Rmu_sc0004595.1_g000015

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004595.1
Physical Location & Seq
Forward (+)
69346 .. 76161
6816 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004595.1_g000015.1.cds

Sequence Viewer

Length: 4338 bp
atggattgtctttgtgcaattggtaatgccgttgttggaaaaatagccgagtacacggttgaacccttcggacgcctagtgggacgtcaagtgggttatctaatccattacaacaagaatattcaaaatctaaggactcaagtgaagaatttgagcgtcgccagagatagagtaaagcaacaggttgataaagctgatagaaaaggtgagaatatccataatgatgtccaaaaatggctcgatgaagtggctcaggtcattaaagacacagaagaattcttgaagggaaaatgccaagcaactggagagccaaacgaagtcatgaaggatgaacatcaagcaaagatgaagcgtccccatcaagtttgtcctaatccgagacttcgttatcaactaagcaggaagtcaacaaagttggtggaggctgtggatgaactctataaaagaaaagacttctctattgtttcatacagtgttcacccacaagagtgcggcagtgccgacatgattcttgtgtatggtattggtggtgtgggtaaaaccacactggtggaagaagttctcaggcaagttacgaaagataagttgtttgatgacgcagtcatggtacgagatgtgaaaattccaaacttggaagcaattcaaaaggaaattgctgaaaagttaggtcctggagttttgtcaaaccagactgtccccggaagagccaatgaaatatgtgaaagaataaaagacaagaagactcttgtggttttggatgatgtctgggaagaaattgacttgaagactctcgggcttccccacatacctacttgtaaaatagtgctgacctctagaattcgaaaggtattatcttctgataagattaagcagaaagtgtttctgcttggagcgttaggcgaaaatgaaacttggcttttatttgagaagaaagtaggtgatgttattaaagatcccactatactaagcatagcaactcaagtcgccaaaaaatgtggaggtttacctgttttgattgtcacagttgcaagcgctttagaaaatagttctttacatatatggaaaaatgccctgagaagtcttgacaggtttcatgagaaagaagaactgacagaaaaagcttacatgggtcttgaatggagttacactcaattgaatgagcagcttaagccattattcctgttgtgtggcgccactatacaagggaactctatttctttgacgaacttgttgaaatatagtatgggtttgggtttttttaaagaccatacagtggaagaagctcgaaatgcgttgtatacacaggttgataaacttaagaattcttgtctattgctagacggagatgacaatacatgtgtcagaatgcatgatcttgtacatgatgttgctatctggattgcgaccagagatcaacacgtccaagtgaaagatggagttgatctgatagaatggccagatcaagattcgtttaaaaggtgcagtaagatctcctggtcctgttgcaatatccccagtcttcctgaaataccttggaaatgtcccgagctggaaatgtttcgtctgcatggtaatggtgaaaaaaatgaccacaattcgaatattccaaggaatttttttggagaaatgccaaaactcaaggtgttggatatttgcaatctgcctcttatgttactacctccatctcttcaatcgctaaaaaccaatcttcaaacattgtgtttagatggatgcacattggaagacatagctctagttggagagctaggcaacttggaaactcttagctttgctaactccaaggtcaaagagttgccgaaagaaatagcgaaattgactcatctgcggttgttggacttgtcggattgccctgagcttgaagtgatttcgcctaatgtcatatcaagtttgacaaggctcgaagacttgagaatgataaacagttttgaaaaatgggaggctgaggaagacatcaacaaaagaaggaatgctagtcttttagagctgaagaacttatcgcaattaacggcatcagaaatatatattccagatgctgatattcttccaccaaacttgttttgcaatgaattggaaagataccatatatatattggtggtatgtggtcgaaacgtaaggctgaaacaaccttcaatacactaaagctcaagctcactcccagcaatcaatcggatcaaggtctaagaaggctgatgatgagatctgaagatttgggcttggatgtgacggaaggtattaataatagtttgtatcaattagacaacaaaggttttctgcacctgaaacgcctcctactccaaaacaatgttgatctttcatatttcaatgacaagaaggttgtgttccccaacttaactaccttgagcatacaaaaatgtggtcatttgagattcttgttctcatgttctatggctgaaagtttcgtacagctcaaacatcttgagatacgcaactgcaacagcatggaagaggtagtatcatcaacaacagattacaatgaagaaaatatgaatgacatgttctgtaagcttgaaactctggaactggaacgacttccatgcctcggtagaatctgcacaggaactcgtattgaatttccgtccttgaagaagttggttatacggaattgtgaaaaaatgaaggcattcatctgtgaccctgtgagtgataaaagtacaagaatctgcaaagaaattgaagagagggagtcagaggagagcccaagtgttgaacattcgagtgttgcagaacgctgcctttttaacgacagggtaagatttcctagcttggagaaattgatgatttggtcattagacgagttgcagagtatatggcacaataaccaacttgctgatcaagactgtttttgccgactcaaacaagttcacgttattaattgcaaaagtctgataagtgtatttccgcctagtatcatggggagattgaatgctctgaaaagattagagatatcatcgggcggctcgctaaaagtggtatttgaagtcggaggaattaatgttgaagagacacgtgtcaacacatcatcccgttatgatcagttgacacctttgtactgtcaaaatcttgaaatcttgtacatatgcggtgctgacagtttgaaaaatatattcccagcctctttggccagaggacttcagcagctacgatatctgagcgtgacgtcttgtcgtgatctgctggaaatagttggtgaggaagagggaggagtagaattaccaacgcctcctcagtttgtgttcccaaaggcaacaagagtggataaacatgagtcgggcccagtaaagtctatctttccaattaacaaggattcattccccaacttggaaaacttgcccgtgtacaacatggatatttggtacggtacatccccagtaccaacagagtcgttcagcaacctaaaatatattgaattttattattgggcacctttctcccagcaagctacatcactcttccttcagcaattacacaatattgaaggaattgaggtgactggggctcctcccgaagaaacatttgtcagtgaaggaaacactagttgtgaggaaatacatgcagttgcgaccctaccaagcatacgaattttaaagtttgactgttgcaaaatgttgcatctagggaaggagaactccggatcaggaggcccaatttttccgaacttggaagttctagaggtgtcggaacattctcccggattaaagaatttggagtcatcagcgatctccttccggaatttaaaaactttgaaagtagttgattgtccgggcttggaacatttaataacttactcagtggctaaaagcttaatgcaactgacaacaatgaaagtgagggactgtccaagaattgcagtcatagtgacaacagacggtgatgatgcagcagaagagattaccttcagccgattgcaagttttaacccttcgtggactgccaaaaatgcaaggcttttgctccggaagttgcattgtgaatctcccatccttgactactttaaccataagcaaccgccttaaattgaagattttccaagaaaagctaaagataacaagcaagcactctgacacggaggaggaggaggaagacaatgtggaggaggaaatagtgagcctgcacgctgctgcctcaaggagggcagtacagaaggcccacccggtttcagtggaaggacgctctactacttgtttgagaaatggaggactctactttcggccctcggggttgtctatcagctctgatgttgtggtgttgaagttggagtctctaccttgtcgagctaccaaatccaaggcgttttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1445

Amino Acids

163.04

Weight (kDa)

6.04

Isoelectric Point (pI)

43.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 88, 3203
