disease resistance
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NB-ARC | PF00931 | 159 - 322 | 2.2e-31 | NB-ARC domain |
| LRR_14 | PF23598 | 517 - 811 | 1.1e-11 | Leucine-rich repeat region |
| LRR_RPS2 | PF23247 | 782 - 897 | 7.6e-13 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
| LRR_RPS2 | PF23247 | 887 - 984 | 3.1e-13 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
| LRR_RPS2 | PF23247 | 1079 - 1203 | 4.4e-09 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
| LRR_RPS2 | PF23247 | 1202 - 1302 | 6.7e-10 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 953 |
| Acc36I | ACCTGC | 2 cut(s) | 953, 991 |
| Acc65I | GGTACC | 2 cut(s) | 23, 2130 |
| AccB1I | GGYRCC | 2 cut(s) | 23, 2130 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 493, 1678, 4735 |
| AccBSI | CCGCTC | 1 cut(s) | 2865 |
| AccI | GTMKAC | 5 cut(s) | 1366, 1873, 2856, 2914, 4029 |
| AccII | CGCG | 1 cut(s) | 4888 |
| AclI | AACGTT | 1 cut(s) | 108 |
| AclWI | GGATC | 3 cut(s) | 132, 4376, 4965 |
| AcoI | YGGCCR | 4 cut(s) | 1493, 1789, 3086, 4182 |
| AcsI | RAATTY | 8 cut(s) | 666, 943, 3029, 3311, 3359, 3547, 3637, 3875 |
| AcuI | CTGAAG | 9 cut(s) | 459, 1587, 1760, 2486, 4115, 4284, 4335, 4380, 4830 |
| AcyI | GRCGYC | 1 cut(s) | 73 |
| AdeI | CACNNNGTG | 1 cut(s) | 1925 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 493, 1678, 1987, 3051, 3886, 4735 |
| AflII | CTTAAG | 2 cut(s) | 1196, 1352 |
| AflIII | ACRYGT | 3 cut(s) | 1453, 3943, 4117 |
| AjiI | CACGTC | 1 cut(s) | 737 |
| AjnI | CCWGG | 2 cut(s) | 3080, 3538 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 3192, 3224 |
| Alw21I | GWGCWC | 3 cut(s) | 736, 1526, 2040 |
| Alw26I | GTCTC | 4 cut(s) | 594, 710, 1099, 2843 |
| Alw44I | GTGCAC | 2 cut(s) | 732, 1522 |
| AlwI | GGATC | 3 cut(s) | 132, 4376, 4965 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 2344, 2631, 4403 |
| Ama87I | CYCGRG | 1 cut(s) | 4541 |
| AoxI | GGCC | 9 cut(s) | 1493, 1789, 3086, 3138, 3459, 3541, 4182, 4291, 4554 |
| ApaI | GGGCCC | 1 cut(s) | 3463 |
| ApaLI | GTGCAC | 2 cut(s) | 732, 1522 |
| ApeKI | GCWGC | 8 cut(s) | 2150, 4123, 4360, 4400, 4403, 4627, 4739, 4849 |
| ApoI | RAATTY | 8 cut(s) | 666, 943, 3029, 3311, 3359, 3547, 3637, 3875 |
| AseI | ATTAAT | 1 cut(s) | 2388 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 947, 2334, 3315 |
| Asp718I | GGTACC | 2 cut(s) | 23, 2130 |
| AspLEI | GCGC | 3 cut(s) | 64, 168, 4888 |
| AspS9I | GGNCC | 4 cut(s) | 3139, 3278, 3459, 3460 |
| AsuC2I | CCSGG | 3 cut(s) | 3066, 3660, 4904 |
| AvaI | CYCGRG | 1 cut(s) | 4541 |
| AvaII | GGWCC | 1 cut(s) | 3278 |
| BaeGI | GKGCMC | 3 cut(s) | 736, 1526, 3463 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 4029, 4062 |
| BalI | TGGCCA | 3 cut(s) | 1495, 1791, 4184 |
