Rmu_sc0000166.1_g000032

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000166.1
OG0000042
Physical Location & Seq
Forward (+)
159705 .. 166723
7019 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000166.1_g000032.1.cds

Sequence Viewer

Length: 4509 bp
atgcttaacttctcatccgtgggtctccgatacacaggaatggattgtctttgtgcaattggtaacggcgttgtcggaaaaatagccgagtatacggttgaaccatttggacggctagtgggacgccaagtgggttatctaatccactacaacaagaatcttcaaactctaatgactcaagtgaagaatttgagcgtcgccagagatagagtaaagcaacaggttgatgaagctgatagaagaggtgagaaaatccataatgatgtccaaaaatggctcgatgaagtggctcagatcatgaaagacacggaagaattcttgaagggaaaatgccaagcaactggagagccaaacgaagtcttgaagaatgaaggccaagcaaatgaagagccaaacgaagtcttgaaagatgaacgtcaaggaaagctgaagcgtctccatcaattttgtcctaatccgagacttcgttatcaactaagcagaaagtcaacaaagttggtggaggctgtggatgaactctacaaaagaaaagacttctctagtgtttcatacagtgttcgcccacaagaggtatgtgtcatatctactgaagattatgaggcatttgattcaaggatctcaaccttgaataaaatcatggatgaattgagaagtcccggtgccgacatcattctagtgtatggtattgggggtgtgggtaagaccacactagtggaagaagttctcaggcaagttacgaaagataagttgtttgatgatgcagtcatggtacgagatgtgaaagttccaaacatggaagctattcaaaaagaaattgctgaaaagttaagtcttggagttttatcaaaccagactatccccggaagagccaatagcatatgtgatagaataaaagacaagaagacacttgtgattttggatgatgtctgggaagaaattgacttgaaaactctcgggcttccccacattcctacttgtaaaatactgctgacctctagaactcgaaagatgttaacttctgataagattaagcagagagggtttttgcttggcattttaggccaagatgaaacttggcttttatttgagaagaaagcaggtgatgttactaaagatcccgctataaaatccttagcaactcaagtagccctaagatgtggaggtttgcctgttttggttatcacagtagcaagagctttagaaaatagttctttaccaatgtgggaagatgccctgagatgccttgtcagctttgatgagaaagaagacttgacaaaaaaaacttactcgggtcttgaatggagttacactcgattgaatgagcagcttaagccattgttcttgttgtgtggtactactatacaggggaactctatttctttgacgaacttattgaaatatagtatgggtttgggtttttttaaagaccttacagttgaagcagctcgaaatgcattgtacacacaagttgataaacttaagagttcttgtctattgctagacggagatgataatacatgtgtcagaatgcatgatcttgtacatgatgttgctatccggattgcatctaaggatccacacgtcctagtaaaagatggagttgatcagttgaaagaatggccagaccaagattcatttaaaaggtgcagtaagatctcctggtcctgttgcaatatccccagtcttcctgaagtaccttggaaatgtcctgagctagaaatgtttcttttgcatggtaatggtaaaggaaatgatcaacattcgaaaattccaagcaatttttttgaagaaatgccaaaactcaaggtgttggatatttgcaatctgcctcttatgtcactacctccatctcttgaattgctaaaaatcaatcttcaaacattgtgtttagatggatgcacgttggaagacatagctcgagttggagagctaagcaacttggaaactcttagctttgctaactctaaggtcaaagagttgccgaaagaaatagtgaaattgactcatctgcggttgttggacttgtcggattgccctgagcttgaagtgatttcacctaatgtcatatcaagtttgacaaggctcgaagacttgagaatgaaaaacagttttgaaaaatgggaggctgagggagacatcaacgaaagaaagaatgctagtcttttggagctgaagcagttatctcgactaaccgcattagaaatatatattccagatgttgatattcttccaccaaacttgttctccaatatgctgaaaagatatcatatatatattggtggtgtgtggaagagcaggtggataaaaactatggctgaaacgacccttaatacactaaagctcgagctcactcccagcaatcaatcggatcaagggctaagaaggctgatgatgagatctgaagatttggccttggatgtgatggaaggtgttaataatagtttgtatcaattagacatcgaaggttctctgcacctgaaacgtctccaactccaaaagaatgttgatcttacatatatcattaacaagaaggttgtgttccccaacttaacaaccttgagcattcaaaaatgtgatcatttgagattcttgttcttatgttctatggctaaaagtttcgtacagctcaaacatcttgagatacgcaactgcaacagcatggatgaggtagtatcatcaacaacagagtacaatgaagaaaatatgaataacatgttctgtaagcttgaaactctggaactggaagaacttccacgcctcggtagaatctgcacaggaactcgtattgaatttccgtccttgaagaagttggttatagtgcgttgtagaaaattgaaggcactcatctgtgaccctatgagtgataaaagtacaagaatctgcaaagaaattgaagagagggagtcagaggagagcccaagtgttgaacatgagagtgttgcagaaggctgcctttttaacgacaaggtaagatttcctagcttggaggaattggaaatcgggcacttagacgagttgcagacaatatggcacaataacaaacttgctgatcaagactctttttgccgactcaaacaagttgaagttagattttgctggagtctgataagtatatttccgcctagtattatggggagattgaatgctctgaaaagatgtctaatcttaagttgcaactcgctaaaagtggtatttgaagtcggaggaattaatgctgaagagacacgtgtcaacagatcaaacccttatgatcagtggaaacctttgtactgtcaaaatcttgaattcttgagcgtaggcggggctgaccgtttgaaaaatatattcccagcctctttggccagaggacttcagcagctacgatttctgaacgtgggctattgtcctgatctgctggaaatagttggtgaggaagagggaggagtagaattaccaacgcctcctcagtttgtgttcccaaaggcaacacacgtggcattggagtctctgccccagcttaagagtttttatccgggaaagcatacttccacgtggccattactcaaagaattgagaataagattacgaagcggaattaaagaggtagaaatttcaatctttcaggataaacatgagtccggcccagtaaagtctatctttccaattaacaaggattcattccccaacttggaagaattggaagtcttcaacatggaaatttggtacggtacatccccagtaccaacagagtcgttcagcaacctaaaatatattacatctggttattgggcacctttctcccagcaagctacatcactcttccttcagcaattacacaatattgaaacaattgaagtgtttcgggctcctcccgaagaaatatttgtcagtgaaggaaacagtagttgtgacgaaatacatgcagttgggaccctaccaagcatacgaattttaaagtttaacggttgcgaaatgttgcatctagggaaggagaactccggatcaggaggcccaatttttccaaacttggaagttctagaggtgaggcatccttctctcagattaaagaatttggaatcatcagcgatttccttccggaatttaacaactttggaagtagttgattgtccgggcttggaacatttaataacttactcagtggctaaaagcttaatgcaactgacaacaatgaaagtgagtgaatgtccaagaattgcagtcatagtgacaacagacggtgatgatgcagcagaagagattactttcagtcgattgcaagttttaaccctttggggactgccaaaaatgcaaggcttttgctccggaagttgcattgtgaatctcccatccttgactactttatccatgagcaaccgccttaaattgaagattttccaagaaaagctaaagataacaagcaagcactctgacacggaggaggaggaggaagatagtgaggaggaggaggaggaagacaatgtggatgaggaaataggcgtgccgagtgctgaaacaaatattgcaagctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

