MD08G1083600.v1.1

disease resistance

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
Physical Location & Seq
Forward (+)
6934357 .. 6940510
6154 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1083600.v1.1.491

Sequence Viewer

Length: 2181 bp
ATGAGCTGTCTCCGTGGGGTTTGTCCAAACCCGGTGCTCCGTTACAAGCTAGGCAGGAGATCAACAAAGTTGGAGCAGGCGGTTGTTGAGCTCTACGACAAAGGAAATTTCGCTAGGCAGGACATTTCGTACAATGTCCGCCCACAAGAGGTATCCGTGGTTTCGCACAAACAGTATGAGGCATTTGATTCGAGGACTTCAACTGTAAAGAAAATCATGGATGAACTGAGAATTCCTAATACCGACCTGATTTTGGTGTATGGTATTGGAGGCGTGGGGAAGACCACACTGGTTGAAGAAGTCCTTAGGCAAGCTGTAAAAGAGAATTTATTTGCCGATGTGGTTATGGTAAGAAGTGTGCAAAAGCCGGACCTTGAAGGACTTCAAAAAGAAATTGCCAAAAAGTTAGGTATGGAAGTTCGTGATAGCGATACTATGTCAGAAAGAGCACCTCATCTATGTGACAAGAAAGTTCTTGTAATTTTAGACAACATTTTGGAAAGCATTGACTTGCAGAGTGTTGGACTTCCTTGTCTGCCGACTTGTAGAATACTGTTGACATCCAGAACTCGAAAACTGCTATCCTCAGAGCGGTCGCGAAAAGACTTTGAGCTTCGAGTTTTAAACGAGGAAGAAGCTTGGCGTTTATTTGAGACGAAAGCAGGTGATGTTGTTAAAAATCCCGACATACGAACTGTGGCAACTGATGTAGCCAAAAAATGTGGAGGTTTGCCACTTTTGGTTGTCACAGTCGCAAGCTCTTTAAGAAATAGAAGTACTTTACCACTATGGAAGGATGCCTTGAGAAGCCTAGAAGTGTTCGACAACGAAGACCAAAAGAAAGCATACTCGGCTTTAGAGTGGAGTTACAGTCAATTGGATGATCGAAAGCTTAAGCCATTATTCTTGATCTGTGGAATTTTGGTAAATCATTTTGGAGATGCTTCTCTGACAGACTTGTTGAAATATACAATTGGTTTGGGTTTGTTTAAGGACATTGATTCAGTGGAGTACTCACAATATGCATTGCACAAGCGGATTGAAGAGCTTAAAGATTCTTGTCTGTTACTCGACTCCGAGGACAATACATCAATCACAATGCATGATTTGTTACGTGATTTTGCCATCTCGATTGCATCAAAAGACCAACGTGCCTTACTAAGAGCAGATGGAGATGAGTTGAAGGAATGGCCAAACAATAAGGAGTTTTCTGAAAATTGCACAATGATCTCTTTGTCTTGCGAAAACATCCCTAGGCTTCCTGAAGTTTTGAAATGCCAACAACTGGAGTTTTTTCATTTGTACTTTAATGGTGACTTGCTTGAAATCCCAGGTAACTTCTTTGAGGAGATGAAAGAGCTTAAAGTTATGGATTTAACCAAAGCGCGTATTTCGTCGCTGCCTCCATCTCTTCATCTCCTACAAAATCTTCGGACATTGTGTTTGGATGTTTGCGTGTTGGGAGACGTAGCTCTAGTCGGACAGCTATCGCAACTAGAAATTCTCAGCTTTATATATTCCAAGTTTAAAGAGTTGCCTGAAGAAATAGGGAAATTGACTCGTCTTCGACTGCTGGATTTAAGCGGCTGCTCTGAACTCGAAGTGATTTCACCTAATGTTATATCACGTTTGACAAGTCTAGAAGACTTGAGAATGAAAGAGAGCTTCAACGGATGGGTGCCCGAAGGAGTAAGCGGAGAAAGAAGTAATGCTAGCCTTTCGGAACTGAAGGACTTGCCTCGTTTAGCTGCATTAAGCATACATGTTCCAGATGCTGGCAGTATTCCGACTGACTTGTTCACTGACAAGTTAAAAAGATACCAAATATTAATCGGCACTTTTTATTGGGAATGGATAGGTGTGGATGAAACCCTCAACACATTGAAGCTAAACCTCCCTACTGGCTGTGAATTGGACCGTGGTCTAGAAATGTTGTTGAAGAGATCATGTGAAGATTTGTATTTGGATGGGTCGAACGGAGCTGATAATGTTGTGTACCACTCATGTAGTGAAGATTTTCAAAAACTCAAGCATCTCCATGTCACAGGCAATGCCCAATTTACACATATCATTACTGAGGAGGTATGCCACTGGTGTCATTCTTTCCCATTTACACATATCATTAGTGAAGATTTATTTAATTTTTTTTATTCGAGGGATACGATTTACAAAGAAAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

727

Amino Acids

82.58

Weight (kDa)

5.44

Isoelectric Point (pI)

46.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 66 - 222 5.3e-23 NB-ARC domain
AAA_16 PF13191 67 - 118 7.4e-06 AAA ATPase domain
LRR_14 PF23598 493 - 591 6.7e-09 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 653
AasI GACNNNNNNGTC 1 cut(s) 531
Acc36I ACCTGC 1 cut(s) 653
AccB1I GGYRCC 1 cut(s) 1678
AccB7I CCANNNNNTGG 2 cut(s) 1285, 1775
AccBSI CCGCTC 1 cut(s) 592
AccII CGCG 2 cut(s) 598, 1387
AciI CCGC 6 cut(s) 80, 139, 592, 1036, 1584, 1695
AcoI YGGCCR 1 cut(s) 1190
AcsI RAATTY 5 cut(s) 106, 231, 325, 918, 1500
AcuI CTGAAG 3 cut(s) 1284, 1560, 1748
AfaI GTAC 5 cut(s) 131, 778, 1013, 1304, 1997
AfiI CCNNNNNNNGG 5 cut(s) 148, 253, 591, 1285, 1775
AflII CTTAAG 1 cut(s) 893
AflIII ACRYGT 1 cut(s) 1762
AjnI CCWGG 1 cut(s) 1330
Alw21I GWGCWC 3 cut(s) 39, 93, 451
Alw26I GTCTC 3 cut(s) 14, 647, 1458
AlwNI CAGNNNCTG 1 cut(s) 1775
AoxI GGCC 1 cut(s) 1190
ApeKI GCWGC 3 cut(s) 1399, 1587, 1748
ApoI RAATTY 5 cut(s) 106, 231, 325, 918, 1500
ArsI GACNNNNNNTTYG 2 cut(s) 1426, 1458
AseI ATTAAT 1 cut(s) 1829
Asp700I GAANNNNTTC 2 cut(s) 381, 2016
AspA2I CCTAGG 1 cut(s) 1253
AspLEI GCGC 1 cut(s) 1387
AspS9I GGNCC 2 cut(s) 370, 1915
AsuC2I CCSGG 1 cut(s) 32
AsuHPI GGTGA 3 cut(s) 677, 1325, 1602
AsuNHI GCTAGC 1 cut(s) 1712
AvaII GGWCC 2 cut(s) 370, 1915
AvrII CCTAGG 1 cut(s) 1253
AxyI CCTNAGG 1 cut(s) 305
BaeGI GKGCMC 1 cut(s) 1683
BalI TGGCCA 1 cut(s) 1192
BanI GGYRCC 1 cut(s) 1678
BanII GRGCYC 1 cut(s) 93
BbsI GAAGAC 4 cut(s) 287, 837, 1556, 1650
Bbv12I GWGCWC 3 cut(s) 39, 93, 451
BbvI GCAGC 3 cut(s) 1386, 1574, 1735
