disease resistance
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NB-ARC | PF00931 | 158 - 321 | 6.8e-30 | NB-ARC domain |
| LRR_14 | PF23598 | 551 - 684 | 8.9e-09 | Leucine-rich repeat region |
| LRR_RPS2 | PF23247 | 764 - 876 | 1.1e-11 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
| LRR_RPS2 | PF23247 | 915 - 980 | 1.3e-10 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
| LRR_RPS2 | PF23247 | 1113 - 1205 | 5.1e-14 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
| LRR_RPS2 | PF23247 | 1254 - 1415 | 1.7e-16 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
| LRR_RPS2 | PF23247 | 1447 - 1540 | 2.3e-12 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
| LRR_RPS2 | PF23247 | 1583 - 1648 | 4e-12 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
| LRR_RPS2 | PF23247 | 1799 - 1912 | 2e-07 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
| LRR_RPS2 | PF23247 | 1910 - 2008 | 4.3e-11 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1382 |
| Acc36I | ACCTGC | 2 cut(s) | 3168, 4170 |
| AccB1I | GGYRCC | 3 cut(s) | 4114, 5116, 6024 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 647, 3223 |
| AccI | GTMKAC | 3 cut(s) | 434, 1846, 5775 |
| AccII | CGCG | 1 cut(s) | 3115 |
| AciI | CCGC | 7 cut(s) | 145, 1130, 1209, 1461, 2967, 3969, 4971 |
| AclI | AACGTT | 1 cut(s) | 1287 |
| AclWI | GGATC | 7 cut(s) | 1132, 2218, 2697, 3699, 4701, 5540, 5553 |
| AcoI | YGGCCR | 3 cut(s) | 2418, 3420, 4422 |
| AcuI | CTGAAG | 7 cut(s) | 149, 435, 1208, 1572, 1697, 2027, 5477 |
| AcyI | GRCGYC | 1 cut(s) | 6025 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 144, 647, 3223, 5175, 5425, 5686 |
| AflIII | ACRYGT | 3 cut(s) | 2523, 3525, 4527 |
| AjiI | CACGTC | 1 cut(s) | 731 |
| AjnI | CCWGG | 5 cut(s) | 63, 2053, 3184, 4186, 5188 |
| AleI | CACNNNNGTG | 3 cut(s) | 2697, 3699, 4701 |
| Alw21I | GWGCWC | 4 cut(s) | 210, 1608, 5657, 5972 |
| AlwI | GGATC | 7 cut(s) | 1132, 2218, 2697, 3699, 4701, 5540, 5553 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 23, 5758 |
| Ama87I | CYCGRG | 4 cut(s) | 114, 1076, 3449, 5971 |
| AoxI | GGCC | 6 cut(s) | 954, 2418, 3420, 4208, 4422, 5391 |
| ApeKI | GCWGC | 9 cut(s) | 167, 995, 1509, 3148, 4150, 4866, 5104, 5152, 5483 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 2559, 3020, 4022, 5024, 6041 |
| AspA2I | CCTAGG | 3 cut(s) | 2695, 3697, 4699 |