1502

Amino Acids

170.05

Weight (kDa)

5.48

Isoelectric Point (pI)

43.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1088, 2286
Acc36I ACCTGC 2 cut(s) 1088, 2286
AccB1I GGYRCC 2 cut(s) 659, 3769
AccI GTMKAC 1 cut(s) 92
AccIII TCCGGA 4 cut(s) 1557, 3977, 4074, 4301
AciI CCGC 7 cut(s) 1119, 2011, 2193, 3119, 3300, 3570, 4354
AclWI GGATC 6 cut(s) 623, 1109, 1568, 1581, 2376, 3988
AcoI YGGCCR 3 cut(s) 1619, 3339, 3533
AcuI CTGAAG 8 cut(s) 449, 609, 1710, 2192, 2421, 3237, 3335, 3788
AcvI CACGTG 3 cut(s) 3227, 3472, 3531
AcyI GRCGYC 1 cut(s) 124
AfiI CCNNNNNNNGG 3 cut(s) 568, 2759, 3667
AflII CTTAAG 4 cut(s) 1328, 1478, 3166, 3497
AflIII ACRYGT 6 cut(s) 1517, 1579, 2712, 3224, 3226, 3469
AhlI ACTAGT 1 cut(s) 709
AjiI CACGTC 1 cut(s) 1582
AjnI CCWGG 1 cut(s) 1658
AleI CACNNNNGTG 1 cut(s) 710
Alw21I GWGCWC 1 cut(s) 2349
Alw26I GTCTC 7 cut(s) 29, 440, 454, 2127, 2489, 3215, 3489
AlwI GGATC 6 cut(s) 623, 1109, 1568, 1581, 2376, 3988
Ama87I CYCGRG 4 cut(s) 953, 1288, 1917, 2342
Aor13HI TCCGGA 4 cut(s) 1557, 3977, 4074, 4301
AoxI GGCC 8 cut(s) 373, 1060, 1619, 2409, 3339, 3533, 3619, 3988
ApeKI GCWGC 5 cut(s) 1324, 1442, 2949, 3355, 4226
AseI ATTAAT 1 cut(s) 3210
Asp700I GAANNNNTTC 6 cut(s) 720, 801, 1722, 2748, 3837, 4370
AspS9I GGNCC 4 cut(s) 1662, 3620, 3909, 3989
AsuC2I CCSGG 4 cut(s) 657, 861, 3513, 4110
AsuHPI GGTGA 6 cut(s) 257, 1112, 2046, 3419, 4033, 4229
AsuII TTCGAA 1 cut(s) 1763
AvaI CYCGRG 4 cut(s) 953, 1288, 1917, 2342
AvaII GGWCC 2 cut(s) 1662, 3909
BaeGI GKGCMC 2 cut(s) 3006, 3772
BalI TGGCCA 3 cut(s) 1621, 3341, 3535
BamHI GGATCC 1 cut(s) 1573
BanI GGYRCC 2 cut(s) 659, 3769
BanII GRGCYC 3 cut(s) 2349, 2918, 3847
BbrPI CACGTG 3 cut(s) 3227, 3472, 3531
BbsI GAAGAC 7 cut(s) 908, 1272, 1676, 1914, 2094, 3676, 4458
Bbv12I GWGCWC 1 cut(s) 2349
BbvCI CCTCAGC 1 cut(s) 2127
BbvI GCAGC 5 cut(s) 1336, 1454, 2936, 3367, 4238
BccI CCATC 6 cut(s) 447, 1589, 1855, 1886, 2416, 4333
BceAI ACGGC 2 cut(s) 82, 128
BcgI CGANNNNNNTGC 4 cut(s) 2165, 2199, 3881, 3915
BciT130I CCWGG 1 cut(s) 1660
BclI TGATCA 5 cut(s) 1603, 1753, 2575, 3049, 3250
BcnI CCSGG 4 cut(s) 657, 861, 3513, 4110
BcoDI GTCTC 7 cut(s) 29, 440, 454, 2127, 2489, 3215, 3489
BcuI ACTAGT 1 cut(s) 709
BfrI CTTAAG 4 cut(s) 1328, 1478, 3166, 3497