BccI CCATC 5 cut(s) 1133, 1163, 1414, 1668, 1961
BcgI CGANNNNNNTGC 2 cut(s) 171, 205
BciT130I CCWGG 1 cut(s) 1332
BciVI GTATCC 2 cut(s) 163, 2152
BcnI CCSGG 1 cut(s) 32
BcoDI GTCTC 3 cut(s) 14, 647, 1458
BfaI CTAG 9 cut(s) 50, 114, 812, 1254, 1475, 1496, 1640, 1713, 1925
BfrI CTTAAG 1 cut(s) 893
BfuAI ACCTGC 1 cut(s) 653
BfuI GTATCC 2 cut(s) 163, 2152
BisI GCNGC 4 cut(s) 1400, 1585, 1588, 1749
BlnI CCTAGG 1 cut(s) 1253
BlsI GCNGC 4 cut(s) 1401, 1586, 1589, 1750
BmcAI AGTACT 2 cut(s) 778, 1013
Bme1390I CCNGG 2 cut(s) 32, 1332
Bme18I GGWCC 2 cut(s) 370, 1915
BmgT120I GGNCC 2 cut(s) 370, 1915
BmiI GGNNCC 1 cut(s) 1680
BmrFI CCNGG 2 cut(s) 32, 1332
BmsI GCATC 5 cut(s) 787, 931, 1145, 1762, 2041
BmtI GCTAGC 1 cut(s) 1716
BoxI GACNNNNGTC 1 cut(s) 1920
BpiI GAAGAC 4 cut(s) 287, 837, 1556, 1650
BpmI CTGGAG 1 cut(s) 1307
BpuEI CTTGAG 3 cut(s) 823, 1669, 2012
BpuMI CCSGG 1 cut(s) 32
BsaAI YACGTR 1 cut(s) 1115
BsaJI CCNNGG 6 cut(s) 13, 156, 1077, 1253, 1330, 1918
BsaXI ACNNNNNCTCC 2 cut(s) 856, 886
Bsc4I CCNNNNNNNGG 5 cut(s) 148, 253, 591, 1285, 1775
Bse1I ACTGG 4 cut(s) 294, 1290, 1906, 2096
Bse21I CCTNAGG 1 cut(s) 305
Bse3DI GCAATG 2 cut(s) 1025, 2056
BseBI CCWGG 1 cut(s) 1332
BseDI CCNNGG 6 cut(s) 13, 156, 1077, 1253, 1330, 1918
BseGI GGATG 9 cut(s) 226, 560, 802, 886, 1248, 1453, 1679, 1870, 1972
BseLI CCNNNNNNNGG 5 cut(s) 148, 253, 591, 1285, 1775
BseMI GCAATG 2 cut(s) 1025, 2056
BseMII CTCAG 4 cut(s) 218, 600, 1519, 2067
BseNI ACTGG 4 cut(s) 294, 1290, 1906, 2096
BseRI GAGGAG 2 cut(s) 1361, 2093
BseSI GKGCMC 1 cut(s) 1683
BseXI GCAGC 3 cut(s) 1386, 1574, 1735
Bsh1236I CGCG 2 cut(s) 598, 1387
Bsh1285I CGRYCG 1 cut(s) 596
BshFI GGCC 1 cut(s) 1192
BshNI GGYRCC 1 cut(s) 1678
BsiEI CGRYCG 1 cut(s) 596
BsiHKAI GWGCWC 3 cut(s) 39, 93, 451
BsiSI CCGG 2 cut(s) 32, 368
BslI CCNNNNNNNGG 5 cut(s) 148, 253, 591, 1285, 1775
BsmAI GTCTC 3 cut(s) 14, 647, 1458
BsmBI CGTCTC 2 cut(s) 647, 1458
BsnI GGCC 1 cut(s) 1192
Bsp1286I GDGCHC 4 cut(s) 39, 93, 451, 1683
Bsp143I GATC 5 cut(s) 59, 883, 909, 1227, 1943
