Rmu_sc0009960.1_g000001

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009960.1
Physical Location & Seq
Reverse (-)
8247 .. 16032
7786 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009960.1_g000001.1.cds

Sequence Viewer

Length: 5892 bp
atggactttattactaaagttgtctctggaattgtcgtaaagattgttgagactacagttggaccactttatcgccaagtgggttatgttattcactacaaaagcaaccttcaaaatctgaggagtcaagtggacaacttaggttatgccaaagacaggatgcaacacactcttgatgatgaagtcaaaagaaaaggtaaaagagttgaacgtgatgtcgagaactggctcacaaatgtggatcggatcactcaagaggttgtcgtgttcttggaagatgaactccatgcaaagaccaagtgtttccatggattttgtcctaatccaattcttcgatatcggctcagcaggaaatcaacaaaattggtaaagaagattgatcagttcaatgaaaaaagagaatttcccactgttgcctaccatgtccccccagaagatgtatgcagcattcaatcccgagattacctagcttttgaatcaaggctttcaattgtgaaagacatcatggagaaactgagaaatcctgatttcaacaagattggggtgtatggaattggtggtgtgggtaagaccacactcgccaaagaagtctatagacaagctacagaagagaagttatttgatgatgttattatagtactagatgtcaaactgattccagatttggaaggaattcaaaagcaaattcttgagaagttaggtatggaggttgttgatggtcaaagtatagctataagagcgtctcttctatgggataggataaaagacaacagggttctgatcattttagacgatgttccagaaagaattgatttggtgaccatgggaattctgcgtgtgccaccttgtaatctaatgttcacagctaggaatcgaatagttttatgctctgagttgtgtacacaaaaggattttctgcttgatgttttgggagatatagaaacttggagtttgtttgagaaggtggccggtgatattgttaaagaaaaccctataagaacagtagccatagaagttgccaagaggtgtggaggtctgccaattttagtggtcgctgttgcaaatgccttgagaattagtactttacatgagtggaaggatgccttgagacggttaaaaaagtttgacatgaaacaattggcagataaagcactgttaactctagagtggagttacaatcaattagattctgaagagcttaagccattattcctcctttgtggaattatggctttgagtgataataggatatatctcgatgactgcttcaaatatagtatgggattgggtttgttgaaaaaagtggatacaatggaagaagcacaagctgcatttcagtcattgattaaaaagcttcaaaactattgtttgttgctagagcagccagacgatatttacggtacatttgtcagaatgcatgagcttgtccgcaatgttgccaacatgattgcacgtaaagatcaacatgtcctcctaaaagaatatgaagaggtgtttgaagaatggccaaatgaggctttctttaaaaagtgcactatgatcagactccgtttgtctaatatttttcccacacttcctgaagtcccttggaaatgtcaagaactaaaactgtttatcttgggtagtggggatcagtcgctacaaataggttccaactttttcgaagaaatgaaagaactcaaagtgttagattggtccgggtttcctgttccatcacttcctgcatctcttcagttcctaacaaaccttcaaacgttgtgtttagatcggtgcgtgttgggagacatagctctagttggaaaactaagatgtttgaaaattcttagtttgttcaaatccaaacttacacaattgcctgtagaaatagggcaacttaccaatctacaattgttggatttgaccagttgctcaaaacttgtactgattccacctaatgttattgcgagcttgaaaagtcttgaagatttgagaatgggaacaaacagctttaagcaatgggaggatgaaggaatcgtgggtagcaaaagaacaaattcgagcctttcagagctgaagcagttgtctaagctaaccgcattagacatccatattctagatgctagaattcttccatcaggcttgttcttgcacttggaaagatatcatgtattcatcggtgaagagtggaaatggctttcttttgataatagtttcaacacgctaaagctcaagctagcaacaagcaatcaaatggacagaggtctagaaatgttggttaagagatctgagcatttgtacttggatgtgttggaaggtgtcaatgatatatttcatctattaaatagtgatggttatcagcaactgaaacatctccaagtccaaaacaatgctgagattacacatgtcatcaatcacaacgtcttccagaaattacaatctttgacattgatgaatctaccaaagcttgttagtttctcctccaatagcagaacagctgttgcaactacaacgacggatgagcaattgaagactgatggagagtgtaaagaaatcattttggagaatgagatcgggagtcctgtgcaacttttcaagaatggagagactgtgatgccaaacttaacaatcttgattgtacataaatgtgatggtttaagatttttgctatcatcttccatggctaagagtctcgtacaactcaaacatcttgaggtacacaactgtcaaataatggaagagattgtatcaacaagagaatccggtgaagaaatgaataccgatgacatcttttgtaagctgaaccatcttcaactacaacatctaccacaactcacaagattctgcgtaggaaattatattgaatttccgtccttggagatattgcatgtagaagattgtactaaactggagactttcatctttgatcatgctatgatcaaaagtgaagaaactgattcaaaggataatcttgagactcctggaccatattttttgtttcatgacaaggttggatttccaaggttggagagattggtcatttatgcccttcctaagttgataacaatatggcacaaccaactttctcaggactctttttgcagactcagaaaaattgacgtacaaagatgccacaatctaataaatatctttgctgctagtattatgaaaagattgaatgctctggacaccttacagatacgtaattgcaagtcaatacaagtggtatttgaacttggaggaatcaatgttgagagacatgatggcccatcaactactcagatgaggatgtcttattgtcaaaatctcgatttaatagaaatagattcatgtgagagtttaaaaaatatccttccagtatcagtggccaagggtcttgagcaactaaggaagctgagtgtgactaattgtgatggagtggaggcaattgttgcaaaggaaggacaagaaacaacgcctaactttgtgttctcgaaagcaacgtctgtgacatttcatagtctgccccaaattaagtgcttctataatgggaggcacacttccaagtggttgttactcaaagaattatgggtgaatgaatgcccaaatgtggatatatttgcctcggaattttcaagatgtcaagaaaaccttgggtctacacagccttttttcttaattgagaaggattcattccccaatttggaacatttgactttgggcggcacgaagttggagatttgcgacggtccactaccagcaaaggtgtttagcaagctgaaatatcttaacattgcttctccacgcttcaagtcatcatatgcttttcttcgaaaattgcacaaccttgaaaaacttattgtgcatgattcccttttggaggagatatttgtcgatcaaggaaatggtagtgggaaaatacatgcagttggaacccatctcccacatttaagatctttgatgcttaaagaactttcgatgttgatgcatctggggaaggagaactcccaaccaattattccaaatttggaaattctagaggtgtcactctgtgggaaattaaagaatctaagctccccagcgatatcctttcagaagctcacaactctaaaagtaattggttgtcaacggctggaatacttgataactagctcgattgcccagagtctaaagcaactcacacgtttggaagttaaggattgtgaaagactggtgcaaatagtgggaagcagcagcgaagatgaggcgggaaatgagattgcttttaacaggttggagcatttggaactttcaggactgcccagtttgcaatgttttttctcgggtaccatgctttctcatcaatttacaatttgcgatgaaattgaagagagtggtgattcgaaggagaatgttgatagtgctgtacaatacattctatttgacaaaaaggtgggattacctagattggaaacactgatcgtccatgacctacataagttgatgagaatatggcacgaacaacttgctccagactccttttgtagactcaaaacagttgatgctcagagatgccagagtctaataaatatctttgaggctagtattctgggaagattgaatgctctcgacactttgaagctaacgcagtgccactcgctacgactggtattcgaacacggaggaatcaatgctgaagaaggtgatgatacatcaatcactccgtccgaattgcctgaatactgtcagaatttggcttcagtggaaatagattcctgtgagagtttgaagaatatctttccagcctcagtaaccagaggtcttcagcagctgaggaagctgagtgtagagaattgcgttagagtggaggaaattgttgcgatggaaggactgggaatgacaacacctgagtttgtgttcccaaacgcaacatctgtaatatttcgaaatctgccacgactttcaagtttttatccagggatgcacgcttccgtgtggcctcaactcaaggagttgagagtgatgtcctgtgacaatgtggagatttttgccctggaattttcaagatttcaggctaaacctgagttgggccttgtgggtacagctatcaagcaacctttgtttctaatcgagaagggttcattctccaacttggaaatattgtacttttactcaatggtcggtacaatgaagaattggtggagtctactcccagcagagttcttcagcaaactaaaatctcttgggtctcaatctggtgtgtttcaatctggtttccttcagtatttaccacatcttgaagcacttgtgctttatggttttgagaaagaagtatttgtccatgaagcaaatagtagtgggcaaattcaggctgttgggacactactcccgcgcttaaaaagtttgtgggtattaaatatgccggagctgatgcatctagggaaggagaactcacaacctgttcttccaaatttggagtctctaagattggagctttgtgggaaattaaagaacctaaggtcatccgcaatatcctttcaaaatctaaaagctttgaaagtcgtgaaatgccacggactggaatatttgacaacttactcgatagcccaaagcctaacgcaactcacacatatggaagttaaggattgtcaaggactgacagagatagtggcatataatagtaaccaagatgatgatgcagtaaatgagattgcattcatgagattacaacgtttggaactttctggtctaccaagtctccgaagattttgctccggaaattgttcagttaaaatcccatccttggatacattggtcgtgaccgactgcctggtcaagttgagcatttctcctgattgggtactcctcactgattttaacccagaaaggtttcttcagaattttaataatcttgataaccttgtgctgcatggtgatcacaaagagatttttccatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1963

Amino Acids

223.05

Weight (kDa)

6.05

Isoelectric Point (pI)

40.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 5765
Acc65I GGTACC 1 cut(s) 4280
AccB1I GGYRCC 1 cut(s) 4280
AccB7I CCANNNNNTGG 1 cut(s) 5512
AccI GTMKAC 4 cut(s) 3614, 4480, 5140, 5683
AccII CGCG 1 cut(s) 5326
AccIII TCCGGA 1 cut(s) 5708
AciI CCGC 6 cut(s) 1429, 2073, 3678, 4202, 5324, 5460
AclI AACGTT 2 cut(s) 1754, 5665
AclWI GGATC 3 cut(s) 249, 254, 1638
AcoI YGGCCR 3 cut(s) 966, 1505, 3342
AdeI CACNNNGTG 1 cut(s) 4007
AfiI CCNNNNNNNGG 8 cut(s) 156, 1110, 3565, 3658, 3835, 5021, 5512, 5737
AflII CTTAAG 1 cut(s) 1199
AflIII ACRYGT 3 cut(s) 1465, 2380, 4136
AjnI CCWGG 4 cut(s) 2956, 4909, 4986, 5763
AjuI GAANNNNNNNTTGG 2 cut(s) 3957, 3989
AleI CACNNNNGTG 1 cut(s) 236
Alw21I GWGCWC 1 cut(s) 1535
Alw44I GTGCAC 1 cut(s) 1531
AlwI GGATC 3 cut(s) 249, 254, 1638
AlwNI CAGNNNCTG 2 cut(s) 2341, 4765
Ama87I CYCGRG 2 cut(s) 456, 4276
Aor13HI TCCGGA 1 cut(s) 5708
AoxI GGCC 6 cut(s) 966, 1505, 3241, 3342, 4931, 5023
ApaLI GTGCAC 1 cut(s) 1531
ApeKI GCWGC 8 cut(s) 444, 1328, 1381, 3131, 4185, 4188, 4762, 5860
ArsI GACNNNNNNTTYG 4 cut(s) 3443, 3475, 5396, 5428
Asp700I GAANNNNTTC 4 cut(s) 672, 2032, 5716, 5823
Asp718I GGTACC 1 cut(s) 4280
AspLEI GCGC 1 cut(s) 5328
AspS9I GGNCC 6 cut(s) 62, 1695, 2960, 3242, 3704, 5023
