Rh2DG210800

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0000042
Physical Location & Seq
Reverse (-)
19886690 .. 19948576
61887 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG210800.1

Sequence Viewer

Length: 7365 bp
ATGGAGATTCCTACTGCAGTTGCTGGAAAAACTGCCGAGTTTGCAGTTGAACCAGTTATACGCCAGGGGGGTTATATAATTCATTACAAAAGCAACCTTCATACACTACAGACTCGAGTGGATGAACTGAAGGCTACCAGAGAGCGGGTTCAGAATGAGATTGATGCAGCGAAGAGAAGAGGAGATAACATCCATCTTGATGTCGAGAACTGGAAGAAAAAAGTTGATGAGACCACTGGAAAAGCAGAGGAATTATTGAATGATGACAGAGCAAAGATGAAGTGTCTCCTTGGTTTTTGTCCTAATCTATTGACCCGTCATCAGCTAAGCAGGAAATCAACAAAGTTGTTGGAGGGAATCATTGATGAATTGAAAAATCTTCATACAATTGCAAACAAGATCGGAGTGTATGGTATTGGAGGGGTGGGAAAGACCACACTGGTGGAAGAAGTTGTTAGGCAAGTTATGAAAGATAAGCTATTTGATGATGTAGTCATAGTTCGAGATGTGAAAGAAAATCCAGATATTGGAAGAATTCAAAAAGAAATTGCTGAAAGGTTTGGTATGGATTCCAATGCTCTGGAAAATCAATCTATAGCTGAAAAGGCACGTCGGATATGTGGAAGGATAAAAAACAATAAGACACTTGTTGTTTTAGATGATATATGGAATTTCTTTGATCTAAAAGTTGTGGGACTACCCGATGTGGCAACTTGTAAAATACTAATGACATCTAGAAGTCTAGAAGTATTATCTGTTAGTATGGGTACACAAAAAGAGTTTCAGCTTGCCGCCTTAGAAGAACAGGAATGTTGGAGTTTATTTGAAAGCAAGCTGGGTGATGTTGTTAGAGATCCCAAGATACTAACTGTAGCAACCCAAGTAGCCAAAAAATGTGGTGGTTTGCCAATTTTGGTTGTCACAATTGCAAGTGCGTTAAAAAAAGGTACTCTACCCGAGTGGGAGGATGCTCTGAGACGCCTTGAAACGTTTCAGAATACAGGATCAATCAAACAAGCATTCTTGGCTCTAGAGTGGATTTACGATAAATTGGATGATGAAGAGCTTCAGTCATTGTTCTTACTGTCTGGAGTTACAACATGGGAGAACTCCATCTTTCTCGATGACTTATTGAAACTTGCAGTGGGGTTGGATTTGCTTAAAGGCGTTAACACAATGAAAGAAGCACGAAATTCATTGCTGTCATTGGTTAAAAAGCTGAAAAATTTTTGTCTATTGCTAGACGATAATGGTGACACATCTGTTAGAATGCATGATCTTGTCAATGATGTTGCTAAGGAAATTGCATCTAGGGATCAACAACTCTTATCAGTAGCATGCGGAGCTGAGTTGAAAAATTGGCCAAAAACCTCAAAGTGCGGTAAGATCTCAATCAAATCCGACAGTCTCGCTAAACTTTCTGAAGTTTTGGAATGCCAAAAATTAGAAATGTTCCATCTGCATTGTGAAGACGAGCAACCACTCCAAGTCCCAAACGGTCTTTTTGCAAACATGGAAAAACTCAAAGTGTTGAGTTTAATGAATGTGAAGAATCTTGCATCTCTTGGGTTCTTGAAGAATCTTCAGGCTTTGTGTTTAGATCGATGCGAGATGGAAGACATAGCTGTAGTTGGAGAGCTAAGGAAATTAGAAATTCTCAGTTTGGGATACACCAATATGAAACAACTGCCTAAAGAAATTGGAGAATTGACTTGTCTACGATTGTTGGATTTGACCCGTTGCTATTCCCTTCAAGTGATTGCACCTAATGTTTTATCAAGGTTGACGAGACTAGAAGACTTGAGAATGAGAAACAGCTCTATCAAATGGGAGGCTGAACAGGAAGGTGAAAGAAGTAATGCTAGTCTCTCGGAGCTGAAGCACTTGTCTCTACTAACTGCATTGGAAATAAATATTCCAAATCCTGGTATGCTTCCAAAGGACTTGTTCTCCGATAAATTAGAAAGATTCCATATATGCATTGGCGATCACTCTTGGGAAGGATGGGGCATAAATACATTGAGACTCCAGTTCACTACTGGCGACGAATTGGACCAAGGTCTAAAGATGTTGGTGAAGGGATCTGAATATTTGACTTTACAAGGGGGAGCGAATGTTAATGAAACTGCCTTTGGATTAGAAGGCGACAATTTTCGGCAATTAAAGCATCTTCAACTCAGGAAACTAGATACTACATACATCATTAATTCGAAGTTTGTGTTTTCCAGTTTAACAACCTTGGAAGTGACTGACTGTGATGGTATAAAATTCTTGTTCTCGTCTTCAATGGCCAGAAGTCTAATTCAACTCAAAACTCTCACCATAAGTCGATGTAGAAGCATGGTGGTGATAGTATCCACACAAGAAGACGACGAAGAAAACAATATAGTTAACATGTTTTATAGACTAGAATTTCTGACATTAAGAGAGCTTCCAAGCTTGGTTGGATTCTGCTCAGGAAGTTATGTTGGATTTTCATCATTAGAGGAGGCACTCATATCTAATGGTCAGAGTAAAAGTACTACAATCACGAAAGAAATTGAAGATGGAGACTCGAAGGATCACCTAGGTGTTGACAATGATGTACGTTACTTTCTTTTTGATGAAAAGGTAACATTTCCTAGCTTGGAGAGATTACGGCTCGAAGAGCTACCTAAGTTGGAGGCAGTATGGCATAACCAACTTGCTCCAGACTCTTTTTGCAGGATTATAAAAGTTAGAGTTGACAGTTGCCCCAGTTTAATAAAACTCTTTGTGCCTTGTATCATGGAAAGATTAGATGCTCTAAAAACCTTGAGGGTGTGGTCCTGCCCGTTACTAGAAGTGGTATTCAAATGTGGAAGACTAAAATTTAAAGAGACACATGACCCATCAACCAAAGAGTTGAAAACTTTCAACTGCTGTCCCAATCTAGAAAAATTTAGCATACAATGCTCTGACGGATTGAAATACATTTTTCAGACAGAAGATAGGCTGGAAATTGTGCCAAAGTTTGTGTTCCCAAAAGTAACAAAACTTTTGCTTTTGAACCTGCCCCAATTCAAGAGCATCTATCCGGGGACGCATGTTTCACAGTGGCCTTCACTCCAAGAGTTGAATGTGGATAAATGTGGTGAAGTAGAGATTATAGCCGGGGAACTTTCAGTCTATCAAGAAAAACAAGAGTCTCCCTCTCACTCTAATCCAATCGGAAAACCTCTCATTTTAGTTGAGAAGGTTGTGTTTTCCAGTTTAACAACCTTGAATGTGGCTGGATGTCATGGTGTAAAATTCTTGTTCTCGCCTTCAATGGCCAGAAGTCTAGTTCAACTCAGAACTGTCACCATAAGTCGATGTAGAAGCATGGTGGTGATAGTATCCACACAAGAAGACGACGAAGAAAATAATATAGTTAACATGTTCTCTAAACTAGAATCTCTGACATTAAGAGAGCTTCCAAGCTTGGTTGGATTCTGCTCAGGAAGTTATGTTAGATTTTCATCATTAGAGGAGGCACTCATATCTAATGGTCAGAGTAAAAGTACTACAATCACGAAAGAAATTGAAGATGGAGACTCGAAGGATCACCTAGGAGTTGACAATGCTGTACGTTACTTTCTTTTTGATGAAAAGGTAACATTTCCTAGCTTGGAGAGATTACGGCTCGAAGAGCTACCTAAGTTGGAGGCAGTATGGCATAACCAACTTGCTCCAGACTCTTTTTGCAGGATTATAAAAGTTAGAGTTGACAGTTGCCCCAGTTTAATAAAACTCTTTGTGCCTTGTATCATGGAAAGATTAGATGCTCTAAAAACCTTGAGGGTGTGGTCCTGCCCGTTACTAGAAGTGGTATTCAAATGTGGAAGACTAAAATTTAAAGAGACACATGACCCATCAACCAAAGAGTTGAAAACTTTCAACTGCTGTCCCAATCTAGAAAAATTTAGCATACAACGCTCTGACGGATTGAAATACATTTTTCAGAAGGAAGAGAGGCTGGAAACAGTGCCAAAGTTTGTGTTCCCAAAAGTAACAAAATTGTTGCTTTTGAACCTGCCCCAATTCAAGAGCATCTATCCGGGGACGCATGTTTCACAGTGGCCTTCACTCCAAGAGCTGAATGTGGAAGAATGTAGTGAAGTAGAGATTATAGCCGGGGAACTTTCAGTCTATCAAGAAAAACAAGAGTCTCCCTCTCACTCTAATCCAATCGGACAACCTCTCATTTTAGTTGAGAAGGTTGTGTTTTCCAGTTTAACAACCTTGAATGTGGCTGGATGTCATGGTGTAAAATTCTTGTTCTCGCCTTCAATGGCCAGAAGTCTAGTTCAACTCAGAACTGTCACCATAAGTCGATGTAGAAGCATGGTGGTGATAGTATCCACACAAGAAGACGACGAAGAAAATAATATAGTTAACATGTTCTCTAAACTAGAATCTCTGACATTAAGAGAGCTTCCAAGCTTGGTTGGATTCTGCTCAGGAAGTTATGTTAGATTTTCATCATTAGAGGAGGCACTCATATCTAATGGTCAGAGTAAAAGTACTACAATCACGAAAGAAATTGAAGATGGAGACTCGAAGGATCACCTAGGAGTTGACAATGCTGTACGTTACTTTCTTTTTGATGAAAAGGTAACATTTCCTAGCTTGGAGAGATTACGGCTCGAAGAGCTACCTAAGTTGGAGGCAGTATGGCATAACCAACTTGCTCCAGACTCTTTTTGCAGGATTATAAAAGTTAGAGTTGACAGTTGCCCCAGTTTAATAAAACTCTTTGTGCCTTGTATCATGGAAAGATTAGATGCTCTAAAAACCTTGAGGGTGTGGTCCTGCCCGTTACTAGAAGTGGTATTCAAATGTGGAAGACTAAAATTTAAAGAGACACATGACCCATCAACCAAAGAGTTGAAAACTTTCAACTGCTGTCCCAATCTAGAAAAATTTAGCATACAACGCTCTGACGGATTGAAATACATTTTTCAGAAGGAAGAGAGGCTGGAAACAGTGCCAAAGTTTGTGTTCCCAAAAGTAACAAAATTGTTGCTTTTGAACCTGCCCCAATTCAAGAGCATCTATCCGGGGACGCATGTTTCACAGTGGCCTTCACTCCAAGAGCTGAATGTGGAAGAATGTGGTGAAGTAGAGATTATAGCCGGGGAACTTTCAGTCTATCAAGAAAAACAAGAGTCTCCCTCTCACTCTAATCCAATCGGACAACCTCTCATTTTAGTTGAGAAGGTTGTGTTTTCCAGTTTAACAACCTTGAATGTGGCTGGATGTCATGGTGTAAAATTCTTATTCTCGCCTTCAATGGCCAGAAGTCTAGTTCAACTCAGAACTGTCACCATAAGTCGATGTAGAAGCATGGTGGTGATAGTATCCACACAAGAAGACGACGAAGAAAATAATATAGTTAACATGTTCTCTAAACTAGAATCTCTGACATTAAGAGAGCTTCCAAGCTTGGTTGGATTCTGCTCAGGAAGTTATGCTGGATTTTCATCATTAGAGGAGACACTCATATCTAATGGTCAGAGTAAAAGTACTACAATCACGAAAGAAATTGAAGATGGAGACTCGAAGGATCACCTAGGTGTTGATAATGCTGTACGTTACTTTCTTTTTGATGAAAAGGTAACATTTCCTAGCTTGGAGAGATTATGGCTCGACGAGCTTCCTAAGTTAGAGGCAGTATGGCAAAACCAACTTGCTCCAGACTCTTTTTGCAGGATTAGAGAAGTTATAGTTGACAGTTGCCCCAGTTTAATAAATCTCTGTGTGCCTTTTATCACGGAAAGATTAGATGCTCTAAAAACCTTGATGGTGTGGTCCTGCCCGTCACTAGAAGTGGTATTCAAATGCGGAGCACTAAAATTTAAAGAAACACATGACCCATCAACCAAAGAGTTGAAAACTTTCAACTGCTGTCCCAATCTAGAATATTTTAGCATAGAACGCTCTGACGGATTGAAATACATTTTTCAGAAGGAAGAGAGGCTGGAAACAGTGCCAAAGTTTGTGTTCCCAAAAGTAACAAAATTGTTGCTTTGCAACCTGCCCCAATTCAAGAGCATCTATCCAGGGACGCATGTTTCACAGTGGCCTTCACTCCAAGAGCTGAATGTGGAAGAATGTGGTGAAGTAAAGATTATAGCCGGGGAATTTTCTGTTTATCAAGAAAAACAAGAGTCTGCCTCTCACTCTAATCCAATCGAACAACCTCTCATTTTAATTGAGAAGGGTTCATCACTCTTTCCCAGCTTGGAAACTTTGACCTTGGGGGCCATAGAGATGTGGAGTGGTCCACCCCCAGCGCAGTTCTGTAGCAAAGTGAAATTGGTTGTAGTTCGTGGCGCAACCTTCTCCAAGCACGCTACTTTCCTTCAGAGATTACACAATCTTGAAAAAATTATTGTGGAGGACATGGGAGACACGGATCCTTGCAGAGAAACATTTGTGGATGCAGGAAATAGTGGAGGGGAAATTCAAGTAAGAAAATTGACGATCAGATTTATGGACAAACTTATGCAAATCGGGAAGGTGAGCTCTCAATCAGCAGTTCCAGTTTTCCCAAAATTGGAGAAACTCCGGGTTTGGTGGTGTTCCAGATTAAAGAATCTAGATTCATCCACAATATCCTTCCAGAATCTGACATCGTTGACTACGGATGAAGAAGCTGTTGATATTTCCGAGGAAGCAATCAAGCAAAAAGAAGAAGATAAAGTGCTTTTGAAGATAGAAGACAGCTCCAAGAATGAAAAGCCGAAATCTTCTTCTCAACCTGAACATCATCATCATGATGCACCTGAGGATGGAGAAGGAGACAATCACGAGTTCGTTAAGGTCCTCACTACCTCGATTGCCATTTTGATCAGCTGCGTCGTTGTTTTTGTGTGGCGGGGATCGAGTGCTCAGAAGCCCAGGGTTGTCCAGCCTCTTAAGCTGTTGATCATCACGGCGCCTGAGCCGGAGCTTGACGATGGAAATAAGAAGATCACAATCTTCTTCGGCACGCAAACCGGTACTGCTGAGGGATTTGCCAAGGCTTTGGCTGAAGATGCAAAAGCTCGCTACGATAAGGTCACATTCAAAGTTGTTGATTTGGATGACTATGCAGCTGATGACGAGGCGTATGAGGAGAAATTGAAAAATGAGAGTTTGGCAATTTTCTTTATGGCGACATATGGTGATGGTGAGCTGACGGATAATGCTGCTAGATTTTACAAGTGGTTTACAGAGGATAAAGAGAAAGAAGCATGGCTTCAAAATATTCAATGCGGAGTATTTGGTCATGGGAACAGGCAGTATGAACATTTCAATAAGGTGGCCGTGGTTGTGGATGAGATCCTCGCTGTTCAAGGTTGGAGCTGTTGTTGGATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

2454

Amino Acids

277.3

Weight (kDa)

5.63

Isoelectric Point (pI)

40.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 116 - 279 1.8e-28 NB-ARC domain
LRR_14 PF23598 476 - 750 4.8e-08 Leucine-rich repeat region
