Rmu_sc0013807.1_g000005

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0013807.1
Physical Location & Seq
Forward (+)
21423 .. 25429
4007 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0013807.1_g000005.1.cds

Sequence Viewer

Length: 2631 bp
atgatctttcttaataactgcagtatcccccatcttcctgaaggtttagaatgtccagaactgaaaatgtttatcttttctagtagggattttgatcactgcttgaaaattcccagcaacttttttgaagggatgaagaaactcagtgtgttggacttgactagattaagtatcccatcattgcctccatctcttcaattcctagaaagtcttcaaacgttgtgtttggaacaatgcacattgggagacctaactttagttggagagctaagaaacttagaaatccttagctttacaatgtccaagtttagaaagttgcccaaagaaatagggcaattgatgcgtctccgattgttggatttgaatggttgctctcaacttgaagtgatttcacctaatgttatatcaaacttgaaaaggttagaaaacttgagaatgggtaacaactttaaccgatgggagggtgaaggagtcatcagtagtgaaagaagaaatgcaaaccttgaagagctaaagcacttgcctcagctaactgctttacaaatacatatcccagatgctaacatccttccagtagatttgttcaccactagtaagttaaggagattccaaatatgtattggttctgcgtggaaatgggataatgtggatgaagccctcaatgcactaaagctccgactcactgctagcaatgaaatggaccaaggtctaagaatgttgctaaaaagaactgaagacttgtacttggaggggacagaggatgttaataatagtattgtctaccaaataggtgtcgaaggttttcagaaattgaagcatctccatctccaaacgaatgtcgagtttacgtgtatcataaatgagaaggttaggtatcccaacttaacatggttggcggtgaatgaattcgatggtttaacattcttgttatcatcttcaatggctagaagccttgcacaactcaaacgtcttcaagtatcaggatgtcagataatggaagagatagtagagtttccaaacttgaaggagttatccattggtggcctagcaaagttgacaagaatatggaacaatcaacttgctctagagagtacaaaaaatatagagacaatagaaattgtttcgtgtgacaatttgaaaagtatttttccagcgtcagtggccagtcttcaacagttgaagagcttaatagtgaaaaattgtggggtggaggaaatcgtttcgaaagaggacgatgtacaaacaacacctttgtttgttttctcaaaactaacatttgtgagatttgacaatttgcccaatcttgggagtttctatccaggatcgtatgcttgcaactggccgtcagtcaaaactttatctgtgtataattgtactaaagtgcagatatttgcagatgctatgcgtgagttgaataatctttgcactccaagtaaacaatctctgtttttactcgaaaaggattcattccccaacttggaatttttgaggttggaagtacgggagaattggggtagtgtgccactccacttgcttatgaagctaaaatctctttgtacctgtgcatatacgaactcctctttgaattcccttgagaaattacttggtcttgaaaaagtcaatagagaaatacatacagttagggatgggaccctcccacatttaagagagttgtacctttacgggatgcggaagctgatgaatcttggggaggatagcttcggaccagcatgcccatattttccaaatctgaaaattctgaagctagaggactgtgacagcttaaagaatttaagatcatccgcaatatccttcaagaatctaacaactttgcaagtaagtcgttgtaagggattgaaatacttgatatctttctccatggccaaaagtttgttgcatctcacaaaactggaagtccaggattgtgaggaaatgatagaaatagtggggagcaatgaaaatgatgatttagaaaatgagattgaattcaaggtgttgaaacatttgaaactttttgctctaccaagtttaagaggcttttgctcgggaactcgtattgttaaatttccatctttggaaaaattatccgtgagttgtactcaactggagacgttcatctttgattctatgggtaaaagtaatacaattggccaggacatcaaagacaccgactcaagcgaaaaccgtgagattgaagtagtgcaaccttttctttttgacaacaaggttgaatttcctaggttggagagtttgtctctcaagggtttgacaaagttgaccacaatatggcatagtcaactttctctaaactccttcagtagactcaaagaccttgaagtatatggatgtggaaatataataaatatctttgtgcccagtactataggaagattgagtgttcttcagaccttattgataaaggagtgcaagtctgtacaagatgtatttgaacttggaggaattgatgttagaggaatacatgacacgtcagctgcaactcagctgagatcttgtgactgccaaaatctagaatcagttgaaattgattcttgtgagaatttgaaaaacattttccctgtttctgtggctagaaatcttcgacagttaacaaggctgatagtgacaaactga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

876

Amino Acids

99.35

Weight (kDa)

6.12

Isoelectric Point (pI)

47.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 2286
AccI GTMKAC 2 cut(s) 780, 2320
AciI CCGC 3 cut(s) 896, 1690, 1803
AclI AACGTT 1 cut(s) 218
AclWI GGATC 1 cut(s) 1330
AcoI YGGCCR 4 cut(s) 1161, 1340, 1881, 2149
AcuI CTGAAG 5 cut(s) 60, 753, 1781, 2299, 2387
AfiI CCNNNNNNNGG 6 cut(s) 355, 460, 1304, 1305, 1477, 2286
AflIII ACRYGT 2 cut(s) 848, 2484
AhlI ACTAGT 1 cut(s) 590
AjiI CACGTC 1 cut(s) 2487
AjnI CCWGG 3 cut(s) 1318, 1917, 2151
Alw26I GTCTC 5 cut(s) 240, 350, 1100, 2102, 2259
AlwI GGATC 1 cut(s) 1330
Ama87I CYCGRG 1 cut(s) 2044
AoxI GGCC 5 cut(s) 1042, 1161, 1340, 1881, 2149
ApeKI GCWGC 1 cut(s) 2492
Asp700I GAANNNNTTC 3 cut(s) 210, 801, 905
AspA2I CCTAGG 1 cut(s) 2237
AspS9I GGNCC 3 cut(s) 700, 1650, 1724
AsuHPI GGTGA 4 cut(s) 384, 476, 577, 910
AsuII TTCGAA 1 cut(s) 1223
AsuNHI GCTAGC 1 cut(s) 686
AvaI CYCGRG 1 cut(s) 2044
AvaII GGWCC 3 cut(s) 700, 1650, 1724
AvrII CCTAGG 1 cut(s) 2237
BaeGI GKGCMC 1 cut(s) 2376
BaeI ACNNNNGTAYC 2 cut(s) 7, 40
BalI TGGCCA 3 cut(s) 1163, 1883, 2151
BbsI GAAGAC 4 cut(s) 203, 741, 962, 1160
BbvCI CCTCAGC 1 cut(s) 525
BbvI GCAGC 1 cut(s) 2479
BccI CCATC 8 cut(s) 39, 184, 196, 450, 831, 905, 1640, 2077
BceAI ACGGC 1 cut(s) 1327
BcgI CGANNNNNNTGC 2 cut(s) 1823, 1857
BciT130I CCWGG 3 cut(s) 1320, 1919, 2153
BciVI GTATCC 3 cut(s) 35, 182, 885
BclI TGATCA 1 cut(s) 94
BcoDI GTCTC 5 cut(s) 240, 350, 1100, 2102, 2259
BcuI ACTAGT 1 cut(s) 590
BfmI CTRYAG 2 cut(s) 19, 2382
BfuI GTATCC 3 cut(s) 35, 182, 885
BglII AGATCT 1 cut(s) 2507
BisI GCNGC 1 cut(s) 2493
BlnI CCTAGG 1 cut(s) 2237
BlsI GCNGC 1 cut(s) 2494
BmcAI AGTACT 1 cut(s) 2380
Bme1390I CCNGG 3 cut(s) 1320, 1919, 2153
Bme18I GGWCC 3 cut(s) 700, 1650, 1724
BmeT110I CYCGRG 1 cut(s) 2044
BmgBI CACGTC 1 cut(s) 2487
BmgT120I GGNCC 3 cut(s) 700, 1650, 1724
