disease resistance
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NB-ARC | PF00931 | 190 - 353 | 1.9e-26 | NB-ARC domain |
| LRR_14 | PF23598 | 553 - 858 | 1.8e-12 | Leucine-rich repeat region |
| LRR_RPS2 | PF23247 | 823 - 907 | 2e-09 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
| LRR_RPS2 | PF23247 | 957 - 1040 | 4.7e-12 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
| LRR_RPS2 | PF23247 | 1053 - 1148 | 1.7e-07 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
| LRR_RPS2 | PF23247 | 1181 - 1320 | 1.2e-06 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
| LRR_RPS2 | PF23247 | 1315 - 1405 | 2.9e-10 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 1793 |
| Acc16I | TGCGCA | 1 cut(s) | 983 |
| Acc36I | ACCTGC | 1 cut(s) | 1666 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 3164 |
| AccI | GTMKAC | 1 cut(s) | 952 |
| AccII | CGCG | 2 cut(s) | 3560, 3654 |
| AclI | AACGTT | 2 cut(s) | 1832, 2330 |
| AclWI | GGATC | 5 cut(s) | 515, 1778, 2374, 2628, 2771 |
| AcoI | YGGCCR | 3 cut(s) | 364, 1987, 3410 |
| AcsI | RAATTY | 4 cut(s) | 350, 2744, 2852, 3478 |
| AcuI | CTGAAG | 4 cut(s) | 2427, 2585, 3683, 4308 |
| AcyI | GRCGYC | 2 cut(s) | 1198, 1790 |
| AdeI | CACNNNGTG | 1 cut(s) | 166 |
| AfaI | GTAC | 9 cut(s) | 94, 140, 759, 1656, 1697, 3431, 3581, 3990, 4013 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 3164, 3902 |
| AflIII | ACRYGT | 3 cut(s) | 1540, 3346, 3432 |
| AjiI | CACGTC | 2 cut(s) | 1543, 3347 |
| AjnI | CCWGG | 4 cut(s) | 236, 921, 3130, 3388 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 3151, 3183 |
| AleI | CACNNNNGTG | 1 cut(s) | 662 |
| Alw21I | GWGCWC | 4 cut(s) | 417, 826, 1610, 2295 |
| Alw26I | GTCTC | 9 cut(s) | 287, 1189, 1338, 1889, 2133, 2366, 2736, 2957, 4165 |
| Alw44I | GTGCAC | 1 cut(s) | 1606 |
| AlwI | GGATC | 5 cut(s) | 515, 1778, 2374, 2628, 2771 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1678 |
| AoxI | GGCC | 8 cut(s) | 364, 1580, 1987, 2314, 3213, 3410, 3883, 4257 |
| ApaLI | GTGCAC | 1 cut(s) | 1606 |
| ApeKI | GCWGC | 3 cut(s) | 233, 940, 1514 |
| ApoI | RAATTY | 4 cut(s) | 350, 2744, 2852, 3478 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 370, 402, 686, 718 |
| AseI | ATTAAT | 1 cut(s) | 795 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 621, 672 |
| AspLEI | GCGC | 3 cut(s) | 984, 2887, 3738 |
| AspS9I | GGNCC | 5 cut(s) | 1914, 2314, 3584, 3884, 4294 |
| AsuC2I | CCSGG | 1 cut(s) | 541 |