LRR_RPS2 PF23247 721 - 829 7.9e-12 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 872 - 937 6e-11 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1070 - 1168 3.5e-10 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1206 - 1271 6.2e-11 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1404 - 1501 3.8e-10 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1540 - 1605 6.2e-11 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1738 - 1827 3.4e-10 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1874 - 1939 2e-08 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 2091 - 2215 7.3e-06 Plant disease resistance protein RPS2-like, leucine-rich repeats
Flavodoxin_1 PF00258 2328 - 2448 8e-23 Flavodoxin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 2711, 3713, 4715
Acc36I ACCTGC 4 cut(s) 3039, 4041, 5043, 6045
AccB1I GGYRCC 1 cut(s) 6940
AccB7I CCANNNNNTGG 2 cut(s) 527, 1925
AccBSI CCGCTC 1 cut(s) 145
AccI GTMKAC 1 cut(s) 1717
AciI CCGC 7 cut(s) 145, 792, 1341, 1380, 5844, 6880, 7260
AclI AACGTT 1 cut(s) 989
AcoI YGGCCR 6 cut(s) 1361, 2289, 3291, 4293, 5295, 7308
AcuI CTGAAG 7 cut(s) 149, 1052, 1443, 1568, 1898, 6350, 7056
AcyI GRCGYC 2 cut(s) 979, 6941
AfiI CCNNNNNNNGG 5 cut(s) 144, 527, 1925, 6559, 6794
AflII CTTAAG 1 cut(s) 6920
AflIII ACRYGT 4 cut(s) 2394, 3396, 4398, 5400
AgeI ACCGGT 1 cut(s) 7001
AjiI CACGTC 1 cut(s) 611
AjnI CCWGG 4 cut(s) 63, 1924, 6061, 6902
AjuI GAANNNNNNNTTGG 2 cut(s) 2115, 2147
AleI CACNNNNGTG 3 cut(s) 440, 2568, 5574
Alw21I GWGCWC 3 cut(s) 5851, 6530, 6895
AlwNI CAGNNNCTG 2 cut(s) 23, 6631
Ama87I CYCGRG 2 cut(s) 114, 956
ApeKI GCWGC 4 cut(s) 167, 6858, 7097, 7193
AseI ATTAAT 1 cut(s) 2205
AsiGI ACCGGT 1 cut(s) 7001
Asp700I GAANNNNTTC 6 cut(s) 990, 1065, 2891, 3893, 4895, 5897
AspA2I CCTAGG 4 cut(s) 2566, 3568, 4570, 5572
AspLEI GCGC 3 cut(s) 6298, 6338, 6943
AspS9I GGNCC 8 cut(s) 2053, 2805, 3807, 4809, 5811, 6264, 6284, 6826
AsuC2I CCSGG 8 cut(s) 3057, 3133, 4059, 4135, 5061, 5137, 6139, 6572
AsuII TTCGAA 1 cut(s) 2210
AvaI CYCGRG 2 cut(s) 114, 956
AvaII GGWCC 7 cut(s) 2053, 2805, 3807, 4809, 5811, 6284, 6826
AvrII CCTAGG 4 cut(s) 2566, 3568, 4570, 5572
AxyI CCTNAGG 1 cut(s) 6789
BalI TGGCCA 5 cut(s) 1363, 2291, 3293, 4295, 5297
BamHI GGATCC 1 cut(s) 6418
BanI GGYRCC 1 cut(s) 6940
BanII GRGCYC 1 cut(s) 6530
BauI CACGAG 1 cut(s) 6812
Bbv12I GWGCWC 3 cut(s) 5851, 6530, 6895
BbvCI CCTCAGC 1 cut(s) 7011
BbvI GCAGC 4 cut(s) 179, 6845, 7109, 7180
BceAI ACGGC 5 cut(s) 2654, 3656, 4658, 6954, 7295
BciT130I CCWGG 4 cut(s) 65, 1926, 6063, 6904
BciVI GTATCC 5 cut(s) 1661, 2365, 3367, 4369, 5371
BclI TGATCA 2 cut(s) 6852, 6930
BcnI CCSGG 8 cut(s) 3057, 3133, 4059, 4135, 5061, 5137, 6139, 6572
BfmI CTRYAG 6 cut(s) 15, 107, 594, 870, 1626, 6304
BfoI RGCGCY 1 cut(s) 6944
BfrI CTTAAG 1 cut(s) 6920
BfuAI ACCTGC 4 cut(s) 3039, 4041, 5043, 6045
BfuI GTATCC 5 cut(s) 1661, 2365, 3367, 4369, 5371