AccB1I GGYRCC 2 cut(s) 1190, 3463
AccB7I CCANNNNNTGG 1 cut(s) 1273
AccI GTMKAC 1 cut(s) 1298
AccIII TCCGGA 3 cut(s) 3671, 3768, 3995
AciI CCGC 6 cut(s) 492, 1846, 2942, 2997, 3123, 4048
AclWI GGATC 3 cut(s) 947, 2199, 3682
AcoI YGGCCR 2 cut(s) 1454, 3162
AcuI CTGAAG 5 cut(s) 2027, 2244, 3158, 3482, 3922
AcvI CACGTG 1 cut(s) 3050
AcyI GRCGYC 4 cut(s) 73, 85, 1191, 3200
AfeI AGCGCT 1 cut(s) 1033
AfiI CCNNNNNNNGG 4 cut(s) 1273, 2582, 3361, 4170
AflII CTTAAG 2 cut(s) 1166, 1316
AflIII ACRYGT 5 cut(s) 1355, 1417, 2535, 3047, 3049
AhdI GACNNNNNGTC 1 cut(s) 3204
AhlI ACTAGT 1 cut(s) 3575
AjiI CACGTC 1 cut(s) 1420
AjnI CCWGG 2 cut(s) 670, 1493
AleI CACNNNNGTG 2 cut(s) 487, 548
Alw26I GTCTC 3 cut(s) 373, 3038, 4305
AlwI GGATC 3 cut(s) 947, 2199, 3682
AlwNI CAGNNNCTG 1 cut(s) 2054
Ama87I CYCGRG 3 cut(s) 791, 1544, 4255
Aor13HI TCCGGA 3 cut(s) 3671, 3768, 3995
Aor51HI AGCGCT 1 cut(s) 1033
AoxI GGCC 6 cut(s) 1454, 3162, 3313, 3682, 4185, 4250
ApaI GGGCCC 1 cut(s) 3317
ApeKI GCWGC 6 cut(s) 1162, 2772, 3178, 3920, 4157, 4160
ArsI GACNNNNNNTTYG 4 cut(s) 2383, 2415, 4230, 4262
AseI ATTAAT 3 cut(s) 2256, 2913, 3033
Asp700I GAANNNNTTC 6 cut(s) 558, 639, 1557, 2571, 2663, 4064
AspLEI GCGC 2 cut(s) 1034, 1193
AspS9I GGNCC 7 cut(s) 668, 1497, 3313, 3314, 3683, 4186, 4251
AsuC2I CCSGG 4 cut(s) 699, 3732, 3804, 4193
AsuHPI GGTGA 7 cut(s) 218, 470, 950, 1589, 3242, 3541, 3923
AsuII TTCGAA 2 cut(s) 841, 1598
AvaI CYCGRG 3 cut(s) 791, 1544, 4255
AvaII GGWCC 2 cut(s) 668, 1497
BaeGI GKGCMC 2 cut(s) 3317, 3466
BalI TGGCCA 2 cut(s) 1456, 3164
BanI GGYRCC 2 cut(s) 1190, 3463
BanII GRGCYC 3 cut(s) 2741, 3317, 3541
BbrPI CACGTG 1 cut(s) 3050
BbsI GAAGAC 7 cut(s) 746, 791, 1511, 1749, 1929, 1974, 4128
BbvCI CCTCAGC 1 cut(s) 1962
BbvI GCAGC 6 cut(s) 1174, 2759, 3190, 3932, 4144, 4147
BccI CCATC 5 cut(s) 366, 1427, 1690, 1721, 4027
BceAI ACGGC 2 cut(s) 14, 2043
BcgI CGANNNNNNTGC 2 cut(s) 2559, 2593
BciT130I CCWGG 2 cut(s) 672, 1495
BclI TGATCA 2 cut(s) 2872, 3073
BcnI CCSGG 4 cut(s) 699, 3732, 3804, 4193
BcoDI GTCTC 3 cut(s) 373, 3038, 4305
BcuI ACTAGT 1 cut(s) 3575
BfoI RGCGCY 2 cut(s) 1035, 1194
BfrI CTTAAG 2 cut(s) 1166, 1316
BglI GCCNNNNNGGC 1 cut(s) 3161
BglII AGATCT 2 cut(s) 1488, 2219
BisI GCNGC 8 cut(s) 493, 1163, 2773, 2998, 3179, 3921, 4158, 4161
BlsI GCNGC 8 cut(s) 494, 1164, 2774, 2999, 3180, 3922, 4159, 4162