BmiI GGNNCC 2 cut(s) 1651, 1652
BmrFI CCNGG 3 cut(s) 1320, 1919, 2153
BmrI ACTGGG 1 cut(s) 2370
BmsI GCATC 6 cut(s) 330, 547, 826, 1387, 1677, 1906
BmtI GCTAGC 1 cut(s) 690
BmuI ACTGGG 1 cut(s) 2370
BoxI GACNNNNGTC 1 cut(s) 705
BpiI GAAGAC 4 cut(s) 203, 741, 962, 1160
BplI GAGNNNNNCTC 4 cut(s) 2083, 2115, 2239, 2271
BpmI CTGGAG 1 cut(s) 2126
Bpu10I CCTNAGC 2 cut(s) 287, 525
Bpu14I TTCGAA 1 cut(s) 1223
BpuEI CTTGAG 4 cut(s) 451, 1613, 2158, 2243
BsaAI YACGTR 1 cut(s) 849
BsaBI GATNNNNATC 1 cut(s) 93
BsaI GGTCTC 1 cut(s) 240
BsaJI CCNNGG 3 cut(s) 703, 1878, 2237
BsaXI ACNNNNNCTCC 6 cut(s) 657, 687, 2237, 2267, 2414, 2444
Bsc4I CCNNNNNNNGG 6 cut(s) 355, 460, 1304, 1305, 1477, 2286
Bse1I ACTGG 6 cut(s) 572, 1164, 1343, 1914, 2109, 2376
Bse3DI GCAATG 3 cut(s) 179, 697, 1960
Bse8I GATNNNNATC 1 cut(s) 93
BseBI CCWGG 3 cut(s) 1320, 1919, 2153
BseDI CCNNGG 3 cut(s) 703, 1878, 2237
BseGI GGATG 9 cut(s) 138, 564, 655, 766, 989, 1651, 1692, 1799, 2351
BseJI GATNNNNATC 1 cut(s) 93
BseLI CCNNNNNNNGG 6 cut(s) 355, 460, 1304, 1305, 1477, 2286
BseMI GCAATG 3 cut(s) 179, 697, 1960
BseMII CTCAG 4 cut(s) 157, 539, 2495, 2513
BseNI ACTGG 6 cut(s) 572, 1164, 1343, 1914, 2109, 2376
BseRI GAGGAG 1 cut(s) 1567
BseSI GKGCMC 1 cut(s) 2376
BseXI GCAGC 1 cut(s) 2479
BseYI CCCAGC 1 cut(s) 113
BsgI GTGCAG 1 cut(s) 1403
BshFI GGCC 5 cut(s) 1044, 1163, 1342, 1883, 2151
BsiHKCI CYCGRG 1 cut(s) 2044
BslFI GGGAC 2 cut(s) 766, 1663
BslI CCNNNNNNNGG 6 cut(s) 355, 460, 1304, 1305, 1477, 2286
BsmAI GTCTC 5 cut(s) 240, 350, 1100, 2102, 2259
BsmBI CGTCTC 2 cut(s) 350, 2102
BsmFI GGGAC 2 cut(s) 766, 1663
BsnI GGCC 5 cut(s) 1044, 1163, 1342, 1883, 2151
Bso31I GGTCTC 1 cut(s) 240
BsoBI CYCGRG 1 cut(s) 2044
Bsp119I TTCGAA 1 cut(s) 1223
Bsp1286I GDGCHC 1 cut(s) 2376
Bsp1407I TGTACA 2 cut(s) 1237, 2434
Bsp143I GATC 5 cut(s) 3, 94, 1322, 1796, 2507
Bsp19I CCATGG 1 cut(s) 1878
BspACI CCGC 3 cut(s) 896, 1690, 1803
BspANI GGCC 5 cut(s) 1044, 1163, 1342, 1883, 2151
BspCNI CTCAG 4 cut(s) 156, 538, 2496, 2512
BspLI GGNNCC 2 cut(s) 1651, 1652
BspMAI CTGCAG 1 cut(s) 23
BspOI GCTAGC 1 cut(s) 690
BspPI GGATC 1 cut(s) 1330
BspQI GCTCTTC 2 cut(s) 501, 1175
BspT104I TTCGAA 1 cut(s) 1223
BspTNI GGTCTC 1 cut(s) 240
BsrDI GCAATG 3 cut(s) 179, 697, 1960
BsrGI TGTACA 2 cut(s) 1237, 2434
BsrI ACTGG 6 cut(s) 572, 1164, 1343, 1914, 2109, 2376
BssECI CCNNGG 3 cut(s) 703, 1878, 2237
