Rmu_sc0000166.1_g000036

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000166.1
OG0000042
Physical Location & Seq
Forward (+)
191500 .. 197796
6297 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000166.1_g000036.1.cds

Sequence Viewer

Length: 5118 bp
atggattgtctttgtgcaattggtaacggggttgttggaaaaatagccgagtacacggttgaaccctttggacgcctagtgagacgccaagtgggttatctaatccactacaacaagaatcttcaaactctaatgacccaagtgaagattttgagcgtcgccagagatagagtacagcaacaggttgatggagctgatagaagaggtgagaaaatccataatgatgtccaaaaatggctcgaagaagtgggtcagatcataaaagacacagaagaattcttgaaggaaaaatgccaagcaactggagagccgaacgaagtcttaaaggatgcaagccaagcaaatgaagagccaagcgaagtcttgaaggatgaacatcaggcaaagatgaagcgtccccatcaactttgtcctaacccgatacttcgttatcaactaagcaagaagtcaacaaagttggtggaggccgtggatgaactctataaaagaaaagacttctccattgtttcacacagtgttcgcccacaagaggtatgtgtcatacctactgaagactatgaggcatttgattcaaggatttcaactttgagtaaaatcatggatgaattgagaagtcccagtgccgacatcattctagtgtatggtattgggggtgtcggtaaaaccacactagtggaagaagttttcaggcaagttacgaaagataagttgtttgatgatgcagtcatggtacgagatgtgaaaaatccaaacttggaagcaattcaaaaagaaattgctgaaaagttaagtcttgaagttttgtcaaaccagactatctccgtaagagccaataaaatatgtgaaagaataaaaaacaagaagactcttgtgattttggatgatgtctgggaacaaattaacttgaaaactctcgggcttccccacatacctacttgtaaaatactgctgacctctagaactggaaaggtattaactgctgactacattaagcagagggagtttctgctcggcattttaggccaagatgaaacttggcttttatttgagaagacagcaggggatgttactaaagattccgctataaaaaccttagcaactcaagtagcccaaagatgtggaggtttgcctcttttgattatcgcagtagcaagagctttagaacatagttctttacctatatgggaatatgccctaacaagtcttcacaggtttgatgagaaagaagacttcacggaacaagcttacttgggtcttgaatggagttacactcgattgaatgagcagcttaagccattgttcttgttgtgtggtactactatacaggggaactctatttctttgacgaacttattgaaatatagtatgggcttgggtttttttaaaggtctttcagttgaaaatgctcgaaatgcattgtacacacaagttgataaacttaagagttcttgtctattgctagacggagatgataatacatgtgtcagaatgcatgatcttttacatgatgttgctatccggattgcgactagagatcaagacgtcctagtacaaaatggagttcatcagttggaagaatggccagatcaagaatattttaaaaggtgcagtaagatcttctggtcctgttgcattatccccagtcttcctgacgtacaatggaaatgtcctgagctagaaatgttcagtttgcatggtaatagtgaaaaaaatgatcaacattcgaaaattccaagcaatttttttgaagaaatgccaaaactcaaggtgttggatatttgcaatctgcctctcatgtcactacctccatctcttgaattgctaaaaaccaatcttcaaacattgtgtttagatcgatgcacgttggaagacatagctcgagttggagagctaagcaacttggaaactcttagctttgctaactccaaggtcaaagagttgccgaaagaaatagcgaaattgactcatctgcggttgttggacttgtcggattgccatgagcttgaagtgatttcacctaatgtcatatcaagtttgacaaggatcgaagacttgagaatgaaaaacagtttttcaaaatgggaggctgagagagacatcaacgaaagaaagaatgctagtcttttggagctgaagcagttatctcgactaactgcattagaaatatatattccagatgttgatattcttccaccaaacttgttctccaatatgctcaaaagatatcatatatatattggtggtgtgtggaaaagcaggtatacgtggcagaaaactatggctgaaacgaccctcaatacactaaagctcgagctcactcccagcaatcaatcggatcaaggtctaagaaggctgatgatgaaatctgaagatttggccttggatgtgaaggaaggtattaataatagtttgtatcaattagacaacgaaggttttctgcacctgaaacgcctcctactccaaaacaatgttgatctttcatatatcaatgacaagaagctcaaacatcttgagatacgcaactgcaacagcatggaagaggtagtatcatcaacaacagattacaatgaagaaaatatgaatgacatgttctgtaagcttgaaactctggaactggaacgacttccatgcctcggtagaatttgcacaggtactcgtattgaatttccgtccttgaagaagttggttataaggtattgtaaaaaattgaaggcattcatctgtgaccctatgagtgataaaagtactagaaactgcaaagaaattgaagagaaggagtcagaggagagcccaagtgttgaacatgagagtgttgcagaacgctgcctttttaacgacaaggtaagatttcctagcttggaggaattgaaaatcgaatctttagacgagttgcagacaatatggcacaataaccaacttgctgatcaagactctttttgccgactcaaacaagttgacgtttgttggtgcaagagtctgataagtatatttccgcctagtatcatggggagattgaatgctctggaaagattagagatacaactttgcggctcgctaaaagtggtatttgacgtcggaggaattaatgttgaagagacacgtgtcaacacatcatccccttatgttcgtatgttctgtaagcttgaaactctggaactgcgagaccttgcatgcctccgcagagtttgcacaggtactcctattgaatttccgtccttgaagaggttggatataaggaattgtgaaaaactgaaggcattcatctgtgaccctatgagtgataaaagtactagaaactgcaaagaaattgaagaaaaggagtcagaggagagcccaagtgttgaacatgagagtgttgcagaacactgcctttttaacgacaaggtaagatttcctagcttggaggaattgagaatcgaatttttagacgagttgcagacaatatggcacaataaccaacttgctgatcaagactctttttgccgactcaaacaagttgacgtttgttggtgcaagactctgataagtatatttccgcctagtatcatggggagattgaatgctctggaaagattagacatacgaggttgcggctcactaaaagtggtatttgaagtcggaggaattaatgttgaagagacacgtgtcaacacatcatccccttatgttcgtatgttctgtaagcttgaaactctggaactggaacgacttccatgcctccgcagagtttgcacaggtactcgtattgaatttccgtccttgaagacattggccatagagcattgtagacaattgaaggcattcatctgtgaccctatgagtgataaaagtactagaaactgcaaagaaattgaagaaaaggagtcagaggagagcccaagtgttgaacatgagagtgttgcagaacgctgcctttttaacgacaaggtaagatttcctagcttggaggtattgataatttgttcattagacgagttgcggacaatatggcacaataaccaacttgctgatcaagactgtttttgccgactcaaaattgttgcagttagatattgcaatggtctgatacgtatatttccgcctagtatcatggggagattgaatgctctggaaagattagacatacgaggttgcggctcactaaaagtggtatttgaagtcggaggaattaatgttgaagagacacgtgtcaacacatcatccccttatgttcgtatgttctgtaagcttgaaactctggaactgcaaggacttgcatgcctcggtagaatctgtacaggaactcgtattgaatttccgtccttgaagaggttggttatagagcattgtagaaaattgaaggcgctcatctgtgaccctatgagtgataaaagtacaagaatctgcaaagaaattgaagagagggagtcagaggagagcccaagtgttgaacataagagtgttgcagaacgctgcctttttaacgacaaggtaagatttcctagcttggaggaattgaaaatcgaatttttagacgagttgcagacaatatggcacaataacaaacttgctgatcaagactctttttgccgactcaaacaagtttacgttagtcattgcaacagtctgataagtatatttccgcctagtattatggggagattgaatgctctgaaaatatgtctaatcttaagttgcaactcgctaaaagtggtatttgaagtcggaggaattaatgttgaagagacacgtgtcaacacatcatccacttatgatcagttgacacctttgtactgtcaaaatcttgaattcttgagcgtacgccacgctgacagtttgaaaaatatattcccagcgtctttggccagaggacttccgcagctacgatttctgaaggtggggttttgtcgtgatctggtggaaatagttggtgaggaagagggaggagtagaattaccaacgcctcctcagtttgtgttcccaaaggcaacagatgtgcgtttggagtctctgccccaactaaaaagtttttatccgggaaagcatacttccacgtggccattactcaaagaattgacagtaagattaaaaagaggaattaatgaagctttcaggataaacatgagtcgggcccagtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

1705

Amino Acids

195.26

Weight (kDa)

5.9

Isoelectric Point (pI)

43.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2690
AatII GACGTC 2 cut(s) 1545, 3075
Acc36I ACCTGC 1 cut(s) 2247
AccI GTMKAC 2 cut(s) 2261, 3787
AccIII TCCGGA 1 cut(s) 1518
AclWI GGATC 2 cut(s) 2051, 2343
AcoI YGGCCR 4 cut(s) 1580, 3771, 4842, 5036
AcuI CTGAAG 5 cut(s) 570, 2153, 2388, 3272, 4892
AcvI CACGTG 5 cut(s) 3101, 3644, 4187, 4730, 5034
AcyI GRCGYC 4 cut(s) 73, 85, 1542, 3072
AdeI CACNNNGTG 1 cut(s) 515
AfiI CCNNNNNNNGG 4 cut(s) 529, 2633, 3222, 4308
AflII CTTAAG 3 cut(s) 1289, 1439, 4669
AhlI ACTAGT 1 cut(s) 670
AleI CACNNNNGTG 1 cut(s) 671
Alw21I GWGCWC 1 cut(s) 2316
Alw26I GTCTC 8 cut(s) 76, 2088, 3089, 3156, 3632, 4175, 4718, 4992
AlwI GGATC 2 cut(s) 2051, 2343
Ama87I CYCGRG 3 cut(s) 914, 1878, 2309
Aor13HI TCCGGA 1 cut(s) 1518
AoxI GGCC 8 cut(s) 465, 1021, 1580, 2376, 3771, 4842, 5036, 5109
ApaI GGGCCC 1 cut(s) 5113
ApeKI GCWGC 5 cut(s) 1285, 2823, 3909, 4452, 4858
AseI ATTAAT 6 cut(s) 2400, 3084, 3627, 4170, 4713, 5079
Asp700I GAANNNNTTC 7 cut(s) 762, 2433, 2622, 2714, 3257, 3708, 3800
AspLEI GCGC 1 cut(s) 4345
AspS9I GGNCC 3 cut(s) 1623, 5109, 5110
AsuC2I CCSGG 1 cut(s) 5016
AsuHPI GGTGA 3 cut(s) 218, 2007, 4922
AsuII TTCGAA 1 cut(s) 1724
AvaI CYCGRG 3 cut(s) 914, 1878, 2309
AvaII GGWCC 1 cut(s) 1623
BaeGI GKGCMC 1 cut(s) 5113
BalI TGGCCA 4 cut(s) 1582, 3773, 4844, 5038
BanII GRGCYC 6 cut(s) 2316, 2792, 3335, 3878, 4421, 5113
BbrPI CACGTG 5 cut(s) 3101, 3644, 4187, 4730, 5034
BbsI GAAGAC 9 cut(s) 558, 869, 1058, 1196, 1233, 1637, 1875, 2055, 3770
Bbv12I GWGCWC 1 cut(s) 2316
BbvI GCAGC 5 cut(s) 1297, 2810, 3896, 4439, 4870