BfuAI ACCTGC 2 cut(s) 1088, 2286
BglI GCCNNNNNGGC 1 cut(s) 3338
BglII AGATCT 2 cut(s) 1653, 2396
BisI GCNGC 5 cut(s) 1325, 1443, 2950, 3356, 4227
BlpI GCTNAGC 1 cut(s) 1931
BlsI GCNGC 5 cut(s) 1326, 1444, 2951, 3357, 4228
Bme1390I CCNGG 5 cut(s) 657, 861, 1660, 3513, 4110
Bme18I GGWCC 2 cut(s) 1662, 3909
BmeT110I CYCGRG 4 cut(s) 953, 1288, 1917, 2342
BmgBI CACGTC 1 cut(s) 1582
BmgT120I GGNCC 4 cut(s) 1662, 3620, 3909, 3989
BmiI GGNNCC 6 cut(s) 661, 1575, 3771, 3846, 3910, 3911
BmrFI CCNGG 5 cut(s) 657, 861, 1660, 3513, 4110
BmrI ACTGGG 3 cut(s) 1674, 3617, 3710
BmsI GCATC 8 cut(s) 748, 1219, 1229, 1574, 1886, 3967, 4036, 4213
BmuI ACTGGG 3 cut(s) 1674, 3617, 3710
BoxI GACNNNNGTC 1 cut(s) 3227
BpiI GAAGAC 7 cut(s) 908, 1272, 1676, 1914, 2094, 3676, 4458
BplI GAGNNNNNCTC 2 cut(s) 1294, 1326
BpmI CTGGAG 2 cut(s) 363, 3118
Bpu10I CCTNAGC 4 cut(s) 1132, 1710, 2037, 2127
Bpu1102I GCTNAGC 1 cut(s) 1931
Bpu14I TTCGAA 1 cut(s) 1763
BpuEI CTTGAG 7 cut(s) 162, 1125, 1787, 2113, 2578, 2657, 3310
BpuMI CCSGG 4 cut(s) 657, 861, 3513, 4110
BsaAI YACGTR 3 cut(s) 3227, 3472, 3531
BsaHI GRCGYC 1 cut(s) 124
BsaI GGTCTC 1 cut(s) 29
BsaJI CCNNGG 5 cut(s) 18, 859, 1697, 2412, 2758
BsaWI WCCGGW 4 cut(s) 1557, 3977, 4074, 4301
BsaXI ACNNNNNCTCC 2 cut(s) 2228, 2258
Bsc4I CCNNNNNNNGG 3 cut(s) 568, 2759, 3667
Bse1I ACTGG 5 cut(s) 346, 1680, 2745, 3623, 3716
BseAI TCCGGA 4 cut(s) 1557, 3977, 4074, 4301
BseBI CCWGG 1 cut(s) 1660
BseDI CCNNGG 5 cut(s) 18, 859, 1697, 2412, 2758
BseLI CCNNNNNNNGG 3 cut(s) 568, 2759, 3667
BseMII CTCAG 9 cut(s) 305, 739, 1226, 1701, 2028, 2118, 3458, 4051, 4149
BseNI ACTGG 5 cut(s) 346, 1680, 2745, 3623, 3716
BseSI GKGCMC 2 cut(s) 3006, 3772
BseXI GCAGC 5 cut(s) 1336, 1454, 2936, 3367, 4238
BseYI CCCAGC 4 cut(s) 2354, 3328, 3492, 3780
BsgI GTGCAG 3 cut(s) 1666, 2456, 2755
BshFI GGCC 8 cut(s) 375, 1062, 1621, 2411, 3341, 3535, 3621, 3990
BshNI GGYRCC 2 cut(s) 659, 3769
BsiHKAI GWGCWC 1 cut(s) 2349
BsiHKCI CYCGRG 4 cut(s) 953, 1288, 1917, 2342
BsiSI CCGG 9 cut(s) 657, 861, 1558, 3512, 3618, 3978, 4075, 4109, 4302
BslFI GGGAC 4 cut(s) 135, 639, 3922, 4287
BslI CCNNNNNNNGG 3 cut(s) 568, 2759, 3667
BsmAI GTCTC 7 cut(s) 29, 440, 454, 2127, 2489, 3215, 3489
BsmBI CGTCTC 2 cut(s) 440, 2489
BsmFI GGGAC 4 cut(s) 135, 639, 3922, 4287
BsmI GAATGC 4 cut(s) 1533, 2158, 2562, 3148
BsnI GGCC 8 cut(s) 375, 1062, 1621, 2411, 3341, 3535, 3621, 3990
