RLG00000009402

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Forward (+)
52398579 .. 52403301
4723 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000009402

Sequence Viewer

Length: 2004 bp
ATGGAGTGTCTCATTGCAATTGGTACCGGAATTATTGGAAAAATTGCTAAGTTTACAGTTGCACCAGTTGGACGCCAGGTGGGTTATGTATTCCACTACAACAAGAACCTTAGTAAACTAAAGAACCAAGTTGCCGACTTAGAAGCTGCAAGAGAAAGTTTGGAGCACAAGATTGTTGAAGAAGAAAGAGCAGGAAGAATAGTACTGGAAACTTTTGTAACCAATTGGTTGACAGATGTGAATAAGATCATTAAAGTGGCTAAAGATTTCTTAAAAGATGAACATCAAGCAAAGATCAAGTGTATGCATAGATTTTGTCCTAACCTAATGGCTCGTCATCATCTAAGCAGGAAATCAACAAAATTGGTTCAAGATGTTTCTTATCTCTATGGGAAAAAGGACTTTTCCAATATTGCATACGATGTTACACCGGAAGATGTATGTGTATTTTCTACCAAAGATTATCAAGCCTTTGATTCAAGGACTTCAGTTGCTAAGCAGATCATGGATGAGCTAAGAAGTTCTGCTACGGCTATGATTGGGGTGTATGGTATTGGGGGTGTGGGGAAGACGACACTAGTCAAAGAAGTTTACAGGCAAGCCACAAATGATAAAACATTATTTGATGATGTGGTTATGGTATTGGATGTAAAGCATAATCCAAGCATCGAAAGAATTCAAAGTGAAATTGCTGAGAAGTTAGGTCTCAAATTTCATGAAATTGGAACTCCAGCTGGAAGAGCGCGTCATCTATGTAATCGAATAAAAGACAAGAAAACTCTTGTCATTTTAGATGACGTTTGGGAAAACATTGATTTGGAGACTGTGGGTCTTCCTCACCTGGCAACTCTTAGGATACTCTTAACATCTAGATTTAAAATAGTATTATCTTCTGACATGGCACCACAAGTAGCTGAGAAATGTGGAGGTTTGCCACTTTTAATTGTCACTGTTGCAAGAGCTCTGAAAGATAGTCCATTGTATGCGTGGAAAGATACTTTGAGACGCTTAGAAAGGTTGGATGGACAACGATTGACAAATAAAACATACTCTGCTATTCAGTGGAGTTACGATAAATTGGATAATGACGAGCTTAAGTTGGTATTCTTGCTCTGTGCAGCTGTAGTTGGGAGTAGTAACACTGTTGATTTCCTTGATTTGTTGAAATATAGTATGGGCATGGGTTACATTAAAAACGTGGATGCAATGGATGAAGCACGAGATGCATTGCGTTCATTGCTTGGAAAACTCAAAGATTTTTGTCTATTGCTTGACTATGGTCATAGTCAACATGTCAGTATGCATGATCTTGTAAAAGATGTTGCTAAACGAATTGGTGCTGGCAGAGATCAACACATGTTTTCAGTATCTCATGGAAGCTTAATGGCCAGAAGTCTTCAACAGTTGAGGAGCCTAAGAGTGCAAAATTGTGGGGTTGAGGAAATCGTGTCGAAAGAAGACGGTGTACAAACAACACCTATGTTTGTTTTTTCAAAATTAACACAAGTGAGATTTCAAAATTTGCCCCAACTTAGGAATTTCTATCCCGGATTGCATTCTTCGAAGTGGCCGGCACTCGTGGCTTTGGAGGTGTATGATTGTATTAAGGTGCAGATATTTGCGGAGGGCAGGCGTGAGTTGAACAATCTGTGCACTCTAAATAAACAATCTTTGTTTTTACTTGAGAAGGATTCGTTCCCCAATTTGGAAATGTTAGGCATGGCCGTAATGGAGAATTGCGATAGTCCGCCACTCCACTTGTTTAGGAAGCTCGAATTTCTTTGTATTTCTGCATGCACCGACTCATCGTTGAATTCCCTTGAGAAATTACTTGGTCTTGGAAAAGTCAATGGAGAAATACATGCAGTTGGGGATGGGACCCTCCCACATTTAAGGGTGTTGCACCTTCACGGGATGCGGAAGCTGATGAATCTTGGGGAGGATAGCTTCGGACCAGCATGCCCATATTTTCCAAATCTGGAAATTCTGGAGCTAGAGGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

668

Amino Acids

75.1

