Rh5BG124300

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
Physical Location & Seq
Forward (+)
11775389 .. 11784017
8629 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG124300.1

Sequence Viewer

Length: 2679 bp
ATGGCAAAGCATCCGGGGGGAAAGCCTGACTCCTCTCCTAAAGAGACGGACTACTTGCTTGCGGCGTCACCTTCAAACGCTTACGCTGTTGATGTTAGAGGTGATGAAGGTGAAGTCATGACCAGAATCGATTACGACCAGAGCATGCAGAATCAATCCCAGATGATGAAGCCTTATGACGGAATGGACTTTCTTTCAAAGATTGCTGACTACACGATTGAACCTGTTATACGTCTACTGGGACGCCAAGTGGGTTATGTAATTCACTGCAAAACCAACCTTCAAAAATTACAGGCTCAAGTGGAAGAATTGAAAGCTGCCAGAGAGGCGACAGAGAATAAGGTTGCTGAAGCTAAAAAAAAAGGTGAAAAAATTCAACCTGATGTCCAGTTCTGGCTGAAAAAAGCGGGTGAGATCACTGCACAGACAGATAAATTGTTGAATCATGAAAGCCAAGCAAAGCTGAAATGTTTCCATGGGTTTTGTCCTAATTTGACTACTCGTCATCAGCTTAGCAGGGAATCAACAAAACTGGTACAGAAGGTTGTTGAACAGTATGAAAAAAGAGAATTTTCCCAAGTTTCGTGCGGTATTCATCGGAAAGTGGTATGGGAAATAACTACGGGAGATTACCAGGCTTTTCAATCAAGGATGCCAATTGTGAAGGAAATCATGGATCATCTGGAAGACTCTGATATTCAGAGGATAGGGTTGTTTGGAATTGGAGGGGTGGGTAAAACCACATTGGTCAAAGAAGTTTACAAGCAAGCTTCAGGGGATAAAAAGTTATTTGATGATGTGATTATGTTATTAGCTGTGAAAAGTAACCCAGACCCTGAAGCAATTCAAAAGAAAATTCTTGAAAAGTTGGGCATGGTCATTAATGAAAATGAAAATGAAACTGTAGAAGGAAGAGCGAGTCGTCTTTGTGCCCAGATACAAGGCAAAAAGATTCTTGTGATTTTGGATGATGTTCAAGAAAAAATTGATTTGGAGGTTGTGGGACTTCCCCGTCTGCCAACTTGTAAAATTTTGGTGACATGCAGAACTCGACATGTTTTATCTTTTAATGAGATGCGTGCAGATAAAGAATTTTCGCTCGACCTTTTGAGTGAAGAAGAAACGTGGAGTTTATTTGTGAAGATAGCAGGTGACATTGTTAAACACAAAGGTCAGATACGAGATGTAGCAGTCCAAGTAGCCAAAAAATGTGGAGGTTTGCCCTTATTAATCGTCACTGTTGCAAGTGCTTTAAAAGGGAAAAATAAATTAGGTCAATGGAAAGATGCCTTAAAACGACTTAAAGAGTTTGAGAAAGAAGAATTGACAGAAAAGGCATACCTGGCTTTGGAGTGGAGTTATAACCAATTAGATGATAAGAAGCTTAAACAGTTGTTCTTGCTAGCCGGAATCATAGTGGGGCAGAACCATATTTATGTGCAAGACTTGTTGAGATATGGTGTGGGTTTAGGTTTGTTTACAAATGGGAATACATTGGAAGAAGCACAGAATGCATTGGATACACTGCTTGGAAAGCTTAAAGATTCTTGCTTATTGTTGGACGGTGATGTTGACGACAAGGTCAGAATGCATGATCTTGTATGTCATGTTGCTAAGCGGATTGCATACAAGAATCATTACATGTTATCAATAGAATCTGGAGGTGAGTTTAAAGGATGGCCAAATAAGGATTTCTTGAAAAAGTGCACTAGGATCTCTCTCATACATGAAAATATTCCCACACTTCCCAAAATACCTATGGAATGCCCAGAACTCGAGATGTTCTACTTGCATAACACTAATGATGATAACACGGTGCAAATCCCATCCAACTTCTTCAGCAAGATGGAAAAACTTAAAGTGCTGGATTTAACCAACATGGATATACCATCATTGCCTTTATCTCTTCAATACTTGAAGAAGCTTCAAACGTTGTGTTTAGATGGCTGCAAATTGGGAGATATAACTCTACTGGGGCAGCTAACTAGCTTGGAAATTCTTAGTTTTTCAAGATCCAATCTTAAACACTTGCCTAAAGAAGTAAGGCAATTGACTTGTCTTCGGTTGCTGGATTTATCTTATTGCTATGAACTTGAAGTGATTTCGCCTACTGTTATATCAAGTTTGGTGAGACTGGAAGATTTGAGAATGAGAAACAGTTTTAAAAAATGGGAGGTTGAAGGTGGAGGAAGTAATGCAAGCCTTTCAGAGCTGAAGCATTTGTCTCGGCTATCTGCAGTAGAAATATGTATTCCGAATGGTGATGCTCTTCCAGCAAACTTGTTCTCCCACAAGTTAGAAAGATTCAATATTTTTATTGGGGATGCGTGGGATGCATGGTATGCGAGATCTCCATGGAAGAAACTTAGGAATACGATGACCCTCAACACATTAAAACTCAAGCTTACTAAAGGATTAGATGAAAGCCTAAAATCGCTACTAAAGAATTCTGGAGATTTGTCCTTAGATGAGACAGAGGTTGTTATTGTCCATGATTTGAATGCCGAAGATTTTGAGAATATGATAAATCTCCAGCTCCAAAACAATGTTGATTTTATGGCTATGGTTAACAAGAAGTCCTCGGCACCCTTGATGTGCGTAGCTGCTGATCTTAATCTCGTTCAAGCTATGCCGGTCCTAGTGATCGGCACATGTTGCTTGCGCATATGCATAAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

892

Amino Acids

100.74

Weight (kDa)

7.23

Isoelectric Point (pI)

33.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 221 - 384 6.4e-28 NB-ARC domain
LRR_14 PF23598 605 - 751 1.7e-11 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1362
AarI CACCTGC 1 cut(s) 1139
AasI GACNNNNNNGTC 2 cut(s) 1011, 1580
Acc16I TGCGCA 1 cut(s) 2663
Acc36I ACCTGC 1 cut(s) 1139
AccB1I GGYRCC 1 cut(s) 2584
AccI GTMKAC 1 cut(s) 235
AciI CCGC 4 cut(s) 62, 407, 588, 1618
AclI AACGTT 1 cut(s) 1931
AclWI GGATC 3 cut(s) 684, 1721, 2007
AcoI YGGCCR 1 cut(s) 1679
AcsI RAATTY 7 cut(s) 372, 569, 855, 1029, 1091, 1995, 2446
AcuI CTGAAG 5 cut(s) 369, 756, 858, 1822, 2234
AcyI GRCGYC 2 cut(s) 65, 244
AfaI GTAC 1 cut(s) 537
AfiI CCNNNNNNNGG 2 cut(s) 179, 1348
AflIII ACRYGT 3 cut(s) 1054, 1641, 2651
AhdI GACNNNNNGTC 1 cut(s) 501
AjnI CCWGG 2 cut(s) 633, 1341
Alw21I GWGCWC 1 cut(s) 1709
Alw26I GTCTC 4 cut(s) 38, 2125, 2229, 2465
Alw44I GTGCAC 1 cut(s) 1705
AlwI GGATC 3 cut(s) 684, 1721, 2007
AlwNI CAGNNNCTG 1 cut(s) 836
Ama87I CYCGRG 1 cut(s) 1775
AoxI GGCC 1 cut(s) 1679
ApaLI GTGCAC 1 cut(s) 1705
ApeKI GCWGC 4 cut(s) 317, 1947, 1978, 2603
ApoI RAATTY 7 cut(s) 372, 569, 855, 1029, 1091, 1995, 2446
AseI ATTAAT 2 cut(s) 882, 1229
Asp700I GAANNNNTTC 4 cut(s) 372, 470, 843, 1734
AspLEI GCGC 1 cut(s) 2664
AspS9I GGNCC 1 cut(s) 2635
AsuC2I CCSGG 1 cut(s) 15
AsuNHI GCTAGC 1 cut(s) 1402
AvaI CYCGRG 1 cut(s) 1775
AvaII GGWCC 1 cut(s) 2635
BaeGI GKGCMC 2 cut(s) 934, 1709
BalI TGGCCA 1 cut(s) 1681
BanI GGYRCC 1 cut(s) 2584