Bso31I GGTCTC 1 cut(s) 29
BsoBI CYCGRG 4 cut(s) 953, 1288, 1917, 2342
Bsp119I TTCGAA 1 cut(s) 1763
Bsp1286I GDGCHC 5 cut(s) 2349, 2918, 3006, 3772, 3847
Bsp13I TCCGGA 4 cut(s) 1557, 3977, 4074, 4301
Bsp1407I TGTACA 2 cut(s) 1458, 1540
Bsp1720I GCTNAGC 1 cut(s) 1931
BspACI CCGC 7 cut(s) 1119, 2011, 2193, 3119, 3300, 3570, 4354
BspANI GGCC 8 cut(s) 375, 1062, 1621, 2411, 3341, 3535, 3621, 3990
BspCNI CTCAG 9 cut(s) 304, 738, 1227, 1702, 2029, 2119, 3457, 4050, 4148
BspEI TCCGGA 4 cut(s) 1557, 3977, 4074, 4301
BspHI TCATGA 1 cut(s) 297
BspLI GGNNCC 6 cut(s) 661, 1575, 3771, 3846, 3910, 3911
BspMI ACCTGC 2 cut(s) 1088, 2286
BspPI GGATC 6 cut(s) 623, 1109, 1568, 1581, 2376, 3988
BspQI GCTCTTC 3 cut(s) 381, 859, 2285
BspT104I TTCGAA 1 cut(s) 1763
BspT107I GGYRCC 2 cut(s) 659, 3769
BspTI CTTAAG 4 cut(s) 1328, 1478, 3166, 3497
BspTNI GGTCTC 1 cut(s) 29
BsrGI TGTACA 2 cut(s) 1458, 1540
BsrI ACTGG 5 cut(s) 346, 1680, 2745, 3623, 3716
BssECI CCNNGG 5 cut(s) 18, 859, 1697, 2412, 2758
BssNAI GTATAC 1 cut(s) 93
BssNI GRCGYC 1 cut(s) 124
BssT1I CCWWGG 2 cut(s) 1697, 2412
Bst1107I GTATAC 1 cut(s) 93
Bst2UI CCWGG 1 cut(s) 1660
Bst6I CTCTTC 9 cut(s) 235, 381, 859, 2285, 2889, 3213, 3408, 3803, 4227
BstACI GRCGYC 1 cut(s) 124
BstAFI CTTAAG 4 cut(s) 1328, 1478, 3166, 3497
BstAUI TGTACA 2 cut(s) 1458, 1540
BstBAI YACGTR 3 cut(s) 3227, 3472, 3531
BstBI TTCGAA 1 cut(s) 1763
BstC8I GCNNGC 4 cut(s) 3786, 4400, 4478, 4504
BstDSI CCRYGG 1 cut(s) 18
BstMAI GTCTC 7 cut(s) 29, 440, 454, 2127, 2489, 3215, 3489
BstMWI GCNNNNNNNGC 7 cut(s) 1059, 1248, 1330, 1451, 2383, 3338, 4285
BstNI CCWGG 1 cut(s) 1660
BstNSI RCATGY 3 cut(s) 1521, 2716, 3902
BstPAI GACNNNNGTC 1 cut(s) 3227
BstSCI CCNGG 5 cut(s) 655, 859, 1658, 3511, 4108
BstSLI GKGCMC 2 cut(s) 3006, 3772
BstV1I GCAGC 5 cut(s) 1336, 1454, 2936, 3367, 4238
BstV2I GAAGAC 7 cut(s) 908, 1272, 1676, 1914, 2094, 3676, 4458
BstX2I RGATCY 5 cut(s) 615, 1114, 1573, 1653, 2396
BstXI CCANNNNNNTGG 2 cut(s) 341, 712
BstYI RGATCY 5 cut(s) 615, 1114, 1573, 1653, 2396
BstZ17I GTATAC 1 cut(s) 93
BsuRI GGCC 8 cut(s) 375, 1062, 1621, 2411, 3341, 3535, 3621, 3990
BtgI CCRYGG 1 cut(s) 18
BtrI CACGTC 1 cut(s) 1582
BtsIMutI CAGTG 4 cut(s) 559, 3260, 3874, 4143
BveI ACCTGC 2 cut(s) 1088, 2286
Cac8I GCNNGC 4 cut(s) 3786, 4400, 4478, 4504
CciI TCATGA 1 cut(s) 297
Cfr13I GGNCC 4 cut(s) 1662, 3620, 3909, 3989
