Rroxscaffold_5G00341150

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
Physical Location & Seq
Forward (+)
9656273 .. 9659965
3693 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00341150.1

Sequence Viewer

Length: 1440 bp
ATGATCAAGATAGTTGCAAGCAATGGAAACGATAATTCAGGAAATGAGATTGAGTTCAGGGTGTTGAAATATTTGGAACTTTCTGCTCTACCAAGTCTGAGAGGCTTTTGCTCGGAAGCTCGCATTGTCAAATTCCCATCCTGGGAAAAATTATCTGTGACTAGTTGTGCTCAACTGGAGACGTTCATCATTGATACTATGGATAGTACAATTGGCAAGGACATCAAAGCCACCGACTCAAACGAATACATAATTGAGACTGGAGTGGTGCAACAATTCCTTTTTGACAACAAGATTGAATTTCCGAGGTTGAAGAGTTTGTCTCCCAAGGGTCTAACAAAGTGCAAGTCAGTACAAGTTGTATTTGAACTTGGAGGAATTGATGCTGTAGAAGAACAGGACACATCAGCAGTCACTCCGTCGAAACCTTTTGATTGTGAAAATCTAAACTCGGTAGAGATTGATTCCTCCATGCAGGCTTCAACTTGGCCAGCACTTCAAAAATTGGTGGTGGTTGGATGTTACAAATTGGAGATCTTCTCTGAGGCACTTTCAAGCTTTCAAGGGAAATGTGAATCAAACCTGTCCACTCCAATTAAACAAACTCTCTTTTCAATTGAGAAGGATTCATTCGCCAACTTGGAAGACTTGACTTTATGCAGCATGGAGATTTGGAATGGTCCACTTCCGGTCCACTTCTTTGGAAAACTAAAATCTCTTGCAGTTTGTTGTCCAAAGTCCAAGTCAGTTGTTTTTCTTGACAAATTACTAGATGAAGGAAACTCTAGTACTCGTACTAGGAAAAGGGATGATGCCGTTGAGATTGGGTCGACCCTCCCACATTTAAGACTGTTGGAACTTCGTTTAATGCCCAACCTGATGCATCTTGGCGAGGATAACTCACAATCAGCCCCCCGCATCCCAAATTTTCCAAATCTGGAAATTCTACTGCTGGGTGCTTGTGACAGCTTACAGAATCTAACCTCATCTGCAATATCCTTCAAGAATCTGACAACTTTGGAAGTACGTAATTGCAAGGGATTGAAGTACTTGCTAACTTACTCCGTGGCCAAAGGTTTAATACAGCTGACAAAACTGGAAGTTGAGAATTGCAAGAGACTTGTAAGTATAGTGGGAAGCACCGAAGAAGACGAGTTGGGAAATAATAATGAGATTATATTCAGGCGGCTGAAACATTTGAAACTTTCTTTTCTACCAAGACTGCGAGGCTTTTGCTCCGGAAATTGCATTGCTAAACTCCCAGCCTTGGAAACTTTATCCATCAGCAACCGTCTCAAATTGAAGATTTTCCCGGCTCAAGACGTATCGCTACAGACAACAAACGAGGAGGAAGACACAGATGTCGATGCCTGCCTGCCTGGGGCGAAGCTGACTGCTGAGGATGAAATGAATTTGGCAAGCACTGATTTGATATCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

479

Amino Acids

53.04

Weight (kDa)

5.19

Isoelectric Point (pI)