AsuC2I CCSGG 1 cut(s) 1699
AsuHPI GGTGA 8 cut(s) 829, 983, 2168, 2753, 3559, 4343, 4649, 5879
AsuII TTCGAA 5 cut(s) 1662, 3787, 4337, 4608, 4879
AsuNHI GCTAGC 1 cut(s) 2212
AvaI CYCGRG 2 cut(s) 456, 4276
AvaII GGWCC 4 cut(s) 62, 1695, 2960, 3704
AxyI CCTNAGG 1 cut(s) 5450
BaeGI GKGCMC 1 cut(s) 1535
BaeI ACNNNNGTAYC 4 cut(s) 1392, 1425, 5733, 5766
BalI TGGCCA 2 cut(s) 1507, 3344
BanI GGYRCC 1 cut(s) 4280
BbsI GAAGAC 3 cut(s) 2392, 2513, 4748
Bbv12I GWGCWC 1 cut(s) 1535
BbvCI CCTCAGC 1 cut(s) 4766
BbvI GCAGC 8 cut(s) 456, 1315, 1393, 3118, 4197, 4200, 4774, 5847
BceAI ACGGC 1 cut(s) 4100
BcgI CGANNNNNNTGC 6 cut(s) 3922, 3956, 4442, 4476, 5685, 5719
BciT130I CCWGG 4 cut(s) 2958, 4911, 4988, 5765
BciVI GTATCC 2 cut(s) 1300, 5734
BclI TGATCA 6 cut(s) 379, 780, 1539, 2902, 2913, 5869
BcnI CCSGG 1 cut(s) 1699
BfmI CTRYAG 4 cut(s) 54, 592, 603, 1857
BfrI CTTAAG 1 cut(s) 1199
BfuI GTATCC 2 cut(s) 1300, 5734
BglII AGATCT 2 cut(s) 2261, 3908
BisI GCNGC 9 cut(s) 445, 1329, 1382, 3132, 3679, 4186, 4189, 4763, 5861
BlpI GCTNAGC 1 cut(s) 344
BlsI GCNGC 9 cut(s) 446, 1330, 1383, 3133, 3680, 4187, 4190, 4764, 5862
BmcAI AGTACT 2 cut(s) 639, 1081
Bme1390I CCNGG 5 cut(s) 1699, 2958, 4911, 4988, 5765
Bme18I GGWCC 4 cut(s) 62, 1695, 2960, 3704
BmeT110I CYCGRG 2 cut(s) 456, 4276
BmgT120I GGNCC 6 cut(s) 62, 1695, 2960, 3242, 3704, 5023
BmiI GGNNCC 3 cut(s) 1651, 3889, 4282
BmrFI CCNGG 5 cut(s) 1699, 2958, 4911, 4988, 5765
BmrI ACTGGG 2 cut(s) 4251, 4835
BmtI GCTAGC 1 cut(s) 2216
BmuI ACTGGG 2 cut(s) 4251, 4835
BoxI GACNNNNGTC 1 cut(s) 2238
BpiI GAAGAC 3 cut(s) 2392, 2513, 4748
BplI GAGNNNNNCTC 2 cut(s) 5767, 5799
BpmI CTGGAG 2 cut(s) 2906, 4449
Bpu10I CCTNAGC 1 cut(s) 4766
Bpu1102I GCTNAGC 1 cut(s) 344
Bpu14I TTCGAA 5 cut(s) 1662, 3787, 4337, 4608, 4879
BpuEI CTTGAG 9 cut(s) 237, 710, 1090, 1126, 2192, 2708, 2969, 3374, 4925
BpuMI CCSGG 1 cut(s) 1699
BsaAI YACGTR 2 cut(s) 1454, 3179
BsaBI GATNNNNATC 1 cut(s) 2331
BsaI GGTCTC 1 cut(s) 5187
BsaWI WCCGGW 2 cut(s) 2738, 5708
BsaXI ACNNNNNCTCC 6 cut(s) 1455, 1485, 2571, 2601, 5676, 5706
Bsc4I CCNNNNNNNGG 8 cut(s) 156, 1110, 3565, 3658, 3835, 5021, 5512, 5737
Bse118I RCCGGY 1 cut(s) 968
Bse1I ACTGG 9 cut(s) 230, 1902, 2889, 3332, 4170, 4257, 4605, 4830, 5517
Bse21I CCTNAGG 1 cut(s) 5450
Bse3DI GCAATG 4 cut(s) 1438, 2000, 3747, 4271
Bse8I GATNNNNATC 1 cut(s) 2331
BseAI TCCGGA 1 cut(s) 5708
BseBI CCWGG 4 cut(s) 2958, 4911, 4988, 5765
BseJI GATNNNNATC 1 cut(s) 2331
BseLI CCNNNNNNNGG 8 cut(s) 156, 1110, 3565, 3658, 3835, 5021, 5512, 5737
