Rmu_sc0012840.1_g000006

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0012840.1
Physical Location & Seq
Reverse (-)
17675 .. 23760
6086 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0012840.1_g000006.1.cds

Sequence Viewer

Length: 4671 bp
atggagtttctttcaaagattgctgactacacgattgaacctgttatacgtctactgggacgccaagtgggttatgtaattcactgcaaaactaaccttcaaaaactacaggctcaagtggaagaattgaaagctgccagagaggcgatagagaataaggttgctgatgctgaaacaaaaggtgaaaaaattcaacctgatgtccagttctggctgaaaaaagcgggtgagatcactgcacagacagatgaattgttgaatgatgaaagccaagcaaagctgaaatgtttccatgggttttgtcctaatttgactactcgtcatcagcttagcagggaatcaacaaaattggtacaggaggttgttgaacagtatgaaaaaagagaattttcccaagtttcgtgcggtattcatcggaaagtggtatgggaaataactaccggagattaccaggcttttcaatcaaggatgccaattgtgaaggaaattatggatcatctgaaagactctgatattcagaggatggggttgtttggaattggaggggtgggtaaaaccacattggtcaaagaagtttacaagcaagcttcaggggataaaaagttatttgataatgtgattatgttattagctgtgaaaagtaacccagaccctgaagcaattcaaaagaaaattcttggagagttgggcatgatcattaatgaaaatgaaaatgaaaatgaaactgtagaaggaagagcgagtcgtctttgtgcccagatacaaggcaaaaagattcttgtgattttggatgatgttcaagaaaaaattgatttggaggttctgggacttccccgtctgccaacttgtaaaattttggtgacatgcagaactcgagatgttttatcttttaatgagatgcgtgcagataaagaattttcgctcgaccttttgggtaaagaagaaacgtggagtttatttgtgaagatggcaggtgacattgttaaacacaaaggtcatatacgagatgtagcagtccaagtagcggaaaaatgtggaggtttgcccttattaatcgtcactgttgcaagtgctttaaaagggaaaaataaattaggtcaatggaaagatgccttaagacgacttaaagagtttgataaagaagaattgacagaaaaggcatacatggctttggagtggagttataaccaattagatgataagaagcttaaaccgttattcttgctatccggaatcatagtgggggggaaccatatttatgtgcaagacttgttgaaatacggtgtgggtttaggtttgtttacaaatgtgaatacattggaagaagcacagaatgaattggatacactgcttggaaagcttaaagattcttgcttattgttggacggggatgttgacgacaaggtcagaatgcatgatcttgtatgtcatgttgctaaccggattgcatacagggatcatcacatgctatcaacagaatctggaggtgagtttaaaggatggccaaataaggatttcttgaaaaagtgcactaggatctctctcctgcgtgaaaatattcccacacttcccgaaatacctatggaatgcccagaactcaagatgttctacttgaataacagtaatgatgataacacggtgcaaatcccatccaacttctttagcaagatggaacaacttagagtgctggatttaaccaacatggatataccatcattgcctttatctcttcaatacttgaagaagcttcaaacgttgtgtttagatggctgcaaattgggagctataactctactggggcagctaagtagcttggaaattcttagtttttcaagatccaatcttaaacacttgcctaaagaagtaaggcaattgacttgtcttcggttgctggatttatctgattgcaatgaacttgaagttatttcgcctactgttatatcaagtttggtgagactggaagatttgagaatgagaaacagttttaaaaaatgggaggttgaaggtggaggaagtaatgcaagcctttcagagctgaagcatttgtctcggctatctgcattagaaatacgtattcagaatgttgatgctcttccagcaaacttgttctcccacaagttagaaagattcaatatttttattggggatgcgtgggatgcgagatctccatggaagaaacttaggaataggatgaccctcaacacgttaaaactcaagcttactaaaggattagatgaaagcctaaaatcgctaataaagaattctggagatttgtccttagatgagacagaggttgttattgtccaagatttgaatgccgaagattttgagaatatgatacatctccagctccaaaacaatgttgattttatggctatggttaacaagaaggttgtgttccccaacttagcaaccttatcggtccatcgatgtgataatttaaaatttttgttctcatcttctatggctaaaagtcttgtggaactcacacatttagagatatccgcatgtaaactcctgcaagagatagtatcatcaacaagtgaaggcggtgaagacaatatggataacatgttccttaaacttaaagttttgaagcttgaagaacttccaaacctcgctatattcagcacaggaaattatattgagtttctgtcattggaagaactggaggtaaagggttgtgataatttgagggtaatcattggtgataaagttactatgggtagtaaagacactagaagctgcaaagaaactgaacaaaaggtcttgaaagatgaagagaaccttgaagtcacaaatgagatcgttgtgaaatactccatttttaacgaaaaggtcgtgttgcacaacttagcaaccttgtgggttcatggatgtgataatttaaaagttttgttctcattttccatggctaaaagtcttgtacttctcaaacatctaaatgtatccggttgtaaactcctgcaagagattgtatcatcaacaagagaaggcggtgaagacaatattgatgacatgtttcctaaacttgaagttttgaatcttgaagcacttccaaacctggctagatttagcacaggaaattatattcagtttccgtcattggaagaattggaggtaaatgattgtgataatctgggggtattcattggtgataaagtttctatgagtagtgaggacactagaagatgcaaagaagatgaacagatggtcttggaggaggaagagaaccttgaagtcaggagtgagtccgttgtaaaatactccctctttaatgaaaaggtgggatttcctatcttggaaagattgatcatcacagggataagggagttgaaggcgatatggcacgtccaactatctcaaaactcttttcggagactcaagcaagttgaggttcgggaatgtgacaatctaataagtttgtttccgcctagtgtcatgagaagattggatacgctggaaaccttgaagatacggaactgcaaattactagaagcggtatgtgaggaaattgttgttgcagaagaggaacaagaagttgtagaaacaacaccttctccatttgtatttctaaaagtaacatccgtggagttgaggaatctacctcaacgtacgagttgcataaatgcttcacagtggccatcactcaaacgattggaggtggagggatgtgataaagtgggaatttttgccacagaatgttctcactttagaaagaaatatgagatggaacctctaatgacgtctcaaaagccactatttctaaccgacaaggattcgttcctcgacttggaatacttatcattgtttgacatggaaatttgggatggaccacccccagcggatcagttggtgtttggcaaattaaaatcaatctactttactgggaattgtgcacctttctccaagcaagcttcggtccttttcctccagagattacaaaatcttgaagaaattgaaatgcgagacaactcttacgaaagaattagtggttgcactactagggaagaaatacatgatgatgcagtcgggagtgggaccctcccccgtgtaaggagtttgacgctgcgttggatggaccaattgatggatctagagaacgacaactcccgatcactactttttccaaatttggaaacccttaagctgcgcttttgttccagattaaaaagtatagagtcatccgcaatatccttccggaatcttacagctttgaaagtatggttttgtgatggatttgaatatataacaagttattcagtggctaaaagcttagtgcaactcaaaacattggaggtggcctactgtctaagtgttgtagtgatagtggcaagcaatgtgggagacgatgatgctgatgatgcccctggaaatgagattgttttcagccacttgcaatatttgggtctacttaatctaccaaggctacaaggcttttcctccgaaaattgcacagtcaaattcccatcctccatgaccttacaagtatattcatgcccgatcaagttgaagatttcccccgatggggtcctcctaagagtaatagaggatcaatgtgagcaaaaaggagatgatgacattgacaataatgatgatgatcaacagaaaaatgatgttgaatcagctcggagaactcctaaaatatcatcagaagagcctgccctctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1556

Amino Acids

176.51

Weight (kDa)

5.26

Isoelectric Point (pI)

41.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1185
AarI CACCTGC 1 cut(s) 962
AasI GACNNNNNNGTC 2 cut(s) 834, 1403
AatII GACGTC 1 cut(s) 3749
Acc36I ACCTGC 1 cut(s) 962
AccB7I CCANNNNNTGG 1 cut(s) 4090
AccI GTMKAC 2 cut(s) 52, 4411
AccIII TCCGGA 2 cut(s) 1229, 4200
AclI AACGTT 1 cut(s) 1754
AclWI GGATC 7 cut(s) 501, 1464, 1544, 1830, 3855, 4101, 4560
AcoI YGGCCR 2 cut(s) 1502, 3641
AcuI CTGAAG 3 cut(s) 573, 675, 2057
AcyI GRCGYC 2 cut(s) 61, 3746
AfaI GTAC 3 cut(s) 354, 2928, 3616
AfiI CCNNNNNNNGG 6 cut(s) 1024, 3793, 4056, 4090, 4527, 4528
AflII CTTAAG 2 cut(s) 1114, 4145
AflIII ACRYGT 3 cut(s) 2202, 2571, 3018
AhdI GACNNNNNGTC 1 cut(s) 318
AjiI CACGTC 1 cut(s) 3352
AjnI CCWGG 3 cut(s) 450, 3063, 4369
AloI GAACNNNNNNTCC 4 cut(s) 2558, 2590, 4094, 4126
Alw21I GWGCWC 2 cut(s) 1532, 3901
Alw26I GTCTC 7 cut(s) 1948, 2052, 2279, 3373, 3753, 3963, 4341
Alw44I GTGCAC 2 cut(s) 1528, 3897
AlwI GGATC 7 cut(s) 501, 1464, 1544, 1830, 3855, 4101, 4560
AlwNI CAGNNNCTG 2 cut(s) 653, 1481
Ama87I CYCGRG 1 cut(s) 873
Aor13HI TCCGGA 2 cut(s) 1229, 4200
AoxI GGCC 3 cut(s) 1502, 3641, 4302
ApaLI GTGCAC 2 cut(s) 1528, 3897
ApeKI GCWGC 6 cut(s) 134, 1770, 1801, 2745, 4069, 4150
AseI ATTAAT 2 cut(s) 699, 1052
Asp700I GAANNNNTTC 6 cut(s) 189, 287, 660, 1557, 2607, 3054
AspLEI GCGC 1 cut(s) 4155
AspS9I GGNCC 6 cut(s) 2422, 3833, 3922, 4041, 4081, 4531
AvaI CYCGRG 1 cut(s) 873
AvaII GGWCC 6 cut(s) 2422, 3833, 3922, 4041, 4081, 4531
BaeGI GKGCMC 3 cut(s) 757, 1532, 3901
BalI TGGCCA 2 cut(s) 1504, 3643
BarI GAAGNNNNNNTAC 2 cut(s) 3439, 3471
BbsI GAAGAC 3 cut(s) 1874, 2562, 3009
Bbv12I GWGCWC 2 cut(s) 1532, 3901
BbvI GCAGC 6 cut(s) 121, 1757, 1813, 2732, 4056, 4137
BcgI CGANNNNNNTGC 4 cut(s) 2030, 2064, 2400, 2434
BciT130I CCWGG 3 cut(s) 452, 3065, 4371
BciVI GTATCC 3 cut(s) 1336, 2959, 3448
BclI TGATCA 3 cut(s) 693, 3312, 4600
BcoDI GTCTC 7 cut(s) 1948, 2052, 2279, 3373, 3753, 3963, 4341
BfaI CTAG 9 cut(s) 1533, 2739, 3069, 3186, 3435, 3494, 4005, 4097, 4669
BfmI CTRYAG 2 cut(s) 107, 726
BfrI CTTAAG 2 cut(s) 1114, 4145
BfuAI ACCTGC 1 cut(s) 962
BfuI GTATCC 3 cut(s) 1336, 2959, 3448
BglI GCCNNNNNGGC 1 cut(s) 143
BglII AGATCT 1 cut(s) 2162
BisI GCNGC 6 cut(s) 135, 1771, 1802, 2746, 4070, 4151
BlpI GCTNAGC 1 cut(s) 329
BlsI GCNGC 6 cut(s) 136, 1772, 1803, 2747, 4071, 4152
Bme1390I CCNGG 3 cut(s) 452, 3065, 4371
Bme18I GGWCC 6 cut(s) 2422, 3833, 3922, 4041, 4081, 4531
BmeRI GACNNNNNGTC 1 cut(s) 318
BmeT110I CYCGRG 1 cut(s) 873
BmgBI CACGTC 1 cut(s) 3352
BmgT120I GGNCC 6 cut(s) 2422, 3833, 3922, 4041, 4081, 4531
BmiI GGNNCC 5 cut(s) 1250, 3735, 4042, 4043, 4532
BmrFI CCNGG 3 cut(s) 452, 3065, 4371
BmrI ACTGGG 3 cut(s) 65, 1805, 3897
BmuI ACTGGG 3 cut(s) 65, 1805, 3897
BpiI GAAGAC 3 cut(s) 1874, 2562, 3009
BpmI CTGGAG 5 cut(s) 1503, 2286, 2330, 2690, 3917
Bpu1102I GCTNAGC 1 cut(s) 329
BpuEI CTTGAG 4 cut(s) 99, 1583, 2198, 3368
Bsa29I ATCGAT 1 cut(s) 2428
BsaAI YACGTR 1 cut(s) 2072
BsaBI GATNNNNATC 1 cut(s) 4599
BsaHI GRCGYC 2 cut(s) 61, 3746
BsaJI CCNNGG 6 cut(s) 292, 2168, 2910, 3588, 4369, 4424
BsaWI WCCGGW 5 cut(s) 440, 1229, 1440, 2951, 4200
BsaXI ACNNNNNCTCC 6 cut(s) 2093, 2123, 3544, 3574, 4094, 4124
Bsc4I CCNNNNNNNGG 6 cut(s) 1024, 3793, 4056, 4090, 4527, 4528
Bse1I ACTGG 6 cut(s) 60, 205, 1800, 1962, 2673, 3892
Bse3DI GCAATG 3 cut(s) 1715, 1915, 4345
Bse8I GATNNNNATC 1 cut(s) 4599
BseAI TCCGGA 2 cut(s) 1229, 4200
BseBI CCWGG 3 cut(s) 452, 3065, 4371
BseCI ATCGAT 1 cut(s) 2428
BseDI CCNNGG 6 cut(s) 292, 2168, 2910, 3588, 4369, 4424
BseJI GATNNNNATC 1 cut(s) 4599
BseLI CCNNNNNNNGG 6 cut(s) 1024, 3793, 4056, 4090, 4527, 4528
BseMI GCAATG 3 cut(s) 1715, 1915, 4345
BseNI ACTGG 6 cut(s) 60, 205, 1800, 1962, 2673, 3892
BseRI GAGGAG 1 cut(s) 3236
BseSI GKGCMC 3 cut(s) 757, 1532, 3901
BseXI GCAGC 6 cut(s) 121, 1757, 1813, 2732, 4056, 4137
BseYI CCCAGC 1 cut(s) 3841
BsgI GTGCAG 2 cut(s) 222, 924
BshFI GGCC 3 cut(s) 1504, 3643, 4304
BshVI ATCGAT 1 cut(s) 2428
BsiHKAI GWGCWC 2 cut(s) 1532, 3901
BsiHKCI CYCGRG 1 cut(s) 873
BsiSI CCGG 5 cut(s) 441, 1230, 1441, 2952, 4201
BsiWI CGTACG 1 cut(s) 3614
BslFI GGGAC 3 cut(s) 72, 840, 4054
BslI CCNNNNNNNGG 6 cut(s) 1024, 3793, 4056, 4090, 4527, 4528
BsmAI GTCTC 7 cut(s) 1948, 2052, 2279, 3373, 3753, 3963, 4341