39.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_RPS2 PF23247 199 - 330 1.7e-06 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 331 - 372 9.6e-11 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1361
AccI GTMKAC 1 cut(s) 830
AccIII TCCGGA 1 cut(s) 1238
AciI CCGC 2 cut(s) 916, 1186
AcoI YGGCCR 2 cut(s) 488, 1068
AcsI RAATTY 5 cut(s) 131, 299, 925, 942, 1411
AfaI GTAC 6 cut(s) 208, 354, 790, 796, 1026, 1049
AfiI CCNNNNNNNGG 3 cut(s) 142, 1267, 1381
AhlI ACTAGT 1 cut(s) 161
AjnI CCWGG 2 cut(s) 140, 1378
AluBI AGCT 5 cut(s) 119, 558, 969, 1087, 1390
AluI AGCT 5 cut(s) 119, 558, 969, 1087, 1390
Alw21I GWGCWC 1 cut(s) 172
Alw26I GTCTC 5 cut(s) 173, 251, 327, 1111, 1298
Aor13HI TCCGGA 1 cut(s) 1238
AoxI GGCC 2 cut(s) 488, 1068
ApeKI GCWGC 1 cut(s) 660
ApoI RAATTY 5 cut(s) 131, 299, 925, 942, 1411
ArsI GACNNNNNNTTYG 4 cut(s) 332, 364, 728, 760
Asp700I GAANNNNTTC 1 cut(s) 1307
AspS9I GGNCC 2 cut(s) 680, 691
AsuC2I CCSGG 1 cut(s) 1313
AvaII GGWCC 2 cut(s) 680, 691
BalI TGGCCA 2 cut(s) 490, 1070
BbsI GAAGAC 3 cut(s) 651, 1155, 1359
Bbv12I GWGCWC 1 cut(s) 172
BbvCI CCTCAGC 1 cut(s) 1398
BbvI GCAGC 1 cut(s) 672
BccI CCATC 2 cut(s) 145, 1289
BceAI ACGGC 1 cut(s) 800
BcgI CGANNNNNNTGC 2 cut(s) 1215, 1249
BciT130I CCWGG 2 cut(s) 142, 1380
BclI TGATCA 1 cut(s) 3
BcnI CCSGG 1 cut(s) 1313
BcoDI GTCTC 5 cut(s) 173, 251, 327, 1111, 1298
BcuI ACTAGT 1 cut(s) 161
BfaI CTAG 4 cut(s) 162, 770, 786, 798
BfmI CTRYAG 2 cut(s) 387, 1331
BglII AGATCT 1 cut(s) 534
BisI GCNGC 2 cut(s) 661, 1187
BlsI GCNGC 2 cut(s) 662, 1188
BmcAI AGTACT 2 cut(s) 790, 1049
Bme1390I CCNGG 3 cut(s) 142, 1313, 1380
Bme18I GGWCC 2 cut(s) 680, 691
BmgT120I GGNCC 2 cut(s) 680, 691
BmrFI CCNGG 3 cut(s) 142, 1313, 1380
BmsI GCATC 6 cut(s) 373, 802, 870, 892, 927, 1357
BpiI GAAGAC 3 cut(s) 651, 1155, 1359
BplI GAGNNNNNCTC 6 cut(s) 307, 339, 524, 556, 884, 916
BpmI CTGGAG 2 cut(s) 197, 282
Bpu10I CCTNAGC 1 cut(s) 1398
BpuEI CTTGAG 1 cut(s) 1302
BpuMI CCSGG 1 cut(s) 1313
BsaAI YACGTR 1 cut(s) 1028
BsaJI CCNNGG 6 cut(s) 141, 305, 327, 1065, 1266, 1379
BsaWI WCCGGW 2 cut(s) 688, 1238
Bsc4I CCNNNNNNNGG 3 cut(s) 142, 1267, 1381
Bse1I ACTGG 3 cut(s) 180, 265, 1101
Bse3DI GCAATG 2 cut(s) 28, 1248
BseAI TCCGGA 1 cut(s) 1238
BseBI CCWGG 2 cut(s) 142, 1380