Weight (kDa)

8.05

Isoelectric Point (pI)

39.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 165 - 301 2.1e-23 NB-ARC domain
AAA_22 PF13401 178 - 289 6.9e-06 AAA domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 23
AccB1I GGYRCC 2 cut(s) 23, 901
AccII CGCG 1 cut(s) 745
AciI CCGC 3 cut(s) 1622, 1748, 1918
AcoI YGGCCR 3 cut(s) 1386, 1568, 1722
AcsI RAATTY 7 cut(s) 675, 710, 1519, 1537, 1775, 1813, 1983
AcuI CTGAAG 1 cut(s) 471
AcyI GRCGYC 1 cut(s) 73
AfaI GTAC 3 cut(s) 25, 204, 1467
AfiI CCNNNNNNNGG 2 cut(s) 1533, 1705
AflII CTTAAG 1 cut(s) 1094
AflIII ACRYGT 2 cut(s) 1291, 1356
AhdI GACNNNNNGTC 1 cut(s) 828
AhlI ACTAGT 1 cut(s) 577
AjnI CCWGG 2 cut(s) 75, 840
Alw21I GWGCWC 3 cut(s) 168, 964, 1655
Alw26I GTCTC 4 cut(s) 14, 710, 815, 997
Alw44I GTGCAC 1 cut(s) 1651
AoxI GGCC 3 cut(s) 1386, 1568, 1722
ApaLI GTGCAC 1 cut(s) 1651
ApeKI GCWGC 2 cut(s) 146, 1118
ApoI RAATTY 7 cut(s) 675, 710, 1519, 1537, 1775, 1813, 1983
Asp700I GAANNNNTTC 1 cut(s) 675
Asp718I GGTACC 1 cut(s) 23
AspLEI GCGC 1 cut(s) 745
AspS9I GGNCC 2 cut(s) 1878, 1952
AsuC2I CCSGG 1 cut(s) 1548
AsuHPI GGTGA 1 cut(s) 830
AsuII TTCGAA 1 cut(s) 1562
AvaII GGWCC 2 cut(s) 1878, 1952
BaeGI GKGCMC 1 cut(s) 1655
BalI TGGCCA 1 cut(s) 1388
BanI GGYRCC 2 cut(s) 23, 901
BanII GRGCYC 1 cut(s) 964
BarI GAAGNNNNNNTAC 4 cut(s) 511, 543, 1449, 1481
BauI CACGAG 2 cut(s) 1218, 1577
BbsI GAAGAC 4 cut(s) 575, 824, 1388, 1464
Bbv12I GWGCWC 3 cut(s) 168, 964, 1655
BbvI GCAGC 2 cut(s) 133, 1130
BccI CCATC 2 cut(s) 1016, 1868
BceAI ACGGC 2 cut(s) 546, 1709
BciT130I CCWGG 2 cut(s) 77, 842
BciVI GTATCC 1 cut(s) 849
BcnI CCSGG 1 cut(s) 1548
BcoDI GTCTC 4 cut(s) 14, 710, 815, 997
BcuI ACTAGT 1 cut(s) 577
BfaI CTAG 3 cut(s) 578, 870, 1994
BfmI CTRYAG 1 cut(s) 1122
BfrI CTTAAG 1 cut(s) 1094
BfuI GTATCC 1 cut(s) 849
BisI GCNGC 2 cut(s) 147, 1119
BlpI GCTNAGC 1 cut(s) 495
BlsI GCNGC 2 cut(s) 148, 1120
BmcAI AGTACT 1 cut(s) 204
Bme1390I CCNGG 3 cut(s) 77, 842, 1548
Bme18I GGWCC 2 cut(s) 1878, 1952
BmeRI GACNNNNNGTC 1 cut(s) 828
BmgT120I GGNCC 2 cut(s) 1878, 1952
BmiI GGNNCC 5 cut(s) 25, 903, 1412, 1879, 1880
BmrFI CCNGG 3 cut(s) 77, 842, 1548
BmsI GCATC 4 cut(s) 675, 1192, 1213, 1905
BoxI GACNNNNGTC 2 cut(s) 578, 1278
BpiI GAAGAC 4 cut(s) 575, 824, 1388, 1464
BpmI CTGGAG 1 cut(s) 714
Bpu1102I GCTNAGC 1 cut(s) 495