Bme1390I CCNGG 6 cut(s) 672, 699, 1495, 3732, 3804, 4193
Bme18I GGWCC 2 cut(s) 668, 1497
BmeRI GACNNNNNGTC 1 cut(s) 3204
BmeT110I CYCGRG 3 cut(s) 791, 1544, 4255
BmgBI CACGTC 1 cut(s) 1420
BmgT120I GGNCC 7 cut(s) 668, 1497, 3313, 3314, 3683, 4186, 4251
BmiI GGNNCC 4 cut(s) 1192, 3315, 3465, 3540
BmrFI CCNGG 6 cut(s) 672, 699, 1495, 3732, 3804, 4193
BmrI ACTGGG 4 cut(s) 1509, 3311, 3404, 3543
BmsI GCATC 5 cut(s) 1721, 2039, 2041, 3661, 3907
BmuI ACTGGG 4 cut(s) 1509, 3311, 3404, 3543
BoxI GACNNNNGTC 1 cut(s) 3050
BpiI GAAGAC 7 cut(s) 746, 791, 1511, 1749, 1929, 1974, 4128
BplI GAGNNNNNCTC 2 cut(s) 1132, 1164
BpmI CTGGAG 2 cut(s) 324, 693
Bpu10I CCTNAGC 3 cut(s) 252, 1872, 1962
Bpu14I TTCGAA 2 cut(s) 841, 1598
BpuEI CTTGAG 8 cut(s) 123, 963, 1622, 1948, 2150, 2401, 2480, 4150
BpuMI CCSGG 4 cut(s) 699, 3732, 3804, 4193
BsaAI YACGTR 1 cut(s) 3050
BsaBI GATNNNNATC 1 cut(s) 333
BsaHI GRCGYC 4 cut(s) 73, 85, 1191, 3200
BsaJI CCNNGG 7 cut(s) 697, 1532, 1607, 1800, 2581, 4254, 4326
BsaWI WCCGGW 3 cut(s) 3671, 3768, 3995
BsaXI ACNNNNNCTCC 2 cut(s) 3523, 3553
Bsc4I CCNNNNNNNGG 4 cut(s) 1273, 2582, 3361, 4170
Bse1I ACTGG 7 cut(s) 307, 552, 1515, 2568, 3317, 3410, 3538
Bse3DI GCAATG 1 cut(s) 2089
Bse8I GATNNNNATC 1 cut(s) 333
BseAI TCCGGA 3 cut(s) 3671, 3768, 3995
BseBI CCWGG 2 cut(s) 672, 1495
BseDI CCNNGG 7 cut(s) 697, 1532, 1607, 1800, 2581, 4254, 4326
BseGI GGATG 8 cut(s) 334, 436, 763, 1736, 2245, 3062, 3404, 4019
BseJI GATNNNNATC 1 cut(s) 333
BseLI CCNNNNNNNGG 4 cut(s) 1273, 2582, 3361, 4170
BseMI GCAATG 1 cut(s) 2089
BseMII CTCAG 8 cut(s) 266, 577, 1064, 1863, 1953, 3182, 3281, 3843
BseNI ACTGG 7 cut(s) 307, 552, 1515, 2568, 3317, 3410, 3538
BseRI GAGGAG 8 cut(s) 2747, 3255, 3258, 3531, 4124, 4127, 4130, 4148
BseSI GKGCMC 2 cut(s) 3317, 3466
BseXI GCAGC 6 cut(s) 1174, 2759, 3190, 3932, 4144, 4147
BseYI CCCAGC 3 cut(s) 2177, 3151, 3474
BsgI GTGCAG 4 cut(s) 1501, 2279, 2578, 4136
BshFI GGCC 6 cut(s) 1456, 3164, 3315, 3684, 4187, 4252
BshNI GGYRCC 2 cut(s) 1190, 3463
BsiHKCI CYCGRG 3 cut(s) 791, 1544, 4255
BsiSI CCGG 7 cut(s) 699, 3672, 3732, 3769, 3803, 3996, 4193
BslFI GGGAC 5 cut(s) 96, 339, 680, 1527, 3887
BslI CCNNNNNNNGG 4 cut(s) 1273, 2582, 3361, 4170
BsmAI GTCTC 3 cut(s) 373, 3038, 4305
BsmFI GGGAC 5 cut(s) 96, 339, 680, 1527, 3887
BsmI GAATGC 4 cut(s) 1371, 1993, 2663, 2971
BsnI GGCC 6 cut(s) 1456, 3164, 3315, 3684, 4187, 4252
BsoBI CYCGRG 3 cut(s) 791, 1544, 4255