BbsI GAAGAC 2 cut(s) 693, 2051
Bbv12I GWGCWC 1 cut(s) 1709
BbvI GCAGC 4 cut(s) 304, 1934, 1990, 2590
BccI CCATC 5 cut(s) 1671, 1834, 1840, 1897, 1937
BcgI CGANNNNNNTGC 2 cut(s) 2207, 2241
BciT130I CCWGG 2 cut(s) 635, 1343
BciVI GTATCC 1 cut(s) 1513
BcnI CCSGG 1 cut(s) 15
BcoDI GTCTC 4 cut(s) 38, 2125, 2229, 2465
BfaI CTAG 4 cut(s) 1403, 1710, 1986, 2639
BfmI CTRYAG 2 cut(s) 903, 2235
BfuAI ACCTGC 1 cut(s) 1139
BfuI GTATCC 1 cut(s) 1513
BglI GCCNNNNNGGC 1 cut(s) 326
BglII AGATCT 1 cut(s) 2348
BisI GCNGC 5 cut(s) 63, 318, 1948, 1979, 2604
BlpI GCTNAGC 2 cut(s) 512, 1614
BlsI GCNGC 5 cut(s) 64, 319, 1949, 1980, 2605
Bme1390I CCNGG 3 cut(s) 15, 635, 1343
Bme18I GGWCC 1 cut(s) 2635
BmeRI GACNNNNNGTC 1 cut(s) 501
BmeT110I CYCGRG 1 cut(s) 1775
BmgT120I GGNCC 1 cut(s) 2635
BmiI GGNNCC 1 cut(s) 2586
BmrFI CCNGG 3 cut(s) 15, 635, 1343
BmrI ACTGGG 2 cut(s) 248, 1982
BmsI GCATC 7 cut(s) 19, 642, 1065, 1276, 2254, 2314, 2323
BmtI GCTAGC 1 cut(s) 1406
BmuI ACTGGG 2 cut(s) 248, 1982
BpiI GAAGAC 2 cut(s) 693, 2051
BpmI CTGGAG 3 cut(s) 1680, 2472, 2516
Bpu1102I GCTNAGC 2 cut(s) 512, 1614
BpuEI CTTGAG 2 cut(s) 282, 2384
BpuMI CCSGG 1 cut(s) 15
Bsa29I ATCGAT 1 cut(s) 129
BsaBI GATNNNNATC 1 cut(s) 2613
BsaHI GRCGYC 2 cut(s) 65, 244
BsaJI CCNNGG 4 cut(s) 14, 475, 2354, 2580
BsaXI ACNNNNNCTCC 2 cut(s) 2270, 2300
Bsc4I CCNNNNNNNGG 2 cut(s) 179, 1348
Bse118I RCCGGY 1 cut(s) 2632
Bse1I ACTGG 5 cut(s) 243, 388, 537, 1977, 2139
Bse3DI GCAATG 1 cut(s) 1892
Bse8I GATNNNNATC 1 cut(s) 2613
BseBI CCWGG 2 cut(s) 635, 1343
BseCI ATCGAT 1 cut(s) 129
BseDI CCNNGG 4 cut(s) 14, 475, 2354, 2580
BseGI GGATG 7 cut(s) 10, 657, 973, 1682, 1826, 2329, 2338
BseJI GATNNNNATC 1 cut(s) 2613
BseLI CCNNNNNNNGG 2 cut(s) 179, 1348
BseMI GCAATG 1 cut(s) 1892
BseNI ACTGG 5 cut(s) 243, 388, 537, 1977, 2139
BseRI GAGGAG 1 cut(s) 22
BseSI GKGCMC 2 cut(s) 934, 1709
BseXI GCAGC 4 cut(s) 304, 1934, 1990, 2590
BsgI GTGCAG 2 cut(s) 405, 1101
BshFI GGCC 1 cut(s) 1681
BshNI GGYRCC 1 cut(s) 2584
BshVI ATCGAT 1 cut(s) 129
BsiHKAI GWGCWC 1 cut(s) 1709
BsiHKCI CYCGRG 1 cut(s) 1775
BsiSI CCGG 3 cut(s) 14, 1407, 2633
BslFI GGGAC 2 cut(s) 255, 1017
BslI CCNNNNNNNGG 2 cut(s) 179, 1348
BsmAI GTCTC 4 cut(s) 38, 2125, 2229, 2465
BsmBI CGTCTC 1 cut(s) 38