| AspLEI | GCGC | 3 cut(s) | 3115, 5465, 6027 |
| AspS9I | GGNCC | 6 cut(s) | 50, 407, 2182, 2934, 5391, 5411 |
| AsuC2I | CCSGG | 3 cut(s) | 3262, 4264, 5266 |
| AsuII | TTCGAA | 4 cut(s) | 456, 945, 985, 3774 |
| AvaI | CYCGRG | 4 cut(s) | 114, 1076, 3449, 5971 |
| AvaII | GGWCC | 5 cut(s) | 50, 407, 2182, 2934, 5411 |
| AvrII | CCTAGG | 3 cut(s) | 2695, 3697, 4699 |
| BalI | TGGCCA | 3 cut(s) | 2420, 3422, 4424 |
| BamHI | GGATCC | 1 cut(s) | 5545 |
| BanI | GGYRCC | 3 cut(s) | 4114, 5116, 6024 |
| BanII | GRGCYC | 1 cut(s) | 5657 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 3708, 3740 |
| BauI | CACGAG | 1 cut(s) | 1308 |
| Bbv12I | GWGCWC | 4 cut(s) | 210, 1608, 5657, 5972 |
| BbvI | GCAGC | 9 cut(s) | 179, 1007, 1521, 3160, 4162, 4878, 5116, 5164, 5470 |
| BceAI | ACGGC | 3 cut(s) | 794, 1177, 4787 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 5949, 5983, 6173, 6207 |
| BciT130I | CCWGG | 5 cut(s) | 65, 2055, 3186, 4188, 5190 |
| BciVI | GTATCC | 4 cut(s) | 1790, 2494, 3496, 4498 |
| BcnI | CCSGG | 3 cut(s) | 3262, 4264, 5266 |
| BfmI | CTRYAG | 8 cut(s) | 15, 107, 714, 990, 1755, 2830, 5431, 5772 |
| BfoI | RGCGCY | 1 cut(s) | 6028 |
| BfuAI | ACCTGC | 2 cut(s) | 3168, 4170 |
| BfuI | GTATCC | 4 cut(s) | 1790, 2494, 3496, 4498 |
| BglII | AGATCT | 1 cut(s) | 1515 |
| BisI | GCNGC | 9 cut(s) | 168, 996, 1510, 3149, 4151, 4867, 5105, 5153, 5484 |
| BlnI | CCTAGG | 3 cut(s) | 2695, 3697, 4699 |
| BlpI | GCTNAGC | 1 cut(s) | 326 |
| BlsI | GCNGC | 9 cut(s) | 169, 997, 1511, 3150, 4152, 4868, 5106, 5154, 5485 |
| BmcAI | AGTACT | 4 cut(s) | 1069, 2650, 3652, 4654 |
| Bme1390I | CCNGG | 8 cut(s) | 65, 2055, 3186, 3262, 4188, 4264, 5190, 5266 |
| Bme18I | GGWCC | 5 cut(s) | 50, 407, 2182, 2934, 5411 |
| BmeT110I | CYCGRG | 4 cut(s) | 114, 1076, 3449, 5971 |
| BmgBI | CACGTC | 1 cut(s) | 731 |
| BmgT120I | GGNCC | 6 cut(s) | 50, 407, 2182, 2934, 5391, 5411 |
| BmiI | GGNNCC | 5 cut(s) | 4116, 5118, 5392, 5547, 6026 |
| BmrFI | CCNGG | 8 cut(s) | 65, 2055, 3186, 3262, 4188, 4264, 5190, 5266 |
| BmrI | ACTGGG | 4 cut(s) | 384, 2859, 3861, 4162 |
| BmuI | ACTGGG | 4 cut(s) | 384, 2859, 3861, 4162 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2187 |
| BplI | GAGNNNNNCTC | 8 cut(s) | 1075, 1107, 3284, 3316, 4286, 4318, 5288, 5320 |
| BpmI | CTGGAG | 4 cut(s) | 2141, 2802, 3804, 4806 |