Bsp119I TTCGAA 2 cut(s) 841, 1598
Bsp120I GGGCCC 1 cut(s) 3313
Bsp1286I GDGCHC 4 cut(s) 2741, 3317, 3466, 3541
Bsp13I TCCGGA 3 cut(s) 3671, 3768, 3995
Bsp1407I TGTACA 3 cut(s) 1378, 3114, 3378
BspACI CCGC 6 cut(s) 492, 1846, 2942, 2997, 3123, 4048
BspANI GGCC 6 cut(s) 1456, 3164, 3315, 3684, 4187, 4252
BspCNI CTCAG 8 cut(s) 265, 576, 1065, 1864, 1954, 3183, 3280, 3842
BspEI TCCGGA 3 cut(s) 3671, 3768, 3995
BspHI TCATGA 2 cut(s) 321, 1093
BspLI GGNNCC 4 cut(s) 1192, 3315, 3465, 3540
BspPI GGATC 3 cut(s) 947, 2199, 3682
BspQI GCTCTTC 1 cut(s) 697
BspT104I TTCGAA 2 cut(s) 841, 1598
BspT107I GGYRCC 2 cut(s) 1190, 3463
BspTI CTTAAG 2 cut(s) 1166, 1316
BsrDI GCAATG 1 cut(s) 2089
BsrGI TGTACA 3 cut(s) 1378, 3114, 3378
BsrI ACTGG 7 cut(s) 307, 552, 1515, 2568, 3317, 3410, 3538
BssECI CCNNGG 7 cut(s) 697, 1532, 1607, 1800, 2581, 4254, 4326
BssNAI GTATAC 1 cut(s) 1299
BssNI GRCGYC 4 cut(s) 73, 85, 1191, 3200
BssT1I CCWWGG 4 cut(s) 1532, 1607, 1800, 4326
Bst1107I GTATAC 1 cut(s) 1299
Bst2UI CCWGG 2 cut(s) 672, 1495
Bst6I CTCTTC 8 cut(s) 697, 1692, 2481, 2712, 3036, 3231, 3497, 3921
BstACI GRCGYC 4 cut(s) 73, 85, 1191, 3200
BstAFI CTTAAG 2 cut(s) 1166, 1316
BstAUI TGTACA 3 cut(s) 1378, 3114, 3378
BstBAI YACGTR 1 cut(s) 3050
BstBI TTCGAA 2 cut(s) 841, 1598
BstC8I GCNNGC 6 cut(s) 1030, 3002, 3480, 4094, 4151, 4155
BstENI CCTNNNNNAGG 1 cut(s) 4168
BstF5I GGATG 8 cut(s) 334, 436, 763, 1736, 2245, 3062, 3404, 4019
BstH2I RGCGCY 2 cut(s) 1035, 1194
BstHHI GCGC 2 cut(s) 1034, 1193
BstMAI GTCTC 3 cut(s) 373, 3038, 4305
BstMWI GCNNNNNNNGC 4 cut(s) 1168, 1289, 3161, 3979
BstNI CCWGG 2 cut(s) 672, 1495
BstNSI RCATGY 3 cut(s) 1359, 2539, 3596
BstPAI GACNNNNGTC 1 cut(s) 3050
BstSCI CCNGG 6 cut(s) 670, 697, 1493, 3730, 3802, 4191
BstSLI GKGCMC 2 cut(s) 3317, 3466
BstV1I GCAGC 6 cut(s) 1174, 2759, 3190, 3932, 4144, 4147
BstV2I GAAGAC 7 cut(s) 746, 791, 1511, 1749, 1929, 1974, 4128
BstX2I RGATCY 3 cut(s) 952, 1488, 2219
BstXI CCANNNNNNTGG 2 cut(s) 302, 550
BstYI RGATCY 3 cut(s) 952, 1488, 2219
BstZ17I GTATAC 1 cut(s) 1299
BsuRI GGCC 6 cut(s) 1456, 3164, 3315, 3684, 4187, 4252
BtrI CACGTC 1 cut(s) 1420
BtsCI GGATG 8 cut(s) 334, 436, 763, 1736, 2245, 3062, 3404, 4019
BtsI GCAGTG 1 cut(s) 502
BtsIMutI CAGTG 7 cut(s) 478, 502, 545, 1278, 3568, 3837, 4206
Cac8I GCNNGC 6 cut(s) 1030, 3002, 3480, 4094, 4151, 4155
CaiI CAGNNNCTG 1 cut(s) 2054
CciI TCATGA 2 cut(s) 321, 1093