BglII AGATCT 1 cut(s) 1386
BisI GCNGC 5 cut(s) 168, 792, 6859, 7098, 7194
BlnI CCTAGG 4 cut(s) 2566, 3568, 4570, 5572
BlpI GCTNAGC 1 cut(s) 326
BlsI GCNGC 5 cut(s) 169, 793, 6860, 7099, 7195
BmcAI AGTACT 4 cut(s) 2521, 3523, 4525, 5527
Bme18I GGWCC 7 cut(s) 2053, 2805, 3807, 4809, 5811, 6284, 6826
BmeT110I CYCGRG 2 cut(s) 114, 956
BmgBI CACGTC 1 cut(s) 611
BmgT120I GGNCC 8 cut(s) 2053, 2805, 3807, 4809, 5811, 6264, 6284, 6826
BmiI GGNNCC 3 cut(s) 6265, 6420, 6942
BmrI ACTGGG 4 cut(s) 2730, 3732, 4734, 5736
BmuI ACTGGG 4 cut(s) 2730, 3732, 4734, 5736
BoxI GACNNNNGTC 1 cut(s) 2058
BplI GAGNNNNNCTC 8 cut(s) 3155, 3187, 4157, 4189, 5159, 5191, 6161, 6193
BpmI CTGGAG 6 cut(s) 1110, 2012, 2673, 3675, 4677, 5679
Bpu10I CCTNAGC 8 cut(s) 1296, 1640, 2455, 3457, 4459, 5461, 6945, 7011
Bpu1102I GCTNAGC 1 cut(s) 326
Bpu14I TTCGAA 1 cut(s) 2210
BpuEI CTTGAG 4 cut(s) 1822, 2815, 3817, 4819
BpuMI CCSGG 8 cut(s) 3057, 3133, 4059, 4135, 5061, 5137, 6139, 6572
Bsa29I ATCGAT 1 cut(s) 1603
BsaBI GATNNNNATC 6 cut(s) 1391, 2476, 3478, 4480, 5482, 6980
BsaHI GRCGYC 2 cut(s) 979, 6941
BsaI GGTCTC 1 cut(s) 224
BsaWI WCCGGW 1 cut(s) 7001
BsaXI ACNNNNNCTCC 5 cut(s) 1934, 1964, 2100, 2130, 7339
Bsc4I CCNNNNNNNGG 5 cut(s) 144, 527, 1925, 6559, 6794
Bse118I RCCGGY 1 cut(s) 7001
Bse21I CCTNAGG 1 cut(s) 6789
Bse3DI GCAATG 1 cut(s) 1196
Bse8I GATNNNNATC 6 cut(s) 1391, 2476, 3478, 4480, 5482, 6980
BseBI CCWGG 4 cut(s) 65, 1926, 6063, 6904
BseCI ATCGAT 1 cut(s) 1603
BseJI GATNNNNATC 6 cut(s) 1391, 2476, 3478, 4480, 5482, 6980
BseLI CCNNNNNNNGG 5 cut(s) 144, 527, 1925, 6559, 6794
BseMI GCAATG 1 cut(s) 1196
BseRI GAGGAG 6 cut(s) 195, 2501, 3503, 4505, 5507, 7133
BseXI GCAGC 4 cut(s) 179, 6845, 7109, 7180
BseYI CCCAGC 3 cut(s) 835, 6239, 6292
BshNI GGYRCC 1 cut(s) 6940
BshTI ACCGGT 1 cut(s) 7001
BshVI ATCGAT 1 cut(s) 1603
BsiHKAI GWGCWC 3 cut(s) 5851, 6530, 6895
BsiHKCI CYCGRG 2 cut(s) 114, 956
BslI CCNNNNNNNGG 5 cut(s) 144, 527, 1925, 6559, 6794
BsmBI CGTCTC 1 cut(s) 970
BsmI GAATGC 3 cut(s) 1019, 1275, 1439
Bso31I GGTCTC 1 cut(s) 224
BsoBI CYCGRG 2 cut(s) 114, 956
Bsp119I TTCGAA 1 cut(s) 2210
Bsp1286I GDGCHC 3 cut(s) 5851, 6530, 6895
Bsp1720I GCTNAGC 1 cut(s) 326
BspACI CCGC 7 cut(s) 145, 792, 1341, 1380, 5844, 6880, 7260
BspDI ATCGAT 1 cut(s) 1603
BspHI TCATGA 1 cut(s) 6778
BspLI GGNNCC 3 cut(s) 6265, 6420, 6942
BspMAI CTGCAG 1 cut(s) 19
BspMI ACCTGC 4 cut(s) 3039, 4041, 5043, 6045
BspQI GCTCTTC 4 cut(s) 1056, 2640, 3642, 4644
BspT104I TTCGAA 1 cut(s) 2210
BspT107I GGYRCC 1 cut(s) 6940
BspTI CTTAAG 1 cut(s) 6920
BspTNI GGTCTC 1 cut(s) 224
BsrBI CCGCTC 1 cut(s) 145
BsrDI GCAATG 1 cut(s) 1196
BsrFI RCCGGY 1 cut(s) 7001
BssAI RCCGGY 1 cut(s) 7001