| Bpu10I | CCTNAGC | 3 cut(s) | 1769, 2584, 4588 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 326 |
| Bpu14I | TTCGAA | 4 cut(s) | 456, 945, 985, 3774 |
| BpuEI | CTTGAG | 7 cut(s) | 1262, 1951, 3264, 3571, 3946, 4948, 5972 |
| BpuMI | CCSGG | 3 cut(s) | 3262, 4264, 5266 |
| Bsa29I | ATCGAT | 3 cut(s) | 1168, 1732, 2263 |
| BsaAI | YACGTR | 2 cut(s) | 2108, 3458 |
| BsaBI | GATNNNNATC | 3 cut(s) | 1447, 3607, 4609 |
| BsaHI | GRCGYC | 1 cut(s) | 6025 |
| BsaWI | WCCGGW | 1 cut(s) | 5671 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 2063, 2093, 2229, 2259, 5940, 5970 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 144, 647, 3223, 5175, 5425, 5686 |
| Bse118I | RCCGGY | 1 cut(s) | 956 |
| Bse3DI | GCAATG | 2 cut(s) | 82, 1269 |
| Bse8I | GATNNNNATC | 3 cut(s) | 1447, 3607, 4609 |
| BseBI | CCWGG | 5 cut(s) | 65, 2055, 3186, 4188, 5190 |
| BseCI | ATCGAT | 3 cut(s) | 1168, 1732, 2263 |
| BseJI | GATNNNNATC | 3 cut(s) | 1447, 3607, 4609 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 144, 647, 3223, 5175, 5425, 5686 |
| BseMI | GCAATG | 2 cut(s) | 82, 1269 |
| BseMII | CTCAG | 7 cut(s) | 1458, 1801, 2320, 2452, 4602, 5880, 5953 |
| BseRI | GAGGAG | 4 cut(s) | 195, 2630, 3632, 4634 |
| BseXI | GCAGC | 9 cut(s) | 179, 1007, 1521, 3160, 4162, 4878, 5116, 5164, 5470 |
| BseYI | CCCAGC | 2 cut(s) | 5366, 5419 |
| BsgI | GTGCAG | 1 cut(s) | 1528 |
| Bsh1236I | CGCG | 1 cut(s) | 3115 |
| BshFI | GGCC | 6 cut(s) | 956, 2420, 3422, 4210, 4424, 5393 |
| BshNI | GGYRCC | 3 cut(s) | 4114, 5116, 6024 |
| BshVI | ATCGAT | 3 cut(s) | 1168, 1732, 2263 |
| BsiHKAI | GWGCWC | 4 cut(s) | 210, 1608, 5657, 5972 |
| BsiHKCI | CYCGRG | 4 cut(s) | 114, 1076, 3449, 5971 |
| BsiSI | CCGG | 5 cut(s) | 957, 3261, 4263, 5265, 5672 |
| BslFI | GGGAC | 9 cut(s) | 479, 1448, 1604, 3018, 3202, 4020, 4204, 5022, 5206 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 144, 647, 3223, 5175, 5425, 5686 |
| BsmBI | CGTCTC | 1 cut(s) | 2774 |
| BsmFI | GGGAC | 9 cut(s) | 479, 1448, 1604, 3018, 3202, 4020, 4204, 5022, 5206 |
| BsmI | GAATGC | 4 cut(s) | 452, 1139, 1395, 5982 |
| BsnI | GGCC | 6 cut(s) | 956, 2420, 3422, 4210, 4424, 5393 |
| BsoBI | CYCGRG | 4 cut(s) | 114, 1076, 3449, 5971 |
| Bsp119I | TTCGAA | 4 cut(s) | 456, 945, 985, 3774 |
| Bsp1286I | GDGCHC | 4 cut(s) | 210, 1608, 5657, 5972 |
| Bsp1407I | TGTACA | 2 cut(s) | 2462, 4717 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 326 |