| AsuII | TTCGAA | 1 cut(s) | 3075 |
| AvaII | GGWCC | 3 cut(s) | 1914, 3584, 4294 |
| BaeGI | GKGCMC | 2 cut(s) | 1610, 3003 |
| BanII | GRGCYC | 2 cut(s) | 2295, 3807 |
| BauI | CACGAG | 1 cut(s) | 1407 |
| BbsI | GAAGAC | 5 cut(s) | 380, 659, 1026, 3022, 3224 |
| Bbv12I | GWGCWC | 4 cut(s) | 417, 826, 1610, 2295 |
| BbvI | GCAGC | 3 cut(s) | 220, 927, 1501 |
| BccI | CCATC | 9 cut(s) | 204, 338, 532, 712, 1042, 2357, 2777, 2795, 3595 |
| BceAI | ACGGC | 4 cut(s) | 379, 1276, 1974, 3397 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1496, 1530 |
| BciT130I | CCWGG | 4 cut(s) | 238, 923, 3132, 3390 |
| BclI | TGATCA | 4 cut(s) | 3, 1377, 2929, 4117 |
| BcnI | CCSGG | 1 cut(s) | 541 |
| BcoDI | GTCTC | 9 cut(s) | 287, 1189, 1338, 1889, 2133, 2366, 2736, 2957, 4165 |
| BfaI | CTAG | 8 cut(s) | 176, 840, 1871, 2103, 2700, 3029, 3062, 3944 |
| BfmI | CTRYAG | 3 cut(s) | 206, 1659, 3108 |
| BfuAI | ACCTGC | 1 cut(s) | 1666 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1206 |
| BglII | AGATCT | 2 cut(s) | 1972, 3828 |
| BisI | GCNGC | 8 cut(s) | 234, 367, 941, 1075, 1515, 2417, 3465, 4156 |
| BlpI | GCTNAGC | 2 cut(s) | 465, 2262 |
| BlsI | GCNGC | 8 cut(s) | 235, 368, 942, 1076, 1516, 2418, 3466, 4157 |
| BmcAI | AGTACT | 1 cut(s) | 4013 |
| Bme1390I | CCNGG | 5 cut(s) | 238, 541, 923, 3132, 3390 |
| Bme18I | GGWCC | 3 cut(s) | 1914, 3584, 4294 |
| BmgBI | CACGTC | 2 cut(s) | 1543, 3347 |
| BmgT120I | GGNCC | 5 cut(s) | 1914, 2314, 3584, 3884, 4294 |
| BmiI | GGNNCC | 3 cut(s) | 194, 746, 4295 |
| BmrFI | CCNGG | 5 cut(s) | 238, 541, 923, 3132, 3390 |
| BmrI | ACTGGG | 1 cut(s) | 2768 |
| BmsI | GCATC | 8 cut(s) | 316, 1402, 1411, 1721, 2152, 2578, 2774, 2830 |
| BmuI | ACTGGG | 1 cut(s) | 2768 |
| BoxI | GACNNNNGTC | 1 cut(s) | 4231 |
| BpiI | GAAGAC | 5 cut(s) | 380, 659, 1026, 3022, 3224 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 3938, 3970 |
| BpmI | CTGGAG | 2 cut(s) | 2176, 2309 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1901 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 465, 2262 |
| Bpu14I | TTCGAA | 1 cut(s) | 3075 |
| BpuEI | CTTGAG | 5 cut(s) | 1213, 1271, 1635, 2005, 2515 |
| BpuMI | CCSGG | 1 cut(s) | 541 |
| Bsa29I | ATCGAT | 1 cut(s) | 2643 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2153 |
| BsaHI | GRCGYC | 2 cut(s) | 1198, 1790 |
| BsaI | GGTCTC | 1 cut(s) | 1889 |
| BsaJI | CCNNGG | 4 cut(s) | 237, 2256, 2317, 3130 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2174, 2204 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 3164, 3902 |