BssNI GRCGYC 2 cut(s) 979, 6941
BssSI CACGAG 1 cut(s) 6812
BssT1I CCWWGG 9 cut(s) 289, 2056, 2238, 2566, 3568, 4570, 5572, 6258, 7023
Bst2BI CACGAG 1 cut(s) 6812
Bst2UI CCWGG 4 cut(s) 65, 1926, 6063, 6904
Bst6I CTCTTC 9 cut(s) 167, 172, 1056, 2640, 3642, 3963, 4644, 4965, 5967
BstACI GRCGYC 2 cut(s) 979, 6941
BstAFI CTTAAG 1 cut(s) 6920
BstAPI GCANNNNNTGC 1 cut(s) 2931
BstBI TTCGAA 1 cut(s) 2210
BstC8I GCNNGC 6 cut(s) 789, 833, 1339, 6354, 6995, 7051
BstDSI CCRYGG 1 cut(s) 7311
BstH2I RGCGCY 1 cut(s) 6944
BstHHI GCGC 3 cut(s) 6298, 6338, 6943
BstNI CCWGG 4 cut(s) 65, 1926, 6063, 6904
BstNSI RCATGY 9 cut(s) 1341, 2398, 3068, 3400, 4070, 4402, 5072, 5404, 6074
BstPAI GACNNNNGTC 1 cut(s) 2058
BstSFI CTRYAG 6 cut(s) 15, 107, 594, 870, 1626, 6304
BstV1I GCAGC 4 cut(s) 179, 6845, 7109, 7180
BstX2I RGATCY 5 cut(s) 853, 1386, 2081, 6418, 7326
BstXI CCANNNNNNTGG 3 cut(s) 442, 580, 7030
BstYI RGATCY 5 cut(s) 853, 1386, 2081, 6418, 7326
Bsu15I ATCGAT 1 cut(s) 1603
Bsu36I CCTNAGG 1 cut(s) 6789
BsuI GTATCC 5 cut(s) 1661, 2365, 3367, 4369, 5371
BsuTUI ATCGAT 1 cut(s) 1603
BtgI CCRYGG 1 cut(s) 7311
BtrI CACGTC 1 cut(s) 611
BtsI GCAGTG 1 cut(s) 1149
BveI ACCTGC 4 cut(s) 3039, 4041, 5043, 6045
Cac8I GCNNGC 6 cut(s) 789, 833, 1339, 6354, 6995, 7051
CaiI CAGNNNCTG 2 cut(s) 23, 6631
CciI TCATGA 1 cut(s) 6778
CfoI GCGC 3 cut(s) 6298, 6338, 6943
Cfr10I RCCGGY 1 cut(s) 7001
Cfr13I GGNCC 8 cut(s) 2053, 2805, 3807, 4809, 5811, 6264, 6284, 6826
ClaI ATCGAT 1 cut(s) 1603
CseI GACGC 6 cut(s) 987, 3070, 4072, 5074, 6076, 6850
CspAI ACCGGT 1 cut(s) 7001
CspCI CAANNNNNGTGG 2 cut(s) 877, 912
DinI GGCGCC 1 cut(s) 6942
DraI TTTAAA 4 cut(s) 2854, 3856, 4858, 5860
EaeI YGGCCR 6 cut(s) 1361, 2289, 3291, 4293, 5295, 7308
Eam1104I CTCTTC 9 cut(s) 167, 172, 1056, 2640, 3642, 3963, 4644, 4965, 5967
EarI CTCTTC 9 cut(s) 167, 172, 1056, 2640, 3642, 3963, 4644, 4965, 5967
Ecl136II GAGCTC 1 cut(s) 6528
Eco130I CCWWGG 9 cut(s) 289, 2056, 2238, 2566, 3568, 4570, 5572, 6258, 7023
Eco24I GRGCYC 1 cut(s) 6530
Eco31I GGTCTC 1 cut(s) 224
Eco47I GGWCC 7 cut(s) 2053, 2805, 3807, 4809, 5811, 6284, 6826
Eco53kI GAGCTC 1 cut(s) 6528
Eco57I CTGAAG 7 cut(s) 149, 1052, 1443, 1568, 1898, 6350, 7056
Eco81I CCTNAGG 1 cut(s) 6789
Eco88I CYCGRG 2 cut(s) 114, 956
EcoICRI GAGCTC 1 cut(s) 6528
EcoO109I RGGNCCY 1 cut(s) 6826
EcoRI GAATTC 1 cut(s) 534
EcoRII CCWGG 4 cut(s) 63, 1924, 6061, 6902
EcoT14I CCWWGG 9 cut(s) 289, 2056, 2238, 2566, 3568, 4570, 5572, 6258, 7023
EcoT22I ATGCAT 2 cut(s) 1275, 1982
EcoT38I GRGCYC 1 cut(s) 6530
EgeI GGCGCC 1 cut(s) 6942
EheI GGCGCC 1 cut(s) 6942
ErhI CCWWGG 9 cut(s) 289, 2056, 2238, 2566, 3568, 4570, 5572, 6258, 7023
Esp3I CGTCTC 1 cut(s) 970
FalI AAGNNNNNCTT 2 cut(s) 7227, 7259