BsmBI CGTCTC 2 cut(s) 3753, 4341
BsmFI GGGAC 3 cut(s) 72, 840, 4054
BsmI GAATGC 3 cut(s) 1416, 1592, 2320
BsnI GGCC 3 cut(s) 1504, 3643, 4304
BsoBI CYCGRG 1 cut(s) 873
Bsp1286I GDGCHC 3 cut(s) 757, 1532, 3901
Bsp13I TCCGGA 2 cut(s) 1229, 4200
Bsp1720I GCTNAGC 1 cut(s) 329
Bsp19I CCATGG 3 cut(s) 292, 2168, 2910
BspANI GGCC 3 cut(s) 1504, 3643, 4304
BspDI ATCGAT 1 cut(s) 2428
BspEI TCCGGA 2 cut(s) 1229, 4200
BspHI TCATGA 1 cut(s) 3441
BspLI GGNNCC 5 cut(s) 1250, 3735, 4042, 4043, 4532
BspMI ACCTGC 1 cut(s) 962
BspPI GGATC 7 cut(s) 501, 1464, 1544, 1830, 3855, 4101, 4560
BspQI GCTCTTC 3 cut(s) 730, 2097, 4650
BspTI CTTAAG 2 cut(s) 1114, 4145
BsrDI GCAATG 3 cut(s) 1715, 1915, 4345
BsrI ACTGG 6 cut(s) 60, 205, 1800, 1962, 2673, 3892
BssECI CCNNGG 6 cut(s) 292, 2168, 2910, 3588, 4369, 4424
BssNI GRCGYC 2 cut(s) 61, 3746
BssT1I CCWWGG 4 cut(s) 292, 2168, 2910, 4424
Bst2UI CCWGG 3 cut(s) 452, 3065, 4371
Bst6I CTCTTC 7 cut(s) 730, 1734, 2097, 2775, 3222, 3522, 4650
BstACI GRCGYC 2 cut(s) 61, 3746
BstAFI CTTAAG 2 cut(s) 1114, 4145
BstBAI YACGTR 1 cut(s) 2072
BstC8I GCNNGC 6 cut(s) 585, 903, 2023, 3915, 4336, 4662
BstDSI CCRYGG 4 cut(s) 292, 2168, 2910, 3588
BstHHI GCGC 1 cut(s) 4155
BstMAI GTCTC 7 cut(s) 1948, 2052, 2279, 3373, 3753, 3963, 4341
BstMWI GCNNNNNNNGC 6 cut(s) 143, 1166, 1357, 2096, 2156, 4364
BstNI CCWGG 3 cut(s) 452, 3065, 4371
BstNSI RCATGY 5 cut(s) 867, 1468, 2511, 2575, 3022
BstSCI CCNGG 3 cut(s) 450, 3063, 4369
BstSFI CTRYAG 2 cut(s) 107, 726
BstSLI GKGCMC 3 cut(s) 757, 1532, 3901
BstSNI TACGTA 1 cut(s) 2072
BstV1I GCAGC 6 cut(s) 121, 1757, 1813, 2732, 4056, 4137
BstV2I GAAGAC 3 cut(s) 1874, 2562, 3009
BstX2I RGATCY 4 cut(s) 1536, 1835, 2162, 4093
BstYI RGATCY 4 cut(s) 1536, 1835, 2162, 4093
Bsu15I ATCGAT 1 cut(s) 2428
BsuI GTATCC 3 cut(s) 1336, 2959, 3448
BsuRI GGCC 3 cut(s) 1504, 3643, 4304
BsuTUI ATCGAT 1 cut(s) 2428
BtgI CCRYGG 4 cut(s) 292, 2168, 2910, 3588
BtrI CACGTC 1 cut(s) 3352
BtsI GCAGTG 3 cut(s) 82, 234, 1346
BtsIMutI CAGTG 6 cut(s) 82, 234, 1059, 1346, 3644, 4269
BveI ACCTGC 1 cut(s) 962
Cac8I GCNNGC 6 cut(s) 585, 903, 2023, 3915, 4336, 4662
CaiI CAGNNNCTG 2 cut(s) 653, 1481
CciI TCATGA 1 cut(s) 3441
CfoI GCGC 1 cut(s) 4155
Cfr13I GGNCC 6 cut(s) 2422, 3833, 3922, 4041, 4081, 4531
ClaI ATCGAT 1 cut(s) 2428
CseI GACGC 2 cut(s) 69, 4075
