Rh5DG390800

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
Physical Location & Seq
Forward (+)
60977707 .. 61024589
46883 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG390800.1

Sequence Viewer

Length: 6357 bp
ATGGCCATGACTACGTCGTCTTCGCTGCCTGGTAGAGGCTTTGATTTGACTGCCGCCGTGACGGCAAGTAATGTCCCCACCACTGGCTTAATGAAGATTCCGTATGGATTTTCTGAGAAAGATGGAAATGCATCAGTGGGAGTGGAGAATGAGCAAGGTTCGAATTCAAAGCCACTGAAAGAGAAGACCACCAAAGCCGAAAGGCGAGTGATTCAGGAGGCTCAGCGAGCAGCAAAGGCTGCTGCAAAAGGTGAAGGAAAGGCATCTTCTGTTAGCAATTCATCCCCAAATTCAGAGTTGTTCGTACACGGAGTAAAGATTGCTGAGACTACAGTTGTACCACTTTATCGCCAAGTGGATTATGTTATTCACTACAAAAGCAACCTTGAAAATCTGAGGGATCAAGTGGATAACTTAGGTTATGCTAAAGACAGAATGCAACATACTCTTGATGATGAAGTCAATAGAAAAGGTAAAAGAGCTGAACGTGATGTTGAAAGTTGGCTCGCAAAAGTGGATGAGATCACTCAAGAGGTTGACGTTTTCTTGGAAGATGAACGCCGTGCAAAGACCAAGTGTTTCCATGGATTTTGTCCTAATCCAATTCTTCGATATCAGCTCAGCAGGAAATCAACAAAATTAGTGCAGAAGGTTGAATTCCTTGAAAAGAGAAAATTTACCACTCTTTCATACAATGTCCCCCCACAAGATGTATGCAGCATTCAATCCCGAGATTACCTAGCTTTTGAATCAAGGCTATCAATTGTGAAAGACATCATGGAGAAACTCCGAGATCCGGATACCAACATAATTGGGGTGTATGGAATTGGTGGGGTGGGTAAGACCACACTCGCCAAAGAAGTCTACAGACAAGCTACAAAAGAGAAGTTATTTGATGATGTTATTATAGTACTAGATGTCAAACTGATTCCAAACTTGGGAGGAATTCAAAAGCAAATTCTTGAGAAGTTAGGTATGGAGGTTGTTAGTGATCAAAGTATAGCTACAAGAGCATCTCTTCTATGGGATAGGATAAAAGACAAGAGGCTTCTTATCATTTTAGATGATGTTCAAAAAAAAATTGATTTGGAGACTATGGGAGTTTTTAGTGCACCAACTTGTAATCTAATGTTCACAGCTAGAGATCGAAGAGTTTTATTCTCTGACATGCAAACACAAAAGGATTTTCAGCTTGATGTTTTGGGAGAAATAGAAACTTGGAGTTTGTTTGAGAAGGTGGCCGGTGATATTGTTAAAGAAAACCCTATAAGAACAAAAGCCAAAGAAGTTGCCAAGAAGTGTGGAGGTCTGCCAATTTTAGTGGTCAATGTTGCAAGTGCCTTGAGAGTTAGTACTTTACATGATTGGAAGGATGCCTTGAGAAAGTTAAAAAAGTTTGACATGAAAGATTTGGCAGAAAAAGCATTGTTAACTCTAGAGTGGAGTTACAATCAATTAGATGCGGAAGAGCTTAAGCCACTATTCCTCCTTTGTGGAATTATTGCTGCTAGGTTTAATAATAGGATATATCTCAAAGACTGCTTCATATATAGTATGGGATTGGGTTTGTTGAAAAATGTGGATACAATAGAAGAAGCACATGTTGCATTTCATTCATTGATTAAAAAGCTTCAAAAATGTTGTTTGTTGCAAGAGCAGCAAGATGATATTAACCATACAACTATCAGTATGCATGAGCTTTTCCGCAATGTTGCCAACATGATTGCACGCAGAGATCAACATGTCTTCTTAAGAGATTTTGAAGTTGAAGAGCAGTTTGAAGAATGGCCAAATAAGGCTTTCTTTGAAAAGTGCACTATGATCTTTCTCCATTCCTTCAATATCCCCACACTTCCTGAAGTCCCTTGGCAATGTCAAGAACTAAAACTGTTTCTCTTGGATAATATGGATCAGTCGCTACAAATAGGGTCAAATTTTTTTGAAAACATGAAAGAACTCAAAGTGTTAGAACTTGTACTGATTCCACCAAATGTTATAGCGAGCTTGAAAAGTCTTGAAGAACTAAGAATGGGAGGAAATAGCTTTAGGCAATGGGAGGCTGAAGGAACCGTGGGTACCAAAAGAACAACAAATGCTAGCCTTTTAGAGCTGAAGCAGTTGTCCAAGCTAACCGCATTAGACATCCACATTCCAAATGCTAGCATTCTTCCATCAGGCTTGTTCTTGCACTTGAAAAGATATCATGTATTCATCGGTGAAGAGTGGAAATGGCTTTCTTTTGATAATATTTTCAACACGGTAAAGCTCAAGCTAGCAACAAGCAATCAATTGGACAGAGGTCTAGAAATGTTGGTGAAGAGATCTAAGCATTTGTACTTGGATGTGATGGAAGGTGTCAATGATATATTTCATTTATTAAATAGTGATGGTAATCAGCAACTGAAACATCTCCAAGTCCAAAACAATGCTGAGATTACATATGTCATCAATCATAATGTCTTCCAGAATTTACAATCTTTGAAATTGATGAATCTACCAAAGCTTGTTAGTTTCTCCTCCAACAGCAGAATAGTTGTTGCAACTGCAACGATGGATGAGCAATTGAAGACTGATGGAGAGTGTAAAGAAATCATTTTGGAGAATGTGATCGAGAGTCCTGTGCAACTTTTCAAGAATGGAGAGATTGTGATGCCAAACTTGACAATCTTGATTGTACATAAATGTGATGGTTTAAGATTCTTGCTATCATCTTCCATGGCTAAGAGTCTTGTACAACTCAAACATCTTGAGGTACATAATTGTCAAATAATGGAAGAGATTGTATCAACAAGAGAATCCGGTGAAGAAATGAATACCGATGACATCTTTTGTAAGCTGAACCATCTTCAACTACAACATCTACCACAACTCACAAGATTCTGCGTAGGAAATTATATTGAATTTCCGTCCTTGGAGATATTGCATGTAGAAGATTGTACTAAACTGGAGACTTTCATCTTTGATCATGCTATGATCAAAAGTGAAGAAACTGATTCAAAGGATAATCTTGAGATTCCTGGACTATATTTTTTGTTTGATGACAAGGATTCATTCCCCAATTTGGAAGATTTGACTTTGGGCGGCACGACGTTGGAGATTTGCGACGGTCCACTCCCAGCAGAGATGTTTTGGAAGCTAAAATATCTTGACATTGCTTCTCCATCCTTCAAGTCATCATATGCTTTTCTTCAAAAATTGTACAACCTTGAAACACTTATTGTGCATGATTCCCATTTGGAGGAGATATTTGTTGATCAAGGAAATGGAAGTGGGCAAATACATGCAGTTGGAACCCATCTCCCACATTTAAGATCTTTGATGCTTGAAGAACTTTCGATGTTGATGCATCTGGGGAAGGAGAACTCCCAACCAATTATTCCAAATTTGGAAATTCTAGAGGTGTCACTCTGTGGGAAATTAAAGAATCTAAGCTCCCCAGCGATATCCTTTCAGAATCTCACCACTCTGAAAGTAATTGGTTGTCAAGGGCTGGAATACTTGATAACTAGCTCGATTGCCCAGAGTCTAAAGCAACTCACACGTTTGGAAGTTAAGGATTGTGAAAGACTGGGGCAAATAGTGGGAAGCAGCAGCGAAGATGAGGCAGGAAATGACATTGCTTTTAACAGGTTGGAGCATTTGGAACTTTCAAGACTGCCCAGTTTGCAATGTTTTTTCTCGGGTACCATGCTTTCTCATCAATTTACAATTTGCGATGAAATTGAAGAGAGTGATGCGAAGGAGAATCTTGATAGTGCTGTACAATACTTTCTATTTGACAAAAAGGTGGGATTACCTAGATTGGAAACACTGATCGTCCATGACCTACATAAGTTGATGAGAATATGGCACGAACAACTTGCTCCAGACTCCTTTTGTAGACTCAAAACAGTTGATGCTCAGAGATGCCAGAGTCTAATAAATATCTTTGGGGCTAGTATTCTGGGAAGATTGAATGCTCTCGACACTTTGAAGCTAACGCAGTGCCACTCGCTACGACTGGTATTCGAACACGGAGGAATCAATGCTGAAGAAGGTGATGATACATCAATCACTCCGTCCGAATTGCCTGAATACTGTCAGAATTTGGCTTCAGTGGAAATAGATTCCTGTGAGAGTTTGAAGAATATCTTTCCAGCCTCAGTAGCCAGAGGTCTTCAGCAGCTGAGGAAGCTGAGTGTAGAGAATTGCGTTAGAGTGGAGGAAATTGTTGCGATGGAAGGACTGGGAATGACAACACCTGAGTTTGTGTTCCCAAACGCAACATCTGTGAAATTTCGAAATCTGCCACGACTTGCAAGTTTTTATCCAGGGATGCACGCTTCCGTGTGGCCTCTACTCGGGGAATTGCGAGTTGAGTCCTGTGATAATGTGGAGATTTTTGCCCTGGAATTTTCAAGATTTCAGGCTAAACCTGAGTTGGGCCTTGTGGGTACAGCTATGAAGCAACCTTTGTTTCTAATCGAGAAGGGTTCATTCTCCAACTTGGAAGATTTGCACCTTTACTCGATGGTAGGTGCAATGAAGAATTGGTGGAGTCCACACCCAGCAGAACTCTTCACCAAACTAAAGTCTCTTTGGTCTCAATCTCCAGTGCTTCAGTCTGGTTTCCTTCAGAACTTACCCCATCTTGAAAGCCTTTTGCTTTATGGTTTTGAGAAAGAAGTATTTGTCCATGAAGGAATTAGTAGTGGAGAAATCCAGGCAGTTGGGACACTACTCCCGCACTTAAAAAGTCTGAGGCTATTTAATATGCCCCAGCTGATGAATCTAGGCAAGGAGAACTCACAACCAGTTCTTCCAAACTTGGAGTTTCTATTGGTGGAGCTTTGTGGGAAATTAAAGAATCTAAGGTCATCCGCAATATCCTTTCAGAATCTAAAAACTTTGGTAGTAGTGGAATGCCACGAATTGGTATATTTGATACCTTGTTCGATAGCTCAAAGCTTAATGCAACTGGAACGTATGGAAGTTAAGGATTGTCAAGGACTGATAGAGATAGTGGCAAATAGCAACCAAGATGATCATGCAGTAAATGAAATTGCATTCATGAGATTACAACGTTTGGAACTTTCTGGTCTACCAAGTCTCCGAAGATTTTGCTCCGGAAATTGTTTAGTTAAAATCCCATCCTTGGATACATTAGTCGTGACCGACTGCCCGGTCAAGTTGAGCATTTCTCCAGATCGGGTACTTCTCACTGATTTTAACCGAGAAAGGTTTCTTCAGAATTTTAGTAATCTTGATAACCTTGTGCTGCATGGTGATCACAAAGAAATATTTTTCCATGAAGAAAATAGTGGCGATGAACTACATGCAGTTGTGACCCTCCCGCATTTAACATCTTTGAAACTTTCAGAAATGAACATGCTAATGCATCTAGGGAAGGAGAACTCCCAATCAGTCATTCCAAATTTGGAAATTCTAGAGGTGTCACTCTGTGGGAAATTAAAGAATCTAAGCTCACCAGCAATATCCTTTAAGAATCTCACAACTCTGAAAGTAATTGGTTGTCAAGGGCTGGAATATTTGATAACTAGCTCGATTGCCCGGAGTCTAATGCAACTCAAACATTTGGAAGTTAAGGATTGTGAAAGACTGGTGCAAATAGTGGGAAGCAGCAGCGAAGATGAGGCAGGAAATGAGATTTCTTTTAACAGGTTGGAGCATTTGGAACTTTCAGGACTGCCCAGTTTGCAATGTTTTTTCTCGGGTACCATGCTTTCTCATCAATTTACAATTTGCGATGAAATTGAAGAGAGTGATGCGAAAGAGAATCTTGATAGTGCTGTACAATATTTTCTATTTGACAAAAAGGTGGGCTTAGCTAGATTGCAAACACTGATCGTCCATGACCTACCTAAGTTGATGAATCTAGGGAAGGAAAATGCCCAACCAGTTATTCCAAATTTGGAGATTCTAAGCGTGGTGCGTTGTTGGAAGTTAAAGAATCTAACATCACCGGCAGTATCCTTTCAAAATTTAAAAACTTTGAAAGTGGAGAGCTGCCACGGACTGGAATATTTGACAACCTACTCGATAGCCCAAAGCTTAACGAAACTCGCACATATGGAAGTCAAGAATTGTCGACGGCTGAAAGATGTAGTGGCAAATAGCAACCAAGCTGATGATGCAGTAAATGAGATTGCATTCATGAGATTACAACATTTAGAACTTTCTGGTTTACCAAGTCTGCAAGGCTTTTGCTCTGGAAATTGCATTGTCAAGCTCCCATTCTTGGATACTTTGACCGTAACTAAATGCCTGATCGACATGAAGATTTCCCCTGATAAGGTACTCCTGAGCAATTCAAAACCGAAAAGATTGAAGTATAGAAGAAGAGGCAAAAGATCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

2118

Amino Acids

239.37

Weight (kDa)

5.87

Isoelectric Point (pI)

39.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 256 - 415 1.3e-25 NB-ARC domain
AAA_22 PF13401 269 - 361 6.5e-06 AAA domain
LRR_RPS2 PF23247 883 - 987 1e-15 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1031 - 1144 2.5e-10 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1142 - 1226 2.2e-11 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1269 - 1345 6.1e-11 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1360 - 1397 9.7e-11 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1618 - 1721 2.7e-13 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1819 - 1904 2.3e-10 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1985 - 2088 2.4e-12 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 16, 5162
Acc65I GGTACC 3 cut(s) 2075, 3683, 5714
AccB1I GGYRCC 3 cut(s) 2075, 3683, 5714