FauI CCCGC 2 cut(s) 138, 6873
FauNDI CATATG 1 cut(s) 7165
FbaI TGATCA 2 cut(s) 6852, 6930
FblI GTMKAC 1 cut(s) 1717
Fnu4HI GCNGC 5 cut(s) 168, 792, 6859, 7098, 7194
FriOI GRGCYC 1 cut(s) 6530
Fsp4HI GCNGC 5 cut(s) 168, 792, 6859, 7098, 7194
GlaI GCGC 3 cut(s) 6297, 6337, 6942
GluI GCNGC 5 cut(s) 168, 792, 6859, 7098, 7194
GsaI CCCAGC 3 cut(s) 839, 6243, 6296
GsuI CTGGAG 6 cut(s) 1110, 2012, 2673, 3675, 4677, 5679
HaeII RGCGCY 1 cut(s) 6944
HgaI GACGC 6 cut(s) 987, 3070, 4072, 5074, 6076, 6850
HhaI GCGC 3 cut(s) 6298, 6338, 6943
Hin1I GRCGYC 2 cut(s) 979, 6941
Hin6I GCGC 3 cut(s) 6296, 6336, 6941
HinP1I GCGC 3 cut(s) 6296, 6336, 6941
HindIII AAGCTT 4 cut(s) 2437, 3439, 4441, 5443
HpaI GTTAAC 5 cut(s) 1171, 2392, 3394, 4396, 5398
Hpy99I CGWCG 8 cut(s) 615, 2048, 2375, 3377, 4379, 5381, 5654, 6866
HpyCH4IV ACGT 6 cut(s) 610, 989, 2587, 3589, 4591, 5593
HpySE526I ACGT 6 cut(s) 610, 989, 2587, 3589, 4591, 5593
Hsp92I GRCGYC 2 cut(s) 979, 6941
HspAI GCGC 3 cut(s) 6296, 6336, 6941
KasI GGCGCC 1 cut(s) 6940
Ksp22I TGATCA 2 cut(s) 6852, 6930
KspAI GTTAAC 5 cut(s) 1171, 2392, 3394, 4396, 5398
LguI GCTCTTC 4 cut(s) 1056, 2640, 3642, 4644
Lsp1109I GCAGC 4 cut(s) 179, 6845, 7109, 7180
MaeII ACGT 6 cut(s) 610, 989, 2587, 3589, 4591, 5593
MbiI CCGCTC 1 cut(s) 145
MfeI CAATTG 2 cut(s) 387, 924
MflI RGATCY 5 cut(s) 853, 1386, 2081, 6418, 7326
MhlI GDGCHC 3 cut(s) 5851, 6530, 6895
MlsI TGGCCA 5 cut(s) 1363, 2291, 3293, 4295, 5297
MluNI TGGCCA 5 cut(s) 1363, 2291, 3293, 4295, 5297
Mly113I GGCGCC 1 cut(s) 6941
Mox20I TGGCCA 5 cut(s) 1363, 2291, 3293, 4295, 5297
Mph1103I ATGCAT 2 cut(s) 1275, 1982
MroXI GAANNNNTTC 6 cut(s) 990, 1065, 2891, 3893, 4895, 5897
MscI TGGCCA 5 cut(s) 1363, 2291, 3293, 4295, 5297
Msp20I TGGCCA 5 cut(s) 1363, 2291, 3293, 4295, 5297
MspA1I CMGCKG 2 cut(s) 6858, 7100
MspCI CTTAAG 1 cut(s) 6920
MunI CAATTG 2 cut(s) 387, 924
Mva1269I GAATGC 3 cut(s) 1019, 1275, 1439
MvaI CCWGG 4 cut(s) 65, 1926, 6063, 6904
NarI GGCGCC 1 cut(s) 6941
NciI CCSGG 8 cut(s) 3057, 3133, 4059, 4135, 5061, 5137, 6139, 6572
NdeI CATATG 1 cut(s) 7165
NlaIV GGNNCC 3 cut(s) 6265, 6420, 6942
NmeAIII GCCGAG 1 cut(s) 61
NmuCI GTSAC 8 cut(s) 919, 1253, 2245, 3319, 4321, 5323, 5820, 7063
NsiI ATGCAT 2 cut(s) 1275, 1982
NspI RCATGY 9 cut(s) 1341, 2398, 3068, 3400, 4070, 4402, 5072, 5404, 6074
NspV TTCGAA 1 cut(s) 2210
OliI CACNNNNGTG 3 cut(s) 440, 2568, 5574
PaeI GCATGC 1 cut(s) 1341
PaeR7I CTCGAG 1 cut(s) 114
PagI TCATGA 1 cut(s) 6778
PasI CCCWGGG 1 cut(s) 6903
PciI ACATGT 4 cut(s) 2394, 3396, 4398, 5400
PciSI GCTCTTC 4 cut(s) 1056, 2640, 3642, 4644
PctI GAATGC 3 cut(s) 1019, 1275, 1439
PdmI GAANNNNTTC 6 cut(s) 990, 1065, 2891, 3893, 4895, 5897
PflMI CCANNNNNTGG 2 cut(s) 527, 1925