Csp6I GTAC 3 cut(s) 353, 2927, 3615
CspCI CAANNNNNGTGG 2 cut(s) 4323, 4358
CviQI GTAC 3 cut(s) 353, 2927, 3615
DraI TTTAAA 5 cut(s) 1077, 1495, 1987, 2442, 2889
DrdI GACNNNNNNGTC 2 cut(s) 834, 1403
DriI GACNNNNNGTC 1 cut(s) 318
DseDI GACNNNNNNGTC 2 cut(s) 834, 1403
EaeI YGGCCR 2 cut(s) 1502, 3641
Eam1104I CTCTTC 7 cut(s) 730, 1734, 2097, 2775, 3222, 3522, 4650
Eam1105I GACNNNNNGTC 1 cut(s) 318
EarI CTCTTC 7 cut(s) 730, 1734, 2097, 2775, 3222, 3522, 4650
EciI GGCGGA 1 cut(s) 3420
Eco105I TACGTA 1 cut(s) 2072
Eco130I CCWWGG 4 cut(s) 292, 2168, 2910, 4424
Eco32I GATATC 1 cut(s) 2502
Eco47I GGWCC 6 cut(s) 2422, 3833, 3922, 4041, 4081, 4531
Eco57I CTGAAG 3 cut(s) 573, 675, 2057
Eco88I CYCGRG 1 cut(s) 873
EcoO109I RGGNCCY 2 cut(s) 4041, 4531
EcoRI GAATTC 1 cut(s) 2260
EcoRII CCWGG 3 cut(s) 450, 3063, 4369
EcoRV GATATC 1 cut(s) 2502
EcoT14I CCWWGG 4 cut(s) 292, 2168, 2910, 4424
EcoT22I ATGCAT 1 cut(s) 1416
ErhI CCWWGG 4 cut(s) 292, 2168, 2910, 4424
Esp3I CGTCTC 2 cut(s) 3753, 4341
FalI AAGNNNNNCTT 8 cut(s) 1502, 1534, 2772, 2804, 3219, 3251, 4139, 4171
FaqI GGGAC 3 cut(s) 72, 840, 4054
FauI CCCGC 1 cut(s) 217
FbaI TGATCA 3 cut(s) 693, 3312, 4600
FblI GTMKAC 2 cut(s) 52, 4411
Fnu4HI GCNGC 6 cut(s) 135, 1771, 1802, 2746, 4070, 4151
Fsp4HI GCNGC 6 cut(s) 135, 1771, 1802, 2746, 4070, 4151
FspBI CTAG 9 cut(s) 1533, 2739, 3069, 3186, 3435, 3494, 4005, 4097, 4669
GlaI GCGC 1 cut(s) 4154
GluI GCNGC 6 cut(s) 135, 1771, 1802, 2746, 4070, 4151
GsaI CCCAGC 1 cut(s) 3845
GsuI CTGGAG 5 cut(s) 1503, 2286, 2330, 2690, 3917
HaeIII GGCC 3 cut(s) 1504, 3643, 4304
HapII CCGG 5 cut(s) 441, 1230, 1441, 2952, 4201
HgaI GACGC 2 cut(s) 69, 4075
HhaI GCGC 1 cut(s) 4155
Hin1I GRCGYC 2 cut(s) 61, 3746
Hin6I GCGC 1 cut(s) 4153
HinP1I GCGC 1 cut(s) 4153
HincII GTYRAC 2 cut(s) 1396, 2383
HindII GTYRAC 2 cut(s) 1396, 2383
HindIII AAGCTT 8 cut(s) 585, 1205, 1358, 1745, 2216, 2597, 3915, 4273
HpaI GTTAAC 1 cut(s) 2383
HpaII CCGG 5 cut(s) 441, 1230, 1441, 2952, 4201
HpyCH4IV ACGT 8 cut(s) 49, 947, 1754, 2071, 2204, 3351, 3613, 3746
HpyF10VI GCNNNNNNNGC 6 cut(s) 143, 1166, 1357, 2096, 2156, 4364
HpySE526I ACGT 8 cut(s) 49, 947, 1754, 2071, 2204, 3351, 3613, 3746
Hsp92I GRCGYC 2 cut(s) 61, 3746
HspAI GCGC 1 cut(s) 4153
KflI GGGWCCC 1 cut(s) 4041
Kpn2I TCCGGA 2 cut(s) 1229, 4200
Ksp22I TGATCA 3 cut(s) 693, 3312, 4600