AccB7I CCANNNNNTGG 2 cut(s) 4912, 6016
AccI GTMKAC 4 cut(s) 864, 3880, 5080, 6088
AccIII TCCGGA 2 cut(s) 796, 5105
AciI CCGC 8 cut(s) 54, 1463, 1705, 2133, 3081, 4724, 4860, 5333
AclI AACGTT 1 cut(s) 5062
AclWI GGATC 3 cut(s) 408, 788, 1917
AcoI YGGCCR 3 cut(s) 3, 1239, 1787
AcuI CTGAAG 9 cut(s) 1878, 2082, 2132, 4050, 4077, 4142, 4583, 4598, 5210
AdeI CACNNNGTG 2 cut(s) 3410, 5441
AflII CTTAAG 2 cut(s) 1472, 1750
AflIII ACRYGT 3 cut(s) 1600, 1741, 3539
AjnI CCWGG 5 cut(s) 28, 3016, 4309, 4386, 4701
AjuI GAANNNNNNNTTGG 6 cut(s) 3360, 3392, 5391, 5423, 5886, 5918
Alw21I GWGCWC 2 cut(s) 1114, 1817
Alw26I GTCTC 6 cut(s) 320, 1085, 2942, 4578, 4587, 5093
Alw44I GTGCAC 2 cut(s) 1110, 1813
AlwI GGATC 3 cut(s) 408, 788, 1917
AlwNI CAGNNNCTG 2 cut(s) 2401, 4165
Ama87I CYCGRG 4 cut(s) 729, 3679, 4340, 5710
Aor13HI TCCGGA 2 cut(s) 796, 5105
AoxI GGCC 5 cut(s) 3, 1239, 1787, 4331, 4423
ApaLI GTGCAC 2 cut(s) 1110, 1813
Asp700I GAANNNNTTC 1 cut(s) 5220
Asp718I GGTACC 3 cut(s) 2075, 3683, 5714
AspS9I GGNCC 2 cut(s) 3107, 4423
AsuC2I CCSGG 2 cut(s) 5162, 5551
AsuII TTCGAA 3 cut(s) 161, 4008, 4279
AsuNHI GCTAGC 3 cut(s) 2096, 2159, 2272
AvaI CYCGRG 4 cut(s) 729, 3679, 4340, 5710
AvaII GGWCC 1 cut(s) 3107
BaeGI GKGCMC 2 cut(s) 1114, 1817
BaeI ACNNNNGTAYC 4 cut(s) 321, 354, 5130, 5163
BalI TGGCCA 2 cut(s) 5, 1789
BanI GGYRCC 3 cut(s) 2075, 3683, 5714
BbsI GAAGAC 6 cut(s) 12, 191, 1738, 2452, 2573, 4148
Bbv12I GWGCWC 2 cut(s) 1114, 1817
BbvCI CCTCAGC 1 cut(s) 4166
BceAI ACGGC 4 cut(s) 41, 78, 546, 6107
BcgI CGANNNNNNTGC 6 cut(s) 3325, 3359, 3842, 3876, 5082, 5116
BciT130I CCWGG 5 cut(s) 30, 3018, 4311, 4388, 4703
BciVI GTATCC 5 cut(s) 793, 1576, 5131, 5980, 6235
BclI TGATCA 6 cut(s) 991, 2962, 2973, 3253, 5023, 5266
BcnI CCSGG 2 cut(s) 5162, 5551
BcoDI GTCTC 6 cut(s) 320, 1085, 2942, 4578, 4587, 5093
BfmI CTRYAG 2 cut(s) 330, 865
BfrI CTTAAG 2 cut(s) 1472, 1750
BfuI GTATCC 5 cut(s) 793, 1576, 5131, 5980, 6235
BglI GCCNNNNNGGC 1 cut(s) 62
BglII AGATCT 2 cut(s) 2321, 3311
BlpI GCTNAGC 3 cut(s) 222, 620, 5824
BmcAI AGTACT 2 cut(s) 912, 1354
Bme1390I CCNGG 7 cut(s) 30, 3018, 4311, 4388, 4703, 5162, 5551
Bme18I GGWCC 1 cut(s) 3107
BmeT110I CYCGRG 4 cut(s) 729, 3679, 4340, 5710
BmgT120I GGNCC 2 cut(s) 3107, 4423
BmiI GGNNCC 5 cut(s) 2068, 2077, 3292, 3685, 5716
BmrFI CCNGG 7 cut(s) 30, 3018, 4311, 4388, 4703, 5162, 5551
BmrI ACTGGG 4 cut(s) 3578, 3654, 4235, 5685
BmtI GCTAGC 3 cut(s) 2100, 2163, 2276
BmuI ACTGGG 4 cut(s) 3578, 3654, 4235, 5685
BoxI GACNNNNGTC 1 cut(s) 2298
