pycom09g18410

disease resistance

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
Physical Location & Seq
Reverse (-)
19101454 .. 19105347
3894 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g18410.2

Sequence Viewer

Length: 2115 bp
ATGGGTATAAAAAGCTTCAAGCAATGGGAGGGTGAAGGTTTGGTCGATGGCAGAAGAAGTAATGCTAGCGTTTCAGAGCTGAAGCACTTACCTCATCTATCTGCATTGGACATACACATTCCAGATGCTAACCTTCTTCCAACCAACTTGTTCTCCAATAAGTTAGAAAGATACACCATACTTGTCGGTGATTGTTGGGAGTATCCTAACATCCTTGCAACCTCATCTAACATGCTAAAACTCAAGCTCACCCGGAGAAATCAATTCGACCGAGGTATAAAGTTGCTGGTAAAGAAATGTGAGCAGTTGTACTTGGATGGGGTGGAGATTGTGAATATTATTTCCTCTCTATTTGACAGTGAAGCTGTCAGACAACTGAAGCATCTCCATATCCAAAACAACGATGAAGTTAAATATGTCACTAAATTCGTCAATTGGAGTTATTCTCATAATGCCTTCTCCAACCTGGAATCTCTAGCTCTTGAAAACCTTGTGAGTTTGGAAAGTGTATGTTATGGGCAACTCATAGGCGAGCCTTTCCGAAAGTTAAAATCTTTGACACTTCGGAATCTACCAAAGCTTATTGGTTTCTCTTCCAAAAACAAGCAACTAACGATTGCTACAGAAGCCAACGAAATCGTTACGGAGGATGAAGTTGGTGGACCACCGAGACTCTTCAATAATGGGGAGGTTTTGATACCAAACTTAACAAACTTAGCTGTGCATCAATGTGATAGTTTAAGATTCTTGTTTTCGAGTTCCATGGCTAAATGTCTCGGACAACTCAAACATCTCACAATATCCAAATGTCAGGCACTACAAATGGTATATGACACATCATCTACCACTTGGGTGAATGGTTTTGAGTGCCCAAATCTACACTTCGTTGACATAGACTCATGTCATAGTTTGAAAAATGTTTTTCCCGCCTCGGTGGCCAAAGATCTTAAGCAGCTAAAGATGTTGAAGGTTAAGAATTGTGATTTACTGGAGGAAATTGTCGAGAAGAAAGAAGGACCAGAAACGGCATATGAGGAGTTCGAGTTCCCTAAAGTAACATTTATGCAATTTCATAACCTGCCCCAACTTGGGAGTTTCTATCCAGGATTGCATGTTTCTAATTGGCCATCACTCAACATCTTAAAGTTCACAAAATGCGGTGGTGTGGAGATTTTGCCTGCCGAATTTTCAACATATCAAGACAAACTTGAGTTGGGCCACCCAAGGCCAACGAAACAACCTTTCTTTTTAATGGAGAAGGATAAGTCATTCCTCAACTTGGAATACTTAGTTTTGGACGAGAACACAGAGATTTTGTATGGTCCACTCCCGGCAGAGTTGTTGAGAAAACTAAAAGGAATTGGTTTTGCTACTTCACATCCCAAGTCGGATGATTTCTTTGAGAATTTACAGAATATTGAAGAGCTCCGTGTGTTCTCTGCTCCTTGGAAAGAATTAATTGTCCACAACCACCAAGGAAGTAGTAGCGGGGAAATACATGAAGTTAAGACCCTCCCACGTGTAAAGGGTTTGTGGCTCATCAATATGCCGGAGCTGATACATCTAGGAAAGGAGAACTCCCAACCAGGGGGCCCTGTTTTTCCAAACGTGGAATTTCTATGCCTAGAAAAATGTGGCAGATTAGAGAATCTAGCTTCAACTTTGATATCCTTTCGGAATCTAACCACTTTGACCATATTGGATTGTCACGGACTGCAATACTTAATACCTTATTCTGTGGCTCAGAATCTGCAGCACCTCAAGAAGTTGGTAGTTAAGTCCTGTGAAAGAATGGTAGAAATAGTGGCAAGCAACGAAAATGATTCAGAAAATGAGATTACTTTCAATTGCTTGAAAGATTTGCAACTTTCTGGTCTACCAAGTCTGCAAGGATTTTGCACGGGAAATTGCATTTTCAAAGTCCCATCCTTACCCACTTTGATTGTCGAGGACTGCCAGCTGATCAAGTTAAAGATTTCTCCTGATGGGTTACTCCAAAGTGATCCAAGACCAGAAAGACAACAAATAGCAGAGGAAACTGATGATGTACTGAAGCTAAGTGATTCAAAGGAGAATGATCGTGATCAAACCGTAAGTTCTTCATTCACTAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