BseMI GCAATG 4 cut(s) 1438, 2000, 3747, 4271
BseNI ACTGG 9 cut(s) 230, 1902, 2889, 3332, 4170, 4257, 4605, 4830, 5517
BseRI GAGGAG 4 cut(s) 136, 2446, 3851, 5789
BseSI GKGCMC 1 cut(s) 1535
BseXI GCAGC 8 cut(s) 456, 1315, 1393, 3118, 4197, 4200, 4774, 5847
BseYI CCCAGC 2 cut(s) 4033, 5146
Bsh1236I CGCG 1 cut(s) 5326
BshFI GGCC 6 cut(s) 968, 1507, 3243, 3344, 4933, 5025
BshNI GGYRCC 1 cut(s) 4280
BsiHKAI GWGCWC 1 cut(s) 1535
BsiHKCI CYCGRG 2 cut(s) 456, 4276
BsiSI CCGG 5 cut(s) 969, 1698, 2739, 5357, 5709
BslFI GGGAC 3 cut(s) 410, 1568, 5326
BslI CCNNNNNNNGG 8 cut(s) 156, 1110, 3565, 3658, 3835, 5021, 5512, 5737
BsmBI CGTCTC 2 cut(s) 747, 1102
BsmFI GGGAC 3 cut(s) 410, 1568, 5326
BsmI GAATGC 6 cut(s) 447, 1419, 3160, 3560, 4561, 5648
BsnI GGCC 6 cut(s) 968, 1507, 3243, 3344, 4933, 5025
Bso31I GGTCTC 1 cut(s) 5187
BsoBI CYCGRG 2 cut(s) 456, 4276
Bsp119I TTCGAA 5 cut(s) 1662, 3787, 4337, 4608, 4879
Bsp1286I GDGCHC 1 cut(s) 1535
Bsp13I TCCGGA 1 cut(s) 5708
Bsp1407I TGTACA 3 cut(s) 899, 2614, 4360
Bsp1720I GCTNAGC 1 cut(s) 344
Bsp19I CCATGG 3 cut(s) 307, 822, 2655
BspACI CCGC 6 cut(s) 1429, 2073, 3678, 4202, 5324, 5460
BspANI GGCC 6 cut(s) 968, 1507, 3243, 3344, 4933, 5025
BspEI TCCGGA 1 cut(s) 5708
BspFNI CGCG 1 cut(s) 5326
BspHI TCATGA 2 cut(s) 2977, 5652
BspLI GGNNCC 3 cut(s) 1651, 3889, 4282
BspOI GCTAGC 1 cut(s) 2216
BspPI GGATC 3 cut(s) 249, 254, 1638
BspQI GCTCTTC 1 cut(s) 1188
BspT104I TTCGAA 5 cut(s) 1662, 3787, 4337, 4608, 4879
BspT107I GGYRCC 1 cut(s) 4280
BspTI CTTAAG 1 cut(s) 1199
BspTNI GGTCTC 1 cut(s) 5187
BsrDI GCAATG 4 cut(s) 1438, 2000, 3747, 4271
BsrFI RCCGGY 1 cut(s) 968
BsrGI TGTACA 3 cut(s) 899, 2614, 4360
BsrI ACTGG 9 cut(s) 230, 1902, 2889, 3332, 4170, 4257, 4605, 4830, 5517
BssAI RCCGGY 1 cut(s) 968
BssT1I CCWWGG 9 cut(s) 307, 822, 1586, 2655, 2850, 2996, 3345, 3607, 5736
Bst2UI CCWGG 4 cut(s) 2958, 4911, 4988, 5765
Bst6I CTCTTC 8 cut(s) 603, 750, 1188, 1482, 1734, 2154, 2709, 4317
BstAFI CTTAAG 1 cut(s) 1199
BstAPI GCANNNNNTGC 2 cut(s) 1328, 3407
BstAUI TGTACA 3 cut(s) 899, 2614, 4360
BstBAI YACGTR 2 cut(s) 1454, 3179
BstBI TTCGAA 5 cut(s) 1662, 3787, 4337, 4608, 4879
BstC8I GCNNGC 4 cut(s) 1945, 2214, 3731, 4920
BstDSI CCRYGG 4 cut(s) 307, 822, 2655, 5506
BstEII GGTNACC 1 cut(s) 817
BstENI CCTNNNNNAGG 1 cut(s) 3833
BstFNI CGCG 1 cut(s) 5326
BstHHI GCGC 1 cut(s) 5328
BstMWI GCNNNNNNNGC 7 cut(s) 737, 1148, 1328, 1381, 3407, 4261, 4771
BstNI CCWGG 4 cut(s) 2958, 4911, 4988, 5765