PinAI ACCGGT 1 cut(s) 7001
PkrI GCNGC 5 cut(s) 169, 793, 6860, 7099, 7195
PluTI GGCGCC 1 cut(s) 6944
PpuMI RGGWCCY 1 cut(s) 6826
PscI ACATGT 4 cut(s) 2394, 3396, 4398, 5400
PshAI GACNNNNGTC 1 cut(s) 2058
PshBI ATTAAT 1 cut(s) 2205
PsiI TTATAA 3 cut(s) 2711, 3713, 4715
Psp124BI GAGCTC 1 cut(s) 6530
Psp1406I AACGTT 1 cut(s) 989
Psp5II RGGWCCY 1 cut(s) 6826
Psp6I CCWGG 4 cut(s) 63, 1924, 6061, 6902
PspFI CCCAGC 3 cut(s) 835, 6239, 6292
PspGI CCWGG 4 cut(s) 63, 1924, 6061, 6902
PspN4I GGNNCC 3 cut(s) 6265, 6420, 6942
PspPI GGNCC 8 cut(s) 2053, 2805, 3807, 4809, 5811, 6264, 6284, 6826
PspPPI RGGWCCY 1 cut(s) 6826
PspXI VCTCGAGB 1 cut(s) 114
PsrI GAACNNNNNNTAC 4 cut(s) 42, 74, 483, 515
PstI CTGCAG 1 cut(s) 19
PstNI CAGNNNCTG 2 cut(s) 23, 6631
PsuI RGATCY 5 cut(s) 853, 1386, 2081, 6418, 7326
PvuII CAGCTG 2 cut(s) 6858, 7100
SacI GAGCTC 1 cut(s) 6530
SapI GCTCTTC 4 cut(s) 1056, 2640, 3642, 4644
SatI GCNGC 5 cut(s) 168, 792, 6859, 7098, 7194
Sau96I GGNCC 8 cut(s) 2053, 2805, 3807, 4809, 5811, 6264, 6284, 6826
ScaI AGTACT 4 cut(s) 2521, 3523, 4525, 5527
SduI GDGCHC 3 cut(s) 5851, 6530, 6895
SfcI CTRYAG 6 cut(s) 15, 107, 594, 870, 1626, 6304
SfoI GGCGCC 1 cut(s) 6942
Sfr274I CTCGAG 1 cut(s) 114
SfuI TTCGAA 1 cut(s) 2210
SinI GGWCC 7 cut(s) 2053, 2805, 3807, 4809, 5811, 6284, 6826
SlaI CTCGAG 1 cut(s) 114
SmlI CTYRAG 6 cut(s) 114, 1801, 2794, 3796, 4798, 6920
SmoI CTYRAG 6 cut(s) 114, 1801, 2794, 3796, 4798, 6920
SphI GCATGC 1 cut(s) 1341
SsiI CCGC 7 cut(s) 145, 792, 1341, 1380, 5844, 6880, 7260
SspDI GGCGCC 1 cut(s) 6940
SspI AATATT 4 cut(s) 1915, 2090, 5924, 7252
SstI GAGCTC 1 cut(s) 6530
StyI CCWWGG 9 cut(s) 289, 2056, 2238, 2566, 3568, 4570, 5572, 6258, 7023
TaiI ACGT 6 cut(s) 613, 992, 2590, 3592, 4594, 5596
TatI WGTACW 4 cut(s) 2519, 3521, 4523, 5525
TauI GCSGC 1 cut(s) 794
TseFI GTSAC 8 cut(s) 919, 1253, 2245, 3319, 4321, 5323, 5820, 7063
TseI GCWGC 4 cut(s) 167, 6858, 7097, 7193
Tsp45I GTSAC 8 cut(s) 919, 1253, 2245, 3319, 4321, 5323, 5820, 7063
TspGWI ACGGA 8 cut(s) 2955, 3957, 4959, 5789, 5961, 6431, 6662, 7199
Van91I CCANNNNNTGG 2 cut(s) 527, 1925
Vha464I CTTAAG 1 cut(s) 6920
VpaK11BI GGWCC 7 cut(s) 2053, 2805, 3807, 4809, 5811, 6284, 6826
VspI ATTAAT 1 cut(s) 2205
XbaI TCTAGA 8 cut(s) 734, 742, 1030, 2911, 3913, 4915, 5917, 6601
XceI RCATGY 9 cut(s) 1341, 2398, 3068, 3400, 4070, 4402, 5072, 5404, 6074
XcmI CCANNNNNNNNNTGG 2 cut(s) 1979, 2036
XhoI CTCGAG 1 cut(s) 114
XmaJI CCTAGG 4 cut(s) 2566, 3568, 4570, 5572
XmiI GTMKAC 1 cut(s) 1717
XmnI GAANNNNTTC 6 cut(s) 990, 1065, 2891, 3893, 4895, 5897
ZrmI AGTACT 4 cut(s) 2521, 3523, 4525, 5527
Zsp2I ATGCAT 2 cut(s) 1275, 1982
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.