| Bse118I | RCCGGY | 1 cut(s) | 3881 |
| Bse1I | ACTGG | 7 cut(s) | 1683, 2040, 2193, 2292, 2763, 3797, 4065 |
| Bse3DI | GCAATG | 2 cut(s) | 2311, 3745 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2153 |
| BseBI | CCWGG | 4 cut(s) | 238, 923, 3132, 3390 |
| BseCI | ATCGAT | 1 cut(s) | 2643 |
| BseDI | CCNNGG | 4 cut(s) | 237, 2256, 2317, 3130 |
| BseJI | GATNNNNATC | 1 cut(s) | 2153 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 3164, 3902 |
| BseMI | GCAATG | 2 cut(s) | 2311, 3745 |
| BseNI | ACTGG | 7 cut(s) | 1683, 2040, 2193, 2292, 2763, 3797, 4065 |
| BseRI | GAGGAG | 4 cut(s) | 257, 291, 470, 3800 |
| BseSI | GKGCMC | 2 cut(s) | 1610, 3003 |
| BseX3I | CGGCCG | 1 cut(s) | 364 |
| BseXI | GCAGC | 3 cut(s) | 220, 927, 1501 |
| BseYI | CCCAGC | 1 cut(s) | 3595 |
| BsgI | GTGCAG | 1 cut(s) | 2692 |
| Bsh1236I | CGCG | 2 cut(s) | 3560, 3654 |
| Bsh1285I | CGRYCG | 2 cut(s) | 156, 367 |
| BshFI | GGCC | 8 cut(s) | 366, 1582, 1989, 2316, 3215, 3412, 3885, 4259 |
| BshVI | ATCGAT | 1 cut(s) | 2643 |
| BsiEI | CGRYCG | 2 cut(s) | 156, 367 |
| BsiHKAI | GWGCWC | 4 cut(s) | 417, 826, 1610, 2295 |
| BsiSI | CCGG | 4 cut(s) | 123, 540, 3212, 3882 |
| BslFI | GGGAC | 2 cut(s) | 2827, 4147 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 3164, 3902 |
| BsmAI | GTCTC | 9 cut(s) | 287, 1189, 1338, 1889, 2133, 2366, 2736, 2957, 4165 |
| BsmBI | CGTCTC | 1 cut(s) | 1189 |
| BsmFI | GGGAC | 2 cut(s) | 2827, 4147 |
| BsmI | GAATGC | 3 cut(s) | 1494, 3028, 3399 |
| BsnI | GGCC | 8 cut(s) | 366, 1582, 1989, 2316, 3215, 3412, 3885, 4259 |
| Bso31I | GGTCTC | 1 cut(s) | 1889 |
| Bsp119I | TTCGAA | 1 cut(s) | 3075 |
| Bsp1286I | GDGCHC | 6 cut(s) | 417, 826, 1610, 2295, 3003, 3807 |
| Bsp1407I | TGTACA | 3 cut(s) | 92, 1695, 3429 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 465, 2262 |
| Bsp19I | CCATGG | 1 cut(s) | 2256 |
| Bsp68I | TCGCGA | 1 cut(s) | 3654 |
| BspANI | GGCC | 8 cut(s) | 366, 1582, 1989, 2316, 3215, 3412, 3885, 4259 |
| BspDI | ATCGAT | 1 cut(s) | 2643 |
| BspFNI | CGCG | 2 cut(s) | 3560, 3654 |
| BspHI | TCATGA | 1 cut(s) | 4120 |
| BspLI | GGNNCC | 3 cut(s) | 194, 746, 4295 |
| BspMAI | CTGCAG | 3 cut(s) | 210, 1663, 3112 |
| BspMI | ACCTGC | 1 cut(s) | 1666 |
| BspPI | GGATC | 5 cut(s) | 515, 1778, 2374, 2628, 2771 |
| BspT104I | TTCGAA | 1 cut(s) | 3075 |
| BspTNI | GGTCTC | 1 cut(s) | 1889 |
| BsrDI | GCAATG | 2 cut(s) | 2311, 3745 |