| BanI | GGYRCC | 2 cut(s) | 23, 2130 |
| BanII | GRGCYC | 3 cut(s) | 2040, 3463, 4760 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2967, 2999 |
| BauI | CACGAG | 2 cut(s) | 2866, 4353 |
| BbsI | GAAGAC | 2 cut(s) | 1748, 4098 |
| Bbv12I | GWGCWC | 3 cut(s) | 736, 1526, 2040 |
| BbvI | GCAGC | 8 cut(s) | 2137, 4135, 4372, 4387, 4390, 4614, 4726, 4836 |
| BceAI | ACGGC | 1 cut(s) | 3073 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 3490, 3524 |
| BciT130I | CCWGG | 2 cut(s) | 3082, 3540 |
| BciVI | GTATCC | 1 cut(s) | 1562 |
| BclI | TGATCA | 3 cut(s) | 1375, 3772, 4147 |
| BcnI | CCSGG | 3 cut(s) | 3066, 3660, 4904 |
| BcoDI | GTCTC | 4 cut(s) | 594, 710, 1099, 2843 |
| BfmI | CTRYAG | 6 cut(s) | 996, 1721, 2853, 2918, 3956, 4407 |
| BfrI | CTTAAG | 2 cut(s) | 1196, 1352 |
| BfuAI | ACCTGC | 2 cut(s) | 953, 991 |
| BfuI | GTATCC | 1 cut(s) | 1562 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 4517 |
| BglII | AGATCT | 3 cut(s) | 264, 694, 2608 |
| BisI | GCNGC | 8 cut(s) | 2151, 4124, 4361, 4401, 4404, 4628, 4740, 4850 |
| BlpI | GCTNAGC | 2 cut(s) | 1814, 2057 |
| BlsI | GCNGC | 8 cut(s) | 2152, 4125, 4362, 4402, 4405, 4629, 4741, 4851 |
| BmcAI | AGTACT | 3 cut(s) | 327, 406, 3648 |
| Bme1390I | CCNGG | 5 cut(s) | 3066, 3082, 3540, 3660, 4904 |
| Bme18I | GGWCC | 1 cut(s) | 3278 |
| BmeT110I | CYCGRG | 1 cut(s) | 4541 |
| BmgBI | CACGTC | 1 cut(s) | 737 |
| BmgT120I | GGNCC | 4 cut(s) | 3139, 3278, 3459, 3460 |
| BmiI | GGNNCC | 9 cut(s) | 25, 366, 1999, 2132, 2708, 3460, 3461, 4392, 4801 |
| BmrFI | CCNGG | 5 cut(s) | 3066, 3082, 3540, 3660, 4904 |
| BmrI | ACTGGG | 4 cut(s) | 2170, 3281, 3375, 4217 |
| BmuI | ACTGGG | 4 cut(s) | 2170, 3281, 3375, 4217 |
| BoxI | GACNNNNGTC | 2 cut(s) | 233, 2939 |
| BpiI | GAAGAC | 2 cut(s) | 1748, 4098 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1610, 1642, 3382, 3414 |
| BpmI | CTGGAG | 1 cut(s) | 618 |
| Bpu10I | CCTNAGC | 3 cut(s) | 4752, 4804, 5021 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 1814, 2057 |
| BpuEI | CTTGAG | 6 cut(s) | 1364, 2024, 3374, 4504, 4901, 5013 |
| BpuMI | CCSGG | 3 cut(s) | 3066, 3660, 4904 |
| Bsa29I | ATCGAT | 1 cut(s) | 1759 |
| BsaBI | GATNNNNATC | 1 cut(s) | 4335 |
| BsaHI | GRCGYC | 1 cut(s) | 73 |
| BsaJI | CCNNGG | 9 cut(s) | 2469, 2523, 2661, 2722, 2937, 4386, 4542, 4918, 4953 |
| BsaWI | WCCGGW | 1 cut(s) | 26 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1159, 1189, 4399, 4429 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 493, 1678, 1987, 3051, 3886, 4735 |
| Bse118I | RCCGGY | 2 cut(s) | 1033, 3804 |
| Bse3DI | GCAATG | 4 cut(s) | 1583, 2230, 2371, 4629 |
| Bse8I | GATNNNNATC | 1 cut(s) | 4335 |
| BseBI | CCWGG | 2 cut(s) | 3082, 3540 |
| BseCI | ATCGAT | 1 cut(s) | 1759 |