CseI GACGC 3 cut(s) 132, 184, 422
CspCI CAANNNNNGTGG 6 cut(s) 480, 515, 2220, 2255, 3453, 3488
DraI TTTAAA 3 cut(s) 1423, 1639, 3933
EaeI YGGCCR 3 cut(s) 1619, 3339, 3533
Eam1104I CTCTTC 9 cut(s) 235, 381, 859, 2285, 2889, 3213, 3408, 3803, 4227
EarI CTCTTC 9 cut(s) 235, 381, 859, 2285, 2889, 3213, 3408, 3803, 4227
EciI GGCGGA 1 cut(s) 3108
Ecl136II GAGCTC 1 cut(s) 2347
Eco130I CCWWGG 2 cut(s) 1697, 2412
Eco24I GRGCYC 3 cut(s) 2349, 2918, 3847
Eco31I GGTCTC 1 cut(s) 29
Eco32I GATATC 1 cut(s) 2264
Eco47I GGWCC 2 cut(s) 1662, 3909
Eco53kI GAGCTC 1 cut(s) 2347
Eco57I CTGAAG 8 cut(s) 449, 609, 1710, 2192, 2421, 3237, 3335, 3788
Eco72I CACGTG 3 cut(s) 3227, 3472, 3531
Eco88I CYCGRG 4 cut(s) 953, 1288, 1917, 2342
EcoICRI GAGCTC 1 cut(s) 2347
EcoO109I RGGNCCY 1 cut(s) 3909
EcoRI GAATTC 2 cut(s) 314, 3284
EcoRII CCWGG 1 cut(s) 1658
EcoRV GATATC 1 cut(s) 2264
EcoT14I CCWWGG 2 cut(s) 1697, 2412
EcoT22I ATGCAT 2 cut(s) 1456, 1533
EcoT38I GRGCYC 3 cut(s) 2349, 2918, 3847
ErhI CCWWGG 2 cut(s) 1697, 2412
Esp3I CGTCTC 2 cut(s) 440, 2489
FalI AAGNNNNNCTT 4 cut(s) 2937, 2969, 3620, 3652
FaqI GGGAC 4 cut(s) 135, 639, 3922, 4287
FauI CCCGC 2 cut(s) 1126, 3293
FauNDI CATATG 1 cut(s) 878
FbaI TGATCA 5 cut(s) 1603, 1753, 2575, 3049, 3250
FblI GTMKAC 1 cut(s) 92
Fnu4HI GCNGC 5 cut(s) 1325, 1443, 2950, 3356, 4227
FriOI GRGCYC 3 cut(s) 2349, 2918, 3847
Fsp4HI GCNGC 5 cut(s) 1325, 1443, 2950, 3356, 4227
GluI GCNGC 5 cut(s) 1325, 1443, 2950, 3356, 4227
GsaI CCCAGC 4 cut(s) 2358, 3332, 3496, 3784
GsuI CTGGAG 2 cut(s) 363, 3118
HaeIII GGCC 8 cut(s) 375, 1062, 1621, 2411, 3341, 3535, 3621, 3990
HapII CCGG 9 cut(s) 657, 861, 1558, 3512, 3618, 3978, 4075, 4109, 4302
HgaI GACGC 3 cut(s) 132, 184, 422
Hin1I GRCGYC 1 cut(s) 124
HincII GTYRAC 3 cut(s) 489, 1014, 3232
HindII GTYRAC 3 cut(s) 489, 1014, 3232
HindIII AAGCTT 2 cut(s) 2723, 4147
HpaI GTTAAC 1 cut(s) 1014
HpaII CCGG 9 cut(s) 657, 861, 1558, 3512, 3618, 3978, 4075, 4109, 4302
HphI GGTGA 6 cut(s) 257, 1112, 2046, 3419, 4033, 4229
Hpy166II GTNNAC 5 cut(s) 93, 489, 1014, 1461, 3232
Hpy8I GTNNAC 5 cut(s) 93, 489, 1014, 1461, 3232
Hpy99I CGWCG 1 cut(s) 200
HpyCH4IV ACGT 8 cut(s) 415, 1581, 1901, 2482, 3226, 3372, 3471, 3530
HpyF10VI GCNNNNNNNGC 7 cut(s) 1059, 1248, 1330, 1451, 2383, 3338, 4285
HpySE526I ACGT 8 cut(s) 415, 1581, 1901, 2482, 3226, 3372, 3471, 3530