705

Amino Acids

79.61

Weight (kDa)

5.85

Isoelectric Point (pI)

44.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1086
AccI GTMKAC 1 cut(s) 1876
AciI CCGC 3 cut(s) 927, 1158, 1488
AclWI GGATC 1 cut(s) 1997
AcoI YGGCCR 2 cut(s) 936, 1124
AcsI RAATTY 4 cut(s) 425, 1184, 1405, 1613
AcuI CTGAAG 3 cut(s) 101, 398, 2072
AcvI CACGTG 1 cut(s) 1520
AfaI GTAC 2 cut(s) 311, 2049
AfiI CCNNNNNNNGG 5 cut(s) 1088, 1089, 1279, 1587, 1588
AflII CTTAAG 1 cut(s) 947
AflIII ACRYGT 1 cut(s) 1519
AjnI CCWGG 3 cut(s) 465, 1102, 1585
AleI CACNNNNGTG 1 cut(s) 851
AloI GAACNNNNNNTCC 2 cut(s) 1028, 1060
Alw21I GWGCWC 1 cut(s) 1428
Alw26I GTCTC 2 cut(s) 664, 779
AlwI GGATC 1 cut(s) 1997
AlwNI CAGNNNCTG 1 cut(s) 1750
AoxI GGCC 5 cut(s) 936, 1124, 1216, 1226, 1591
ApaI GGGCCC 1 cut(s) 1595
ApeKI GCWGC 2 cut(s) 952, 1753
ApoI RAATTY 4 cut(s) 425, 1184, 1405, 1613
AseI ATTAAT 1 cut(s) 1457
AspS9I GGNCC 6 cut(s) 662, 1016, 1216, 1322, 1591, 1592
AsuC2I CCSGG 2 cut(s) 253, 1331
AsuHPI GGTGA 4 cut(s) 44, 200, 241, 865
AsuNHI GCTAGC 1 cut(s) 65
AvaII GGWCC 3 cut(s) 662, 1016, 1322
BaeGI GKGCMC 2 cut(s) 872, 1595
BalI TGGCCA 2 cut(s) 938, 1126
BanII GRGCYC 2 cut(s) 1428, 1595
BbrPI CACGTG 1 cut(s) 1520
Bbv12I GWGCWC 1 cut(s) 1428
BbvI GCAGC 2 cut(s) 964, 1765
BccI CCATC 5 cut(s) 41, 311, 1135, 1933, 1979
BceAI ACGGC 1 cut(s) 1041
BciT130I CCWGG 3 cut(s) 467, 1104, 1587
BciVI GTATCC 1 cut(s) 213
BclI TGATCA 2 cut(s) 1962, 2083
BcnI CCSGG 2 cut(s) 253, 1331
BcoDI GTCTC 2 cut(s) 664, 779
BfaI CTAG 5 cut(s) 66, 476, 1565, 1625, 1652
BfmI CTRYAG 2 cut(s) 621, 1751
BfrI CTTAAG 1 cut(s) 947
BfuAI ACCTGC 1 cut(s) 1086
BfuI GTATCC 1 cut(s) 213
BglI GCCNNNNNGGC 1 cut(s) 935
BglII AGATCT 1 cut(s) 943
BisI GCNGC 2 cut(s) 953, 1754
BlsI GCNGC 2 cut(s) 954, 1755
Bme1390I CCNGG 5 cut(s) 253, 467, 1104, 1331, 1587
Bme18I GGWCC 3 cut(s) 662, 1016, 1322
BmgT120I GGNCC 6 cut(s) 662, 1016, 1216, 1322, 1591, 1592
BmiI GGNNCC 2 cut(s) 1592, 1593
BmrFI CCNGG 5 cut(s) 253, 467, 1104, 1331, 1587
BmsI GCATC 3 cut(s) 115, 391, 733
BmtI GCTAGC 1 cut(s) 69
BoxI GACNNNNGTC 1 cut(s) 900
BplI GAGNNNNNCTC 2 cut(s) 430, 462
BpmI CTGGAG 1 cut(s) 1010
BpuEI CTTGAG 3 cut(s) 227, 1229, 1745
BpuMI CCSGG 2 cut(s) 253, 1331
BsaAI YACGTR 1 cut(s) 1520