| BseDI | CCNNGG | 9 cut(s) | 2469, 2523, 2661, 2722, 2937, 4386, 4542, 4918, 4953 |
| BseJI | GATNNNNATC | 1 cut(s) | 4335 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 493, 1678, 1987, 3051, 3886, 4735 |
| BseMI | GCAATG | 4 cut(s) | 1583, 2230, 2371, 4629 |
| BseRI | GAGGAG | 4 cut(s) | 4434, 4559, 4562, 4778 |
| BseSI | GKGCMC | 3 cut(s) | 736, 1526, 3463 |
| BseXI | GCAGC | 8 cut(s) | 2137, 4135, 4372, 4387, 4390, 4614, 4726, 4836 |
| BsgI | GTGCAG | 2 cut(s) | 4142, 4419 |
| Bsh1236I | CGCG | 1 cut(s) | 4888 |
| BshFI | GGCC | 9 cut(s) | 1495, 1791, 3088, 3140, 3461, 3543, 4184, 4293, 4556 |
| BshNI | GGYRCC | 2 cut(s) | 23, 2130 |
| BshVI | ATCGAT | 1 cut(s) | 1759 |
| BsiHKAI | GWGCWC | 3 cut(s) | 736, 1526, 2040 |
| BsiHKCI | CYCGRG | 1 cut(s) | 4541 |
| BsiSI | CCGG | 6 cut(s) | 27, 1034, 3066, 3659, 3805, 4903 |
| BslFI | GGGAC | 4 cut(s) | 834, 3076, 3272, 4483 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 493, 1678, 1987, 3051, 3886, 4735 |
| BsmAI | GTCTC | 4 cut(s) | 594, 710, 1099, 2843 |
| BsmBI | CGTCTC | 1 cut(s) | 1099 |
| BsmFI | GGGAC | 4 cut(s) | 834, 3076, 3272, 4483 |
| BsmI | GAATGC | 5 cut(s) | 870, 1328, 2734, 3075, 4283 |
| BsnI | GGCC | 9 cut(s) | 1495, 1791, 3088, 3140, 3461, 3543, 4184, 4293, 4556 |
| BsoBI | CYCGRG | 1 cut(s) | 4541 |
| Bsp120I | GGGCCC | 1 cut(s) | 3459 |
| Bsp1286I | GDGCHC | 5 cut(s) | 736, 1526, 2040, 3463, 4760 |
| Bsp1407I | TGTACA | 1 cut(s) | 2485 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 1814, 2057 |
| Bsp19I | CCATGG | 2 cut(s) | 2469, 2523 |
| BspANI | GGCC | 9 cut(s) | 1495, 1791, 3088, 3140, 3461, 3543, 4184, 4293, 4556 |
| BspDI | ATCGAT | 1 cut(s) | 1759 |
| BspFNI | CGCG | 1 cut(s) | 4888 |
| BspHI | TCATGA | 4 cut(s) | 514, 706, 3775, 3900 |
| BspLI | GGNNCC | 9 cut(s) | 25, 366, 1999, 2132, 2708, 3460, 3461, 4392, 4801 |
| BspMAI | CTGCAG | 1 cut(s) | 2922 |
| BspMI | ACCTGC | 2 cut(s) | 953, 991 |
| BspPI | GGATC | 3 cut(s) | 132, 4376, 4965 |
| BspQI | GCTCTTC | 1 cut(s) | 4857 |
| BspT107I | GGYRCC | 2 cut(s) | 23, 2130 |
| BspTI | CTTAAG | 2 cut(s) | 1196, 1352 |
| BsrBI | CCGCTC | 1 cut(s) | 2865 |
| BsrDI | GCAATG | 4 cut(s) | 1583, 2230, 2371, 4629 |
| BsrFI | RCCGGY | 2 cut(s) | 1033, 3804 |
| BsrGI | TGTACA | 1 cut(s) | 2485 |
| BssAI | RCCGGY | 2 cut(s) | 1033, 3804 |
| BssECI | CCNNGG | 9 cut(s) | 2469, 2523, 2661, 2722, 2937, 4386, 4542, 4918, 4953 |
| BssNI | GRCGYC | 1 cut(s) | 73 |
| BssSI | CACGAG | 2 cut(s) | 2866, 4353 |
| BssT1I | CCWWGG | 7 cut(s) | 2469, 2523, 2661, 2722, 4386, 4918, 4953 |
| Bst2BI | CACGAG | 2 cut(s) | 2866, 4353 |
| Bst2UI | CCWGG | 2 cut(s) | 3082, 3540 |
| Bst4CI | ACNGT | 9 cut(s) | 58, 997, 1051, 1725, 2854, 2938, 3170, 3734, 4644 |
| Bst6I | CTCTTC | 4 cut(s) | 2523, 2707, 2762, 4857 |
| BstACI | GRCGYC | 1 cut(s) | 73 |