Hsp92I GRCGYC 1 cut(s) 124
KflI GGGWCCC 1 cut(s) 3909
Kpn2I TCCGGA 4 cut(s) 1557, 3977, 4074, 4301
Ksp22I TGATCA 5 cut(s) 1603, 1753, 2575, 3049, 3250
KspAI GTTAAC 1 cut(s) 1014
LguI GCTCTTC 3 cut(s) 381, 859, 2285
LmnI GCTCC 3 cut(s) 2167, 3850, 4304
Lsp1109I GCAGC 5 cut(s) 1336, 1454, 2936, 3367, 4238
LweI GCATC 8 cut(s) 748, 1219, 1229, 1574, 1886, 3967, 4036, 4213
MaeII ACGT 8 cut(s) 415, 1581, 1901, 2482, 3226, 3372, 3471, 3530
MaeIII GTNAC 8 cut(s) 62, 733, 1105, 1304, 1836, 2849, 3887, 4204
MfeI CAATTG 2 cut(s) 57, 3828
MflI RGATCY 5 cut(s) 615, 1114, 1573, 1653, 2396
MhlI GDGCHC 5 cut(s) 2349, 2918, 3006, 3772, 3847
MlsI TGGCCA 3 cut(s) 1621, 3341, 3535
MluNI TGGCCA 3 cut(s) 1621, 3341, 3535
MlyI GAGTC 9 cut(s) 169, 1996, 2912, 3050, 3063, 3109, 3491, 3623, 3737
MmeI TCCRAC 8 cut(s) 55, 1791, 1884, 1903, 1998, 2007, 2512, 3181
Mox20I TGGCCA 3 cut(s) 1621, 3341, 3535
Mph1103I ATGCAT 2 cut(s) 1456, 1533
MroI TCCGGA 4 cut(s) 1557, 3977, 4074, 4301
MroXI GAANNNNTTC 6 cut(s) 720, 801, 1722, 2748, 3837, 4370
MscI TGGCCA 3 cut(s) 1621, 3341, 3535
MslI CAYNNNNRTG 6 cut(s) 38, 261, 674, 710, 1737, 2934
Msp20I TGGCCA 3 cut(s) 1621, 3341, 3535
MspCI CTTAAG 4 cut(s) 1328, 1478, 3166, 3497
MspI CCGG 9 cut(s) 657, 861, 1558, 3512, 3618, 3978, 4075, 4109, 4302
MspR9I CCNGG 5 cut(s) 657, 861, 1660, 3513, 4110
MunI CAATTG 2 cut(s) 57, 3828
Mva1269I GAATGC 4 cut(s) 1533, 2158, 2562, 3148
MvaI CCWGG 1 cut(s) 1660
MwoI GCNNNNNNNGC 7 cut(s) 1059, 1248, 1330, 1451, 2383, 3338, 4285
NciI CCSGG 4 cut(s) 657, 861, 3513, 4110
NdeI CATATG 1 cut(s) 878
NlaIV GGNNCC 6 cut(s) 661, 1575, 3771, 3846, 3910, 3911
NmeAIII GCCGAG 2 cut(s) 112, 4506
NmuCI GTSAC 4 cut(s) 1836, 2849, 3887, 4204
NsiI ATGCAT 2 cut(s) 1456, 1533
NspI RCATGY 3 cut(s) 1521, 2716, 3902
NspV TTCGAA 1 cut(s) 1763
OliI CACNNNNGTG 1 cut(s) 710
PaeR7I CTCGAG 2 cut(s) 1917, 2342
PagI TCATGA 1 cut(s) 297
PaqCI CACCTGC 2 cut(s) 1088, 2286
PciI ACATGT 2 cut(s) 1517, 2712
PciSI GCTCTTC 3 cut(s) 381, 859, 2285
PctI GAATGC 4 cut(s) 1533, 2158, 2562, 3148
PdmI GAANNNNTTC 6 cut(s) 720, 801, 1722, 2748, 3837, 4370
PfeI GAWTC 9 cut(s) 157, 608, 1631, 2586, 2766, 2877, 3653, 4055, 4318
PfoI TCCNGGA 1 cut(s) 3511
PkrI GCNGC 5 cut(s) 1326, 1444, 2951, 3357, 4228
PleI GAGTC 9 cut(s) 169, 1996, 2911, 3050, 3063, 3108, 3490, 3622, 3736
PmaCI CACGTG 3 cut(s) 3227, 3472, 3531