BccI CCATC 3 cut(s) 182, 408, 1816
BceAI ACGGC 1 cut(s) 452
BcgI CGANNNNNNTGC 6 cut(s) 2126, 2160, 2610, 2644, 3696, 3730
BclI TGATCA 6 cut(s) 1714, 2923, 3466, 4009, 4552, 4753
BcnI CCSGG 1 cut(s) 5016
BcoDI GTCTC 8 cut(s) 76, 2088, 3089, 3156, 3632, 4175, 4718, 4992
BcuI ACTAGT 1 cut(s) 670
BfoI RGCGCY 1 cut(s) 4346
BfrI CTTAAG 3 cut(s) 1289, 1439, 4669
BfuAI ACCTGC 1 cut(s) 2247
BglII AGATCT 1 cut(s) 1614
BisI GCNGC 8 cut(s) 1286, 2824, 3049, 3592, 3910, 4135, 4453, 4859
BlpI GCTNAGC 1 cut(s) 1892
BlsI GCNGC 8 cut(s) 1287, 2825, 3050, 3593, 3911, 4136, 4454, 4860
BmcAI AGTACT 3 cut(s) 2746, 3289, 3832
Bme1390I CCNGG 1 cut(s) 5016
Bme18I GGWCC 1 cut(s) 1623
BmeT110I CYCGRG 3 cut(s) 914, 1878, 2309
BmgT120I GGNCC 3 cut(s) 1623, 5109, 5110
BmiI GGNNCC 1 cut(s) 5111
BmrFI CCNGG 1 cut(s) 5016
BmrI ACTGGG 3 cut(s) 612, 1635, 5107
BmsI GCATC 3 cut(s) 319, 709, 1847
BmuI ACTGGG 3 cut(s) 612, 1635, 5107
BoxI GACNNNNGTC 4 cut(s) 3101, 3644, 4187, 4730
BpiI GAAGAC 9 cut(s) 558, 869, 1058, 1196, 1233, 1637, 1875, 2055, 3770
BplI GAGNNNNNCTC 2 cut(s) 1255, 1287
BpmI CTGGAG 1 cut(s) 324
Bpu10I CCTNAGC 2 cut(s) 1093, 1671
Bpu1102I GCTNAGC 1 cut(s) 1892
Bpu14I TTCGAA 1 cut(s) 1724
BpuEI CTTGAG 5 cut(s) 1086, 1748, 2074, 2531, 4813
BpuMI CCSGG 1 cut(s) 5016
Bsa29I ATCGAT 1 cut(s) 1855
BsaAI YACGTR 7 cut(s) 2265, 3101, 3644, 4070, 4187, 4730, 5034
BsaBI GATNNNNATC 1 cut(s) 375
BsaHI GRCGYC 4 cut(s) 73, 85, 1542, 3072
BsaI GGTCTC 1 cut(s) 3156
BsaJI CCNNGG 5 cut(s) 468, 1926, 2379, 2632, 4261
BsaWI WCCGGW 1 cut(s) 1518
BsaXI ACNNNNNCTCC 4 cut(s) 2189, 2219, 3181, 3211
Bsc4I CCNNNNNNNGG 4 cut(s) 529, 2633, 3222, 4308
Bse1I ACTGG 7 cut(s) 307, 618, 967, 1641, 2619, 3705, 5113
Bse3DI GCAATG 2 cut(s) 4063, 4594
Bse8I GATNNNNATC 1 cut(s) 375
BseAI TCCGGA 1 cut(s) 1518
BseCI ATCGAT 1 cut(s) 1855
BseDI CCNNGG 5 cut(s) 468, 1926, 2379, 2632, 4261
BseJI GATNNNNATC 1 cut(s) 375
BseLI CCNNNNNNNGG 4 cut(s) 529, 2633, 3222, 4308
BseMI GCAATG 2 cut(s) 4063, 4594
BseMII CTCAG 3 cut(s) 1662, 2079, 4961
BseNI ACTGG 7 cut(s) 307, 618, 967, 1641, 2619, 3705, 5113
BseRI GAGGAG 6 cut(s) 2798, 3341, 3884, 4427, 4935, 4938
BseSI GKGCMC 1 cut(s) 5113
BseXI GCAGC 5 cut(s) 1297, 2810, 3896, 4439, 4870
BseYI CCCAGC 2 cut(s) 2321, 4831
BsgI GTGCAG 2 cut(s) 1627, 2423
BshFI GGCC 8 cut(s) 467, 1023, 1582, 2378, 3773, 4844, 5038, 5111