| Bsp19I | CCATGG | 1 cut(s) | 5394 |
| BspACI | CCGC | 7 cut(s) | 145, 1130, 1209, 1461, 2967, 3969, 4971 |
| BspANI | GGCC | 6 cut(s) | 956, 2420, 3422, 4210, 4424, 5393 |
| BspCNI | CTCAG | 7 cut(s) | 1459, 1800, 2319, 2451, 4601, 5881, 5952 |
| BspDI | ATCGAT | 3 cut(s) | 1168, 1732, 2263 |
| BspFNI | CGCG | 1 cut(s) | 3115 |
| BspLI | GGNNCC | 5 cut(s) | 4116, 5118, 5392, 5547, 6026 |
| BspMAI | CTGCAG | 2 cut(s) | 19, 2834 |
| BspMI | ACCTGC | 2 cut(s) | 3168, 4170 |
| BspPI | GGATC | 7 cut(s) | 1132, 2218, 2697, 3699, 4701, 5540, 5553 |
| BspQI | GCTCTTC | 2 cut(s) | 2550, 5094 |
| BspT104I | TTCGAA | 4 cut(s) | 456, 945, 985, 3774 |
| BspT107I | GGYRCC | 3 cut(s) | 4114, 5116, 6024 |
| BsrDI | GCAATG | 2 cut(s) | 82, 1269 |
| BsrFI | RCCGGY | 1 cut(s) | 956 |
| BsrGI | TGTACA | 2 cut(s) | 2462, 4717 |
| BssAI | RCCGGY | 1 cut(s) | 956 |
| BssNI | GRCGYC | 1 cut(s) | 6025 |
| BssSI | CACGAG | 1 cut(s) | 1308 |
| BssT1I | CCWWGG | 9 cut(s) | 289, 2185, 2367, 2695, 3697, 4371, 4699, 5385, 5394 |
| Bst2BI | CACGAG | 1 cut(s) | 1308 |
| Bst2UI | CCWGG | 5 cut(s) | 65, 2055, 3186, 4188, 5190 |
| Bst6I | CTCTTC | 6 cut(s) | 172, 411, 2550, 3090, 4092, 5094 |
| BstACI | GRCGYC | 1 cut(s) | 6025 |
| BstAUI | TGTACA | 2 cut(s) | 2462, 4717 |
| BstBAI | YACGTR | 2 cut(s) | 2108, 3458 |
| BstBI | TTCGAA | 4 cut(s) | 456, 945, 985, 3774 |
| BstC8I | GCNNGC | 6 cut(s) | 1459, 4776, 5477, 5481, 5910, 6023 |
| BstDSI | CCRYGG | 2 cut(s) | 810, 5394 |
| BstFNI | CGCG | 1 cut(s) | 3115 |
| BstH2I | RGCGCY | 1 cut(s) | 6028 |
| BstHHI | GCGC | 3 cut(s) | 3115, 5465, 6027 |
| BstNI | CCWGG | 5 cut(s) | 65, 2055, 3186, 4188, 5190 |
| BstNSI | RCATGY | 9 cut(s) | 1461, 1692, 2527, 3197, 3529, 4199, 4531, 5167, 5201 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2187 |
| BstSCI | CCNGG | 8 cut(s) | 63, 2053, 3184, 3260, 4186, 4262, 5188, 5264 |
| BstSFI | CTRYAG | 8 cut(s) | 15, 107, 714, 990, 1755, 2830, 5431, 5772 |
| BstSNI | TACGTA | 2 cut(s) | 2108, 3458 |
| BstUI | CGCG | 1 cut(s) | 3115 |
| BstV1I | GCAGC | 9 cut(s) | 179, 1007, 1521, 3160, 4162, 4878, 5116, 5164, 5470 |
| BstX2I | RGATCY | 3 cut(s) | 1515, 2210, 5545 |
| BstXI | CCANNNNNNTGG | 4 cut(s) | 562, 700, 883, 5786 |
| BstYI | RGATCY | 3 cut(s) | 1515, 2210, 5545 |
| Bsu15I | ATCGAT | 3 cut(s) | 1168, 1732, 2263 |