BstNSI RCATGY 4 cut(s) 1469, 2384, 2867, 3881
BstPAI GACNNNNGTC 1 cut(s) 2238
BstPI GGTNACC 1 cut(s) 817
BstSCI CCNGG 5 cut(s) 1697, 2956, 4909, 4986, 5763
BstSFI CTRYAG 4 cut(s) 54, 592, 603, 1857
BstSLI GKGCMC 1 cut(s) 1535
BstSNI TACGTA 1 cut(s) 3179
BstUI CGCG 1 cut(s) 5326
BstV1I GCAGC 8 cut(s) 456, 1315, 1393, 3118, 4197, 4200, 4774, 5847
BstV2I GAAGAC 3 cut(s) 2392, 2513, 4748
BstX2I RGATCY 2 cut(s) 2261, 3908
BstYI RGATCY 2 cut(s) 2261, 3908
Bsu36I CCTNAGG 1 cut(s) 5450
BsuI GTATCC 2 cut(s) 1300, 5734
BsuRI GGCC 6 cut(s) 968, 1507, 3243, 3344, 4933, 5025
BtgI CCRYGG 4 cut(s) 307, 822, 2655, 5506
BtgZI GCGATG 2 cut(s) 4326, 4829
BtsI GCAGTG 1 cut(s) 4589
BtsIMutI CAGTG 7 cut(s) 408, 1151, 3345, 4409, 4589, 4701, 5802
Cac8I GCNNGC 4 cut(s) 1945, 2214, 3731, 4920
CaiI CAGNNNCTG 2 cut(s) 2341, 4765
CciI TCATGA 2 cut(s) 2977, 5652
CfoI GCGC 1 cut(s) 5328
Cfr10I RCCGGY 1 cut(s) 968
Cfr13I GGNCC 6 cut(s) 62, 1695, 2960, 3242, 3704, 5023
CseI GACGC 1 cut(s) 729
CspCI CAANNNNNGTGG 6 cut(s) 1009, 1029, 1044, 1064, 3180, 3215
DraI TTTAAA 2 cut(s) 1525, 3318
DraIII CACNNNGTG 1 cut(s) 4007
DrdI GACNNNNNNGTC 1 cut(s) 5765
DseDI GACNNNNNNGTC 1 cut(s) 5765
EaeI YGGCCR 3 cut(s) 966, 1505, 3342
Eam1104I CTCTTC 8 cut(s) 603, 750, 1188, 1482, 1734, 2154, 2709, 4317
EarI CTCTTC 8 cut(s) 603, 750, 1188, 1482, 1734, 2154, 2709, 4317
Eco105I TACGTA 1 cut(s) 3179
Eco130I CCWWGG 9 cut(s) 307, 822, 1586, 2655, 2850, 2996, 3345, 3607, 5736
Eco31I GGTCTC 1 cut(s) 5187
Eco32I GATATC 3 cut(s) 338, 2141, 4041
Eco47I GGWCC 4 cut(s) 62, 1695, 2960, 3704
Eco81I CCTNAGG 1 cut(s) 5450
Eco88I CYCGRG 2 cut(s) 456, 4276
Eco91I GGTNACC 1 cut(s) 817
EcoNI CCTNNNNNAGG 1 cut(s) 3833
EcoO65I GGTNACC 1 cut(s) 817
EcoRI GAATTC 3 cut(s) 672, 828, 2103
EcoRII CCWGG 4 cut(s) 2956, 4909, 4986, 5763
EcoRV GATATC 3 cut(s) 338, 2141, 4041
EcoT14I CCWWGG 9 cut(s) 307, 822, 1586, 2655, 2850, 2996, 3345, 3607, 5736
EcoT22I ATGCAT 3 cut(s) 1419, 3945, 5370
ErhI CCWWGG 9 cut(s) 307, 822, 1586, 2655, 2850, 2996, 3345, 3607, 5736
Esp3I CGTCTC 2 cut(s) 747, 1102
FalI AAGNNNNNCTT 6 cut(s) 1088, 1120, 3591, 3623, 4715, 4747
FaqI GGGAC 3 cut(s) 410, 1568, 5326
FauI CCCGC 2 cut(s) 4195, 5331
FauNDI CATATG 2 cut(s) 3775, 5565
FbaI TGATCA 6 cut(s) 379, 780, 1539, 2902, 2913, 5869
FblI GTMKAC 4 cut(s) 3614, 4480, 5140, 5683
Fnu4HI GCNGC 9 cut(s) 445, 1329, 1382, 3132, 3679, 4186, 4189, 4763, 5861
Fsp4HI GCNGC 9 cut(s) 445, 1329, 1382, 3132, 3679, 4186, 4189, 4763, 5861
GlaI GCGC 1 cut(s) 5327
GluI GCNGC 9 cut(s) 445, 1329, 1382, 3132, 3679, 4186, 4189, 4763, 5861