KspAI GTTAAC 1 cut(s) 2383
LguI GCTCTTC 3 cut(s) 730, 2097, 4650
LmnI GCTCC 2 cut(s) 1781, 2355
Lsp1109I GCAGC 6 cut(s) 121, 1757, 1813, 2732, 4056, 4137
MaeI CTAG 9 cut(s) 1533, 2739, 3069, 3186, 3435, 3494, 4005, 4097, 4669
MaeII ACGT 8 cut(s) 49, 947, 1754, 2071, 2204, 3351, 3613, 3746
MaeIII GTNAC 8 cut(s) 641, 859, 974, 1057, 2716, 2794, 3407, 3580
MfeI CAATTG 3 cut(s) 474, 1871, 4085
MflI RGATCY 4 cut(s) 1536, 1835, 2162, 4093
MhlI GDGCHC 3 cut(s) 757, 1532, 3901
MlsI TGGCCA 2 cut(s) 1504, 3643
MluNI TGGCCA 2 cut(s) 1504, 3643
MlyI GAGTC 5 cut(s) 500, 751, 3260, 3375, 4190
MmeI TCCRAC 4 cut(s) 1362, 1677, 3379, 4055
Mox20I TGGCCA 2 cut(s) 1504, 3643
Mph1103I ATGCAT 1 cut(s) 1416
MroI TCCGGA 2 cut(s) 1229, 4200
MroXI GAANNNNTTC 6 cut(s) 189, 287, 660, 1557, 2607, 3054
MscI TGGCCA 2 cut(s) 1504, 3643
MslI CAYNNNNRTG 5 cut(s) 1257, 2430, 2877, 2943, 4023
Msp20I TGGCCA 2 cut(s) 1504, 3643
MspA1I CMGCKG 1 cut(s) 3845
MspCI CTTAAG 2 cut(s) 1114, 4145
MspI CCGG 5 cut(s) 441, 1230, 1441, 2952, 4201
MspR9I CCNGG 3 cut(s) 452, 3065, 4371
MunI CAATTG 3 cut(s) 474, 1871, 4085
Mva1269I GAATGC 3 cut(s) 1416, 1592, 2320
MvaI CCWGG 3 cut(s) 452, 3065, 4371
MwoI GCNNNNNNNGC 6 cut(s) 143, 1166, 1357, 2096, 2156, 4364
NcoI CCATGG 3 cut(s) 292, 2168, 2910
NlaIV GGNNCC 5 cut(s) 1250, 3735, 4042, 4043, 4532
NmeAIII GCCGAG 1 cut(s) 2029
NmuCI GTSAC 5 cut(s) 859, 974, 1057, 2794, 3407
NsiI ATGCAT 1 cut(s) 1416
NspI RCATGY 5 cut(s) 867, 1468, 2511, 2575, 3022
PaeR7I CTCGAG 1 cut(s) 873
PagI TCATGA 1 cut(s) 3441
PaqCI CACCTGC 1 cut(s) 962
PciI ACATGT 2 cut(s) 2571, 3018
PciSI GCTCTTC 3 cut(s) 730, 2097, 4650
PcsI WCGNNNNNNNCGW 1 cut(s) 2838
PctI GAATGC 3 cut(s) 1416, 1592, 2320
PdmI GAANNNNTTC 6 cut(s) 189, 287, 660, 1557, 2607, 3054
Pfl23II CGTACG 1 cut(s) 3614
PflFI GACNNNGTC 1 cut(s) 1403
PflMI CCANNNNNTGG 1 cut(s) 4090
PkrI GCNGC 6 cut(s) 136, 1772, 1803, 2747, 4071, 4152
PleI GAGTC 5 cut(s) 500, 750, 3259, 3375, 4189
PpsI GAGTC 5 cut(s) 500, 750, 3259, 3375, 4189
Ppu21I YACGTR 1 cut(s) 2072
PpuMI RGGWCCY 2 cut(s) 4041, 4531
PscI ACATGT 2 cut(s) 2571, 3018
PshBI ATTAAT 2 cut(s) 699, 1052
PsiI TTATAA 1 cut(s) 1185
Psp1406I AACGTT 1 cut(s) 1754
Psp5II RGGWCCY 2 cut(s) 4041, 4531
Psp6I CCWGG 3 cut(s) 450, 3063, 4369
PspFI CCCAGC 1 cut(s) 3841
PspGI CCWGG 3 cut(s) 450, 3063, 4369