| BsuI | GTATCC | 4 cut(s) | 1790, 2494, 3496, 4498 |
| BsuRI | GGCC | 6 cut(s) | 956, 2420, 3422, 4210, 4424, 5393 |
| BsuTUI | ATCGAT | 3 cut(s) | 1168, 1732, 2263 |
| BtgI | CCRYGG | 2 cut(s) | 810, 5394 |
| BtrI | CACGTC | 1 cut(s) | 731 |
| BtsI | GCAGTG | 1 cut(s) | 557 |
| BveI | ACCTGC | 2 cut(s) | 3168, 4170 |
| Cac8I | GCNNGC | 6 cut(s) | 1459, 4776, 5477, 5481, 5910, 6023 |
| CaiI | CAGNNNCTG | 2 cut(s) | 23, 5758 |
| CfoI | GCGC | 3 cut(s) | 3115, 5465, 6027 |
| Cfr10I | RCCGGY | 1 cut(s) | 956 |
| Cfr13I | GGNCC | 6 cut(s) | 50, 407, 2182, 2934, 5391, 5411 |
| ClaI | ATCGAT | 3 cut(s) | 1168, 1732, 2263 |
| CseI | GACGC | 3 cut(s) | 3199, 4201, 5203 |
| CspCI | CAANNNNNGTGG | 6 cut(s) | 997, 1032, 2437, 2454, 2472, 2489 |
| DinI | GGCGCC | 1 cut(s) | 6026 |
| DraI | TTTAAA | 3 cut(s) | 2983, 3985, 4987 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1382 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1382 |
| EaeI | YGGCCR | 3 cut(s) | 2418, 3420, 4422 |
| Eam1104I | CTCTTC | 6 cut(s) | 172, 411, 2550, 3090, 4092, 5094 |
| EarI | CTCTTC | 6 cut(s) | 172, 411, 2550, 3090, 4092, 5094 |
| EciI | GGCGGA | 1 cut(s) | 1145 |
| Ecl136II | GAGCTC | 1 cut(s) | 5655 |
| Eco105I | TACGTA | 2 cut(s) | 2108, 3458 |
| Eco130I | CCWWGG | 9 cut(s) | 289, 2185, 2367, 2695, 3697, 4371, 4699, 5385, 5394 |
| Eco24I | GRGCYC | 1 cut(s) | 5657 |
| Eco32I | GATATC | 1 cut(s) | 750 |
| Eco47I | GGWCC | 5 cut(s) | 50, 407, 2182, 2934, 5411 |
| Eco53kI | GAGCTC | 1 cut(s) | 5655 |
| Eco57I | CTGAAG | 7 cut(s) | 149, 435, 1208, 1572, 1697, 2027, 5477 |
| Eco88I | CYCGRG | 4 cut(s) | 114, 1076, 3449, 5971 |
| EcoICRI | GAGCTC | 1 cut(s) | 5655 |
| EcoRI | GAATTC | 2 cut(s) | 654, 6056 |
| EcoRII | CCWGG | 5 cut(s) | 63, 2053, 3184, 4186, 5188 |
| EcoRV | GATATC | 1 cut(s) | 750 |
| EcoT14I | CCWWGG | 9 cut(s) | 289, 2185, 2367, 2695, 3697, 4371, 4699, 5385, 5394 |
| EcoT22I | ATGCAT | 2 cut(s) | 1395, 5640 |
| EcoT38I | GRGCYC | 1 cut(s) | 5657 |
| EgeI | GGCGCC | 1 cut(s) | 6026 |
| EheI | GGCGCC | 1 cut(s) | 6026 |
| ErhI | CCWWGG | 9 cut(s) | 289, 2185, 2367, 2695, 3697, 4371, 4699, 5385, 5394 |
| Esp3I | CGTCTC | 1 cut(s) | 2774 |
| FaqI | GGGAC | 9 cut(s) | 479, 1448, 1604, 3018, 3202, 4020, 4204, 5022, 5206 |
| FauI | CCCGC | 1 cut(s) | 138 |
| FblI | GTMKAC | 3 cut(s) | 434, 1846, 5775 |
| Fnu4HI | GCNGC | 9 cut(s) | 168, 996, 1510, 3149, 4151, 4867, 5105, 5153, 5484 |