BpiI GAAGAC 6 cut(s) 12, 191, 1738, 2452, 2573, 4148
BplI GAGNNNNNCTC 2 cut(s) 5164, 5196
BpmI CTGGAG 4 cut(s) 2966, 3849, 4575, 5166
Bpu10I CCTNAGC 2 cut(s) 4166, 6302
Bpu1102I GCTNAGC 3 cut(s) 222, 620, 5824
Bpu14I TTCGAA 3 cut(s) 161, 4008, 4279
BpuEI CTTGAG 7 cut(s) 513, 983, 1363, 1399, 2252, 2768, 3029
BpuMI CCSGG 2 cut(s) 5162, 5551
BsaBI GATNNNNATC 1 cut(s) 2391
BsaI GGTCTC 1 cut(s) 4587
BsaJI CCNNGG 9 cut(s) 583, 1865, 2070, 2715, 2910, 4310, 4386, 5133, 6010
BsaWI WCCGGW 3 cut(s) 796, 2798, 5105
BsaXI ACNNNNNCTCC 6 cut(s) 1470, 1500, 2631, 2661, 5073, 5103
Bse118I RCCGGY 2 cut(s) 1241, 5962
Bse3DI GCAATG 8 cut(s) 1714, 1877, 2057, 3150, 3615, 3674, 4527, 5705
Bse8I GATNNNNATC 1 cut(s) 2391
BseAI TCCGGA 2 cut(s) 796, 5105
BseBI CCWGG 5 cut(s) 30, 3018, 4311, 4388, 4703
BseDI CCNNGG 9 cut(s) 583, 1865, 2070, 2715, 2910, 4310, 4386, 5133, 6010
BseJI GATNNNNATC 1 cut(s) 2391
BseMI GCAATG 8 cut(s) 1714, 1877, 2057, 3150, 3615, 3674, 4527, 5705
BseRI GAGGAG 2 cut(s) 2506, 3254
BseSI GKGCMC 2 cut(s) 1114, 1817
BseYI CCCAGC 4 cut(s) 3115, 3436, 4546, 4758
BsgI GTGCAG 1 cut(s) 665
BshFI GGCC 5 cut(s) 5, 1241, 1789, 4333, 4425
BshNI GGYRCC 3 cut(s) 2075, 3683, 5714
BsiHKAI GWGCWC 2 cut(s) 1114, 1817
BsiHKCI CYCGRG 4 cut(s) 729, 3679, 4340, 5710
BsiSI CCGG 7 cut(s) 797, 1242, 2799, 5106, 5162, 5551, 5963
BslFI GGGAC 4 cut(s) 59, 683, 1847, 4726
BsmAI GTCTC 6 cut(s) 320, 1085, 2942, 4578, 4587, 5093
BsmFI GGGAC 4 cut(s) 59, 683, 1847, 4726
BsmI GAATGC 7 cut(s) 441, 720, 2163, 3961, 4907, 5045, 6149
BsnI GGCC 5 cut(s) 5, 1241, 1789, 4333, 4425
Bso31I GGTCTC 1 cut(s) 4587
BsoBI CYCGRG 4 cut(s) 729, 3679, 4340, 5710
Bsp119I TTCGAA 3 cut(s) 161, 4008, 4279
Bsp1286I GDGCHC 2 cut(s) 1114, 1817
Bsp13I TCCGGA 2 cut(s) 796, 5105
Bsp1407I TGTACA 5 cut(s) 2674, 2731, 3198, 3760, 5791
Bsp1720I GCTNAGC 3 cut(s) 222, 620, 5824
Bsp19I CCATGG 2 cut(s) 583, 2715
BspACI CCGC 8 cut(s) 54, 1463, 1705, 2133, 3081, 4724, 4860, 5333
BspANI GGCC 5 cut(s) 5, 1241, 1789, 4333, 4425
BspEI TCCGGA 2 cut(s) 796, 5105
BspHI TCATGA 3 cut(s) 5049, 6153, 6353
BspLI GGNNCC 5 cut(s) 2068, 2077, 3292, 3685, 5716
BspOI GCTAGC 3 cut(s) 2100, 2163, 2276
BspPI GGATC 3 cut(s) 408, 788, 1917
BspQI GCTCTTC 2 cut(s) 1461, 1764
BspT104I TTCGAA 3 cut(s) 161, 4008, 4279
BspT107I GGYRCC 3 cut(s) 2075, 3683, 5714
BspTI CTTAAG 2 cut(s) 1472, 1750
BspTNI GGTCTC 1 cut(s) 4587
BsrDI GCAATG 8 cut(s) 1714, 1877, 2057, 3150, 3615, 3674, 4527, 5705
BsrFI RCCGGY 2 cut(s) 1241, 5962
BsrGI TGTACA 5 cut(s) 2674, 2731, 3198, 3760, 5791