| BstAFI | CTTAAG | 2 cut(s) | 1196, 1352 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2926 |
| BstAUI | TGTACA | 1 cut(s) | 2485 |
| BstC8I | GCNNGC | 8 cut(s) | 591, 2026, 3075, 3497, 4538, 4854, 4890, 5078 |
| BstDSI | CCRYGG | 3 cut(s) | 2469, 2523, 2937 |
| BstFNI | CGCG | 1 cut(s) | 4888 |
| BstHHI | GCGC | 3 cut(s) | 64, 168, 4888 |
| BstMAI | GTCTC | 4 cut(s) | 594, 710, 1099, 2843 |
| BstNI | CCWGG | 2 cut(s) | 3082, 3540 |
| BstNSI | RCATGY | 7 cut(s) | 1088, 1457, 1768, 3077, 3256, 3499, 4121 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 233, 2939 |
| BstSCI | CCNGG | 5 cut(s) | 3064, 3080, 3538, 3658, 4902 |
| BstSFI | CTRYAG | 6 cut(s) | 996, 1721, 2853, 2918, 3956, 4407 |
| BstSLI | GKGCMC | 3 cut(s) | 736, 1526, 3463 |
| BstUI | CGCG | 1 cut(s) | 4888 |
| BstV1I | GCAGC | 8 cut(s) | 2137, 4135, 4372, 4387, 4390, 4614, 4726, 4836 |
| BstV2I | GAAGAC | 2 cut(s) | 1748, 4098 |
| BstX2I | RGATCY | 3 cut(s) | 264, 694, 2608 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 2122, 4192 |
| BstYI | RGATCY | 3 cut(s) | 264, 694, 2608 |
| Bsu15I | ATCGAT | 1 cut(s) | 1759 |
| BsuI | GTATCC | 1 cut(s) | 1562 |
| BsuRI | GGCC | 9 cut(s) | 1495, 1791, 3088, 3140, 3461, 3543, 4184, 4293, 4556 |
| BsuTUI | ATCGAT | 1 cut(s) | 1759 |
| BtgI | CCRYGG | 3 cut(s) | 2469, 2523, 2937 |
| BtrI | CACGTC | 1 cut(s) | 737 |
| BtsI | GCAGTG | 4 cut(s) | 1337, 3439, 4137, 4436 |
| BtsIMutI | CAGTG | 9 cut(s) | 1047, 1337, 2189, 3388, 3439, 4137, 4173, 4436, 4697 |
| BveI | ACCTGC | 2 cut(s) | 953, 991 |
| Cac8I | GCNNGC | 8 cut(s) | 591, 2026, 3075, 3497, 4538, 4854, 4890, 5078 |
| CaiI | CAGNNNCTG | 3 cut(s) | 2344, 2631, 4403 |
| CciI | TCATGA | 4 cut(s) | 514, 706, 3775, 3900 |
| CfoI | GCGC | 3 cut(s) | 64, 168, 4888 |
| Cfr10I | RCCGGY | 2 cut(s) | 1033, 3804 |
| Cfr13I | GGNCC | 4 cut(s) | 3139, 3278, 3459, 3460 |
| ClaI | ATCGAT | 1 cut(s) | 1759 |
| CseI | GACGC | 3 cut(s) | 81, 4103, 4938 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1003, 1038, 3415, 3450 |
| DraI | TTTAAA | 5 cut(s) | 1294, 1486, 1654, 1837, 2247 |
| DraIII | CACNNNGTG | 1 cut(s) | 1925 |
| EaeI | YGGCCR | 4 cut(s) | 1493, 1789, 3086, 4182 |
| Eam1104I | CTCTTC | 4 cut(s) | 2523, 2707, 2762, 4857 |
| EarI | CTCTTC | 4 cut(s) | 2523, 2707, 2762, 4857 |
| EciI | GGCGGA | 1 cut(s) | 5063 |
| Ecl136II | GAGCTC | 1 cut(s) | 2038 |
| Eco130I | CCWWGG | 7 cut(s) | 2469, 2523, 2661, 2722, 4386, 4918, 4953 |
| Eco24I | GRGCYC | 3 cut(s) | 2040, 3463, 4760 |
| Eco32I | GATATC | 2 cut(s) | 2508, 3618 |
| Eco47I | GGWCC | 1 cut(s) | 3278 |
| Eco53kI | GAGCTC | 1 cut(s) | 2038 |
| Eco57I | CTGAAG | 9 cut(s) | 459, 1587, 1760, 2486, 4115, 4284, 4335, 4380, 4830 |
| Eco88I | CYCGRG | 1 cut(s) | 4541 |
| EcoICRI | GAGCTC | 1 cut(s) | 2038 |