BseDI CCNNGG 6 cut(s) 141, 305, 327, 1065, 1266, 1379
BseGI GGATG 5 cut(s) 137, 524, 814, 918, 1408
BseLI CCNNNNNNNGG 3 cut(s) 142, 1267, 1381
BseMI GCAATG 2 cut(s) 28, 1248
BseMII CTCAG 3 cut(s) 89, 534, 1389
BseNI ACTGG 3 cut(s) 180, 265, 1101
BseRI GAGGAG 1 cut(s) 1361
BseXI GCAGC 1 cut(s) 672
BseYI CCCAGC 2 cut(s) 952, 1261
BshFI GGCC 2 cut(s) 490, 1070
BsiHKAI GWGCWC 1 cut(s) 172
BsiSI CCGG 3 cut(s) 689, 1239, 1313
BslI CCNNNNNNNGG 3 cut(s) 142, 1267, 1381
BsmAI GTCTC 5 cut(s) 173, 251, 327, 1111, 1298
BsmBI CGTCTC 2 cut(s) 173, 1298
BsnI GGCC 2 cut(s) 490, 1070
Bsp1286I GDGCHC 1 cut(s) 172
Bsp13I TCCGGA 1 cut(s) 1238
Bsp143I GATC 2 cut(s) 3, 534
BspACI CCGC 2 cut(s) 916, 1186
BspANI GGCC 2 cut(s) 490, 1070
BspCNI CTCAG 3 cut(s) 90, 535, 1390
BspEI TCCGGA 1 cut(s) 1238
BsrDI GCAATG 2 cut(s) 28, 1248
BsrI ACTGG 3 cut(s) 180, 265, 1101
BssECI CCNNGG 6 cut(s) 141, 305, 327, 1065, 1266, 1379
BssMI GATC 2 cut(s) 3, 534
BssT1I CCWWGG 2 cut(s) 327, 1266
Bst2UI CCWGG 2 cut(s) 142, 1380
Bst4CI ACNGT 2 cut(s) 852, 1292
Bst6I CTCTTC 1 cut(s) 308
BstBAI YACGTR 1 cut(s) 1028
BstC8I GCNNGC 7 cut(s) 19, 121, 477, 492, 1372, 1376, 1420
BstDEI CTNAG 3 cut(s) 98, 543, 1398
BstDSI CCRYGG 1 cut(s) 1065
BstF5I GGATG 5 cut(s) 137, 524, 814, 918, 1408
BstKTI GATC 2 cut(s) 6, 537
BstMAI GTCTC 5 cut(s) 173, 251, 327, 1111, 1298
BstMBI GATC 2 cut(s) 3, 534
BstNI CCWGG 2 cut(s) 142, 1380
BstSCI CCNGG 3 cut(s) 140, 1311, 1378
BstSFI CTRYAG 2 cut(s) 387, 1331
BstSNI TACGTA 1 cut(s) 1028
BstV1I GCAGC 1 cut(s) 672
BstV2I GAAGAC 3 cut(s) 651, 1155, 1359
BstX2I RGATCY 1 cut(s) 534
BstXI CCANNNNNNTGG 1 cut(s) 701
BstYI RGATCY 1 cut(s) 534
BsuRI GGCC 2 cut(s) 490, 1070
BtgI CCRYGG 1 cut(s) 1065
BtsCI GGATG 5 cut(s) 137, 524, 814, 918, 1408
BtsIMutI CAGTG 1 cut(s) 1422
Cac8I GCNNGC 7 cut(s) 19, 121, 477, 492, 1372, 1376, 1420
Cfr13I GGNCC 2 cut(s) 680, 691
Csp6I GTAC 6 cut(s) 207, 353, 789, 795, 1025, 1048
CviAII CATG 2 cut(s) 472, 664
CviQI GTAC 6 cut(s) 207, 353, 789, 795, 1025, 1048
DdeI CTNAG 3 cut(s) 98, 543, 1398
DpnI GATC 2 cut(s) 5, 536
DpnII GATC 2 cut(s) 3, 534
DrdI GACNNNNNNGTC 1 cut(s) 1361
DseDI GACNNNNNNGTC 1 cut(s) 1361
EaeI YGGCCR 2 cut(s) 488, 1068
Eam1104I CTCTTC 1 cut(s) 308
EarI CTCTTC 1 cut(s) 308