GsaI CCCAGC 2 cut(s) 4037, 5150
GsuI CTGGAG 2 cut(s) 2906, 4449
HaeIII GGCC 6 cut(s) 968, 1507, 3243, 3344, 4933, 5025
HapII CCGG 5 cut(s) 969, 1698, 2739, 5357, 5709
HgaI GACGC 1 cut(s) 729
HhaI GCGC 1 cut(s) 5328
Hin6I GCGC 1 cut(s) 5326
HinP1I GCGC 1 cut(s) 5326
HincII GTYRAC 2 cut(s) 1158, 4082
HindII GTYRAC 2 cut(s) 1158, 4082
HindIII AAGCTT 3 cut(s) 1352, 2441, 5484
HpaI GTTAAC 1 cut(s) 1158
HpaII CCGG 5 cut(s) 969, 1698, 2739, 5357, 5709
HphI GGTGA 8 cut(s) 829, 983, 2168, 2753, 3559, 4343, 4649, 5879
Hpy99I CGWCG 2 cut(s) 2494, 3704
HpyCH4IV ACGT 9 cut(s) 211, 1453, 1754, 2397, 3096, 3178, 3458, 4138, 5665
HpyF10VI GCNNNNNNNGC 7 cut(s) 737, 1148, 1328, 1381, 3407, 4261, 4771
HpySE526I ACGT 9 cut(s) 211, 1453, 1754, 2397, 3096, 3178, 3458, 4138, 5665
HspAI GCGC 1 cut(s) 5326
Kpn2I TCCGGA 1 cut(s) 5708
KpnI GGTACC 1 cut(s) 4284
Ksp22I TGATCA 6 cut(s) 379, 780, 1539, 2902, 2913, 5869
KspAI GTTAAC 1 cut(s) 1158
LguI GCTCTTC 1 cut(s) 1188
LmnI GCTCC 6 cut(s) 4034, 4231, 4468, 5359, 5425, 5711
Lsp1109I GCAGC 8 cut(s) 456, 1315, 1393, 3118, 4197, 4200, 4774, 5847
MaeII ACGT 9 cut(s) 211, 1453, 1754, 2397, 3096, 3178, 3458, 4138, 5665
MfeI CAATTG 6 cut(s) 489, 1136, 1850, 1886, 2501, 3402
MflI RGATCY 2 cut(s) 2261, 3908
MhlI GDGCHC 1 cut(s) 1535
MlsI TGGCCA 2 cut(s) 1507, 3344
MluNI TGGCCA 2 cut(s) 1507, 3344
Mox20I TGGCCA 2 cut(s) 1507, 3344
Mph1103I ATGCAT 3 cut(s) 1419, 3945, 5370
MroI TCCGGA 1 cut(s) 5708
MroXI GAANNNNTTC 4 cut(s) 672, 2032, 5716, 5823
MscI TGGCCA 2 cut(s) 1507, 3344
MslI CAYNNNNRTG 3 cut(s) 236, 2622, 5564
Msp20I TGGCCA 2 cut(s) 1507, 3344
MspA1I CMGCKG 2 cut(s) 2474, 4765
MspCI CTTAAG 1 cut(s) 1199
MspI CCGG 5 cut(s) 969, 1698, 2739, 5357, 5709
MspR9I CCNGG 5 cut(s) 1699, 2958, 4911, 4988, 5765
MunI CAATTG 6 cut(s) 489, 1136, 1850, 1886, 2501, 3402
Mva1269I GAATGC 6 cut(s) 447, 1419, 3160, 3560, 4561, 5648
MvaI CCWGG 4 cut(s) 2958, 4911, 4988, 5765
MvnI CGCG 1 cut(s) 5326
MwoI GCNNNNNNNGC 7 cut(s) 737, 1148, 1328, 1381, 3407, 4261, 4771
NciI CCSGG 1 cut(s) 1699
NcoI CCATGG 3 cut(s) 307, 822, 2655
NdeI CATATG 2 cut(s) 3775, 5565
NheI GCTAGC 1 cut(s) 2212
NlaIV GGNNCC 3 cut(s) 1651, 3889, 4282
NmuCI GTSAC 6 cut(s) 817, 3376, 3463, 3999, 4964, 5752
NsiI ATGCAT 3 cut(s) 1419, 3945, 5370
NspI RCATGY 4 cut(s) 1469, 2384, 2867, 3881
NspV TTCGAA 5 cut(s) 1662, 3787, 4337, 4608, 4879
OliI CACNNNNGTG 1 cut(s) 236
PagI TCATGA 2 cut(s) 2977, 5652
PciI ACATGT 2 cut(s) 1465, 2380
PciSI GCTCTTC 1 cut(s) 1188