Bpu14I TTCGAA 1 cut(s) 1562
BpuEI CTTGAG 2 cut(s) 1703, 1841
BpuMI CCSGG 1 cut(s) 1548
BsaBI GATNNNNATC 1 cut(s) 282
BsaHI GRCGYC 1 cut(s) 73
BsaI GGTCTC 1 cut(s) 710
BsaWI WCCGGW 2 cut(s) 26, 430
Bsc4I CCNNNNNNNGG 2 cut(s) 1533, 1705
Bse118I RCCGGY 1 cut(s) 1570
Bse1I ACTGG 2 cut(s) 65, 210
Bse3DI GCAATG 4 cut(s) 12, 1212, 1226, 1235
Bse8I GATNNNNATC 1 cut(s) 282
BseBI CCWGG 2 cut(s) 77, 842
BseGI GGATG 7 cut(s) 514, 652, 1027, 1207, 1216, 1879, 1920
BseJI GATNNNNATC 1 cut(s) 282
BseLI CCNNNNNNNGG 2 cut(s) 1533, 1705
BseMI GCAATG 4 cut(s) 12, 1212, 1226, 1235
BseMII CTCAG 2 cut(s) 684, 906
BseNI ACTGG 2 cut(s) 65, 210
BseRI GAGGAG 1 cut(s) 1423
BseSI GKGCMC 1 cut(s) 1655
BseXI GCAGC 2 cut(s) 133, 1130
BsgI GTGCAG 2 cut(s) 1137, 1631
Bsh1236I CGCG 1 cut(s) 745
BshFI GGCC 3 cut(s) 1388, 1570, 1724
BshNI GGYRCC 2 cut(s) 23, 901
BsiHKAI GWGCWC 3 cut(s) 168, 964, 1655
BsiSI CCGG 4 cut(s) 27, 431, 1548, 1571
BslFI GGGAC 1 cut(s) 1891
BslI CCNNNNNNNGG 2 cut(s) 1533, 1705
BsmAI GTCTC 4 cut(s) 14, 710, 815, 997
BsmBI CGTCTC 1 cut(s) 997
BsmFI GGGAC 1 cut(s) 1891
BsmI GAATGC 1 cut(s) 1555
BsnI GGCC 3 cut(s) 1388, 1570, 1724
Bso31I GGTCTC 1 cut(s) 710
Bsp119I TTCGAA 1 cut(s) 1562
Bsp1286I GDGCHC 3 cut(s) 168, 964, 1655
Bsp1407I TGTACA 1 cut(s) 1465
Bsp143I GATC 5 cut(s) 246, 294, 501, 1306, 1348
Bsp1720I GCTNAGC 1 cut(s) 495
BspACI CCGC 3 cut(s) 1622, 1748, 1918
BspANI GGCC 3 cut(s) 1388, 1570, 1724
BspCNI CTCAG 2 cut(s) 685, 907
BspFNI CGCG 1 cut(s) 745
BspHI TCATGA 1 cut(s) 715
BspLI GGNNCC 5 cut(s) 25, 903, 1412, 1879, 1880
BspQI GCTCTTC 1 cut(s) 733
BspT104I TTCGAA 1 cut(s) 1562
BspT107I GGYRCC 2 cut(s) 23, 901
BspTI CTTAAG 1 cut(s) 1094
BspTNI GGTCTC 1 cut(s) 710
BsrDI GCAATG 4 cut(s) 12, 1212, 1226, 1235
BsrFI RCCGGY 1 cut(s) 1570
BsrGI TGTACA 1 cut(s) 1465
BsrI ACTGG 2 cut(s) 65, 210
BssAI RCCGGY 1 cut(s) 1570
BssMI GATC 5 cut(s) 246, 294, 501, 1306, 1348
BssNI GRCGYC 1 cut(s) 73
BssSI CACGAG 2 cut(s) 1218, 1577
Bst2BI CACGAG 2 cut(s) 1218, 1577
Bst2UI CCWGG 2 cut(s) 77, 842
Bst4CI ACNGT 6 cut(s) 58, 826, 952, 1144, 1404, 1463
Bst6I CTCTTC 1 cut(s) 733
BstACI GRCGYC 1 cut(s) 73
BstAFI CTTAAG 1 cut(s) 1094
BstAPI GCANNNNNTGC 1 cut(s) 1223
BstAUI TGTACA 1 cut(s) 1465
BstBI TTCGAA 1 cut(s) 1562
BstC8I GCNNGC 6 cut(s) 600, 1342, 1572, 1631, 1795, 1960