Eco105I TACGTA 1 cut(s) 1028
Eco130I CCWWGG 2 cut(s) 327, 1266
Eco32I GATATC 1 cut(s) 1434
Eco47I GGWCC 2 cut(s) 680, 691
EcoRII CCWGG 2 cut(s) 140, 1378
EcoRV GATATC 1 cut(s) 1434
EcoT14I CCWWGG 2 cut(s) 327, 1266
EcoT22I ATGCAT 1 cut(s) 885
ErhI CCWWGG 2 cut(s) 327, 1266
Esp3I CGTCTC 2 cut(s) 173, 1298
FaeI CATG 2 cut(s) 475, 667
FaiI YATR 7 cut(s) 200, 251, 473, 658, 665, 1130, 1178
FatI CATG 2 cut(s) 471, 663
FauI CCCGC 1 cut(s) 923
FbaI TGATCA 1 cut(s) 3
FblI GTMKAC 1 cut(s) 830
Fnu4HI GCNGC 2 cut(s) 661, 1187
FokI GGATG 5 cut(s) 124, 531, 821, 905, 1415
Fsp4HI GCNGC 2 cut(s) 661, 1187
FspBI CTAG 4 cut(s) 162, 770, 786, 798
GluI GCNGC 2 cut(s) 661, 1187
GsaI CCCAGC 2 cut(s) 956, 1265
GsuI CTGGAG 2 cut(s) 197, 282
HaeIII GGCC 2 cut(s) 490, 1070
HapII CCGG 3 cut(s) 689, 1239, 1313
Hin1II CATG 2 cut(s) 475, 667
HincII GTYRAC 1 cut(s) 831
HindII GTYRAC 1 cut(s) 831
HindIII AAGCTT 1 cut(s) 556
HinfI GANTC 6 cut(s) 236, 464, 575, 626, 976, 1006
HpaII CCGG 3 cut(s) 689, 1239, 1313
Hpy166II GTNNAC 4 cut(s) 588, 683, 694, 831
Hpy188I TCNGA 5 cut(s) 99, 115, 306, 544, 1011
Hpy188III TCNNGA 7 cut(s) 7, 39, 758, 938, 1003, 1239, 1319
Hpy8I GTNNAC 4 cut(s) 588, 683, 694, 831
Hpy99I CGWCG 1 cut(s) 424
HpyAV CCTTC 3 cut(s) 616, 770, 1009
HpyCH4III ACNGT 2 cut(s) 852, 1292
HpyCH4IV ACGT 3 cut(s) 182, 1027, 1323
HpyF3I CTNAG 3 cut(s) 98, 543, 1398
HpySE526I ACGT 3 cut(s) 182, 1027, 1323
Hsp92II CATG 2 cut(s) 475, 667
Kpn2I TCCGGA 1 cut(s) 1238
Ksp22I TGATCA 1 cut(s) 3
Kzo9I GATC 2 cut(s) 3, 534
LmnI GCTCC 1 cut(s) 1241
Lsp1109I GCAGC 1 cut(s) 672
LweI GCATC 6 cut(s) 373, 802, 870, 892, 927, 1357
MaeI CTAG 4 cut(s) 162, 770, 786, 798
MaeII ACGT 3 cut(s) 182, 1027, 1323
MaeIII GTNAC 4 cut(s) 157, 412, 521, 962
MalI GATC 2 cut(s) 5, 536
MboI GATC 2 cut(s) 3, 534
MboII GAAGA 8 cut(s) 325, 404, 529, 656, 1157, 1160, 1315, 1364
MfeI CAATTG 2 cut(s) 210, 615
MflI RGATCY 1 cut(s) 534
MhlI GDGCHC 1 cut(s) 172
MlsI TGGCCA 2 cut(s) 490, 1070
MluNI TGGCCA 2 cut(s) 490, 1070
MlyI GAGTC 1 cut(s) 230
MmeI TCCRAC 2 cut(s) 496, 834
Mox20I TGGCCA 2 cut(s) 490, 1070
Mph1103I ATGCAT 1 cut(s) 885
MroI TCCGGA 1 cut(s) 1238
MroXI GAANNNNTTC 1 cut(s) 1307
MscI TGGCCA 2 cut(s) 490, 1070
MseI TTAA 5 cut(s) 597, 845, 866, 1079, 1438
Msp20I TGGCCA 2 cut(s) 490, 1070