BssMI GATC 5 cut(s) 3, 94, 1322, 1796, 2507
BssT1I CCWWGG 3 cut(s) 703, 1878, 2237
Bst2UI CCWGG 3 cut(s) 1320, 1919, 2153
Bst4CI ACNGT 5 cut(s) 1176, 1639, 1775, 2186, 2604
Bst6I CTCTTC 4 cut(s) 198, 501, 993, 1175
BstAPI GCANNNNNTGC 1 cut(s) 340
BstAUI TGTACA 2 cut(s) 1237, 2434
BstBAI YACGTR 1 cut(s) 849
BstBI TTCGAA 1 cut(s) 1223
BstC8I GCNNGC 3 cut(s) 688, 1333, 1732
BstDEI CTNAG 8 cut(s) 143, 269, 277, 287, 525, 710, 2499, 2504
BstDSI CCRYGG 1 cut(s) 1878
BstF5I GGATG 9 cut(s) 138, 564, 655, 766, 989, 1651, 1692, 1799, 2351
BstKTI GATC 5 cut(s) 6, 97, 1325, 1799, 2510
BstMAI GTCTC 5 cut(s) 240, 350, 1100, 2102, 2259
BstMBI GATC 5 cut(s) 3, 94, 1322, 1796, 2507
BstMWI GCNNNNNNNGC 4 cut(s) 340, 662, 1160, 1540
BstNI CCWGG 3 cut(s) 1320, 1919, 2153
BstNSI RCATGY 1 cut(s) 1734
BstPAI GACNNNNGTC 1 cut(s) 705
BstSCI CCNGG 3 cut(s) 1318, 1917, 2151
BstSFI CTRYAG 2 cut(s) 19, 2382
BstSLI GKGCMC 1 cut(s) 2376
BstV1I GCAGC 1 cut(s) 2479
BstV2I GAAGAC 4 cut(s) 203, 741, 962, 1160
BstX2I RGATCY 1 cut(s) 2507
BstYI RGATCY 1 cut(s) 2507
BsuI GTATCC 3 cut(s) 35, 182, 885
BsuRI GGCC 5 cut(s) 1044, 1163, 1342, 1883, 2151
BtgI CCRYGG 1 cut(s) 1878
BtrI CACGTC 1 cut(s) 2487
BtsCI GGATG 9 cut(s) 138, 564, 655, 766, 989, 1651, 1692, 1799, 2351
BtsI GCAGTG 2 cut(s) 97, 681
BtsIMutI CAGTG 4 cut(s) 97, 151, 681, 1164
Cac8I GCNNGC 3 cut(s) 688, 1333, 1732
Cfr13I GGNCC 3 cut(s) 700, 1650, 1724
CseI GACGC 2 cut(s) 332, 1143
CspCI CAANNNNNGTGG 2 cut(s) 1512, 1547
CviAII CATG 4 cut(s) 888, 1731, 1879, 2480
DdeI CTNAG 8 cut(s) 143, 269, 277, 287, 525, 710, 2499, 2504
DpnI GATC 5 cut(s) 5, 96, 1324, 1798, 2509
DpnII GATC 5 cut(s) 3, 94, 1322, 1796, 2507
EaeI YGGCCR 4 cut(s) 1161, 1340, 1881, 2149
Eam1104I CTCTTC 4 cut(s) 198, 501, 993, 1175
EarI CTCTTC 4 cut(s) 198, 501, 993, 1175
Eco130I CCWWGG 3 cut(s) 703, 1878, 2237
Eco31I GGTCTC 1 cut(s) 240
Eco32I GATATC 1 cut(s) 1869
Eco47I GGWCC 3 cut(s) 700, 1650, 1724
Eco57I CTGAAG 5 cut(s) 60, 753, 1781, 2299, 2387
Eco88I CYCGRG 1 cut(s) 2044
EcoO109I RGGNCCY 1 cut(s) 1650
EcoRI GAATTC 3 cut(s) 905, 1585, 1985
EcoRII CCWGG 3 cut(s) 1318, 1917, 2151
EcoRV GATATC 1 cut(s) 1869
EcoT14I CCWWGG 3 cut(s) 703, 1878, 2237
ErhI CCWWGG 3 cut(s) 703, 1878, 2237
Esp3I CGTCTC 2 cut(s) 350, 2102
FaeI CATG 4 cut(s) 891, 1734, 1882, 2483
FaqI GGGAC 2 cut(s) 766, 1663
FatI CATG 4 cut(s) 887, 1730, 1878, 2479
FbaI TGATCA 1 cut(s) 94
FblI GTMKAC 2 cut(s) 780, 2320