| BsrFI | RCCGGY | 1 cut(s) | 3881 |
| BsrGI | TGTACA | 3 cut(s) | 92, 1695, 3429 |
| BsrI | ACTGG | 7 cut(s) | 1683, 2040, 2193, 2292, 2763, 3797, 4065 |
| BssAI | RCCGGY | 1 cut(s) | 3881 |
| BssECI | CCNNGG | 4 cut(s) | 237, 2256, 2317, 3130 |
| BssNI | GRCGYC | 2 cut(s) | 1198, 1790 |
| BssSI | CACGAG | 1 cut(s) | 1407 |
| BssT1I | CCWWGG | 2 cut(s) | 2256, 2317 |
| Bst2BI | CACGAG | 1 cut(s) | 1407 |
| Bst2UI | CCWGG | 4 cut(s) | 238, 923, 3132, 3390 |
| Bst6I | CTCTTC | 6 cut(s) | 308, 313, 1807, 2034, 2595, 3329 |
| BstACI | GRCGYC | 2 cut(s) | 1198, 1790 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1412 |
| BstAUI | TGTACA | 3 cut(s) | 92, 1695, 3429 |
| BstBI | TTCGAA | 1 cut(s) | 3075 |
| BstC8I | GCNNGC | 8 cut(s) | 684, 1849, 3681, 3717, 3883, 4105, 4160, 4261 |
| BstDSI | CCRYGG | 1 cut(s) | 2256 |
| BstEII | GGTNACC | 2 cut(s) | 2446, 3488 |
| BstFNI | CGCG | 2 cut(s) | 3560, 3654 |
| BstHHI | GCGC | 3 cut(s) | 984, 2887, 3738 |
| BstMAI | GTCTC | 9 cut(s) | 287, 1189, 1338, 1889, 2133, 2366, 2736, 2957, 4165 |
| BstMCI | CGRYCG | 2 cut(s) | 156, 367 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 821, 1083, 1206, 1244, 1412, 1421, 1523, 3221, 3735 |
| BstNI | CCWGG | 4 cut(s) | 238, 923, 3132, 3390 |
| BstNSI | RCATGY | 7 cut(s) | 20, 24, 1480, 1484, 1851, 3401, 3436 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 4231 |
| BstPI | GGTNACC | 2 cut(s) | 2446, 3488 |
| BstSCI | CCNGG | 5 cut(s) | 236, 539, 921, 3130, 3388 |
| BstSFI | CTRYAG | 3 cut(s) | 206, 1659, 3108 |
| BstSLI | GKGCMC | 2 cut(s) | 1610, 3003 |
| BstUI | CGCG | 2 cut(s) | 3560, 3654 |
| BstV1I | GCAGC | 3 cut(s) | 220, 927, 1501 |
| BstV2I | GAAGAC | 5 cut(s) | 380, 659, 1026, 3022, 3224 |
| BstX2I | RGATCY | 4 cut(s) | 520, 1972, 2366, 3828 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 664, 2200 |
| BstYI | RGATCY | 4 cut(s) | 520, 1972, 2366, 3828 |
| BstZI | CGGCCG | 1 cut(s) | 364 |
| Bsu15I | ATCGAT | 1 cut(s) | 2643 |
| BsuRI | GGCC | 8 cut(s) | 366, 1582, 1989, 2316, 3215, 3412, 3885, 4259 |
| BsuTUI | ATCGAT | 1 cut(s) | 2643 |
| BtgI | CCRYGG | 1 cut(s) | 2256 |
| BtrI | CACGTC | 2 cut(s) | 1543, 3347 |
| BtsIMutI | CAGTG | 5 cut(s) | 1471, 1773, 2709, 3151, 4218 |
| BtuMI | TCGCGA | 1 cut(s) | 3654 |
| BveI | ACCTGC | 1 cut(s) | 1666 |
| Cac8I | GCNNGC | 8 cut(s) | 684, 1849, 3681, 3717, 3883, 4105, 4160, 4261 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1678 |