CfoI GCGC 2 cut(s) 1034, 1193
Cfr13I GGNCC 7 cut(s) 668, 1497, 3313, 3314, 3683, 4186, 4251
CseI GACGC 5 cut(s) 81, 145, 341, 605, 4218
CspCI CAANNNNNGTGG 8 cut(s) 399, 434, 976, 1011, 2055, 2090, 3276, 3311
DinI GGCGCC 1 cut(s) 1192
DraI TTTAAA 4 cut(s) 1261, 1474, 3627, 3777
DriI GACNNNNNGTC 1 cut(s) 3204
EaeI YGGCCR 2 cut(s) 1454, 3162
Eam1104I CTCTTC 8 cut(s) 697, 1692, 2481, 2712, 3036, 3231, 3497, 3921
Eam1105I GACNNNNNGTC 1 cut(s) 3204
EarI CTCTTC 8 cut(s) 697, 1692, 2481, 2712, 3036, 3231, 3497, 3921
EciI GGCGGA 1 cut(s) 2931
Eco130I CCWWGG 4 cut(s) 1532, 1607, 1800, 4326
Eco24I GRGCYC 3 cut(s) 2741, 3317, 3541
Eco32I GATATC 2 cut(s) 2988, 3188
Eco47I GGWCC 2 cut(s) 668, 1497
Eco47III AGCGCT 1 cut(s) 1033
Eco57I CTGAAG 5 cut(s) 2027, 2244, 3158, 3482, 3922
Eco72I CACGTG 1 cut(s) 3050
Eco88I CYCGRG 3 cut(s) 791, 1544, 4255
EcoNI CCTNNNNNAGG 1 cut(s) 4168
EcoO109I RGGNCCY 1 cut(s) 668
EcoRI GAATTC 3 cut(s) 275, 837, 1321
EcoRII CCWGG 2 cut(s) 670, 1493
EcoRV GATATC 2 cut(s) 2988, 3188
EcoT14I CCWWGG 4 cut(s) 1532, 1607, 1800, 4326
EcoT22I ATGCAT 1 cut(s) 1371
EcoT38I GRGCYC 3 cut(s) 2741, 3317, 3541
EgeI GGCGCC 1 cut(s) 1192
EheI GGCGCC 1 cut(s) 1192
ErhI CCWWGG 4 cut(s) 1532, 1607, 1800, 4326
FalI AAGNNNNNCTT 2 cut(s) 3314, 3346
FaqI GGGAC 5 cut(s) 96, 339, 680, 1527, 3887
FauNDI CATATG 1 cut(s) 3119
FbaI TGATCA 2 cut(s) 2872, 3073
FblI GTMKAC 1 cut(s) 1298
Fnu4HI GCNGC 8 cut(s) 493, 1163, 2773, 2998, 3179, 3921, 4158, 4161
FokI GGATG 8 cut(s) 341, 443, 770, 1743, 2252, 3049, 3391, 4006
FriOI GRGCYC 3 cut(s) 2741, 3317, 3541
Fsp4HI GCNGC 8 cut(s) 493, 1163, 2773, 2998, 3179, 3921, 4158, 4161
GlaI GCGC 2 cut(s) 1033, 1192
GluI GCNGC 8 cut(s) 493, 1163, 2773, 2998, 3179, 3921, 4158, 4161
GsaI CCCAGC 3 cut(s) 2181, 3155, 3478
GsuI CTGGAG 2 cut(s) 324, 693
HaeII RGCGCY 2 cut(s) 1035, 1194
HaeIII GGCC 6 cut(s) 1456, 3164, 3315, 3684, 4187, 4252
HapII CCGG 7 cut(s) 699, 3672, 3732, 3769, 3803, 3996, 4193
HgaI GACGC 5 cut(s) 81, 145, 341, 605, 4218
HhaI GCGC 2 cut(s) 1034, 1193
Hin1I GRCGYC 4 cut(s) 73, 85, 1191, 3200
Hin6I GCGC 2 cut(s) 1032, 1191
HinP1I GCGC 2 cut(s) 1032, 1191
HincII GTYRAC 3 cut(s) 408, 3055, 3081
HindII GTYRAC 3 cut(s) 408, 3055, 3081
HindIII AAGCTT 3 cut(s) 1119, 2546, 3841
HpaII CCGG 7 cut(s) 699, 3672, 3732, 3769, 3803, 3996, 4193
HphI GGTGA 7 cut(s) 218, 470, 950, 1589, 3242, 3541, 3923
Hpy99I CGWCG 1 cut(s) 161