BshVI ATCGAT 1 cut(s) 1855
BsiHKAI GWGCWC 1 cut(s) 2316
BsiHKCI CYCGRG 3 cut(s) 914, 1878, 2309
BsiSI CCGG 2 cut(s) 1519, 5015
BsiWI CGTACG 1 cut(s) 4798
BslFI GGGAC 2 cut(s) 381, 600
BslI CCNNNNNNNGG 4 cut(s) 529, 2633, 3222, 4308
BsmAI GTCTC 8 cut(s) 76, 2088, 3089, 3156, 3632, 4175, 4718, 4992
BsmBI CGTCTC 1 cut(s) 76
BsmFI GGGAC 2 cut(s) 381, 600
BsmI GAATGC 9 cut(s) 1494, 2119, 2714, 3022, 3257, 3565, 3800, 4108, 4651
BsnI GGCC 8 cut(s) 467, 1023, 1582, 2378, 3773, 4844, 5038, 5111
Bso31I GGTCTC 1 cut(s) 3156
BsoBI CYCGRG 3 cut(s) 914, 1878, 2309
Bsp119I TTCGAA 1 cut(s) 1724
Bsp120I GGGCCC 1 cut(s) 5109
Bsp1286I GDGCHC 6 cut(s) 2316, 2792, 3335, 3878, 4421, 5113
Bsp13I TCCGGA 1 cut(s) 1518
Bsp1407I TGTACA 2 cut(s) 1419, 4274
Bsp1720I GCTNAGC 1 cut(s) 1892
BspANI GGCC 8 cut(s) 467, 1023, 1582, 2378, 3773, 4844, 5038, 5111
BspCNI CTCAG 3 cut(s) 1663, 2080, 4960
BspDI ATCGAT 1 cut(s) 1855
BspEI TCCGGA 1 cut(s) 1518
BspLI GGNNCC 1 cut(s) 5111
BspMI ACCTGC 1 cut(s) 2247
BspPI GGATC 2 cut(s) 2051, 2343
BspQI GCTCTTC 1 cut(s) 342
BspT104I TTCGAA 1 cut(s) 1724
BspTI CTTAAG 3 cut(s) 1289, 1439, 4669
BspTNI GGTCTC 1 cut(s) 3156
BsrDI GCAATG 2 cut(s) 4063, 4594
BsrGI TGTACA 2 cut(s) 1419, 4274
BsrI ACTGG 7 cut(s) 307, 618, 967, 1641, 2619, 3705, 5113
BssECI CCNNGG 5 cut(s) 468, 1926, 2379, 2632, 4261
BssNAI GTATAC 1 cut(s) 2262
BssNI GRCGYC 4 cut(s) 73, 85, 1542, 3072
BssT1I CCWWGG 2 cut(s) 1926, 2379
Bst1107I GTATAC 1 cut(s) 2262
Bst4CI ACNGT 8 cut(s) 58, 515, 2069, 4019, 4604, 4775, 4814, 5059
BstACI GRCGYC 4 cut(s) 73, 85, 1542, 3072
BstAFI CTTAAG 3 cut(s) 1289, 1439, 4669
BstAPI GCANNNNNTGC 2 cut(s) 3186, 3729
BstAUI TGTACA 2 cut(s) 1419, 4274
BstBAI YACGTR 7 cut(s) 2265, 3101, 3644, 4070, 4187, 4730, 5034
BstBI TTCGAA 1 cut(s) 1724
BstC8I GCNNGC 4 cut(s) 334, 3053, 3172, 4258
BstDEI CTNAG 8 cut(s) 437, 1093, 1671, 1892, 1910, 2088, 2345, 4947
BstDSI CCRYGG 1 cut(s) 468
BstENI CCTNNNNNAGG 2 cut(s) 3220, 4306
BstH2I RGCGCY 1 cut(s) 4346
BstHHI GCGC 1 cut(s) 4345
BstMAI GTCTC 8 cut(s) 76, 2088, 3089, 3156, 3632, 4175, 4718, 4992
BstMWI GCNNNNNNNGC 7 cut(s) 338, 1020, 1291, 1412, 3186, 3729, 4841
BstNSI RCATGY 4 cut(s) 1482, 2590, 3174, 4260
BstPAI GACNNNNGTC 4 cut(s) 3101, 3644, 4187, 4730
BstSCI CCNGG 1 cut(s) 5014
BstSLI GKGCMC 1 cut(s) 5113
BstSNI TACGTA 1 cut(s) 4070
BstV1I GCAGC 5 cut(s) 1297, 2810, 3896, 4439, 4870