BsaBI GATNNNNATC 1 cut(s) 2082
BsaJI CCNNGG 7 cut(s) 271, 762, 930, 1223, 1445, 1474, 1586
BsaXI ACNNNNNCTCC 4 cut(s) 137, 167, 1028, 1058
Bsc4I CCNNNNNNNGG 5 cut(s) 1088, 1089, 1279, 1587, 1588
Bse1I ACTGG 1 cut(s) 993
Bse3DI GCAATG 1 cut(s) 29
Bse8I GATNNNNATC 1 cut(s) 2082
BseBI CCWGG 3 cut(s) 467, 1104, 1587
BseDI CCNNGG 7 cut(s) 271, 762, 930, 1223, 1445, 1474, 1586
BseGI GGATG 6 cut(s) 210, 322, 655, 1378, 1396, 1925
BseJI GATNNNNATC 1 cut(s) 2082
BseLI CCNNNNNNNGG 5 cut(s) 1088, 1089, 1279, 1587, 1588
BseMI GCAATG 1 cut(s) 29
BseMII CTCAG 1 cut(s) 1757
BseNI ACTGG 1 cut(s) 993
BseRI GAGGAG 1 cut(s) 1049
BseSI GKGCMC 2 cut(s) 872, 1595
BseXI GCAGC 2 cut(s) 964, 1765
Bsh1285I CGRYCG 1 cut(s) 271
BshFI GGCC 5 cut(s) 938, 1126, 1218, 1228, 1593
BsiEI CGRYCG 1 cut(s) 271
BsiHKAI GWGCWC 1 cut(s) 1428
BsiSI CCGG 3 cut(s) 253, 1331, 1550
BslFI GGGAC 1 cut(s) 1907
BslI CCNNNNNNNGG 5 cut(s) 1088, 1089, 1279, 1587, 1588
BsmAI GTCTC 2 cut(s) 664, 779
BsmFI GGGAC 1 cut(s) 1907
BsnI GGCC 5 cut(s) 938, 1126, 1218, 1228, 1593
Bsp120I GGGCCC 1 cut(s) 1591
Bsp1286I GDGCHC 3 cut(s) 872, 1428, 1595
Bsp143I GATC 5 cut(s) 943, 1962, 2002, 2077, 2083
Bsp19I CCATGG 1 cut(s) 762
BspACI CCGC 3 cut(s) 927, 1158, 1488
BspANI GGCC 5 cut(s) 938, 1126, 1218, 1228, 1593
BspCNI CTCAG 1 cut(s) 1756
BspLI GGNNCC 2 cut(s) 1592, 1593
BspMAI CTGCAG 1 cut(s) 1755
BspMI ACCTGC 1 cut(s) 1086
BspOI GCTAGC 1 cut(s) 69
BspPI GGATC 1 cut(s) 1997
BspQI GCTCTTC 1 cut(s) 1416
BspTI CTTAAG 1 cut(s) 947
BsrDI GCAATG 1 cut(s) 29
BsrI ACTGG 1 cut(s) 993
BssECI CCNNGG 7 cut(s) 271, 762, 930, 1223, 1445, 1474, 1586
BssMI GATC 5 cut(s) 943, 1962, 2002, 2077, 2083
BssT1I CCWWGG 4 cut(s) 762, 1223, 1445, 1474
Bst2UI CCWGG 3 cut(s) 467, 1104, 1587
Bst4CI ACNGT 2 cut(s) 359, 2092
Bst6I CTCTTC 3 cut(s) 598, 680, 1416
BstAFI CTTAAG 1 cut(s) 947
BstBAI YACGTR 1 cut(s) 1520
BstC8I GCNNGC 5 cut(s) 67, 533, 1179, 1810, 1958
BstDEI CTNAG 4 cut(s) 715, 1288, 1743, 2057
BstDSI CCRYGG 1 cut(s) 762
BstF5I GGATG 6 cut(s) 210, 322, 655, 1378, 1396, 1925
BstKTI GATC 5 cut(s) 946, 1965, 2005, 2080, 2086
BstMAI GTCTC 2 cut(s) 664, 779
BstMBI GATC 5 cut(s) 943, 1962, 2002, 2077, 2083
BstMCI CGRYCG 1 cut(s) 271
BstMWI GCNNNNNNNGC 2 cut(s) 626, 935