PcsI WCGNNNNNNNCGW 1 cut(s) 3455
PctI GAATGC 6 cut(s) 447, 1419, 3160, 3560, 4561, 5648
PdmI GAANNNNTTC 4 cut(s) 672, 2032, 5716, 5823
PflMI CCANNNNNTGG 1 cut(s) 5512
PfoI TCCNGGA 1 cut(s) 2956
PkrI GCNGC 9 cut(s) 446, 1330, 1383, 3133, 3680, 4187, 4190, 4764, 5862
Ppu21I YACGTR 2 cut(s) 1454, 3179
PscI ACATGT 2 cut(s) 1465, 2380
PshAI GACNNNNGTC 1 cut(s) 2238
Psp1406I AACGTT 2 cut(s) 1754, 5665
Psp6I CCWGG 4 cut(s) 2956, 4909, 4986, 5763
PspEI GGTNACC 1 cut(s) 817
PspFI CCCAGC 2 cut(s) 4033, 5146
PspGI CCWGG 4 cut(s) 2956, 4909, 4986, 5763
PspN4I GGNNCC 3 cut(s) 1651, 3889, 4282
PspPI GGNCC 6 cut(s) 62, 1695, 2960, 3242, 3704, 5023
PstNI CAGNNNCTG 2 cut(s) 2341, 4765
PsuI RGATCY 2 cut(s) 2261, 3908
PvuII CAGCTG 2 cut(s) 2474, 4765
RseI CAYNNNNRTG 3 cut(s) 236, 2622, 5564
SapI GCTCTTC 1 cut(s) 1188
SatI GCNGC 9 cut(s) 445, 1329, 1382, 3132, 3679, 4186, 4189, 4763, 5861
Sau96I GGNCC 6 cut(s) 62, 1695, 2960, 3242, 3704, 5023
ScaI AGTACT 2 cut(s) 639, 1081
ScrFI CCNGG 5 cut(s) 1699, 2958, 4911, 4988, 5765
SduI GDGCHC 1 cut(s) 1535
SfcI CTRYAG 4 cut(s) 54, 592, 603, 1857
SfuI TTCGAA 5 cut(s) 1662, 3787, 4337, 4608, 4879
SinI GGWCC 4 cut(s) 62, 1695, 2960, 3704
SmiMI CAYNNNNRTG 3 cut(s) 236, 2622, 5564
SnaBI TACGTA 1 cut(s) 3179
SsiI CCGC 6 cut(s) 1429, 2073, 3678, 4202, 5324, 5460
SspI AATATT 4 cut(s) 1561, 4875, 5094, 5519
StyD4I CCNGG 5 cut(s) 1697, 2956, 4909, 4986, 5763
StyI CCWWGG 9 cut(s) 307, 822, 1586, 2655, 2850, 2996, 3345, 3607, 5736
TaiI ACGT 9 cut(s) 214, 1456, 1757, 2400, 3099, 3181, 3461, 4141, 5668
TaqII GACCGA 1 cut(s) 5771
TatI WGTACW 9 cut(s) 637, 899, 1079, 1918, 2274, 2614, 2876, 4360, 5097
TauI GCSGC 1 cut(s) 3681
TscAI CASTG 7 cut(s) 415, 1158, 3345, 4416, 4589, 4701, 5809
TseFI GTSAC 6 cut(s) 817, 3376, 3463, 3999, 4964, 5752
TseI GCWGC 8 cut(s) 444, 1328, 1381, 3131, 4185, 4188, 4762, 5860
Tsp45I GTSAC 6 cut(s) 817, 3376, 3463, 3999, 4964, 5752
TspGWI ACGGA 7 cut(s) 1538, 2507, 2835, 4629, 4647, 4915, 5523
TspRI CASTG 7 cut(s) 415, 1158, 3345, 4416, 4589, 4701, 5809
Van91I CCANNNNNTGG 1 cut(s) 5512
Vha464I CTTAAG 1 cut(s) 1199
VneI GTGCAC 1 cut(s) 1531
VpaK11BI GGWCC 4 cut(s) 62, 1695, 2960, 3704
XagI CCTNNNNNAGG 1 cut(s) 3833
XbaI TCTAGA 4 cut(s) 1162, 2092, 2242, 3991
XceI RCATGY 4 cut(s) 1469, 2384, 2867, 3881
XmiI GTMKAC 4 cut(s) 3614, 4480, 5140, 5683
XmnI GAANNNNTTC 4 cut(s) 672, 2032, 5716, 5823
ZrmI AGTACT 2 cut(s) 639, 1081
Zsp2I ATGCAT 3 cut(s) 1419, 3945, 5370
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.