MspA1I CMGCKG 1 cut(s) 1087
MspI CCGG 3 cut(s) 689, 1239, 1313
MspR9I CCNGG 3 cut(s) 142, 1313, 1380
MunI CAATTG 2 cut(s) 210, 615
MvaI CCWGG 2 cut(s) 142, 1380
NciI CCSGG 1 cut(s) 1313
NdeII GATC 2 cut(s) 3, 534
NlaIII CATG 2 cut(s) 475, 667
NmuCI GTSAC 3 cut(s) 157, 412, 962
NsiI ATGCAT 1 cut(s) 885
PdmI GAANNNNTTC 1 cut(s) 1307
PfeI GAWTC 5 cut(s) 464, 575, 626, 976, 1006
PkrI GCNGC 2 cut(s) 662, 1188
PleI GAGTC 1 cut(s) 230
PpsI GAGTC 1 cut(s) 230
Ppu21I YACGTR 1 cut(s) 1028
Psp6I CCWGG 2 cut(s) 140, 1378
PspFI CCCAGC 2 cut(s) 952, 1261
PspGI CCWGG 2 cut(s) 140, 1378
PspPI GGNCC 2 cut(s) 680, 691
PsuI RGATCY 1 cut(s) 534
PvuII CAGCTG 1 cut(s) 1087
RsaI GTAC 6 cut(s) 208, 354, 790, 796, 1026, 1049
RsaNI GTAC 6 cut(s) 207, 353, 789, 795, 1025, 1048
SalI GTCGAC 1 cut(s) 829
SaqAI TTAA 5 cut(s) 597, 845, 866, 1079, 1438
SatI GCNGC 2 cut(s) 661, 1187
Sau3AI GATC 2 cut(s) 3, 534
Sau96I GGNCC 2 cut(s) 680, 691
ScaI AGTACT 2 cut(s) 790, 1049
SchI GAGTC 1 cut(s) 230
ScrFI CCNGG 3 cut(s) 142, 1313, 1380
SduI GDGCHC 1 cut(s) 172
SfaNI GCATC 6 cut(s) 373, 802, 870, 892, 927, 1357
SfcI CTRYAG 2 cut(s) 387, 1331
SinI GGWCC 2 cut(s) 680, 691
SmlI CTYRAG 1 cut(s) 1317
SmoI CTYRAG 1 cut(s) 1317
SnaBI TACGTA 1 cut(s) 1028
SpeI ACTAGT 1 cut(s) 161
SsiI CCGC 2 cut(s) 916, 1186
SspI AATATT 1 cut(s) 71
SspMI CTAG 4 cut(s) 162, 770, 786, 798
StyD4I CCNGG 3 cut(s) 140, 1311, 1378
StyI CCWWGG 2 cut(s) 327, 1266
TaaI ACNGT 2 cut(s) 852, 1292
TaiI ACGT 3 cut(s) 185, 1030, 1326
TaqI TCGA 3 cut(s) 422, 830, 1365
TatI WGTACW 4 cut(s) 206, 352, 788, 1047
TauI GCSGC 1 cut(s) 1189
TfiI GAWTC 5 cut(s) 464, 575, 626, 976, 1006
Tru1I TTAA 5 cut(s) 597, 845, 866, 1079, 1438
Tru9I TTAA 5 cut(s) 597, 845, 866, 1079, 1438
TscAI CASTG 1 cut(s) 1429
TseFI GTSAC 3 cut(s) 157, 412, 962
TseI GCWGC 1 cut(s) 660
Tsp45I GTSAC 3 cut(s) 157, 412, 962
TspDTI ATGAA 5 cut(s) 175, 618, 789, 1419, 1424
TspGWI ACGGA 2 cut(s) 408, 1054
TspRI CASTG 1 cut(s) 1429
VpaK11BI GGWCC 2 cut(s) 680, 691
XapI RAATTY 5 cut(s) 131, 299, 925, 942, 1411
XmiI GTMKAC 1 cut(s) 830
XmnI GAANNNNTTC 1 cut(s) 1307
XspI CTAG 4 cut(s) 162, 770, 786, 798
ZrmI AGTACT 2 cut(s) 790, 1049
Zsp2I ATGCAT 1 cut(s) 885
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.