BstNI CCWGG 3 cut(s) 467, 1104, 1587
BstNSI RCATGY 2 cut(s) 235, 1115
BstPAI GACNNNNGTC 1 cut(s) 900
BstSCI CCNGG 5 cut(s) 251, 465, 1102, 1329, 1585
BstSFI CTRYAG 2 cut(s) 621, 1751
BstSLI GKGCMC 2 cut(s) 872, 1595
BstV1I GCAGC 2 cut(s) 964, 1765
BstX2I RGATCY 1 cut(s) 943
BstYI RGATCY 1 cut(s) 943
BsuI GTATCC 1 cut(s) 213
BsuRI GGCC 5 cut(s) 938, 1126, 1218, 1228, 1593
BtgI CCRYGG 1 cut(s) 762
BtsCI GGATG 6 cut(s) 210, 322, 655, 1378, 1396, 1925
BtsIMutI CAGTG 1 cut(s) 364
BveI ACCTGC 1 cut(s) 1086
Cac8I GCNNGC 5 cut(s) 67, 533, 1179, 1810, 1958
CaiI CAGNNNCTG 1 cut(s) 1750
Cfr13I GGNCC 6 cut(s) 662, 1016, 1216, 1322, 1591, 1592
Csp6I GTAC 2 cut(s) 310, 2048
CspCI CAANNNNNGTGG 2 cut(s) 1924, 1959
CviAII CATG 5 cut(s) 232, 763, 900, 1112, 1499
CviQI GTAC 2 cut(s) 310, 2048
DdeI CTNAG 4 cut(s) 715, 1288, 1743, 2057
DpnI GATC 5 cut(s) 945, 1964, 2004, 2079, 2085
DpnII GATC 5 cut(s) 943, 1962, 2002, 2077, 2083
EaeI YGGCCR 2 cut(s) 936, 1124
Eam1104I CTCTTC 3 cut(s) 598, 680, 1416
EarI CTCTTC 3 cut(s) 598, 680, 1416
Ecl136II GAGCTC 1 cut(s) 1426
Eco130I CCWWGG 4 cut(s) 762, 1223, 1445, 1474
Eco24I GRGCYC 2 cut(s) 1428, 1595
Eco32I GATATC 1 cut(s) 1668
Eco47I GGWCC 3 cut(s) 662, 1016, 1322
Eco53kI GAGCTC 1 cut(s) 1426
Eco57I CTGAAG 3 cut(s) 101, 398, 2072
Eco72I CACGTG 1 cut(s) 1520
EcoICRI GAGCTC 1 cut(s) 1426
EcoO109I RGGNCCY 2 cut(s) 1591, 1592
EcoRII CCWGG 3 cut(s) 465, 1102, 1585
EcoRV GATATC 1 cut(s) 1668
EcoT14I CCWWGG 4 cut(s) 762, 1223, 1445, 1474
EcoT38I GRGCYC 2 cut(s) 1428, 1595
ErhI CCWWGG 4 cut(s) 762, 1223, 1445, 1474
FaeI CATG 5 cut(s) 235, 766, 903, 1115, 1502
FalI AAGNNNNNCTT 2 cut(s) 1191, 1223
FaqI GGGAC 1 cut(s) 1907
FatI CATG 5 cut(s) 231, 762, 899, 1111, 1498
FauI CCCGC 2 cut(s) 934, 1481
FauNDI CATATG 1 cut(s) 1030
FbaI TGATCA 2 cut(s) 1962, 2083
FblI GTMKAC 1 cut(s) 1876
Fnu4HI GCNGC 2 cut(s) 953, 1754
FokI GGATG 6 cut(s) 197, 329, 662, 1365, 1403, 1912
FriOI GRGCYC 2 cut(s) 1428, 1595
Fsp4HI GCNGC 2 cut(s) 953, 1754
FspBI CTAG 5 cut(s) 66, 476, 1565, 1625, 1652
GluI GCNGC 2 cut(s) 953, 1754
GsuI CTGGAG 1 cut(s) 1010
HaeIII GGCC 5 cut(s) 938, 1126, 1218, 1228, 1593
HapII CCGG 3 cut(s) 253, 1331, 1550
Hin1II CATG 5 cut(s) 235, 766, 903, 1115, 1502