HpyCH4IV ACGT 6 cut(s) 85, 1419, 2131, 2907, 3049, 3200
HpyF10VI GCNNNNNNNGC 4 cut(s) 1168, 1289, 3161, 3979
HpySE526I ACGT 6 cut(s) 85, 1419, 2131, 2907, 3049, 3200
Hsp92I GRCGYC 4 cut(s) 73, 85, 1191, 3200
HspAI GCGC 2 cut(s) 1032, 1191
KasI GGCGCC 1 cut(s) 1190
Kpn2I TCCGGA 3 cut(s) 3671, 3768, 3995
Ksp22I TGATCA 2 cut(s) 2872, 3073
LguI GCTCTTC 1 cut(s) 697
LmnI GCTCC 3 cut(s) 890, 3544, 3998
Lsp1109I GCAGC 6 cut(s) 1174, 2759, 3190, 3932, 4144, 4147
LweI GCATC 5 cut(s) 1721, 2039, 2041, 3661, 3907
MaeII ACGT 6 cut(s) 85, 1419, 2131, 2907, 3049, 3200
MaeIII GTNAC 9 cut(s) 571, 1018, 1142, 1671, 2242, 2672, 3196, 3529, 3898
MfeI CAATTG 2 cut(s) 18, 1151
MflI RGATCY 3 cut(s) 952, 1488, 2219
MhlI GDGCHC 4 cut(s) 2741, 3317, 3466, 3541
MlsI TGGCCA 2 cut(s) 1456, 3164
MluNI TGGCCA 2 cut(s) 1456, 3164
Mly113I GGCGCC 1 cut(s) 1191
MmeI TCCRAC 8 cut(s) 16, 1626, 1738, 1833, 1842, 3004, 3699, 4275
Mox20I TGGCCA 2 cut(s) 1456, 3164
Mph1103I ATGCAT 1 cut(s) 1371
MroI TCCGGA 3 cut(s) 3671, 3768, 3995
MroXI GAANNNNTTC 6 cut(s) 558, 639, 1557, 2571, 2663, 4064
MscI TGGCCA 2 cut(s) 1456, 3164
MslI CAYNNNNRTG 5 cut(s) 222, 487, 548, 1572, 2757
Msp20I TGGCCA 2 cut(s) 1456, 3164
MspCI CTTAAG 2 cut(s) 1166, 1316
MspI CCGG 7 cut(s) 699, 3672, 3732, 3769, 3803, 3996, 4193
MspR9I CCNGG 6 cut(s) 672, 699, 1495, 3732, 3804, 4193
MunI CAATTG 2 cut(s) 18, 1151
Mva1269I GAATGC 4 cut(s) 1371, 1993, 2663, 2971
MvaI CCWGG 2 cut(s) 672, 1495
MwoI GCNNNNNNNGC 4 cut(s) 1168, 1289, 3161, 3979
NarI GGCGCC 1 cut(s) 1191
NciI CCSGG 4 cut(s) 699, 3732, 3804, 4193
NdeI CATATG 1 cut(s) 3119
NlaIV GGNNCC 4 cut(s) 1192, 3315, 3465, 3540
NmeAIII GCCGAG 1 cut(s) 73
NmuCI GTSAC 6 cut(s) 1018, 2242, 2672, 3196, 3529, 3898
NsiI ATGCAT 1 cut(s) 1371
NspI RCATGY 3 cut(s) 1359, 2539, 3596
NspV TTCGAA 2 cut(s) 841, 1598
OliI CACNNNNGTG 2 cut(s) 487, 548
PagI TCATGA 2 cut(s) 321, 1093
PciI ACATGT 2 cut(s) 1355, 2535
PciSI GCTCTTC 1 cut(s) 697
PctI GAATGC 4 cut(s) 1371, 1993, 2663, 2971
PdmI GAANNNNTTC 6 cut(s) 558, 639, 1557, 2571, 2663, 4064
PfeI GAWTC 7 cut(s) 508, 1466, 2409, 2589, 2700, 3347, 4012
PflFI GACNNNGTC 1 cut(s) 599
PflMI CCANNNNNTGG 1 cut(s) 1273
PfoI TCCNGGA 2 cut(s) 670, 3730
PkrI GCNGC 8 cut(s) 494, 1164, 2774, 2999, 3180, 3922, 4159, 4162
PluTI GGCGCC 1 cut(s) 1194
PmaCI CACGTG 1 cut(s) 3050
PmlI CACGTG 1 cut(s) 3050
Ppu21I YACGTR 1 cut(s) 3050