BsmFI GGGAC 2 cut(s) 255, 1017
BsmI GAATGC 4 cut(s) 1516, 1593, 1769, 2506
BsnI GGCC 1 cut(s) 1681
BsoBI CYCGRG 1 cut(s) 1775
Bsp1286I GDGCHC 2 cut(s) 934, 1709
Bsp143I GATC 8 cut(s) 414, 676, 1594, 1713, 2012, 2348, 2608, 2643
Bsp1720I GCTNAGC 2 cut(s) 512, 1614
Bsp19I CCATGG 2 cut(s) 475, 2354
BspACI CCGC 4 cut(s) 62, 407, 588, 1618
BspANI GGCC 1 cut(s) 1681
BspDI ATCGAT 1 cut(s) 129
BspHI TCATGA 2 cut(s) 117, 445
BspLI GGNNCC 1 cut(s) 2586
BspMAI CTGCAG 1 cut(s) 2239
BspMI ACCTGC 1 cut(s) 1139
BspOI GCTAGC 1 cut(s) 1406
BspPI GGATC 3 cut(s) 684, 1721, 2007
BspQI GCTCTTC 2 cut(s) 907, 2274
BspT107I GGYRCC 1 cut(s) 2584
BsrDI GCAATG 1 cut(s) 1892
BsrFI RCCGGY 1 cut(s) 2632
BsrI ACTGG 5 cut(s) 243, 388, 537, 1977, 2139
BssAI RCCGGY 1 cut(s) 2632
BssECI CCNNGG 4 cut(s) 14, 475, 2354, 2580
BssMI GATC 8 cut(s) 414, 676, 1594, 1713, 2012, 2348, 2608, 2643
BssNI GRCGYC 2 cut(s) 65, 244
BssT1I CCWWGG 2 cut(s) 475, 2354
Bst2UI CCWGG 2 cut(s) 635, 1343
Bst4CI ACNGT 8 cut(s) 555, 904, 1240, 1392, 1565, 1816, 2113, 2159
Bst6I CTCTTC 3 cut(s) 907, 1911, 2274
BstACI GRCGYC 2 cut(s) 65, 244
BstAPI GCANNNNNTGC 3 cut(s) 1511, 2342, 2655
BstC8I GCNNGC 7 cut(s) 60, 146, 768, 1080, 1404, 2200, 2660
BstDEI CTNAG 5 cut(s) 512, 1614, 2000, 2366, 2464
BstDSI CCRYGG 2 cut(s) 475, 2354
BstF5I GGATG 7 cut(s) 10, 657, 973, 1682, 1826, 2329, 2338
BstHHI GCGC 1 cut(s) 2664
BstKTI GATC 8 cut(s) 417, 679, 1597, 1716, 2015, 2351, 2611, 2646
BstMAI GTCTC 4 cut(s) 38, 2125, 2229, 2465
BstMBI GATC 8 cut(s) 414, 676, 1594, 1713, 2012, 2348, 2608, 2643
BstMWI GCNNNNNNNGC 8 cut(s) 326, 1343, 1511, 1534, 2273, 2333, 2342, 2655
BstNI CCWGG 2 cut(s) 635, 1343
BstNSI RCATGY 5 cut(s) 148, 1044, 1058, 1645, 2655
BstSCI CCNGG 3 cut(s) 13, 633, 1341
BstSFI CTRYAG 2 cut(s) 903, 2235
BstSLI GKGCMC 2 cut(s) 934, 1709
BstV1I GCAGC 4 cut(s) 304, 1934, 1990, 2590
BstV2I GAAGAC 2 cut(s) 693, 2051
BstX2I RGATCY 3 cut(s) 1713, 2012, 2348
BstYI RGATCY 3 cut(s) 1713, 2012, 2348
Bsu15I ATCGAT 1 cut(s) 129
BsuI GTATCC 1 cut(s) 1513
BsuRI GGCC 1 cut(s) 1681
BsuTUI ATCGAT 1 cut(s) 129
BtgI CCRYGG 2 cut(s) 475, 2354
BtsCI GGATG 7 cut(s) 10, 657, 973, 1682, 1826, 2329, 2338
BtsI GCAGTG 3 cut(s) 265, 417, 1523
BtsIMutI CAGTG 4 cut(s) 265, 417, 1236, 1523