BstF5I GGATG 7 cut(s) 514, 652, 1027, 1207, 1216, 1879, 1920
BstFNI CGCG 1 cut(s) 745
BstHHI GCGC 1 cut(s) 745
BstKTI GATC 5 cut(s) 249, 297, 504, 1309, 1351
BstMAI GTCTC 4 cut(s) 14, 710, 815, 997
BstMBI GATC 5 cut(s) 246, 294, 501, 1306, 1348
BstMWI GCNNNNNNNGC 4 cut(s) 740, 1223, 1237, 1580
BstNI CCWGG 2 cut(s) 77, 842
BstNSI RCATGY 5 cut(s) 1295, 1360, 1797, 1865, 1962
BstPAI GACNNNNGTC 2 cut(s) 578, 1278
BstSCI CCNGG 3 cut(s) 75, 840, 1546
BstSFI CTRYAG 1 cut(s) 1122
BstSLI GKGCMC 1 cut(s) 1655
BstUI CGCG 1 cut(s) 745
BstV1I GCAGC 2 cut(s) 133, 1130
BstV2I GAAGAC 4 cut(s) 575, 824, 1388, 1464
BsuI GTATCC 1 cut(s) 849
BsuRI GGCC 3 cut(s) 1388, 1570, 1724
BtsCI GGATG 7 cut(s) 514, 652, 1027, 1207, 1216, 1879, 1920
BtsIMutI CAGTG 3 cut(s) 948, 1067, 1140
Cac8I GCNNGC 6 cut(s) 600, 1342, 1572, 1631, 1795, 1960
CciI TCATGA 1 cut(s) 715
CfoI GCGC 1 cut(s) 745
Cfr10I RCCGGY 1 cut(s) 1570
Cfr13I GGNCC 2 cut(s) 1878, 1952
CseI GACGC 3 cut(s) 81, 734, 1014
Csp6I GTAC 3 cut(s) 24, 203, 1466
CspCI CAANNNNNGTGG 2 cut(s) 1740, 1775
CviQI GTAC 3 cut(s) 24, 203, 1466
DpnI GATC 5 cut(s) 248, 296, 503, 1308, 1350
DpnII GATC 5 cut(s) 246, 294, 501, 1306, 1348
DraI TTTAAA 1 cut(s) 877
DriI GACNNNNNGTC 1 cut(s) 828
EaeI YGGCCR 3 cut(s) 1386, 1568, 1722
Eam1104I CTCTTC 1 cut(s) 733
Eam1105I GACNNNNNGTC 1 cut(s) 828
EarI CTCTTC 1 cut(s) 733
EciI GGCGGA 1 cut(s) 1737
Ecl136II GAGCTC 1 cut(s) 962
Eco24I GRGCYC 1 cut(s) 964
Eco31I GGTCTC 1 cut(s) 710
Eco47I GGWCC 2 cut(s) 1878, 1952
Eco53kI GAGCTC 1 cut(s) 962
Eco57I CTGAAG 1 cut(s) 471
EcoICRI GAGCTC 1 cut(s) 962
EcoO109I RGGNCCY 1 cut(s) 1878
EcoRI GAATTC 2 cut(s) 675, 1813
EcoRII CCWGG 2 cut(s) 75, 840
EcoT22I ATGCAT 3 cut(s) 309, 1228, 1305
EcoT38I GRGCYC 1 cut(s) 964
Esp3I CGTCTC 1 cut(s) 997
FaqI GGGAC 1 cut(s) 1891
Fnu4HI GCNGC 2 cut(s) 147, 1119
FokI GGATG 7 cut(s) 521, 659, 1034, 1214, 1223, 1886, 1927
FriOI GRGCYC 1 cut(s) 964
Fsp4HI GCNGC 2 cut(s) 147, 1119
FspBI CTAG 3 cut(s) 578, 870, 1994
GlaI GCGC 1 cut(s) 744
GluI GCNGC 2 cut(s) 147, 1119
GsuI CTGGAG 1 cut(s) 714
HaeIII GGCC 3 cut(s) 1388, 1570, 1724
HapII CCGG 4 cut(s) 27, 431, 1548, 1571
HgaI GACGC 3 cut(s) 81, 734, 1014
HhaI GCGC 1 cut(s) 745
Hin1I GRCGYC 1 cut(s) 73
Hin6I GCGC 1 cut(s) 743
HinP1I GCGC 1 cut(s) 743