HincII GTYRAC 1 cut(s) 889
HindII GTYRAC 1 cut(s) 889
HindIII AAGCTT 2 cut(s) 13, 578
HpaII CCGG 3 cut(s) 253, 1331, 1550
HphI GGTGA 4 cut(s) 44, 200, 241, 865
Hpy166II GTNNAC 6 cut(s) 662, 889, 1149, 1325, 1465, 1877
Hpy188I TCNGA 9 cut(s) 76, 371, 542, 567, 779, 1390, 1677, 1746, 1828
Hpy188III TCNNGA 7 cut(s) 122, 482, 1003, 1199, 1762, 1982, 2081
Hpy8I GTNNAC 6 cut(s) 662, 889, 1149, 1325, 1465, 1877
HpyAV CCTTC 6 cut(s) 29, 143, 466, 961, 1007, 1252
HpyCH4III ACNGT 2 cut(s) 359, 2092
HpyCH4IV ACGT 2 cut(s) 1519, 1608
HpyF10VI GCNNNNNNNGC 2 cut(s) 626, 935
HpyF3I CTNAG 4 cut(s) 715, 1288, 1743, 2057
HpySE526I ACGT 2 cut(s) 1519, 1608
Hsp92II CATG 5 cut(s) 235, 766, 903, 1115, 1502
Ksp22I TGATCA 2 cut(s) 1962, 2083
Kzo9I GATC 5 cut(s) 943, 1962, 2002, 2077, 2083
LguI GCTCTTC 1 cut(s) 1416
LmnI GCTCC 3 cut(s) 1431, 1447, 1552
Lsp1109I GCAGC 2 cut(s) 964, 1765
LweI GCATC 3 cut(s) 115, 391, 733
MaeI CTAG 5 cut(s) 66, 476, 1565, 1625, 1652
MaeII ACGT 2 cut(s) 1519, 1608
MaeIII GTNAC 5 cut(s) 418, 640, 1054, 1706, 1989
MalI GATC 5 cut(s) 945, 1964, 2004, 2079, 2085
MboI GATC 5 cut(s) 943, 1962, 2002, 2077, 2083
MboII GAAGA 7 cut(s) 66, 128, 585, 667, 1018, 1433, 2091
MfeI CAATTG 2 cut(s) 433, 1846
MflI RGATCY 1 cut(s) 943
MhlI GDGCHC 3 cut(s) 872, 1428, 1595
MlsI TGGCCA 2 cut(s) 938, 1126
MluNI TGGCCA 2 cut(s) 938, 1126
MlyI GAGTC 2 cut(s) 666, 890
MmeI TCCRAC 3 cut(s) 164, 486, 1368
Mox20I TGGCCA 2 cut(s) 938, 1126
MscI TGGCCA 2 cut(s) 938, 1126
MslI CAYNNNNRTG 3 cut(s) 729, 851, 1544
Msp20I TGGCCA 2 cut(s) 938, 1126
MspA1I CMGCKG 1 cut(s) 1960
MspCI CTTAAG 1 cut(s) 947
MspI CCGG 3 cut(s) 253, 1331, 1550
MspR9I CCNGG 5 cut(s) 253, 467, 1104, 1331, 1587
MunI CAATTG 2 cut(s) 433, 1846
MvaI CCWGG 3 cut(s) 467, 1104, 1587
MwoI GCNNNNNNNGC 2 cut(s) 626, 935
NciI CCSGG 2 cut(s) 253, 1331
NcoI CCATGG 1 cut(s) 762
NdeI CATATG 1 cut(s) 1030
NdeII GATC 5 cut(s) 943, 1962, 2002, 2077, 2083
NheI GCTAGC 1 cut(s) 65
NlaIII CATG 5 cut(s) 235, 766, 903, 1115, 1502
NlaIV GGNNCC 2 cut(s) 1592, 1593
NmuCI GTSAC 2 cut(s) 418, 1706
NspI RCATGY 2 cut(s) 235, 1115
OliI CACNNNNGTG 1 cut(s) 851
PciSI GCTCTTC 1 cut(s) 1416
PfeI GAWTC 8 cut(s) 470, 568, 744, 1648, 1678, 1747, 1823, 2063