BveI ACCTGC 1 cut(s) 1139
Cac8I GCNNGC 7 cut(s) 60, 146, 768, 1080, 1404, 2200, 2660
CaiI CAGNNNCTG 1 cut(s) 836
CciI TCATGA 2 cut(s) 117, 445
CfoI GCGC 1 cut(s) 2664
Cfr10I RCCGGY 1 cut(s) 2632
Cfr13I GGNCC 1 cut(s) 2635
ClaI ATCGAT 1 cut(s) 129
CseI GACGC 2 cut(s) 54, 252
Csp6I GTAC 1 cut(s) 536
CspCI CAANNNNNGTGG 2 cut(s) 1192, 1227
CviQI GTAC 1 cut(s) 536
DdeI CTNAG 5 cut(s) 512, 1614, 2000, 2366, 2464
DpnI GATC 8 cut(s) 416, 678, 1596, 1715, 2014, 2350, 2610, 2645
DpnII GATC 8 cut(s) 414, 676, 1594, 1713, 2012, 2348, 2608, 2643
DraI TTTAAA 3 cut(s) 1254, 1672, 2164
DrdI GACNNNNNNGTC 2 cut(s) 1011, 1580
DriI GACNNNNNGTC 1 cut(s) 501
DseDI GACNNNNNNGTC 2 cut(s) 1011, 1580
EaeI YGGCCR 1 cut(s) 1679
Eam1104I CTCTTC 3 cut(s) 907, 1911, 2274
Eam1105I GACNNNNNGTC 1 cut(s) 501
EarI CTCTTC 3 cut(s) 907, 1911, 2274
Eco130I CCWWGG 2 cut(s) 475, 2354
Eco47I GGWCC 1 cut(s) 2635
Eco57I CTGAAG 5 cut(s) 369, 756, 858, 1822, 2234
Eco88I CYCGRG 1 cut(s) 1775
EcoRI GAATTC 1 cut(s) 2446
EcoRII CCWGG 2 cut(s) 633, 1341
EcoT14I CCWWGG 2 cut(s) 475, 2354
EcoT22I ATGCAT 4 cut(s) 1516, 1593, 2338, 2672
ErhI CCWWGG 2 cut(s) 475, 2354
Esp3I CGTCTC 1 cut(s) 38
FalI AAGNNNNNCTT 2 cut(s) 1679, 1711
FaqI GGGAC 2 cut(s) 255, 1017
FauI CCCGC 1 cut(s) 400
FauNDI CATATG 1 cut(s) 2666
FblI GTMKAC 1 cut(s) 235
Fnu4HI GCNGC 5 cut(s) 63, 318, 1948, 1979, 2604
FokI GGATG 6 cut(s) 664, 980, 1689, 1813, 2336, 2345
Fsp4HI GCNGC 5 cut(s) 63, 318, 1948, 1979, 2604
FspBI CTAG 4 cut(s) 1403, 1710, 1986, 2639
FspI TGCGCA 1 cut(s) 2663
GlaI GCGC 1 cut(s) 2663
GluI GCNGC 5 cut(s) 63, 318, 1948, 1979, 2604
GsuI CTGGAG 3 cut(s) 1680, 2472, 2516
HaeIII GGCC 1 cut(s) 1681
HapII CCGG 3 cut(s) 14, 1407, 2633
HgaI GACGC 2 cut(s) 54, 252
HhaI GCGC 1 cut(s) 2664
Hin1I GRCGYC 2 cut(s) 65, 244
Hin6I GCGC 1 cut(s) 2662
HinP1I GCGC 1 cut(s) 2662
HincII GTYRAC 2 cut(s) 1573, 2569
HindII GTYRAC 2 cut(s) 1573, 2569
HindIII AAGCTT 5 cut(s) 768, 1382, 1535, 1922, 2402
HpaI GTTAAC 1 cut(s) 2569
HpaII CCGG 3 cut(s) 14, 1407, 2633
Hpy166II GTNNAC 6 cut(s) 236, 760, 1479, 1573, 1707, 2569
Hpy188I TCNGA 7 cut(s) 600, 694, 702, 1176, 1586, 2209, 2256
Hpy8I GTNNAC 6 cut(s) 236, 760, 1479, 1573, 1707, 2569
HpyAV CCTTC 7 cut(s) 81, 101, 290, 535, 658, 902, 2174