| CciI | TCATGA | 1 cut(s) | 4120 |
| CfoI | GCGC | 3 cut(s) | 984, 2887, 3738 |
| Cfr10I | RCCGGY | 1 cut(s) | 3881 |
| Cfr13I | GGNCC | 5 cut(s) | 1914, 2314, 3584, 3884, 4294 |
| ClaI | ATCGAT | 1 cut(s) | 2643 |
| CseI | GACGC | 6 cut(s) | 1206, 1515, 2488, 2911, 3566, 3718 |
| Csp6I | GTAC | 9 cut(s) | 93, 139, 758, 1655, 1696, 3430, 3580, 3989, 4012 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 432, 467, 1093, 1128 |
| CviQI | GTAC | 9 cut(s) | 93, 139, 758, 1655, 1696, 3430, 3580, 3989, 4012 |
| DraI | TTTAAA | 3 cut(s) | 1600, 1623, 1842 |
| DraIII | CACNNNGTG | 1 cut(s) | 166 |
| EaeI | YGGCCR | 3 cut(s) | 364, 1987, 3410 |
| EagI | CGGCCG | 1 cut(s) | 364 |
| Eam1104I | CTCTTC | 6 cut(s) | 308, 313, 1807, 2034, 2595, 3329 |
| EarI | CTCTTC | 6 cut(s) | 308, 313, 1807, 2034, 2595, 3329 |
| EciI | GGCGGA | 1 cut(s) | 2166 |
| Ecl136II | GAGCTC | 1 cut(s) | 2293 |
| EclXI | CGGCCG | 1 cut(s) | 364 |
| Eco130I | CCWWGG | 2 cut(s) | 2256, 2317 |
| Eco24I | GRGCYC | 2 cut(s) | 2295, 3807 |
| Eco31I | GGTCTC | 1 cut(s) | 1889 |
| Eco32I | GATATC | 1 cut(s) | 2647 |
| Eco47I | GGWCC | 3 cut(s) | 1914, 3584, 4294 |
| Eco52I | CGGCCG | 1 cut(s) | 364 |
| Eco53kI | GAGCTC | 1 cut(s) | 2293 |
| Eco57I | CTGAAG | 4 cut(s) | 2427, 2585, 3683, 4308 |
| Eco91I | GGTNACC | 2 cut(s) | 2446, 3488 |
| EcoICRI | GAGCTC | 1 cut(s) | 2293 |
| EcoO109I | RGGNCCY | 1 cut(s) | 4294 |
| EcoO65I | GGTNACC | 2 cut(s) | 2446, 3488 |
| EcoRI | GAATTC | 1 cut(s) | 350 |
| EcoRII | CCWGG | 4 cut(s) | 236, 921, 3130, 3388 |
| EcoRV | GATATC | 1 cut(s) | 2647 |
| EcoT14I | CCWWGG | 2 cut(s) | 2256, 2317 |
| EcoT22I | ATGCAT | 5 cut(s) | 22, 1426, 1482, 1494, 3399 |
| EcoT38I | GRGCYC | 2 cut(s) | 2295, 3807 |
| ErhI | CCWWGG | 2 cut(s) | 2256, 2317 |
| Esp3I | CGTCTC | 1 cut(s) | 1189 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 660, 692 |
| FaqI | GGGAC | 2 cut(s) | 2827, 4147 |
| FauI | CCCGC | 1 cut(s) | 926 |
| FauNDI | CATATG | 2 cut(s) | 502, 3575 |
| FbaI | TGATCA | 4 cut(s) | 3, 1377, 2929, 4117 |
| FblI | GTMKAC | 1 cut(s) | 952 |
| Fnu4HI | GCNGC | 8 cut(s) | 234, 367, 941, 1075, 1515, 2417, 3465, 4156 |
| FriOI | GRGCYC | 2 cut(s) | 2295, 3807 |
| Fsp4HI | GCNGC | 8 cut(s) | 234, 367, 941, 1075, 1515, 2417, 3465, 4156 |
| FspBI | CTAG | 8 cut(s) | 176, 840, 1871, 2103, 2700, 3029, 3062, 3944 |
| FspI | TGCGCA | 1 cut(s) | 983 |
| GlaI | GCGC | 3 cut(s) | 983, 2886, 3737 |
| GluI | GCNGC | 8 cut(s) | 234, 367, 941, 1075, 1515, 2417, 3465, 4156 |