BssAI RCCGGY 2 cut(s) 1241, 5962
BssECI CCNNGG 9 cut(s) 583, 1865, 2070, 2715, 2910, 4310, 4386, 5133, 6010
BssT1I CCWWGG 5 cut(s) 583, 1865, 2715, 2910, 5133
Bst2UI CCWGG 5 cut(s) 30, 3018, 4311, 4388, 4703
Bst4CI ACNGT 8 cut(s) 334, 1890, 2071, 2260, 3107, 3892, 4079, 6253
BstAFI CTTAAG 2 cut(s) 1472, 1750
BstAPI GCANNNNNTGC 2 cut(s) 239, 1604
BstAUI TGTACA 5 cut(s) 2674, 2731, 3198, 3760, 5791
BstBI TTCGAA 3 cut(s) 161, 4008, 4279
BstC8I GCNNGC 8 cut(s) 228, 507, 1729, 2002, 2098, 2161, 2274, 4320
BstDSI CCRYGG 4 cut(s) 583, 2070, 2715, 6010
BstENI CCTNNNNNAGG 1 cut(s) 33
BstMAI GTCTC 6 cut(s) 320, 1085, 2942, 4578, 4587, 5093
BstNI CCWGG 5 cut(s) 30, 3018, 4311, 4388, 4703
BstNSI RCATGY 7 cut(s) 1171, 1604, 1745, 2927, 3284, 5318, 5371
BstPAI GACNNNNGTC 1 cut(s) 2298
BstSCI CCNGG 7 cut(s) 28, 3016, 4309, 4386, 4701, 5160, 5549
BstSFI CTRYAG 2 cut(s) 330, 865
BstSLI GKGCMC 2 cut(s) 1114, 1817
BstV2I GAAGAC 6 cut(s) 12, 191, 1738, 2452, 2573, 4148
BstX2I RGATCY 3 cut(s) 793, 2321, 3311
BstXI CCANNNNNNTGG 1 cut(s) 4709
BstYI RGATCY 3 cut(s) 793, 2321, 3311
BsuI GTATCC 5 cut(s) 793, 1576, 5131, 5980, 6235
BsuRI GGCC 5 cut(s) 5, 1241, 1789, 4333, 4425
BtgI CCRYGG 4 cut(s) 583, 2070, 2715, 6010
BtgZI GCGATG 4 cut(s) 3729, 4229, 5319, 5760
BtsI GCAGTG 1 cut(s) 3989
BtsIMutI CAGTG 9 cut(s) 81, 141, 173, 3809, 3989, 4101, 4599, 5199, 5840
Cac8I GCNNGC 8 cut(s) 228, 507, 1729, 2002, 2098, 2161, 2274, 4320
CaiI CAGNNNCTG 2 cut(s) 2401, 4165
CciI TCATGA 3 cut(s) 5049, 6153, 6353
Cfr10I RCCGGY 2 cut(s) 1241, 5962
Cfr13I GGNCC 2 cut(s) 3107, 4423
CspCI CAANNNNNGTGG 4 cut(s) 1282, 1302, 1317, 1337
DraI TTTAAA 1 cut(s) 5985
DraIII CACNNNGTG 2 cut(s) 3410, 5441
DrdI GACNNNNNNGTC 2 cut(s) 16, 5162
DseDI GACNNNNNNGTC 2 cut(s) 16, 5162
EaeI YGGCCR 3 cut(s) 3, 1239, 1787
Eco130I CCWWGG 5 cut(s) 583, 1865, 2715, 2910, 5133
Eco31I GGTCTC 1 cut(s) 4587
Eco32I GATATC 3 cut(s) 614, 2201, 3444
Eco47I GGWCC 1 cut(s) 3107
Eco57I CTGAAG 9 cut(s) 1878, 2082, 2132, 4050, 4077, 4142, 4583, 4598, 5210
Eco88I CYCGRG 4 cut(s) 729, 3679, 4340, 5710
EcoNI CCTNNNNNAGG 1 cut(s) 33
EcoRI GAATTC 3 cut(s) 163, 656, 945
EcoRII CCWGG 5 cut(s) 28, 3016, 4309, 4386, 4701
EcoRV GATATC 3 cut(s) 614, 2201, 3444
EcoT14I CCWWGG 5 cut(s) 583, 1865, 2715, 2910, 5133
EcoT22I ATGCAT 4 cut(s) 133, 1695, 3348, 5379
ErhI CCWWGG 5 cut(s) 583, 1865, 2715, 2910, 5133
FaqI GGGAC 4 cut(s) 59, 683, 1847, 4726
FauI CCCGC 2 cut(s) 4731, 5340
FauNDI CATATG 3 cut(s) 2440, 3178, 6069
FbaI TGATCA 6 cut(s) 991, 2962, 2973, 3253, 5023, 5266