HpyCH4III ACNGT 8 cut(s) 555, 904, 1240, 1392, 1565, 1816, 2113, 2159
HpyCH4IV ACGT 3 cut(s) 232, 1124, 1931
HpyF10VI GCNNNNNNNGC 8 cut(s) 326, 1343, 1511, 1534, 2273, 2333, 2342, 2655
HpyF3I CTNAG 5 cut(s) 512, 1614, 2000, 2366, 2464
HpySE526I ACGT 3 cut(s) 232, 1124, 1931
Hsp92I GRCGYC 2 cut(s) 65, 244
HspAI GCGC 1 cut(s) 2662
KspAI GTTAAC 1 cut(s) 2569
Kzo9I GATC 8 cut(s) 414, 676, 1594, 1713, 2012, 2348, 2608, 2643
LguI GCTCTTC 2 cut(s) 907, 2274
LmnI GCTCC 1 cut(s) 2541
Lsp1109I GCAGC 4 cut(s) 304, 1934, 1990, 2590
LweI GCATC 7 cut(s) 19, 642, 1065, 1276, 2254, 2314, 2323
MaeI CTAG 4 cut(s) 1403, 1710, 1986, 2639
MaeII ACGT 3 cut(s) 232, 1124, 1931
MaeIII GTNAC 5 cut(s) 66, 824, 1036, 1151, 1234
MalI GATC 8 cut(s) 416, 678, 1596, 1715, 2014, 2350, 2610, 2645
MboI GATC 8 cut(s) 414, 676, 1594, 1713, 2012, 2348, 2608, 2643
MfeI CAATTG 2 cut(s) 657, 2048
MflI RGATCY 3 cut(s) 1713, 2012, 2348
MhlI GDGCHC 2 cut(s) 934, 1709
MlsI TGGCCA 1 cut(s) 1681
MluNI TGGCCA 1 cut(s) 1681
MlyI GAGTC 3 cut(s) 23, 683, 928
MmeI TCCRAC 2 cut(s) 1539, 1854
Mox20I TGGCCA 1 cut(s) 1681
Mph1103I ATGCAT 4 cut(s) 1516, 1593, 2338, 2672
MroXI GAANNNNTTC 4 cut(s) 372, 470, 843, 1734
MscI TGGCCA 1 cut(s) 1681
MslI CAYNNNNRTG 1 cut(s) 1434
Msp20I TGGCCA 1 cut(s) 1681
MspI CCGG 3 cut(s) 14, 1407, 2633
MspR9I CCNGG 3 cut(s) 15, 635, 1343
MunI CAATTG 2 cut(s) 657, 2048
Mva1269I GAATGC 4 cut(s) 1516, 1593, 1769, 2506
MvaI CCWGG 2 cut(s) 635, 1343
MwoI GCNNNNNNNGC 8 cut(s) 326, 1343, 1511, 1534, 2273, 2333, 2342, 2655
NciI CCSGG 1 cut(s) 15
NcoI CCATGG 2 cut(s) 475, 2354
NdeI CATATG 1 cut(s) 2666
NdeII GATC 8 cut(s) 414, 676, 1594, 1713, 2012, 2348, 2608, 2643
NheI GCTAGC 1 cut(s) 1402
NlaIV GGNNCC 1 cut(s) 2586
NmeAIII GCCGAG 2 cut(s) 2206, 2561
NmuCI GTSAC 4 cut(s) 66, 1036, 1151, 1234
NsbI TGCGCA 1 cut(s) 2663
NsiI ATGCAT 4 cut(s) 1516, 1593, 2338, 2672
NspI RCATGY 5 cut(s) 148, 1044, 1058, 1645, 2655
PaeI GCATGC 1 cut(s) 148
PaeR7I CTCGAG 1 cut(s) 1775
PagI TCATGA 2 cut(s) 117, 445
PaqCI CACCTGC 1 cut(s) 1139
PciI ACATGT 3 cut(s) 1054, 1641, 2651
PciSI GCTCTTC 2 cut(s) 907, 2274
PctI GAATGC 4 cut(s) 1516, 1593, 1769, 2506
PdmI GAANNNNTTC 4 cut(s) 372, 470, 843, 1734
PflFI GACNNNGTC 1 cut(s) 1580