| GsaI | CCCAGC | 1 cut(s) | 3599 |
| GsuI | CTGGAG | 2 cut(s) | 2176, 2309 |
| HaeIII | GGCC | 8 cut(s) | 366, 1582, 1989, 2316, 3215, 3412, 3885, 4259 |
| HapII | CCGG | 4 cut(s) | 123, 540, 3212, 3882 |
| HgaI | GACGC | 6 cut(s) | 1206, 1515, 2488, 2911, 3566, 3718 |
| HhaI | GCGC | 3 cut(s) | 984, 2887, 3738 |
| Hin1I | GRCGYC | 2 cut(s) | 1198, 1790 |
| Hin6I | GCGC | 3 cut(s) | 982, 2885, 3736 |
| HinP1I | GCGC | 3 cut(s) | 982, 2885, 3736 |
| HincII | GTYRAC | 3 cut(s) | 953, 2046, 4053 |
| HindII | GTYRAC | 3 cut(s) | 953, 2046, 4053 |
| HindIII | AAGCTT | 3 cut(s) | 1436, 3713, 4198 |
| HpaII | CCGG | 4 cut(s) | 123, 540, 3212, 3882 |
| Hpy166II | GTNNAC | 8 cut(s) | 141, 953, 1115, 1608, 1917, 2046, 3296, 4053 |
| Hpy8I | GTNNAC | 8 cut(s) | 141, 953, 1115, 1608, 1917, 2046, 3296, 4053 |
| HpyAV | CCTTC | 6 cut(s) | 1199, 1222, 1737, 3973, 4124, 4283 |
| HpyCH4IV | ACGT | 7 cut(s) | 1542, 1790, 1832, 2058, 2330, 3346, 3629 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 821, 1083, 1206, 1244, 1412, 1421, 1523, 3221, 3735 |
| HpySE526I | ACGT | 7 cut(s) | 1542, 1790, 1832, 2058, 2330, 3346, 3629 |
| Hsp92I | GRCGYC | 2 cut(s) | 1198, 1790 |
| HspAI | GCGC | 3 cut(s) | 982, 2885, 3736 |
| KroI | GCCGGC | 1 cut(s) | 3881 |
| KroNI | GCCGGC | 1 cut(s) | 3883 |
| Ksp22I | TGATCA | 4 cut(s) | 3, 1377, 2929, 4117 |
| LmnI | GCTCC | 6 cut(s) | 420, 1562, 2290, 2560, 3852, 4180 |
| Lsp1109I | GCAGC | 3 cut(s) | 220, 927, 1501 |
| LweI | GCATC | 8 cut(s) | 316, 1402, 1411, 1721, 2152, 2578, 2774, 2830 |
| MaeI | CTAG | 8 cut(s) | 176, 840, 1871, 2103, 2700, 3029, 3062, 3944 |
| MaeII | ACGT | 7 cut(s) | 1542, 1790, 1832, 2058, 2330, 3346, 3629 |
| MaeIII | GTNAC | 8 cut(s) | 1135, 1259, 1791, 1864, 2446, 2975, 3414, 3488 |
| MfeI | CAATTG | 3 cut(s) | 1092, 1268, 2068 |
| MflI | RGATCY | 4 cut(s) | 520, 1972, 2366, 3828 |
| MhlI | GDGCHC | 6 cut(s) | 417, 826, 1610, 2295, 3003, 3807 |
| MlyI | GAGTC | 6 cut(s) | 948, 2365, 2930, 2959, 3956, 4221 |
| MmeI | TCCRAC | 6 cut(s) | 516, 1398, 1836, 1855, 2007, 3061 |
| Mph1103I | ATGCAT | 5 cut(s) | 22, 1426, 1482, 1494, 3399 |
| MroNI | GCCGGC | 1 cut(s) | 3881 |
| MroXI | GAANNNNTTC | 2 cut(s) | 621, 672 |
| MslI | CAYNNNNRTG | 3 cut(s) | 72, 662, 1613 |
| MspA1I | CMGCKG | 1 cut(s) | 3780 |
| MspI | CCGG | 4 cut(s) | 123, 540, 3212, 3882 |
| MspR9I | CCNGG | 5 cut(s) | 238, 541, 923, 3132, 3390 |
| MunI | CAATTG | 3 cut(s) | 1092, 1268, 2068 |