BstV2I GAAGAC 9 cut(s) 558, 869, 1058, 1196, 1233, 1637, 1875, 2055, 3770
BstX2I RGATCY 1 cut(s) 1614
BstXI CCANNNNNNTGG 3 cut(s) 302, 673, 1118
BstYI RGATCY 1 cut(s) 1614
BstZ17I GTATAC 1 cut(s) 2262
Bsu15I ATCGAT 1 cut(s) 1855
BsuRI GGCC 8 cut(s) 467, 1023, 1582, 2378, 3773, 4844, 5038, 5111
BsuTUI ATCGAT 1 cut(s) 1855
BtgI CCRYGG 1 cut(s) 468
BtsI GCAGTG 1 cut(s) 3364
BtsIMutI CAGTG 3 cut(s) 520, 625, 3364
BveI ACCTGC 1 cut(s) 2247
Cac8I GCNNGC 4 cut(s) 334, 3053, 3172, 4258
CfoI GCGC 1 cut(s) 4345
Cfr13I GGNCC 3 cut(s) 1623, 5109, 5110
ClaI ATCGAT 1 cut(s) 1855
CseI GACGC 5 cut(s) 81, 93, 145, 383, 4824
CspCI CAANNNNNGTGG 4 cut(s) 441, 476, 2181, 2216
DdeI CTNAG 8 cut(s) 437, 1093, 1671, 1892, 1910, 2088, 2345, 4947
DraI TTTAAA 2 cut(s) 1384, 1600
DraIII CACNNNGTG 1 cut(s) 515
EaeI YGGCCR 4 cut(s) 1580, 3771, 4842, 5036
EciI GGCGGA 4 cut(s) 2982, 3525, 4068, 4611
Ecl136II GAGCTC 1 cut(s) 2314
Eco105I TACGTA 1 cut(s) 4070
Eco130I CCWWGG 2 cut(s) 1926, 2379
Eco24I GRGCYC 6 cut(s) 2316, 2792, 3335, 3878, 4421, 5113
Eco31I GGTCTC 1 cut(s) 3156
Eco32I GATATC 1 cut(s) 2225
Eco47I GGWCC 1 cut(s) 1623
Eco53kI GAGCTC 1 cut(s) 2314
Eco57I CTGAAG 5 cut(s) 570, 2153, 2388, 3272, 4892
Eco72I CACGTG 5 cut(s) 3101, 3644, 4187, 4730, 5034
Eco88I CYCGRG 3 cut(s) 914, 1878, 2309
EcoICRI GAGCTC 1 cut(s) 2314
EcoNI CCTNNNNNAGG 2 cut(s) 3220, 4306
EcoRI GAATTC 2 cut(s) 275, 4787
EcoRV GATATC 1 cut(s) 2225
EcoT14I CCWWGG 2 cut(s) 1926, 2379
EcoT22I ATGCAT 2 cut(s) 1417, 1494
EcoT38I GRGCYC 6 cut(s) 2316, 2792, 3335, 3878, 4421, 5113
ErhI CCWWGG 2 cut(s) 1926, 2379
Esp3I CGTCTC 1 cut(s) 76
FaqI GGGAC 2 cut(s) 381, 600
FbaI TGATCA 6 cut(s) 1714, 2923, 3466, 4009, 4552, 4753
FblI GTMKAC 2 cut(s) 2261, 3787
Fnu4HI GCNGC 8 cut(s) 1286, 2824, 3049, 3592, 3910, 4135, 4453, 4859
FriOI GRGCYC 6 cut(s) 2316, 2792, 3335, 3878, 4421, 5113
Fsp4HI GCNGC 8 cut(s) 1286, 2824, 3049, 3592, 3910, 4135, 4453, 4859
GlaI GCGC 1 cut(s) 4344
GluI GCNGC 8 cut(s) 1286, 2824, 3049, 3592, 3910, 4135, 4453, 4859
GsaI CCCAGC 2 cut(s) 2325, 4835
GsuI CTGGAG 1 cut(s) 324
HaeII RGCGCY 1 cut(s) 4346
HaeIII GGCC 8 cut(s) 467, 1023, 1582, 2378, 3773, 4844, 5038, 5111
HapII CCGG 2 cut(s) 1519, 5015
HgaI GACGC 5 cut(s) 81, 93, 145, 383, 4824
HhaI GCGC 1 cut(s) 4345
Hin1I GRCGYC 4 cut(s) 73, 85, 1542, 3072
Hin6I GCGC 1 cut(s) 4343
HinP1I GCGC 1 cut(s) 4343