FblI GTMKAC 4 cut(s) 864, 3880, 5080, 6088
GsaI CCCAGC 4 cut(s) 3119, 3440, 4550, 4762
GsuI CTGGAG 4 cut(s) 2966, 3849, 4575, 5166
HaeIII GGCC 5 cut(s) 5, 1241, 1789, 4333, 4425
HapII CCGG 7 cut(s) 797, 1242, 2799, 5106, 5162, 5551, 5963
HincII GTYRAC 3 cut(s) 538, 1431, 6089
HindII GTYRAC 3 cut(s) 538, 1431, 6089
HindIII AAGCTT 4 cut(s) 1628, 2501, 4945, 6049
HpaI GTTAAC 1 cut(s) 1431
HpaII CCGG 7 cut(s) 797, 1242, 2799, 5106, 5162, 5551, 5963
Hpy99I CGWCG 4 cut(s) 19, 3091, 3107, 6093
HpyCH4III ACNGT 8 cut(s) 334, 1890, 2071, 2260, 3107, 3892, 4079, 6253
HpyCH4IV ACGT 7 cut(s) 14, 487, 540, 3089, 3541, 4963, 5062
HpySE526I ACGT 7 cut(s) 14, 487, 540, 3089, 3541, 4963, 5062
Kpn2I TCCGGA 2 cut(s) 796, 5105
KpnI GGTACC 3 cut(s) 2079, 3687, 5718
Ksp22I TGATCA 6 cut(s) 991, 2962, 2973, 3253, 5023, 5266
KspAI GTTAAC 1 cut(s) 1431
LguI GCTCTTC 2 cut(s) 1461, 1764
LmnI GCTCC 7 cut(s) 3437, 3634, 3868, 4825, 5108, 5665, 6234
MaeII ACGT 7 cut(s) 14, 487, 540, 3089, 3541, 4963, 5062
MaeIII GTNAC 7 cut(s) 58, 1445, 3402, 5149, 5323, 5433, 6253
MfeI CAATTG 3 cut(s) 762, 2288, 2561
MflI RGATCY 3 cut(s) 793, 2321, 3311
MhlI GDGCHC 2 cut(s) 1114, 1817
MlsI TGGCCA 2 cut(s) 5, 1789
MluNI TGGCCA 2 cut(s) 5, 1789
MlyI GAGTC 9 cut(s) 2623, 2734, 3532, 3863, 3876, 3922, 4367, 4546, 5563
MmeI TCCRAC 7 cut(s) 2544, 3072, 3268, 3612, 4506, 5643, 5918
Mox20I TGGCCA 2 cut(s) 5, 1789
Mph1103I ATGCAT 4 cut(s) 133, 1695, 3348, 5379
MroI TCCGGA 2 cut(s) 796, 5105
MroXI GAANNNNTTC 1 cut(s) 5220
MscI TGGCCA 2 cut(s) 5, 1789
MslI CAYNNNNRTG 2 cut(s) 2682, 5372
Msp20I TGGCCA 2 cut(s) 5, 1789
MspA1I CMGCKG 2 cut(s) 4165, 4762
MspCI CTTAAG 2 cut(s) 1472, 1750
MspI CCGG 7 cut(s) 797, 1242, 2799, 5106, 5162, 5551, 5963
MspR9I CCNGG 7 cut(s) 30, 3018, 4311, 4388, 4703, 5162, 5551
MunI CAATTG 3 cut(s) 762, 2288, 2561
Mva1269I GAATGC 7 cut(s) 441, 720, 2163, 3961, 4907, 5045, 6149
MvaI CCWGG 5 cut(s) 30, 3018, 4311, 4388, 4703
NciI CCSGG 2 cut(s) 5162, 5551
NcoI CCATGG 2 cut(s) 583, 2715
NdeI CATATG 3 cut(s) 2440, 3178, 6069
NheI GCTAGC 3 cut(s) 2096, 2159, 2272
NlaIV GGNNCC 5 cut(s) 2068, 2077, 3292, 3685, 5716
NmuCI GTSAC 5 cut(s) 58, 3402, 5149, 5323, 5433
NsiI ATGCAT 4 cut(s) 133, 1695, 3348, 5379
NspI RCATGY 7 cut(s) 1171, 1604, 1745, 2927, 3284, 5318, 5371
NspV TTCGAA 3 cut(s) 161, 4008, 4279
PagI TCATGA 3 cut(s) 5049, 6153, 6353
PciI ACATGT 2 cut(s) 1600, 1741
PciSI GCTCTTC 2 cut(s) 1461, 1764
PctI GAATGC 7 cut(s) 441, 720, 2163, 3961, 4907, 5045, 6149
PdmI GAANNNNTTC 1 cut(s) 5220
PflFI GACNNNGTC 1 cut(s) 13