Fnu4HI GCNGC 1 cut(s) 2493
FokI GGATG 9 cut(s) 145, 551, 662, 773, 996, 1658, 1699, 1786, 2358
Fsp4HI GCNGC 1 cut(s) 2493
GluI GCNGC 1 cut(s) 2493
GsaI CCCAGC 1 cut(s) 117
GsuI CTGGAG 1 cut(s) 2126
HaeIII GGCC 5 cut(s) 1044, 1163, 1342, 1883, 2151
HgaI GACGC 2 cut(s) 332, 1143
Hin1II CATG 4 cut(s) 891, 1734, 1882, 2483
HincII GTYRAC 4 cut(s) 1056, 2277, 2297, 2607
HindII GTYRAC 4 cut(s) 1056, 2277, 2297, 2607
HpaI GTTAAC 1 cut(s) 2607
HphI GGTGA 4 cut(s) 384, 476, 577, 910
Hpy166II GTNNAC 9 cut(s) 585, 781, 846, 1056, 1436, 2277, 2297, 2321, 2607
Hpy188I TCNGA 8 cut(s) 350, 677, 807, 990, 1724, 1752, 1761, 2406
Hpy188III TCNNGA 8 cut(s) 38, 56, 981, 1085, 1610, 1816, 2046, 2528
Hpy8I GTNNAC 9 cut(s) 585, 781, 846, 1056, 1436, 2277, 2297, 2321, 2607
HpyAV CCTTC 9 cut(s) 35, 122, 461, 578, 791, 859, 1018, 1822, 2323
HpyCH4III ACNGT 5 cut(s) 1176, 1639, 1775, 2186, 2604
HpyCH4IV ACGT 5 cut(s) 218, 848, 967, 2111, 2486
HpyF10VI GCNNNNNNNGC 4 cut(s) 340, 662, 1160, 1540
HpyF3I CTNAG 8 cut(s) 143, 269, 277, 287, 525, 710, 2499, 2504
HpySE526I ACGT 5 cut(s) 218, 848, 967, 2111, 2486
Hsp92II CATG 4 cut(s) 891, 1734, 1882, 2483
KflI GGGWCCC 1 cut(s) 1650
Ksp22I TGATCA 1 cut(s) 94
KspAI GTTAAC 1 cut(s) 2607
Kzo9I GATC 5 cut(s) 3, 94, 1322, 1796, 2507
LguI GCTCTTC 2 cut(s) 501, 1175
LmnI GCTCC 2 cut(s) 678, 1950
Lsp1109I GCAGC 1 cut(s) 2479
LweI GCATC 6 cut(s) 330, 547, 826, 1387, 1677, 1906
MaeII ACGT 5 cut(s) 218, 848, 967, 2111, 2486
MaeIII GTNAC 5 cut(s) 440, 1127, 1775, 2513, 2620
MalI GATC 5 cut(s) 5, 96, 1324, 1798, 2509
MboI GATC 5 cut(s) 3, 94, 1322, 1796, 2507
MfeI CAATTG 2 cut(s) 335, 2145
MflI RGATCY 1 cut(s) 2507
MhlI GDGCHC 1 cut(s) 2376
MlsI TGGCCA 3 cut(s) 1163, 1883, 2151
MluNI TGGCCA 3 cut(s) 1163, 1883, 2151
MlyI GAGTC 4 cut(s) 480, 672, 2165, 2316
MmeI TCCRAC 6 cut(s) 132, 241, 336, 700, 1473, 2223
Mox20I TGGCCA 3 cut(s) 1163, 1883, 2151
MroXI GAANNNNTTC 3 cut(s) 210, 801, 905
MscI TGGCCA 3 cut(s) 1163, 1883, 2151
Msp20I TGGCCA 3 cut(s) 1163, 1883, 2151
MspA1I CMGCKG 2 cut(s) 2492, 2503
MspR9I CCNGG 3 cut(s) 1320, 1919, 2153
MunI CAATTG 2 cut(s) 335, 2145
MvaI CCWGG 3 cut(s) 1320, 1919, 2153
MwoI GCNNNNNNNGC 4 cut(s) 340, 662, 1160, 1540
NcoI CCATGG 1 cut(s) 1878
NdeII GATC 5 cut(s) 3, 94, 1322, 1796, 2507
NheI GCTAGC 1 cut(s) 686
NlaIII CATG 4 cut(s) 891, 1734, 1882, 2483
NlaIV GGNNCC 2 cut(s) 1651, 1652
NmuCI GTSAC 4 cut(s) 1127, 1775, 2513, 2620