HincII GTYRAC 8 cut(s) 450, 2956, 3106, 3499, 3649, 4192, 4735, 4761
HindII GTYRAC 8 cut(s) 450, 2956, 3106, 3499, 3649, 4192, 4735, 4761
HindIII AAGCTT 6 cut(s) 1242, 2597, 3140, 3683, 4226, 5085
HpaII CCGG 2 cut(s) 1519, 5015
HphI GGTGA 3 cut(s) 218, 2007, 4922
Hpy99I CGWCG 2 cut(s) 161, 3077
HpyCH4III ACNGT 8 cut(s) 58, 515, 2069, 4019, 4604, 4775, 4814, 5059
HpyF10VI GCNNNNNNNGC 7 cut(s) 338, 1020, 1291, 1412, 3186, 3729, 4841
HpyF3I CTNAG 8 cut(s) 437, 1093, 1671, 1892, 1910, 2088, 2345, 4947
Hsp92I GRCGYC 4 cut(s) 73, 85, 1542, 3072
HspAI GCGC 1 cut(s) 4343
Kpn2I TCCGGA 1 cut(s) 1518
Ksp22I TGATCA 6 cut(s) 1714, 2923, 3466, 4009, 4552, 4753
LguI GCTCTTC 1 cut(s) 342
LmnI GCTCC 2 cut(s) 191, 2128
Lsp1109I GCAGC 5 cut(s) 1297, 2810, 3896, 4439, 4870
LweI GCATC 3 cut(s) 319, 709, 1847
MaeIII GTNAC 9 cut(s) 23, 694, 1066, 1265, 1797, 2723, 3266, 3809, 4352
MfeI CAATTG 2 cut(s) 18, 3791
MflI RGATCY 1 cut(s) 1614
MhlI GDGCHC 6 cut(s) 2316, 2792, 3335, 3878, 4421, 5113
MlsI TGGCCA 4 cut(s) 1582, 3773, 4844, 5038
MluNI TGGCCA 4 cut(s) 1582, 3773, 4844, 5038
Mox20I TGGCCA 4 cut(s) 1582, 3773, 4844, 5038
Mph1103I ATGCAT 2 cut(s) 1417, 1494
MroI TCCGGA 1 cut(s) 1518
MroXI GAANNNNTTC 7 cut(s) 762, 2433, 2622, 2714, 3257, 3708, 3800
MscI TGGCCA 4 cut(s) 1582, 3773, 4844, 5038
MslI CAYNNNNRTG 7 cut(s) 222, 635, 671, 2808, 3351, 3894, 4437
Msp20I TGGCCA 4 cut(s) 1582, 3773, 4844, 5038
MspCI CTTAAG 3 cut(s) 1289, 1439, 4669
MspI CCGG 2 cut(s) 1519, 5015
MspR9I CCNGG 1 cut(s) 5016
MunI CAATTG 2 cut(s) 18, 3791
Mva1269I GAATGC 9 cut(s) 1494, 2119, 2714, 3022, 3257, 3565, 3800, 4108, 4651
MwoI GCNNNNNNNGC 7 cut(s) 338, 1020, 1291, 1412, 3186, 3729, 4841
NciI CCSGG 1 cut(s) 5016
NlaIV GGNNCC 1 cut(s) 5111
NmeAIII GCCGAG 2 cut(s) 73, 990
NmuCI GTSAC 5 cut(s) 1797, 2723, 3266, 3809, 4352
NsiI ATGCAT 2 cut(s) 1417, 1494
NspI RCATGY 4 cut(s) 1482, 2590, 3174, 4260
NspV TTCGAA 1 cut(s) 1724
OliI CACNNNNGTG 1 cut(s) 671
PaeI GCATGC 2 cut(s) 3174, 4260
PaeR7I CTCGAG 2 cut(s) 1878, 2309
PciI ACATGT 2 cut(s) 1478, 2586
PciSI GCTCTTC 1 cut(s) 342
PctI GAATGC 9 cut(s) 1494, 2119, 2714, 3022, 3257, 3565, 3800, 4108, 4651
PdmI GAANNNNTTC 7 cut(s) 762, 2433, 2622, 2714, 3257, 3708, 3800
PfeI GAWTC 7 cut(s) 118, 569, 1076, 2876, 3414, 4269, 4380
Pfl23II CGTACG 1 cut(s) 4798
PfoI TCCNGGA 1 cut(s) 5014
PkrI GCNGC 8 cut(s) 1287, 2825, 3050, 3593, 3911, 4136, 4454, 4860