| FriOI | GRGCYC | 1 cut(s) | 5657 |
| Fsp4HI | GCNGC | 9 cut(s) | 168, 996, 1510, 3149, 4151, 4867, 5105, 5153, 5484 |
| GlaI | GCGC | 3 cut(s) | 3114, 5464, 6026 |
| GluI | GCNGC | 9 cut(s) | 168, 996, 1510, 3149, 4151, 4867, 5105, 5153, 5484 |
| GsaI | CCCAGC | 2 cut(s) | 5370, 5423 |
| GsuI | CTGGAG | 4 cut(s) | 2141, 2802, 3804, 4806 |
| HaeII | RGCGCY | 1 cut(s) | 6028 |
| HaeIII | GGCC | 6 cut(s) | 956, 2420, 3422, 4210, 4424, 5393 |
| HapII | CCGG | 5 cut(s) | 957, 3261, 4263, 5265, 5672 |
| HgaI | GACGC | 3 cut(s) | 3199, 4201, 5203 |
| HhaI | GCGC | 3 cut(s) | 3115, 5465, 6027 |
| Hin1I | GRCGYC | 1 cut(s) | 6025 |
| Hin6I | GCGC | 3 cut(s) | 3113, 5463, 6025 |
| HinP1I | GCGC | 3 cut(s) | 3113, 5463, 6025 |
| HindIII | AAGCTT | 4 cut(s) | 1554, 2566, 4570, 6038 |
| HpaI | GTTAAC | 3 cut(s) | 2521, 3523, 4525 |
| HpaII | CCGG | 5 cut(s) | 957, 3261, 4263, 5265, 5672 |
| Hpy99I | CGWCG | 4 cut(s) | 735, 2177, 3506, 4508 |
| HpyCH4IV | ACGT | 9 cut(s) | 730, 979, 1287, 2107, 2147, 2716, 2767, 3457, 3718 |
| HpySE526I | ACGT | 9 cut(s) | 730, 979, 1287, 2107, 2147, 2716, 2767, 3457, 3718 |
| Hsp92I | GRCGYC | 1 cut(s) | 6025 |
| HspAI | GCGC | 3 cut(s) | 3113, 5463, 6025 |
| KasI | GGCGCC | 1 cut(s) | 6024 |
| KspAI | GTTAAC | 3 cut(s) | 2521, 3523, 4525 |
| LguI | GCTCTTC | 2 cut(s) | 2550, 5094 |
| Lsp1109I | GCAGC | 9 cut(s) | 179, 1007, 1521, 3160, 4162, 4878, 5116, 5164, 5470 |
| MaeII | ACGT | 9 cut(s) | 730, 979, 1287, 2107, 2147, 2716, 2767, 3457, 3718 |
| MflI | RGATCY | 3 cut(s) | 1515, 2210, 5545 |
| MhlI | GDGCHC | 4 cut(s) | 210, 1608, 5657, 5972 |
| MlsI | TGGCCA | 3 cut(s) | 2420, 3422, 4424 |
| MluNI | TGGCCA | 3 cut(s) | 2420, 3422, 4424 |
| Mly113I | GGCGCC | 1 cut(s) | 6025 |
| MlyI | GAGTC | 9 cut(s) | 106, 2675, 2816, 3302, 3677, 3818, 4679, 4820, 5306 |
| Mox20I | TGGCCA | 3 cut(s) | 2420, 3422, 4424 |
| Mph1103I | ATGCAT | 2 cut(s) | 1395, 5640 |
| MroXI | GAANNNNTTC | 5 cut(s) | 2559, 3020, 4022, 5024, 6041 |
| MscI | TGGCCA | 3 cut(s) | 2420, 3422, 4424 |
| MslI | CAYNNNNRTG | 9 cut(s) | 198, 2697, 3476, 3699, 4478, 4701, 5399, 5784, 6165 |
| Msp20I | TGGCCA | 3 cut(s) | 2420, 3422, 4424 |
| MspA1I | CMGCKG | 2 cut(s) | 1382, 5107 |
| MspI | CCGG | 5 cut(s) | 957, 3261, 4263, 5265, 5672 |
| MspR9I | CCNGG | 8 cut(s) | 65, 2055, 3186, 3262, 4188, 4264, 5190, 5266 |