| Mva1269I | GAATGC | 3 cut(s) | 1494, 3028, 3399 |
| MvaI | CCWGG | 4 cut(s) | 238, 923, 3132, 3390 |
| MvnI | CGCG | 2 cut(s) | 3560, 3654 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 821, 1083, 1206, 1244, 1412, 1421, 1523, 3221, 3735 |
| NaeI | GCCGGC | 1 cut(s) | 3883 |
| NciI | CCSGG | 1 cut(s) | 541 |
| NcoI | CCATGG | 1 cut(s) | 2256 |
| NdeI | CATATG | 2 cut(s) | 502, 3575 |
| NgoMIV | GCCGGC | 1 cut(s) | 3881 |
| NlaIV | GGNNCC | 3 cut(s) | 194, 746, 4295 |
| NmeAIII | GCCGAG | 1 cut(s) | 160 |
| NmuCI | GTSAC | 6 cut(s) | 1135, 1791, 2446, 2975, 3414, 3488 |
| NruI | TCGCGA | 1 cut(s) | 3654 |
| NsbI | TGCGCA | 1 cut(s) | 983 |
| NsiI | ATGCAT | 5 cut(s) | 22, 1426, 1482, 1494, 3399 |
| NspI | RCATGY | 7 cut(s) | 20, 24, 1480, 1484, 1851, 3401, 3436 |
| NspV | TTCGAA | 1 cut(s) | 3075 |
| OliI | CACNNNNGTG | 1 cut(s) | 662 |
| PaeI | GCATGC | 1 cut(s) | 1851 |
| PagI | TCATGA | 1 cut(s) | 4120 |
| PciI | ACATGT | 1 cut(s) | 3432 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2580 |
| PctI | GAATGC | 3 cut(s) | 1494, 3028, 3399 |
| PdiI | GCCGGC | 1 cut(s) | 3883 |
| PdmI | GAANNNNTTC | 2 cut(s) | 621, 672 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 3164 |
| PfoI | TCCNGGA | 1 cut(s) | 3388 |
| PkrI | GCNGC | 8 cut(s) | 235, 368, 942, 1076, 1516, 2418, 3466, 4157 |
| Ple19I | CGATCG | 1 cut(s) | 156 |
| PleI | GAGTC | 6 cut(s) | 948, 2364, 2930, 2959, 3955, 4221 |
| PpsI | GAGTC | 6 cut(s) | 948, 2364, 2930, 2959, 3955, 4221 |
| PpuMI | RGGWCCY | 1 cut(s) | 4294 |
| PscI | ACATGT | 1 cut(s) | 3432 |
| PshAI | GACNNNNGTC | 1 cut(s) | 4231 |
| PshBI | ATTAAT | 1 cut(s) | 795 |
| Psp124BI | GAGCTC | 1 cut(s) | 2295 |
| Psp1406I | AACGTT | 2 cut(s) | 1832, 2330 |
| Psp5II | RGGWCCY | 1 cut(s) | 4294 |
| Psp6I | CCWGG | 4 cut(s) | 236, 921, 3130, 3388 |
| PspEI | GGTNACC | 2 cut(s) | 2446, 3488 |
| PspFI | CCCAGC | 1 cut(s) | 3595 |
| PspGI | CCWGG | 4 cut(s) | 236, 921, 3130, 3388 |
| PspN4I | GGNNCC | 3 cut(s) | 194, 746, 4295 |
| PspPI | GGNCC | 5 cut(s) | 1914, 2314, 3584, 3884, 4294 |
| PspPPI | RGGWCCY | 1 cut(s) | 4294 |
| PstI | CTGCAG | 3 cut(s) | 210, 1663, 3112 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1678 |
| PsuI | RGATCY | 4 cut(s) | 520, 1972, 2366, 3828 |
| PvuI | CGATCG | 1 cut(s) | 156 |
| RruI | TCGCGA | 1 cut(s) | 3654 |
| RsaI | GTAC | 9 cut(s) | 94, 140, 759, 1656, 1697, 3431, 3581, 3990, 4013 |
| RsaNI | GTAC | 9 cut(s) | 93, 139, 758, 1655, 1696, 3430, 3580, 3989, 4012 |