Bsp68I TCGCGA 1 cut(s) 598
BspACI CCGC 6 cut(s) 80, 139, 592, 1036, 1584, 1695
BspANI GGCC 1 cut(s) 1192
BspCNI CTCAG 4 cut(s) 219, 599, 1518, 2068
BspFNI CGCG 2 cut(s) 598, 1387
BspLI GGNNCC 1 cut(s) 1680
BspMI ACCTGC 1 cut(s) 653
BspOI GCTAGC 1 cut(s) 1716
BspQI GCTCTTC 1 cut(s) 1038
BspT107I GGYRCC 1 cut(s) 1678
BspTI CTTAAG 1 cut(s) 893
BsrBI CCGCTC 1 cut(s) 592
BsrDI GCAATG 2 cut(s) 1025, 2056
BsrI ACTGG 4 cut(s) 294, 1290, 1906, 2096
BssECI CCNNGG 6 cut(s) 13, 156, 1077, 1253, 1330, 1918
BssMI GATC 5 cut(s) 59, 883, 909, 1227, 1943
BssT1I CCWWGG 1 cut(s) 1253
Bst2UI CCWGG 1 cut(s) 1332
Bst4CI ACNGT 7 cut(s) 174, 205, 555, 697, 751, 872, 1919
Bst6I CTCTTC 3 cut(s) 1038, 1416, 1934
BstAFI CTTAAG 1 cut(s) 893
BstBAI YACGTR 1 cut(s) 1115
BstC8I GCNNGC 5 cut(s) 78, 312, 757, 1714, 1777
BstDEI CTNAG 6 cut(s) 227, 305, 586, 1160, 1505, 2076
BstDSI CCRYGG 3 cut(s) 13, 156, 1918
BstF5I GGATG 9 cut(s) 226, 560, 802, 886, 1248, 1453, 1679, 1870, 1972
BstFNI CGCG 2 cut(s) 598, 1387
BstHHI GCGC 1 cut(s) 1387
BstKTI GATC 5 cut(s) 62, 886, 912, 1230, 1946
BstMAI GTCTC 3 cut(s) 14, 647, 1458
BstMBI GATC 5 cut(s) 59, 883, 909, 1227, 1943
BstMCI CGRYCG 1 cut(s) 596
BstMWI GCNNNNNNNGC 1 cut(s) 851
BstNI CCWGG 1 cut(s) 1332
BstNSI RCATGY 1 cut(s) 1766
BstPAI GACNNNNGTC 1 cut(s) 1920
BstSCI CCNGG 2 cut(s) 30, 1330
BstSLI GKGCMC 1 cut(s) 1683
BstUI CGCG 2 cut(s) 598, 1387
BstV1I GCAGC 3 cut(s) 1386, 1574, 1735
BstV2I GAAGAC 4 cut(s) 287, 837, 1556, 1650
Bsu36I CCTNAGG 1 cut(s) 305
BsuI GTATCC 2 cut(s) 163, 2152
BsuRI GGCC 1 cut(s) 1192
BtgI CCRYGG 3 cut(s) 13, 156, 1918
BtsCI GGATG 9 cut(s) 226, 560, 802, 886, 1248, 1453, 1679, 1870, 1972
BtsIMutI CAGTG 4 cut(s) 287, 1011, 1800, 2089
BtuMI TCGCGA 1 cut(s) 598
BveI ACCTGC 1 cut(s) 653
Cac8I GCNNGC 5 cut(s) 78, 312, 757, 1714, 1777
CaiI CAGNNNCTG 1 cut(s) 1775
CfoI GCGC 1 cut(s) 1387
Cfr13I GGNCC 2 cut(s) 370, 1915
Csp6I GTAC 5 cut(s) 130, 777, 1012, 1303, 1996
CspCI CAANNNNNGTGG 4 cut(s) 274, 309, 703, 738
CviAII CATG 6 cut(s) 217, 1103, 1763, 1947, 2004, 2039