PfoI TCCNGGA 1 cut(s) 1102
PkrI GCNGC 2 cut(s) 954, 1755
PleI GAGTC 2 cut(s) 666, 890
PmaCI CACGTG 1 cut(s) 1520
PmlI CACGTG 1 cut(s) 1520
PpsI GAGTC 2 cut(s) 666, 890
Ppu21I YACGTR 1 cut(s) 1520
PshAI GACNNNNGTC 1 cut(s) 900
PshBI ATTAAT 1 cut(s) 1457
Psp124BI GAGCTC 1 cut(s) 1428
Psp6I CCWGG 3 cut(s) 465, 1102, 1585
PspCI CACGTG 1 cut(s) 1520
PspGI CCWGG 3 cut(s) 465, 1102, 1585
PspN4I GGNNCC 2 cut(s) 1592, 1593
PspOMI GGGCCC 1 cut(s) 1591
PspPI GGNCC 6 cut(s) 662, 1016, 1216, 1322, 1591, 1592
PstI CTGCAG 1 cut(s) 1755
PstNI CAGNNNCTG 1 cut(s) 1750
PsuI RGATCY 1 cut(s) 943
PvuII CAGCTG 1 cut(s) 1960
RsaI GTAC 2 cut(s) 311, 2049
RsaNI GTAC 2 cut(s) 310, 2048
RseI CAYNNNNRTG 3 cut(s) 729, 851, 1544
SacI GAGCTC 1 cut(s) 1428
SapI GCTCTTC 1 cut(s) 1416
SatI GCNGC 2 cut(s) 953, 1754
Sau3AI GATC 5 cut(s) 943, 1962, 2002, 2077, 2083
Sau96I GGNCC 6 cut(s) 662, 1016, 1216, 1322, 1591, 1592
SchI GAGTC 2 cut(s) 666, 890
ScrFI CCNGG 5 cut(s) 253, 467, 1104, 1331, 1587
SduI GDGCHC 3 cut(s) 872, 1428, 1595
SfaNI GCATC 3 cut(s) 115, 391, 733
SfcI CTRYAG 2 cut(s) 621, 1751
SinI GGWCC 3 cut(s) 662, 1016, 1322
SmiMI CAYNNNNRTG 3 cut(s) 729, 851, 1544
SmlI CTYRAG 4 cut(s) 242, 947, 1208, 1760
SmoI CTYRAG 4 cut(s) 242, 947, 1208, 1760
SsiI CCGC 3 cut(s) 927, 1158, 1488
SspI AATATT 2 cut(s) 337, 1417
SspMI CTAG 5 cut(s) 66, 476, 1565, 1625, 1652
SstI GAGCTC 1 cut(s) 1428
StyD4I CCNGG 5 cut(s) 251, 465, 1102, 1329, 1585
StyI CCWWGG 4 cut(s) 762, 1223, 1445, 1474
TaaI ACNGT 2 cut(s) 359, 2092
TaiI ACGT 2 cut(s) 1522, 1611
TaqI TCGA 6 cut(s) 45, 267, 755, 1002, 1041, 1947
TaqII GACCGA 1 cut(s) 285
TatI WGTACW 2 cut(s) 309, 2047
TfiI GAWTC 8 cut(s) 470, 568, 744, 1648, 1678, 1747, 1823, 2063
TscAI CASTG 1 cut(s) 364
TseFI GTSAC 2 cut(s) 418, 1706
TseI GCWGC 2 cut(s) 952, 1753
Tsp45I GTSAC 2 cut(s) 418, 1706
TspDTI ATGAA 5 cut(s) 420, 666, 1061, 1515, 2091
TspGWI ACGGA 3 cut(s) 659, 1418, 1725
TspRI CASTG 1 cut(s) 364
Vha464I CTTAAG 1 cut(s) 947
VpaK11BI GGWCC 3 cut(s) 662, 1016, 1322
VspI ATTAAT 1 cut(s) 1457
XapI RAATTY 4 cut(s) 425, 1184, 1405, 1613
XceI RCATGY 2 cut(s) 235, 1115
XmiI GTMKAC 1 cut(s) 1876
XspI CTAG 5 cut(s) 66, 476, 1565, 1625, 1652
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.