PmaCI CACGTG 5 cut(s) 3101, 3644, 4187, 4730, 5034
PmlI CACGTG 5 cut(s) 3101, 3644, 4187, 4730, 5034
Ppu21I YACGTR 7 cut(s) 2265, 3101, 3644, 4070, 4187, 4730, 5034
PscI ACATGT 2 cut(s) 1478, 2586
PshAI GACNNNNGTC 4 cut(s) 3101, 3644, 4187, 4730
PshBI ATTAAT 6 cut(s) 2400, 3084, 3627, 4170, 4713, 5079
PsiI TTATAA 1 cut(s) 2690
Psp124BI GAGCTC 1 cut(s) 2316
PspCI CACGTG 5 cut(s) 3101, 3644, 4187, 4730, 5034
PspFI CCCAGC 2 cut(s) 2321, 4831
PspLI CGTACG 1 cut(s) 4798
PspN4I GGNNCC 1 cut(s) 5111
PspOMI GGGCCC 1 cut(s) 5109
PspPI GGNCC 3 cut(s) 1623, 5109, 5110
PspXI VCTCGAGB 2 cut(s) 1878, 2309
PsuI RGATCY 1 cut(s) 1614
RseI CAYNNNNRTG 7 cut(s) 222, 635, 671, 2808, 3351, 3894, 4437
SacI GAGCTC 1 cut(s) 2316
SapI GCTCTTC 1 cut(s) 342
SatI GCNGC 8 cut(s) 1286, 2824, 3049, 3592, 3910, 4135, 4453, 4859
Sau96I GGNCC 3 cut(s) 1623, 5109, 5110
ScaI AGTACT 3 cut(s) 2746, 3289, 3832
ScrFI CCNGG 1 cut(s) 5016
SduI GDGCHC 6 cut(s) 2316, 2792, 3335, 3878, 4421, 5113
SfaNI GCATC 3 cut(s) 319, 709, 1847
Sfr274I CTCGAG 2 cut(s) 1878, 2309
SfuI TTCGAA 1 cut(s) 1724
SinI GGWCC 1 cut(s) 1623
SlaI CTCGAG 2 cut(s) 1878, 2309
SmiMI CAYNNNNRTG 7 cut(s) 222, 635, 671, 2808, 3351, 3894, 4437
SnaBI TACGTA 1 cut(s) 4070
SpeI ACTAGT 1 cut(s) 670
SphI GCATGC 2 cut(s) 3174, 4260
SspI AATATT 1 cut(s) 1595
SstI GAGCTC 1 cut(s) 2316
StyD4I CCNGG 1 cut(s) 5014
StyI CCWWGG 2 cut(s) 1926, 2379
TaaI ACNGT 8 cut(s) 58, 515, 2069, 4019, 4604, 4775, 4814, 5059
TauI GCSGC 3 cut(s) 3051, 3594, 4137
TfiI GAWTC 7 cut(s) 118, 569, 1076, 2876, 3414, 4269, 4380
TscAI CASTG 3 cut(s) 520, 625, 3371
TseFI GTSAC 5 cut(s) 1797, 2723, 3266, 3809, 4352
TseI GCWGC 5 cut(s) 1285, 2823, 3909, 4452, 4858
Tsp45I GTSAC 5 cut(s) 1797, 2723, 3266, 3809, 4352
TspGWI ACGGA 7 cut(s) 811, 1250, 1479, 2658, 3201, 3744, 4287
TspRI CASTG 3 cut(s) 520, 625, 3371
Vha464I CTTAAG 3 cut(s) 1289, 1439, 4669
VpaK11BI GGWCC 1 cut(s) 1623
VspI ATTAAT 6 cut(s) 2400, 3084, 3627, 4170, 4713, 5079
XagI CCTNNNNNAGG 2 cut(s) 3220, 4306
XbaI TCTAGA 1 cut(s) 956
XceI RCATGY 4 cut(s) 1482, 2590, 3174, 4260
XhoI CTCGAG 2 cut(s) 1878, 2309
XmiI GTMKAC 2 cut(s) 2261, 3787
XmnI GAANNNNTTC 7 cut(s) 762, 2433, 2622, 2714, 3257, 3708, 3800
ZraI GACGTC 2 cut(s) 1543, 3073
ZrmI AGTACT 3 cut(s) 2746, 3289, 3832
Zsp2I ATGCAT 2 cut(s) 1417, 1494
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.