cut(s) 38
PspXI VCTCGAGB 1 cut(s) 126
PsuI RGATCY 4 cut(s) 679, 997, 1468, 1476
RsaI GTAC 8 cut(s) 53, 551, 913, 1289, 1437, 1701, 1779, 1786
RsaNI GTAC 8 cut(s) 52, 550, 912, 1288, 1436, 1700, 1778, 1785
RseI CAYNNNNRTG 1 cut(s) 210
SaqAI TTAA 5 cut(s) 668, 993, 1082, 1221, 1683
SatI GCNGC 3 cut(s) 147, 283, 1446
Sau3AI GATC 7 cut(s) 243, 540, 613, 679, 997, 1468, 1476
Sau96I GGNCC 1 cut(s) 38
ScaI AGTACT 1 cut(s) 1779
SchI GAGTC 3 cut(s) 842, 1649, 1748
ScrFI CCNGG 1 cut(s) 674
SduI GDGCHC 1 cut(s) 1553
SfaNI GCATC 2 cut(s) 456, 1469
SfcI CTRYAG 2 cut(s) 741, 1291
Sfr274I CTCGAG 1 cut(s) 126
SinI GGWCC 1 cut(s) 38
SlaI CTCGAG 1 cut(s) 126
SmiMI CAYNNNNRTG 1 cut(s) 210
SmlI CTYRAG 2 cut(s) 126, 1220
SmoI CTYRAG 2 cut(s) 126, 1220
SsiI CCGC 6 cut(s) 423, 433, 1002, 1041, 1595, 1849
SspMI CTAG 4 cut(s) 150, 849, 882, 1184
StyD4I CCNGG 1 cut(s) 672
StyI CCWWGG 1 cut(s) 1106
TaaI ACNGT 5 cut(s) 58, 1015, 1069, 1330, 1767
TaiI ACGT 1 cut(s) 76
TaqI TCGA 3 cut(s) 127, 651, 1658
TatI WGTACW 3 cut(s) 1287, 1699, 1777
TfiI GAWTC 3 cut(s) 201, 479, 523
Tru1I TTAA 5 cut(s) 668, 993, 1082, 1221, 1683
Tru9I TTAA 5 cut(s) 668, 993, 1082, 1221, 1683
TscAI CASTG 4 cut(s) 253, 1074, 1262, 1335
TseFI GTSAC 2 cut(s) 1063, 1417
TseI GCWGC 3 cut(s) 146, 282, 1445
Tsp45I GTSAC 2 cut(s) 1063, 1417
TspDTI ATGAA 7 cut(s) 291, 405, 528, 728, 1512, 1810, 1845
TspGWI ACGGA 2 cut(s) 567, 762
TspRI CASTG 4 cut(s) 253, 1074, 1262, 1335
Vha464I CTTAAG 1 cut(s) 1220
VneI GTGCAC 1 cut(s) 1549
VpaK11BI GGWCC 1 cut(s) 38
XapI RAATTY 2 cut(s) 352, 664
XbaI TCTAGA 2 cut(s) 881, 1183
XceI RCATGY 1 cut(s) 1128
XhoI CTCGAG 1 cut(s) 126
XmnI GAANNNNTTC 1 cut(s) 681
XspI CTAG 4 cut(s) 150, 849, 882, 1184
ZrmI AGTACT 1 cut(s) 1779
Zsp2I ATGCAT 2 cut(s) 1351, 1428
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.