PspLI CGTACG 1 cut(s) 3614
PspN4I GGNNCC 5 cut(s) 1250, 3735, 4042, 4043, 4532
PspPI GGNCC 6 cut(s) 2422, 3833, 3922, 4041, 4081, 4531
PspPPI RGGWCCY 2 cut(s) 4041, 4531
PsrI GAACNNNNNNTAC 2 cut(s) 30, 62
PstNI CAGNNNCTG 2 cut(s) 653, 1481
PsuI RGATCY 4 cut(s) 1536, 1835, 2162, 4093
PsyI GACNNNGTC 1 cut(s) 1403
RsaI GTAC 3 cut(s) 354, 2928, 3616
RsaNI GTAC 3 cut(s) 353, 2927, 3615
RseI CAYNNNNRTG 5 cut(s) 1257, 2430, 2877, 2943, 4023
SapI GCTCTTC 3 cut(s) 730, 2097, 4650
SatI GCNGC 6 cut(s) 135, 1771, 1802, 2746, 4070, 4151
Sau96I GGNCC 6 cut(s) 2422, 3833, 3922, 4041, 4081, 4531
SchI GAGTC 5 cut(s) 500, 751, 3260, 3375, 4190
ScrFI CCNGG 3 cut(s) 452, 3065, 4371
SduI GDGCHC 3 cut(s) 757, 1532, 3901
SfcI CTRYAG 2 cut(s) 107, 726
Sfr274I CTCGAG 1 cut(s) 873
SinI GGWCC 6 cut(s) 2422, 3833, 3922, 4041, 4081, 4531
SlaI CTCGAG 1 cut(s) 873
SmiMI CAYNNNNRTG 5 cut(s) 1257, 2430, 2877, 2943, 4023
SmlI CTYRAG 7 cut(s) 114, 873, 1114, 1598, 2213, 3383, 4145
SmoI CTYRAG 7 cut(s) 114, 873, 1114, 1598, 2213, 3383, 4145
SnaBI TACGTA 1 cut(s) 2072
SspI AATATT 4 cut(s) 1558, 2134, 3010, 4403
SspMI CTAG 9 cut(s) 1533, 2739, 3069, 3186, 3435, 3494, 4005, 4097, 4669
StyD4I CCNGG 3 cut(s) 450, 3063, 4369
StyI CCWWGG 4 cut(s) 292, 2168, 2910, 4424
TaiI ACGT 8 cut(s) 52, 950, 1757, 2074, 2207, 3354, 3616, 3749
TaqI TCGA 4 cut(s) 874, 924, 2428, 3789
TaqII GACCGA 2 cut(s) 2410, 3910
TatI WGTACW 1 cut(s) 2926
TscAI CASTG 6 cut(s) 89, 241, 1066, 1353, 3644, 4269
TseFI GTSAC 5 cut(s) 859, 974, 1057, 2794, 3407
TseI GCWGC 6 cut(s) 134, 1770, 1801, 2745, 4069, 4150
Tsp45I GTSAC 5 cut(s) 859, 974, 1057, 2794, 3407
TspGWI ACGGA 4 cut(s) 3090, 3244, 3493, 3577
TspRI CASTG 6 cut(s) 89, 241, 1066, 1353, 3644, 4269
Tth111I GACNNNGTC 1 cut(s) 1403
Van91I CCANNNNNTGG 1 cut(s) 4090
Vha464I CTTAAG 2 cut(s) 1114, 4145
VneI GTGCAC 2 cut(s) 1528, 3897
VpaK11BI GGWCC 6 cut(s) 2422, 3833, 3922, 4041, 4081, 4531
VspI ATTAAT 2 cut(s) 699, 1052
XbaI TCTAGA 1 cut(s) 4096
XceI RCATGY 5 cut(s) 867, 1468, 2511, 2575, 3022
XhoI CTCGAG 1 cut(s) 873
XmiI GTMKAC 2 cut(s) 52, 4411
XmnI GAANNNNTTC 6 cut(s) 189, 287, 660, 1557, 2607, 3054
XspI CTAG 9 cut(s) 1533, 2739, 3069, 3186, 3435, 3494, 4005, 4097, 4669
ZraI GACGTC 1 cut(s) 3747
Zsp2I ATGCAT 1 cut(s) 1416
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.