NspI RCATGY 1 cut(s) 1734
NspV TTCGAA 1 cut(s) 1223
PaeI GCATGC 1 cut(s) 1734
PciSI GCTCTTC 2 cut(s) 501, 1175
PdmI GAANNNNTTC 3 cut(s) 210, 801, 905
PfeI GAWTC 7 cut(s) 606, 1463, 1702, 1819, 2123, 2531, 2546
PflMI CCANNNNNTGG 1 cut(s) 2286
PfoI TCCNGGA 2 cut(s) 1318, 1917
PkrI GCNGC 1 cut(s) 2494
PleI GAGTC 4 cut(s) 479, 672, 2165, 2316
PpsI GAGTC 4 cut(s) 479, 672, 2165, 2316
Ppu21I YACGTR 1 cut(s) 849
PpuMI RGGWCCY 1 cut(s) 1650
PshAI GACNNNNGTC 1 cut(s) 705
Psp1406I AACGTT 1 cut(s) 218
Psp5II RGGWCCY 1 cut(s) 1650
Psp6I CCWGG 3 cut(s) 1318, 1917, 2151
PspFI CCCAGC 1 cut(s) 113
PspGI CCWGG 3 cut(s) 1318, 1917, 2151
PspN4I GGNNCC 2 cut(s) 1651, 1652
PspPI GGNCC 3 cut(s) 700, 1650, 1724
PspPPI RGGWCCY 1 cut(s) 1650
PstI CTGCAG 1 cut(s) 23
PsuI RGATCY 1 cut(s) 2507
PvuII CAGCTG 2 cut(s) 2492, 2503
SapI GCTCTTC 2 cut(s) 501, 1175
SatI GCNGC 1 cut(s) 2493
Sau3AI GATC 5 cut(s) 3, 94, 1322, 1796, 2507
Sau96I GGNCC 3 cut(s) 700, 1650, 1724
ScaI AGTACT 1 cut(s) 2380
SchI GAGTC 4 cut(s) 480, 672, 2165, 2316
ScrFI CCNGG 3 cut(s) 1320, 1919, 2153
SduI GDGCHC 1 cut(s) 2376
SfaNI GCATC 6 cut(s) 330, 547, 826, 1387, 1677, 1906
SfcI CTRYAG 2 cut(s) 19, 2382
SfuI TTCGAA 1 cut(s) 1223
SinI GGWCC 3 cut(s) 700, 1650, 1724
SmlI CTYRAG 4 cut(s) 430, 1592, 2173, 2258
SmoI CTYRAG 4 cut(s) 430, 1592, 2173, 2258
SpeI ACTAGT 1 cut(s) 590
SphI GCATGC 1 cut(s) 1734
SsiI CCGC 3 cut(s) 896, 1690, 1803
StyD4I CCNGG 3 cut(s) 1318, 1917, 2151
StyI CCWWGG 3 cut(s) 703, 1878, 2237
TaaI ACNGT 5 cut(s) 1176, 1639, 1775, 2186, 2604
TaiI ACGT 5 cut(s) 221, 851, 970, 2114, 2489
TaqI TCGA 6 cut(s) 795, 840, 909, 1223, 1455, 2599
TatI WGTACW 7 cut(s) 741, 1091, 1237, 1373, 2096, 2378, 2434
TfiI GAWTC 7 cut(s) 606, 1463, 1702, 1819, 2123, 2531, 2546
TscAI CASTG 4 cut(s) 104, 151, 688, 1164
TseFI GTSAC 4 cut(s) 1127, 1775, 2513, 2620
TseI GCWGC 1 cut(s) 2492
Tsp45I GTSAC 4 cut(s) 1127, 1775, 2513, 2620
TspDTI ATGAA 9 cut(s) 149, 666, 708, 918, 1455, 1553, 1715, 1971, 2104
TspGWI ACGGA 1 cut(s) 2077
TspRI CASTG 4 cut(s) 104, 151, 688, 1164
Van91I CCANNNNNTGG 1 cut(s) 2286
VpaK11BI GGWCC 3 cut(s) 700, 1650, 1724
XbaI TCTAGA 2 cut(s) 1084, 2527
XceI RCATGY 1 cut(s) 1734
XcmI CCANNNNNNNNNTGG 1 cut(s) 617
XmaJI CCTAGG 1 cut(s) 2237
XmiI GTMKAC 2 cut(s) 780, 2320
XmnI GAANNNNTTC 3 cut(s) 210, 801, 905
ZrmI AGTACT 1 cut(s) 2380
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.