| Mva1269I | GAATGC | 4 cut(s) | 452, 1139, 1395, 5982 |
| MvaI | CCWGG | 5 cut(s) | 65, 2055, 3186, 4188, 5190 |
| MvnI | CGCG | 1 cut(s) | 3115 |
| NarI | GGCGCC | 1 cut(s) | 6025 |
| NciI | CCSGG | 3 cut(s) | 3262, 4264, 5266 |
| NcoI | CCATGG | 1 cut(s) | 5394 |
| NlaIV | GGNNCC | 5 cut(s) | 4116, 5118, 5392, 5547, 6026 |
| NmeAIII | GCCGAG | 1 cut(s) | 61 |
| NmuCI | GTSAC | 7 cut(s) | 1039, 1373, 2943, 3945, 4378, 4947, 6131 |
| NsiI | ATGCAT | 2 cut(s) | 1395, 5640 |
| NspI | RCATGY | 9 cut(s) | 1461, 1692, 2527, 3197, 3529, 4199, 4531, 5167, 5201 |
| NspV | TTCGAA | 4 cut(s) | 456, 945, 985, 3774 |
| OliI | CACNNNNGTG | 3 cut(s) | 2697, 3699, 4701 |
| PaeI | GCATGC | 1 cut(s) | 1461 |
| PaeR7I | CTCGAG | 2 cut(s) | 114, 3449 |
| PciI | ACATGT | 3 cut(s) | 2523, 3525, 4527 |
| PciSI | GCTCTTC | 2 cut(s) | 2550, 5094 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 3941, 4943, 6084 |
| PctI | GAATGC | 4 cut(s) | 452, 1139, 1395, 5982 |
| PdmI | GAANNNNTTC | 5 cut(s) | 2559, 3020, 4022, 5024, 6041 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 647, 3223 |
| PkrI | GCNGC | 9 cut(s) | 169, 997, 1511, 3150, 4152, 4868, 5106, 5154, 5485 |
| PleI | GAGTC | 9 cut(s) | 106, 2675, 2816, 3301, 3677, 3818, 4679, 4820, 5305 |
| PluTI | GGCGCC | 1 cut(s) | 6028 |
| PpsI | GAGTC | 9 cut(s) | 106, 2675, 2816, 3301, 3677, 3818, 4679, 4820, 5305 |
| Ppu21I | YACGTR | 2 cut(s) | 2108, 3458 |
| PscI | ACATGT | 3 cut(s) | 2523, 3525, 4527 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2187 |
| Psp124BI | GAGCTC | 1 cut(s) | 5657 |
| Psp1406I | AACGTT | 1 cut(s) | 1287 |
| Psp6I | CCWGG | 5 cut(s) | 63, 2053, 3184, 4186, 5188 |
| PspFI | CCCAGC | 2 cut(s) | 5366, 5419 |
| PspGI | CCWGG | 5 cut(s) | 63, 2053, 3184, 4186, 5188 |
| PspN4I | GGNNCC | 5 cut(s) | 4116, 5118, 5392, 5547, 6026 |
| PspPI | GGNCC | 6 cut(s) | 50, 407, 2182, 2934, 5391, 5411 |
| PspXI | VCTCGAGB | 1 cut(s) | 114 |
| PstI | CTGCAG | 2 cut(s) | 19, 2834 |
| PstNI | CAGNNNCTG | 2 cut(s) | 23, 5758 |
| PsuI | RGATCY | 3 cut(s) | 1515, 2210, 5545 |
| PvuII | CAGCTG | 2 cut(s) | 1382, 5107 |
| RseI | CAYNNNNRTG | 9 cut(s) | 198, 2697, 3476, 3699, 4478, 4701, 5399, 5784, 6165 |
| SacI | GAGCTC | 1 cut(s) | 5657 |
| SapI | GCTCTTC | 2 cut(s) | 2550, 5094 |
| SatI | GCNGC | 9 cut(s) | 168, 996, 1510, 3149, 4151, 4867, 5105, 5153, 5484 |
| Sau96I | GGNCC | 6 cut(s) | 50, 407, 2182, 2934, 5391, 5411 |