HincII GTYRAC 2 cut(s) 231, 1289
HindII GTYRAC 2 cut(s) 231, 1289
HindIII AAGCTT 1 cut(s) 1378
HinfI GANTC 4 cut(s) 476, 1691, 1802, 1930
HpaII CCGG 4 cut(s) 27, 431, 1548, 1571
HphI GGTGA 1 cut(s) 830
Hpy166II GTNNAC 7 cut(s) 54, 116, 231, 592, 1289, 1466, 1653
Hpy188I TCNGA 3 cut(s) 895, 966, 1952
Hpy188III TCNNGA 5 cut(s) 371, 716, 870, 1979, 1988
Hpy8I GTNNAC 7 cut(s) 54, 116, 231, 592, 1289, 1466, 1653
HpyAV CCTTC 2 cut(s) 1681, 1916
HpyCH4III ACNGT 6 cut(s) 58, 826, 952, 1144, 1404, 1463
HpyCH4IV ACGT 2 cut(s) 798, 1197
HpyF10VI GCNNNNNNNGC 4 cut(s) 740, 1223, 1237, 1580
HpySE526I ACGT 2 cut(s) 798, 1197
Hsp92I GRCGYC 1 cut(s) 73
HspAI GCGC 1 cut(s) 743
KflI GGGWCCC 1 cut(s) 1878
KpnI GGTACC 1 cut(s) 27
KroI GCCGGC 1 cut(s) 1570
KroNI GCCGGC 1 cut(s) 1572
Kzo9I GATC 5 cut(s) 246, 294, 501, 1306, 1348
LguI GCTCTTC 1 cut(s) 733
LmnI GCTCC 3 cut(s) 163, 1410, 1990
Lsp1109I GCAGC 2 cut(s) 133, 1130
LweI GCATC 4 cut(s) 675, 1192, 1213, 1905
MaeI CTAG 3 cut(s) 578, 870, 1994
MaeII ACGT 2 cut(s) 798, 1197
MaeIII GTNAC 6 cut(s) 217, 424, 946, 1067, 1136, 1184
MalI GATC 5 cut(s) 248, 296, 503, 1308, 1350
MboI GATC 5 cut(s) 246, 294, 501, 1306, 1348
MfeI CAATTG 2 cut(s) 18, 223
MhlI GDGCHC 3 cut(s) 168, 964, 1655
MlsI TGGCCA 1 cut(s) 1388
MluNI TGGCCA 1 cut(s) 1388
MlyI GAGTC 1 cut(s) 1796
MmeI TCCRAC 2 cut(s) 49, 999
MnlI CCTC 9 cut(s) 846, 920, 1401, 1432, 1582, 1618, 1892, 1933, 1990
Mox20I TGGCCA 1 cut(s) 1388
Mph1103I ATGCAT 3 cut(s) 309, 1228, 1305
MroNI GCCGGC 1 cut(s) 1570
MroXI GAANNNNTTC 1 cut(s) 675
MscI TGGCCA 1 cut(s) 1388
MslI CAYNNNNRTG 1 cut(s) 254
Msp20I TGGCCA 1 cut(s) 1388
MspA1I CMGCKG 2 cut(s) 734, 1121
MspCI CTTAAG 1 cut(s) 1094
MspI CCGG 4 cut(s) 27, 431, 1548, 1571
MspR9I CCNGG 3 cut(s) 77, 842, 1548
MunI CAATTG 2 cut(s) 18, 223
Mva1269I GAATGC 1 cut(s) 1555
MvaI CCWGG 2 cut(s) 77, 842
MvnI CGCG 1 cut(s) 745
MwoI GCNNNNNNNGC 4 cut(s) 740, 1223, 1237, 1580
NaeI GCCGGC 1 cut(s) 1572
NciI CCSGG 1 cut(s) 1548
NdeII GATC 5 cut(s) 246, 294, 501, 1306, 1348
NgoMIV GCCGGC 1 cut(s) 1570
NlaIV GGNNCC 5 cut(s) 25, 903, 1412, 1879, 1880
NmuCI GTSAC 1 cut(s) 946
NsiI ATGCAT 3 cut(s) 309, 1228, 1305
NspI RCATGY 5 cut(s) 1295, 1360, 1797, 1865, 1962
NspV TTCGAA 1 cut(s) 1562
PaeI GCATGC 2 cut(s) 1797, 1962
PagI TCATGA 1 cut(s) 715
PciI ACATGT 2 cut(s) 1291, 1356