PkrI GCNGC 5 cut(s) 64, 319, 1949, 1980, 2605
PleI GAGTC 3 cut(s) 23, 683, 927
PpsI GAGTC 3 cut(s) 23, 683, 927
PscI ACATGT 3 cut(s) 1054, 1641, 2651
PshBI ATTAAT 2 cut(s) 882, 1229
PsiI TTATAA 1 cut(s) 1362
Psp1406I AACGTT 1 cut(s) 1931
Psp6I CCWGG 2 cut(s) 633, 1341
PspGI CCWGG 2 cut(s) 633, 1341
PspN4I GGNNCC 1 cut(s) 2586
PspPI GGNCC 1 cut(s) 2635
PsrI GAACNNNNNNTAC 2 cut(s) 213, 245
PstI CTGCAG 1 cut(s) 2239
PstNI CAGNNNCTG 1 cut(s) 836
PsuI RGATCY 3 cut(s) 1713, 2012, 2348
PsyI GACNNNGTC 1 cut(s) 1580
RsaI GTAC 1 cut(s) 537
RsaNI GTAC 1 cut(s) 536
RseI CAYNNNNRTG 1 cut(s) 1434
SapI GCTCTTC 2 cut(s) 907, 2274
SatI GCNGC 5 cut(s) 63, 318, 1948, 1979, 2604
Sau3AI GATC 8 cut(s) 414, 676, 1594, 1713, 2012, 2348, 2608, 2643
Sau96I GGNCC 1 cut(s) 2635
SchI GAGTC 3 cut(s) 23, 683, 928
ScrFI CCNGG 3 cut(s) 15, 635, 1343
SduI GDGCHC 2 cut(s) 934, 1709
SfaNI GCATC 7 cut(s) 19, 642, 1065, 1276, 2254, 2314, 2323
SfcI CTRYAG 2 cut(s) 903, 2235
Sfr274I CTCGAG 1 cut(s) 1775
SinI GGWCC 1 cut(s) 2635
SlaI CTCGAG 1 cut(s) 1775
SmiMI CAYNNNNRTG 1 cut(s) 1434
SmlI CTYRAG 3 cut(s) 297, 1775, 2399
SmoI CTYRAG 3 cut(s) 297, 1775, 2399
SphI GCATGC 1 cut(s) 148
SsiI CCGC 4 cut(s) 62, 407, 588, 1618
SspI AATATT 2 cut(s) 1735, 2311
SspMI CTAG 4 cut(s) 1403, 1710, 1986, 2639
StyD4I CCNGG 3 cut(s) 13, 633, 1341
StyI CCWWGG 2 cut(s) 475, 2354
TaaI ACNGT 8 cut(s) 555, 904, 1240, 1392, 1565, 1816, 2113, 2159
TaiI ACGT 3 cut(s) 235, 1127, 1934
TaqI TCGA 4 cut(s) 129, 1051, 1101, 1776
TauI GCSGC 1 cut(s) 65
TscAI CASTG 4 cut(s) 272, 424, 1243, 1530
TseFI GTSAC 4 cut(s) 66, 1036, 1151, 1234
TseI GCWGC 4 cut(s) 317, 1947, 1978, 2603
Tsp45I GTSAC 4 cut(s) 66, 1036, 1151, 1234
TspGWI ACGGA 2 cut(s) 62, 195
TspRI CASTG 4 cut(s) 272, 424, 1243, 1530
Tth111I GACNNNGTC 1 cut(s) 1580
VneI GTGCAC 1 cut(s) 1705
VpaK11BI GGWCC 1 cut(s) 2635
VspI ATTAAT 2 cut(s) 882, 1229
XapI RAATTY 7 cut(s) 372, 569, 855, 1029, 1091, 1995, 2446
XceI RCATGY 5 cut(s) 148, 1044, 1058, 1645, 2655
XcmI CCANNNNNNNNNTGG 1 cut(s) 1756
XhoI CTCGAG 1 cut(s) 1775
XmiI GTMKAC 1 cut(s) 235
XmnI GAANNNNTTC 4 cut(s) 372, 470, 843, 1734
XspI CTAG 4 cut(s) 1403, 1710, 1986, 2639
Zsp2I ATGCAT 4 cut(s) 1516, 1593, 2338, 2672
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.