| ScaI | AGTACT | 4 cut(s) | 1069, 2650, 3652, 4654 |
| SchI | GAGTC | 9 cut(s) | 106, 2675, 2816, 3302, 3677, 3818, 4679, 4820, 5306 |
| ScrFI | CCNGG | 8 cut(s) | 65, 2055, 3186, 3262, 4188, 4264, 5190, 5266 |
| SduI | GDGCHC | 4 cut(s) | 210, 1608, 5657, 5972 |
| SfcI | CTRYAG | 8 cut(s) | 15, 107, 714, 990, 1755, 2830, 5431, 5772 |
| SfoI | GGCGCC | 1 cut(s) | 6026 |
| Sfr274I | CTCGAG | 2 cut(s) | 114, 3449 |
| SfuI | TTCGAA | 4 cut(s) | 456, 945, 985, 3774 |
| SinI | GGWCC | 5 cut(s) | 50, 407, 2182, 2934, 5411 |
| SlaI | CTCGAG | 2 cut(s) | 114, 3449 |
| SmiMI | CAYNNNNRTG | 9 cut(s) | 198, 2697, 3476, 3699, 4478, 4701, 5399, 5784, 6165 |
| SmlI | CTYRAG | 9 cut(s) | 114, 1241, 1930, 3279, 3449, 3586, 3925, 4927, 5987 |
| SmoI | CTYRAG | 9 cut(s) | 114, 1241, 1930, 3279, 3449, 3586, 3925, 4927, 5987 |
| SnaBI | TACGTA | 2 cut(s) | 2108, 3458 |
| SphI | GCATGC | 1 cut(s) | 1461 |
| SsiI | CCGC | 7 cut(s) | 145, 1130, 1209, 1461, 2967, 3969, 4971 |
| SspDI | GGCGCC | 1 cut(s) | 6024 |
| SspI | AATATT | 6 cut(s) | 1423, 3047, 4049, 5051, 5562, 5798 |
| SstI | GAGCTC | 1 cut(s) | 5657 |
| StyD4I | CCNGG | 8 cut(s) | 63, 2053, 3184, 3260, 4186, 4262, 5188, 5264 |
| StyI | CCWWGG | 9 cut(s) | 289, 2185, 2367, 2695, 3697, 4371, 4699, 5385, 5394 |
| TaiI | ACGT | 9 cut(s) | 733, 982, 1290, 2110, 2150, 2719, 2770, 3460, 3721 |
| TatI | WGTACW | 6 cut(s) | 1067, 2462, 2648, 3650, 4652, 4717 |
| TseFI | GTSAC | 7 cut(s) | 1039, 1373, 2943, 3945, 4378, 4947, 6131 |
| TseI | GCWGC | 9 cut(s) | 167, 995, 1509, 3148, 4150, 4866, 5104, 5152, 5483 |
| Tsp45I | GTSAC | 7 cut(s) | 1039, 1373, 2943, 3945, 4378, 4947, 6131 |
| TspGWI | ACGGA | 5 cut(s) | 1237, 1452, 2912, 3914, 4916 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 647, 3223 |
| VpaK11BI | GGWCC | 5 cut(s) | 50, 407, 2182, 2934, 5411 |
| XbaI | TCTAGA | 8 cut(s) | 854, 1150, 2314, 3040, 3533, 4042, 5044, 5728 |
| XceI | RCATGY | 9 cut(s) | 1461, 1692, 2527, 3197, 3529, 4199, 4531, 5167, 5201 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2165 |
| XhoI | CTCGAG | 2 cut(s) | 114, 3449 |
| XmaJI | CCTAGG | 3 cut(s) | 2695, 3697, 4699 |
| XmiI | GTMKAC | 3 cut(s) | 434, 1846, 5775 |
| XmnI | GAANNNNTTC | 5 cut(s) | 2559, 3020, 4022, 5024, 6041 |
| ZrmI | AGTACT | 4 cut(s) | 1069, 2650, 3652, 4654 |
| Zsp2I | ATGCAT | 2 cut(s) | 1395, 5640 |