CviQI GTAC 5 cut(s) 130, 777, 1012, 1303, 1996
DdeI CTNAG 6 cut(s) 227, 305, 586, 1160, 1505, 2076
DpnI GATC 5 cut(s) 61, 885, 911, 1229, 1945
DpnII GATC 5 cut(s) 59, 883, 909, 1227, 1943
DraI TTTAAA 2 cut(s) 624, 1528
DrdI GACNNNNNNGTC 1 cut(s) 531
DseDI GACNNNNNNGTC 1 cut(s) 531
EaeI YGGCCR 1 cut(s) 1190
Eam1104I CTCTTC 3 cut(s) 1038, 1416, 1934
EarI CTCTTC 3 cut(s) 1038, 1416, 1934
EciI GGCGGA 1 cut(s) 128
Ecl136II GAGCTC 1 cut(s) 91
Eco130I CCWWGG 1 cut(s) 1253
Eco24I GRGCYC 1 cut(s) 93
Eco47I GGWCC 2 cut(s) 370, 1915
Eco53kI GAGCTC 1 cut(s) 91
Eco57I CTGAAG 3 cut(s) 1284, 1560, 1748
Eco81I CCTNAGG 1 cut(s) 305
EcoICRI GAGCTC 1 cut(s) 91
EcoRI GAATTC 1 cut(s) 231
EcoRII CCWGG 1 cut(s) 1330
EcoT14I CCWWGG 1 cut(s) 1253
EcoT22I ATGCAT 2 cut(s) 1027, 1104
EcoT38I GRGCYC 1 cut(s) 93
ErhI CCWWGG 1 cut(s) 1253
Esp3I CGTCTC 2 cut(s) 647, 1458
FaeI CATG 6 cut(s) 220, 1106, 1766, 1950, 2007, 2042
FalI AAGNNNNNCTT 4 cut(s) 288, 320, 785, 817
FatI CATG 6 cut(s) 216, 1102, 1762, 1946, 2003, 2038
Fnu4HI GCNGC 4 cut(s) 1400, 1585, 1588, 1749
FokI GGATG 9 cut(s) 233, 547, 809, 893, 1235, 1460, 1686, 1877, 1979
FriOI GRGCYC 1 cut(s) 93
Fsp4HI GCNGC 4 cut(s) 1400, 1585, 1588, 1749
FspBI CTAG 9 cut(s) 50, 114, 812, 1254, 1475, 1496, 1640, 1713, 1925
GlaI GCGC 1 cut(s) 1386
GluI GCNGC 4 cut(s) 1400, 1585, 1588, 1749
GsuI CTGGAG 1 cut(s) 1307
HaeIII GGCC 1 cut(s) 1192
HapII CCGG 2 cut(s) 32, 368
HhaI GCGC 1 cut(s) 1387
Hin1II CATG 6 cut(s) 220, 1106, 1766, 1950, 2007, 2042
Hin6I GCGC 1 cut(s) 1385
HinP1I GCGC 1 cut(s) 1385
HincII GTYRAC 1 cut(s) 558
HindII GTYRAC 1 cut(s) 558
HindIII AAGCTT 2 cut(s) 636, 890
HinfI GANTC 5 cut(s) 188, 1001, 1055, 1073, 1558
HpaII CCGG 2 cut(s) 32, 368
HphI GGTGA 3 cut(s) 677, 1325, 1602
Hpy166II GTNNAC 3 cut(s) 558, 1800, 1996
Hpy8I GTNNAC 3 cut(s) 558, 1800, 1996
Hpy99I CGWCG 1 cut(s) 1399
HpyAV CCTTC 5 cut(s) 371, 787, 1177, 1679, 1723
HpyCH4III ACNGT 7 cut(s) 174, 205, 555, 697, 751, 872, 1919
HpyCH4IV ACGT 4 cut(s) 1114, 1150, 1467, 1627
HpyCH4V TGCA 8 cut(s) 361, 514, 1025, 1030, 1102, 1136, 1221, 1751