PflMI CCANNNNNTGG 2 cut(s) 4912, 6016
PfoI TCCNGGA 1 cut(s) 3016
PleI GAGTC 9 cut(s) 2622, 2733, 3531, 3863, 3876, 3921, 4366, 4545, 5562
PpsI GAGTC 9 cut(s) 2622, 2733, 3531, 3863, 3876, 3921, 4366, 4545, 5562
PscI ACATGT 2 cut(s) 1600, 1741
PshAI GACNNNNGTC 1 cut(s) 2298
Psp1406I AACGTT 1 cut(s) 5062
Psp6I CCWGG 5 cut(s) 28, 3016, 4309, 4386, 4701
PspFI CCCAGC 4 cut(s) 3115, 3436, 4546, 4758
PspGI CCWGG 5 cut(s) 28, 3016, 4309, 4386, 4701
PspN4I GGNNCC 5 cut(s) 2068, 2077, 3292, 3685, 5716
PspPI GGNCC 2 cut(s) 3107, 4423
PsrI GAACNNNNNNTAC 2 cut(s) 2059, 2091
PstNI CAGNNNCTG 2 cut(s) 2401, 4165
PsuI RGATCY 3 cut(s) 793, 2321, 3311
PsyI GACNNNGTC 1 cut(s) 13
PvuII CAGCTG 2 cut(s) 4165, 4762
RseI CAYNNNNRTG 2 cut(s) 2682, 5372
SalI GTCGAC 1 cut(s) 6087
SapI GCTCTTC 2 cut(s) 1461, 1764
Sau96I GGNCC 2 cut(s) 3107, 4423
ScaI AGTACT 2 cut(s) 912, 1354
SchI GAGTC 9 cut(s) 2623, 2734, 3532, 3863, 3876, 3922, 4367, 4546, 5563
ScrFI CCNGG 7 cut(s) 30, 3018, 4311, 4388, 4703, 5162, 5551
SduI GDGCHC 2 cut(s) 1114, 1817
SfcI CTRYAG 2 cut(s) 330, 865
SfuI TTCGAA 3 cut(s) 161, 4008, 4279
SinI GGWCC 1 cut(s) 3107
SmiMI CAYNNNNRTG 2 cut(s) 2682, 5372
SmlI CTYRAG 9 cut(s) 528, 962, 1342, 1378, 1472, 1750, 2267, 2747, 3008
SmoI CTYRAG 9 cut(s) 528, 962, 1342, 1378, 1472, 1750, 2267, 2747, 3008
SsiI CCGC 8 cut(s) 54, 1463, 1705, 2133, 3081, 4724, 4860, 5333
SspI AATATT 5 cut(s) 2248, 5280, 5528, 5798, 6023
StyD4I CCNGG 7 cut(s) 28, 3016, 4309, 4386, 4701, 5160, 5549
StyI CCWWGG 5 cut(s) 583, 1865, 2715, 2910, 5133
TaaI ACNGT 8 cut(s) 334, 1890, 2071, 2260, 3107, 3892, 4079, 6253
TaiI ACGT 7 cut(s) 17, 490, 543, 3092, 3544, 4966, 5065
TaqII GACCGA 1 cut(s) 5168
TauI GCSGC 2 cut(s) 56, 3084
TscAI CASTG 9 cut(s) 88, 141, 180, 3816, 3989, 4101, 4599, 5206, 5847
TseFI GTSAC 5 cut(s) 58, 3402, 5149, 5323, 5433
Tsp45I GTSAC 5 cut(s) 58, 3402, 5149, 5323, 5433
TspGWI ACGGA 7 cut(s) 90, 324, 2895, 4029, 4047, 4315, 6027
TspRI CASTG 9 cut(s) 88, 141, 180, 3816, 3989, 4101, 4599, 5206, 5847
Tth111I GACNNNGTC 1 cut(s) 13
Van91I CCANNNNNTGG 2 cut(s) 4912, 6016
Vha464I CTTAAG 2 cut(s) 1472, 1750
VneI GTGCAC 2 cut(s) 1110, 1813
VpaK11BI GGWCC 1 cut(s) 3107
XagI CCTNNNNNAGG 1 cut(s) 33
XbaI TCTAGA 4 cut(s) 1435, 2302, 3394, 5425
XceI RCATGY 7 cut(s) 1171, 1604, 1745, 2927, 3284, 5318, 5371
XmiI GTMKAC 4 cut(s) 864, 3880, 5080, 6088
XmnI GAANNNNTTC 1 cut(s) 5220
ZrmI AGTACT 2 cut(s) 912, 1354
Zsp2I ATGCAT 4 cut(s) 133, 1695, 3348, 5379
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.