PpuMI RGGWCCY 1 cut(s) 668
PscI ACATGT 2 cut(s) 1355, 2535
PshAI GACNNNNGTC 1 cut(s) 3050
PshBI ATTAAT 3 cut(s) 2256, 2913, 3033
Psp5II RGGWCCY 1 cut(s) 668
Psp6I CCWGG 2 cut(s) 670, 1493
PspCI CACGTG 1 cut(s) 3050
PspFI CCCAGC 3 cut(s) 2177, 3151, 3474
PspGI CCWGG 2 cut(s) 670, 1493
PspN4I GGNNCC 4 cut(s) 1192, 3315, 3465, 3540
PspOMI GGGCCC 1 cut(s) 3313
PspPI GGNCC 7 cut(s) 668, 1497, 3313, 3314, 3683, 4186, 4251
PspPPI RGGWCCY 1 cut(s) 668
PstNI CAGNNNCTG 1 cut(s) 2054
PsuI RGATCY 3 cut(s) 952, 1488, 2219
PsyI GACNNNGTC 1 cut(s) 599
RseI CAYNNNNRTG 5 cut(s) 222, 487, 548, 1572, 2757
SapI GCTCTTC 1 cut(s) 697
SatI GCNGC 8 cut(s) 493, 1163, 2773, 2998, 3179, 3921, 4158, 4161
Sau96I GGNCC 7 cut(s) 668, 1497, 3313, 3314, 3683, 4186, 4251
ScrFI CCNGG 6 cut(s) 672, 699, 1495, 3732, 3804, 4193
SduI GDGCHC 4 cut(s) 2741, 3317, 3466, 3541
SfaNI GCATC 5 cut(s) 1721, 2039, 2041, 3661, 3907
SfoI GGCGCC 1 cut(s) 1192
SfuI TTCGAA 2 cut(s) 841, 1598
SinI GGWCC 2 cut(s) 668, 1497
SmiMI CAYNNNNRTG 5 cut(s) 222, 487, 548, 1572, 2757
SpeI ACTAGT 1 cut(s) 3575
SsiI CCGC 6 cut(s) 492, 1846, 2942, 2997, 3123, 4048
SspDI GGCGCC 1 cut(s) 1190
SspI AATATT 3 cut(s) 121, 1603, 3514
StyD4I CCNGG 6 cut(s) 670, 697, 1493, 3730, 3802, 4191
StyI CCWWGG 4 cut(s) 1532, 1607, 1800, 4326
TaiI ACGT 6 cut(s) 88, 1422, 2134, 2910, 3052, 3203
TaqI TCGA 8 cut(s) 240, 841, 1285, 1598, 1920, 2126, 2756, 4312
TatI WGTACW 7 cut(s) 51, 1378, 2693, 3090, 3114, 3378, 4177
TauI GCSGC 2 cut(s) 495, 3000
TfiI GAWTC 7 cut(s) 508, 1466, 2409, 2589, 2700, 3347, 4012
TscAI CASTG 7 cut(s) 478, 502, 552, 1278, 3568, 3837, 4206
TseFI GTSAC 6 cut(s) 1018, 2242, 2672, 3196, 3529, 3898
TseI GCWGC 6 cut(s) 1162, 2772, 3178, 3920, 4157, 4160
Tsp45I GTSAC 6 cut(s) 1018, 2242, 2672, 3196, 3529, 3898
TspGWI ACGGA 5 cut(s) 1356, 2261, 2607, 2656, 4121
TspRI CASTG 7 cut(s) 478, 502, 552, 1278, 3568, 3837, 4206
Tth111I GACNNNGTC 1 cut(s) 599
Van91I CCANNNNNTGG 1 cut(s) 1273
Vha464I CTTAAG 2 cut(s) 1166, 1316
VpaK11BI GGWCC 2 cut(s) 668, 1497
VspI ATTAAT 3 cut(s) 2256, 2913, 3033
XagI CCTNNNNNAGG 1 cut(s) 4168
XbaI TCTAGA 2 cut(s) 833, 3709
XceI RCATGY 3 cut(s) 1359, 2539, 3596
XcmI CCANNNNNNNNNTGG 2 cut(s) 1430, 2108
XmiI GTMKAC 1 cut(s) 1298
XmnI GAANNNNTTC 6 cut(s) 558, 639, 1557, 2571, 2663, 4064
ZraI GACGTC 2 cut(s) 86, 3201
Zsp2I ATGCAT 1 cut(s) 1371
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.