HpyF10VI GCNNNNNNNGC 1 cut(s) 851
HpyF3I CTNAG 6 cut(s) 227, 305, 586, 1160, 1505, 2076
HpySE526I ACGT 4 cut(s) 1114, 1150, 1467, 1627
Hsp92II CATG 6 cut(s) 220, 1106, 1766, 1950, 2007, 2042
HspAI GCGC 1 cut(s) 1385
Kzo9I GATC 5 cut(s) 59, 883, 909, 1227, 1943
LguI GCTCTTC 1 cut(s) 1038
LmnI GCTCC 3 cut(s) 42, 73, 1979
Lsp1109I GCAGC 3 cut(s) 1386, 1574, 1735
LweI GCATC 5 cut(s) 787, 931, 1145, 1762, 2041
MaeI CTAG 9 cut(s) 50, 114, 812, 1254, 1475, 1496, 1640, 1713, 1925
MaeII ACGT 4 cut(s) 1114, 1150, 1467, 1627
MaeIII GTNAC 9 cut(s) 41, 461, 745, 866, 1065, 1110, 1313, 1334, 2041
MalI GATC 5 cut(s) 61, 885, 911, 1229, 1945
MbiI CCGCTC 1 cut(s) 592
MboI GATC 5 cut(s) 59, 883, 909, 1227, 1943
MfeI CAATTG 2 cut(s) 875, 972
MhlI GDGCHC 4 cut(s) 39, 93, 451, 1683
MlsI TGGCCA 1 cut(s) 1192
MluNI TGGCCA 1 cut(s) 1192
MlyI GAGTC 2 cut(s) 1067, 1552
MmeI TCCRAC 4 cut(s) 51, 502, 1459, 1811
Mox20I TGGCCA 1 cut(s) 1192
Mph1103I ATGCAT 2 cut(s) 1027, 1104
MroXI GAANNNNTTC 2 cut(s) 381, 2016
MscI TGGCCA 1 cut(s) 1192
MslI CAYNNNNRTG 2 cut(s) 459, 2037
Msp20I TGGCCA 1 cut(s) 1192
MspCI CTTAAG 1 cut(s) 893
MspI CCGG 2 cut(s) 32, 368
MspR9I CCNGG 2 cut(s) 32, 1332
MunI CAATTG 2 cut(s) 875, 972
MvaI CCWGG 1 cut(s) 1332
MvnI CGCG 2 cut(s) 598, 1387
MwoI GCNNNNNNNGC 1 cut(s) 851
NciI CCSGG 1 cut(s) 32
NdeII GATC 5 cut(s) 59, 883, 909, 1227, 1943
NheI GCTAGC 1 cut(s) 1712
NlaIII CATG 6 cut(s) 220, 1106, 1766, 1950, 2007, 2042
NlaIV GGNNCC 1 cut(s) 1680
NmeAIII GCCGAG 1 cut(s) 830
NmuCI GTSAC 4 cut(s) 461, 745, 1313, 2041
NruI TCGCGA 1 cut(s) 598
NsiI ATGCAT 2 cut(s) 1027, 1104
NspI RCATGY 1 cut(s) 1766
PaqCI CACCTGC 1 cut(s) 653
PciI ACATGT 1 cut(s) 1762
PciSI GCTCTTC 1 cut(s) 1038
PcsI WCGNNNNNNNCGW 1 cut(s) 2159
PdmI GAANNNNTTC 2 cut(s) 381, 2016
PfeI GAWTC 3 cut(s) 188, 1001, 1055
PflMI CCANNNNNTGG 2 cut(s) 1285, 1775
PkrI GCNGC 4 cut(s) 1401, 1586, 1589, 1750
PleI GAGTC 2 cut(s) 1067, 1552
PpsI GAGTC 2 cut(s) 1067, 1552
Ppu21I YACGTR 1 cut(s) 1115
PscI ACATGT 1 cut(s) 1762
PshAI GACNNNNGTC 1 cut(s) 1920
PshBI ATTAAT 1 cut(s) 1829