| RseI | CAYNNNNRTG | 3 cut(s) | 72, 662, 1613 |
| SacI | GAGCTC | 1 cut(s) | 2295 |
| SalI | GTCGAC | 1 cut(s) | 951 |
| SatI | GCNGC | 8 cut(s) | 234, 367, 941, 1075, 1515, 2417, 3465, 4156 |
| Sau96I | GGNCC | 5 cut(s) | 1914, 2314, 3584, 3884, 4294 |
| ScaI | AGTACT | 1 cut(s) | 4013 |
| SchI | GAGTC | 6 cut(s) | 948, 2365, 2930, 2959, 3956, 4221 |
| ScrFI | CCNGG | 5 cut(s) | 238, 541, 923, 3132, 3390 |
| SduI | GDGCHC | 6 cut(s) | 417, 826, 1610, 2295, 3003, 3807 |
| SfaNI | GCATC | 8 cut(s) | 316, 1402, 1411, 1721, 2152, 2578, 2774, 2830 |
| SfcI | CTRYAG | 3 cut(s) | 206, 1659, 3108 |
| SfuI | TTCGAA | 1 cut(s) | 3075 |
| SinI | GGWCC | 3 cut(s) | 1914, 3584, 4294 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 72, 662, 1613 |
| SmlI | CTYRAG | 5 cut(s) | 1192, 1286, 1650, 2020, 2494 |
| SmoI | CTYRAG | 5 cut(s) | 1192, 1286, 1650, 2020, 2494 |
| SphI | GCATGC | 1 cut(s) | 1851 |
| SspI | AATATT | 4 cut(s) | 968, 1636, 2098, 2170 |
| SspMI | CTAG | 8 cut(s) | 176, 840, 1871, 2103, 2700, 3029, 3062, 3944 |
| SstI | GAGCTC | 1 cut(s) | 2295 |
| StyD4I | CCNGG | 5 cut(s) | 236, 539, 921, 3130, 3388 |
| StyI | CCWWGG | 2 cut(s) | 2256, 2317 |
| TaiI | ACGT | 7 cut(s) | 1545, 1793, 1835, 2061, 2333, 3349, 3632 |
| TaqII | GACCGA | 1 cut(s) | 768 |
| TatI | WGTACW | 7 cut(s) | 92, 138, 757, 1695, 3429, 3988, 4011 |
| TauI | GCSGC | 5 cut(s) | 369, 1077, 2419, 3467, 4158 |
| TscAI | CASTG | 5 cut(s) | 1471, 1780, 2716, 3158, 4225 |
| TseFI | GTSAC | 6 cut(s) | 1135, 1791, 2446, 2975, 3414, 3488 |
| TseI | GCWGC | 3 cut(s) | 233, 940, 1514 |
| Tsp45I | GTSAC | 6 cut(s) | 1135, 1791, 2446, 2975, 3414, 3488 |
| TspGWI | ACGGA | 7 cut(s) | 407, 704, 2381, 2423, 3055, 3764, 4018 |
| TspRI | CASTG | 5 cut(s) | 1471, 1780, 2716, 3158, 4225 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 3164 |
| VneI | GTGCAC | 1 cut(s) | 1606 |
| VpaK11BI | GGWCC | 3 cut(s) | 1914, 3584, 4294 |
| VspI | ATTAAT | 1 cut(s) | 795 |
| XapI | RAATTY | 4 cut(s) | 350, 2744, 2852, 3478 |
| XbaI | TCTAGA | 1 cut(s) | 3028 |
| XceI | RCATGY | 7 cut(s) | 20, 24, 1480, 1484, 1851, 3401, 3436 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 2219, 2308 |
| XmiI | GTMKAC | 1 cut(s) | 952 |
| XmnI | GAANNNNTTC | 2 cut(s) | 621, 672 |
| XspI | CTAG | 8 cut(s) | 176, 840, 1871, 2103, 2700, 3029, 3062, 3944 |
| ZraI | GACGTC | 1 cut(s) | 1791 |
| ZrmI | AGTACT | 1 cut(s) | 4013 |
| Zsp2I | ATGCAT | 5 cut(s) | 22, 1426, 1482, 1494, 3399 |