PmlI CACGTG 3 cut(s) 3227, 3472, 3531
PpsI GAGTC 9 cut(s) 169, 1996, 2911, 3050, 3063, 3108, 3490, 3622, 3736
Ppu21I YACGTR 3 cut(s) 3227, 3472, 3531
PpuMI RGGWCCY 1 cut(s) 3909
PscI ACATGT 2 cut(s) 1517, 2712
PshAI GACNNNNGTC 1 cut(s) 3227
PshBI ATTAAT 1 cut(s) 3210
Psp124BI GAGCTC 1 cut(s) 2349
Psp5II RGGWCCY 1 cut(s) 3909
Psp6I CCWGG 1 cut(s) 1658
PspCI CACGTG 3 cut(s) 3227, 3472, 3531
PspFI CCCAGC 4 cut(s) 2354, 3328, 3492, 3780
PspGI CCWGG 1 cut(s) 1658
PspN4I GGNNCC 6 cut(s) 661, 1575, 3771, 3846, 3910, 3911
PspPI GGNCC 4 cut(s) 1662, 3620, 3909, 3989
PspPPI RGGWCCY 1 cut(s) 3909
PspXI VCTCGAGB 2 cut(s) 1917, 2342
PsuI RGATCY 5 cut(s) 615, 1114, 1573, 1653, 2396
RseI CAYNNNNRTG 6 cut(s) 38, 261, 674, 710, 1737, 2934
SacI GAGCTC 1 cut(s) 2349
SapI GCTCTTC 3 cut(s) 381, 859, 2285
SatI GCNGC 5 cut(s) 1325, 1443, 2950, 3356, 4227
Sau96I GGNCC 4 cut(s) 1662, 3620, 3909, 3989
SchI GAGTC 9 cut(s) 169, 1996, 2912, 3050, 3063, 3109, 3491, 3623, 3737
ScrFI CCNGG 5 cut(s) 657, 861, 1660, 3513, 4110
SduI GDGCHC 5 cut(s) 2349, 2918, 3006, 3772, 3847
SfaNI GCATC 8 cut(s) 748, 1219, 1229, 1574, 1886, 3967, 4036, 4213
Sfr274I CTCGAG 2 cut(s) 1917, 2342
SfuI TTCGAA 1 cut(s) 1763
SinI GGWCC 2 cut(s) 1662, 3909
SlaI CTCGAG 2 cut(s) 1917, 2342
SmiMI CAYNNNNRTG 6 cut(s) 38, 261, 674, 710, 1737, 2934
SpeI ACTAGT 1 cut(s) 709
SsiI CCGC 7 cut(s) 1119, 2011, 2193, 3119, 3300, 3570, 4354
SspI AATATT 3 cut(s) 3820, 3861, 4498
SstI GAGCTC 1 cut(s) 2349
StyD4I CCNGG 5 cut(s) 655, 859, 1658, 3511, 4108
StyI CCWWGG 2 cut(s) 1697, 2412
TaiI ACGT 8 cut(s) 418, 1584, 1904, 2485, 3229, 3375, 3474, 3533
TatI WGTACW 5 cut(s) 1458, 1540, 2688, 2870, 3267
TfiI GAWTC 9 cut(s) 157, 608, 1631, 2586, 2766, 2877, 3653, 4055, 4318
TscAI CASTG 4 cut(s) 559, 3260, 3874, 4143
TseFI GTSAC 4 cut(s) 1836, 2849, 3887, 4204
TseI GCWGC 5 cut(s) 1324, 1442, 2949, 3355, 4226
Tsp45I GTSAC 4 cut(s) 1836, 2849, 3887, 4204
TspGWI ACGGA 5 cut(s) 7, 323, 1518, 2784, 4427
TspRI CASTG 4 cut(s) 559, 3260, 3874, 4143
Vha464I CTTAAG 4 cut(s) 1328, 1478, 3166, 3497
VpaK11BI GGWCC 2 cut(s) 1662, 3909
VspI ATTAAT 1 cut(s) 3210
XbaI TCTAGA 2 cut(s) 995, 4015
XceI RCATGY 3 cut(s) 1521, 2716, 3902
XhoI CTCGAG 2 cut(s) 1917, 2342
XmiI GTMKAC 1 cut(s) 92
XmnI GAANNNNTTC 6 cut(s) 720, 801, 1722, 2748, 3837, 4370
Zsp2I ATGCAT 2 cut(s) 1456, 1533
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.