Psp124BI GAGCTC 1 cut(s) 93
Psp6I CCWGG 1 cut(s) 1330
PspGI CCWGG 1 cut(s) 1330
PspN4I GGNNCC 1 cut(s) 1680
PspPI GGNCC 2 cut(s) 370, 1915
PstNI CAGNNNCTG 1 cut(s) 1775
RruI TCGCGA 1 cut(s) 598
RsaI GTAC 5 cut(s) 131, 778, 1013, 1304, 1997
RsaNI GTAC 5 cut(s) 130, 777, 1012, 1303, 1996
RseI CAYNNNNRTG 2 cut(s) 459, 2037
SacI GAGCTC 1 cut(s) 93
SapI GCTCTTC 1 cut(s) 1038
SatI GCNGC 4 cut(s) 1400, 1585, 1588, 1749
Sau3AI GATC 5 cut(s) 59, 883, 909, 1227, 1943
Sau96I GGNCC 2 cut(s) 370, 1915
ScaI AGTACT 2 cut(s) 778, 1013
SchI GAGTC 2 cut(s) 1067, 1552
ScrFI CCNGG 2 cut(s) 32, 1332
SduI GDGCHC 4 cut(s) 39, 93, 451, 1683
SfaNI GCATC 5 cut(s) 787, 931, 1145, 1762, 2041
SinI GGWCC 2 cut(s) 370, 1915
SmiMI CAYNNNNRTG 2 cut(s) 459, 2037
SmlI CTYRAG 4 cut(s) 802, 893, 1648, 2027
SmoI CTYRAG 4 cut(s) 802, 893, 1648, 2027
SsiI CCGC 6 cut(s) 80, 139, 592, 1036, 1584, 1695
SspI AATATT 1 cut(s) 1827
SspMI CTAG 9 cut(s) 50, 114, 812, 1254, 1475, 1496, 1640, 1713, 1925
SstI GAGCTC 1 cut(s) 93
StyD4I CCNGG 2 cut(s) 30, 1330
StyI CCWWGG 1 cut(s) 1253
TaaI ACNGT 7 cut(s) 174, 205, 555, 697, 751, 872, 1919
TaiI ACGT 4 cut(s) 1117, 1153, 1470, 1630
TatI WGTACW 3 cut(s) 776, 1011, 1302
TauI GCSGC 1 cut(s) 1587
TfiI GAWTC 3 cut(s) 188, 1001, 1055
TscAI CASTG 4 cut(s) 294, 1011, 1807, 2096
TseFI GTSAC 4 cut(s) 461, 745, 1313, 2041
TseI GCWGC 3 cut(s) 1399, 1587, 1748
Tsp45I GTSAC 4 cut(s) 461, 745, 1313, 2041
TspDTI ATGAA 6 cut(s) 237, 1286, 1367, 1403, 1670, 1881
TspGWI ACGGA 4 cut(s) 29, 145, 1686, 1992
TspRI CASTG 4 cut(s) 294, 1011, 1807, 2096
Van91I CCANNNNNTGG 2 cut(s) 1285, 1775
Vha464I CTTAAG 1 cut(s) 893
VpaK11BI GGWCC 2 cut(s) 370, 1915
VspI ATTAAT 1 cut(s) 1829
XapI RAATTY 5 cut(s) 106, 231, 325, 918, 1500
XbaI TCTAGA 2 cut(s) 1639, 1924
XceI RCATGY 1 cut(s) 1766
XmaJI CCTAGG 1 cut(s) 1253
XmnI GAANNNNTTC 2 cut(s) 381, 2016
XspI CTAG 9 cut(s) 50, 114, 812, 1254, 1475, 1496, 1640, 1713, 1925
ZrmI AGTACT 2 cut(s) 778, 1013
Zsp2I ATGCAT 2 cut(s) 1027, 1104
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.