PciSI GCTCTTC 1 cut(s) 733
PctI GAATGC 1 cut(s) 1555
PdiI GCCGGC 1 cut(s) 1572
PdmI GAANNNNTTC 1 cut(s) 675
PfeI GAWTC 3 cut(s) 476, 1691, 1930
PfoI TCCNGGA 1 cut(s) 1546
PkrI GCNGC 2 cut(s) 148, 1120
PleI GAGTC 1 cut(s) 1796
PpsI GAGTC 1 cut(s) 1796
PpuMI RGGWCCY 1 cut(s) 1878
PscI ACATGT 2 cut(s) 1291, 1356
PshAI GACNNNNGTC 2 cut(s) 578, 1278
Psp124BI GAGCTC 1 cut(s) 964
Psp5II RGGWCCY 1 cut(s) 1878
Psp6I CCWGG 2 cut(s) 75, 840
PspGI CCWGG 2 cut(s) 75, 840
PspN4I GGNNCC 5 cut(s) 25, 903, 1412, 1879, 1880
PspPI GGNCC 2 cut(s) 1878, 1952
PspPPI RGGWCCY 1 cut(s) 1878
PvuII CAGCTG 2 cut(s) 734, 1121
RsaI GTAC 3 cut(s) 25, 204, 1467
RsaNI GTAC 3 cut(s) 24, 203, 1466
RseI CAYNNNNRTG 1 cut(s) 254
SacI GAGCTC 1 cut(s) 964
SapI GCTCTTC 1 cut(s) 733
SatI GCNGC 2 cut(s) 147, 1119
Sau3AI GATC 5 cut(s) 246, 294, 501, 1306, 1348
Sau96I GGNCC 2 cut(s) 1878, 1952
ScaI AGTACT 1 cut(s) 204
SchI GAGTC 1 cut(s) 1796
ScrFI CCNGG 3 cut(s) 77, 842, 1548
SduI GDGCHC 3 cut(s) 168, 964, 1655
SfaNI GCATC 4 cut(s) 675, 1192, 1213, 1905
SfcI CTRYAG 1 cut(s) 1122
SfuI TTCGAA 1 cut(s) 1562
SinI GGWCC 2 cut(s) 1878, 1952
SmiMI CAYNNNNRTG 1 cut(s) 254
SmlI CTYRAG 3 cut(s) 1094, 1682, 1820
SmoI CTYRAG 3 cut(s) 1094, 1682, 1820
SpeI ACTAGT 1 cut(s) 577
SphI GCATGC 2 cut(s) 1797, 1962
SsiI CCGC 3 cut(s) 1622, 1748, 1918
SspI AATATT 1 cut(s) 412
SspMI CTAG 3 cut(s) 578, 870, 1994
SstI GAGCTC 1 cut(s) 964
StyD4I CCNGG 3 cut(s) 75, 840, 1546
TaaI ACNGT 6 cut(s) 58, 826, 952, 1144, 1404, 1463
TaiI ACGT 2 cut(s) 801, 1200
TaqI TCGA 5 cut(s) 669, 760, 1451, 1562, 1773
TatI WGTACW 2 cut(s) 202, 1465
TfiI GAWTC 3 cut(s) 476, 1691, 1930
TscAI CASTG 3 cut(s) 955, 1067, 1147
TseFI GTSAC 1 cut(s) 946
TseI GCWGC 2 cut(s) 146, 1118
Tsp45I GTSAC 1 cut(s) 946
TspDTI ATGAA 6 cut(s) 294, 704, 732, 1224, 1227, 1943
TspRI CASTG 3 cut(s) 955, 1067, 1147
Vha464I CTTAAG 1 cut(s) 1094
VneI GTGCAC 1 cut(s) 1651
VpaK11BI GGWCC 2 cut(s) 1878, 1952
XapI RAATTY 7 cut(s) 675, 710, 1519, 1537, 1775, 1813, 1983
XbaI TCTAGA 1 cut(s) 869
XceI RCATGY 5 cut(s) 1295, 1360, 1797, 1865, 1962
XcmI CCANNNNNNNNNTGG 1 cut(s) 984
XmnI GAANNNNTTC 1 cut(s) 675
XspI CTAG 3 cut(s) 578, 870, 1994
ZrmI AGTACT 1 cut(s) 204
Zsp2I ATGCAT 3 cut(s) 309, 1228, 1305
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.