| EcoO109I | RGGNCCY | 2 cut(s) | 3459, 3460 |
| EcoRI | GAATTC | 1 cut(s) | 666 |
| EcoRII | CCWGG | 2 cut(s) | 3080, 3538 |
| EcoRV | GATATC | 2 cut(s) | 2508, 3618 |
| EcoT14I | CCWWGG | 7 cut(s) | 2469, 2523, 2661, 2722, 4386, 4918, 4953 |
| EcoT38I | GRGCYC | 3 cut(s) | 2040, 3463, 4760 |
| ErhI | CCWWGG | 7 cut(s) | 2469, 2523, 2661, 2722, 4386, 4918, 4953 |
| Esp3I | CGTCTC | 1 cut(s) | 1099 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1136, 1168, 5004, 5036 |
| FaqI | GGGAC | 4 cut(s) | 834, 3076, 3272, 4483 |
| FauI | CCCGC | 2 cut(s) | 3249, 3474 |
| FauNDI | CATATG | 1 cut(s) | 2565 |
| FbaI | TGATCA | 3 cut(s) | 1375, 3772, 4147 |
| FblI | GTMKAC | 5 cut(s) | 1366, 1873, 2856, 2914, 4029 |
| Fnu4HI | GCNGC | 8 cut(s) | 2151, 4124, 4361, 4401, 4404, 4628, 4740, 4850 |
| FriOI | GRGCYC | 3 cut(s) | 2040, 3463, 4760 |
| Fsp4HI | GCNGC | 8 cut(s) | 2151, 4124, 4361, 4401, 4404, 4628, 4740, 4850 |
| GlaI | GCGC | 3 cut(s) | 63, 167, 4887 |
| GluI | GCNGC | 8 cut(s) | 2151, 4124, 4361, 4401, 4404, 4628, 4740, 4850 |
| GsuI | CTGGAG | 1 cut(s) | 618 |
| HaeIII | GGCC | 9 cut(s) | 1495, 1791, 3088, 3140, 3461, 3543, 4184, 4293, 4556 |
| HapII | CCGG | 6 cut(s) | 27, 1034, 3066, 3659, 3805, 4903 |
| HgaI | GACGC | 3 cut(s) | 81, 4103, 4938 |
| HhaI | GCGC | 3 cut(s) | 64, 168, 4888 |
| Hin1I | GRCGYC | 1 cut(s) | 73 |
| Hin6I | GCGC | 3 cut(s) | 62, 166, 4886 |
| HinP1I | GCGC | 3 cut(s) | 62, 166, 4886 |
| HincII | GTYRAC | 4 cut(s) | 217, 2790, 3979, 4030 |
| HindII | GTYRAC | 4 cut(s) | 217, 2790, 3979, 4030 |
| HindIII | AAGCTT | 5 cut(s) | 1559, 2761, 3099, 3154, 4877 |
| HpaII | CCGG | 6 cut(s) | 27, 1034, 3066, 3659, 3805, 4903 |
| Hpy99I | CGWCG | 1 cut(s) | 741 |
| HpyCH4III | ACNGT | 9 cut(s) | 58, 997, 1051, 1725, 2854, 2938, 3170, 3734, 4644 |
| HpyCH4IV | ACGT | 7 cut(s) | 108, 192, 736, 1108, 1432, 3943, 3987 |
| HpySE526I | ACGT | 7 cut(s) | 108, 192, 736, 1108, 1432, 3943, 3987 |
| Hsp92I | GRCGYC | 1 cut(s) | 73 |
| HspAI | GCGC | 3 cut(s) | 62, 166, 4886 |
| KpnI | GGTACC | 2 cut(s) | 27, 2134 |
| Ksp22I | TGATCA | 3 cut(s) | 1375, 3772, 4147 |
| LguI | GCTCTTC | 1 cut(s) | 4857 |
| LmnI | GCTCC | 5 cut(s) | 1997, 2599, 3403, 4243, 4390 |
| Lsp1109I | GCAGC | 8 cut(s) | 2137, 4135, 4372, 4387, 4390, 4614, 4726, 4836 |
| MaeII | ACGT | 7 cut(s) | 108, 192, 736, 1108, 1432, 3943, 3987 |
| MbiI | CCGCTC | 1 cut(s) | 2865 |
| MfeI | CAATTG | 1 cut(s) | 1862 |
| MflI | RGATCY | 3 cut(s) | 264, 694, 2608 |
| MhlI | GDGCHC | 5 cut(s) | 736, 1526, 2040, 3463, 4760 |
| MlsI | TGGCCA | 3 cut(s) | 1495, 1791, 4184 |
| MluNI | TGGCCA | 3 cut(s) | 1495, 1791, 4184 |
| MlyI | GAGTC | 6 cut(s) | 160, 763, 3182, 4241, 4786, 5020 |
| MmeI | TCCRAC | 9 cut(s) | 16, 49, 326, 731, 1659, 2123, 3215, 4442, 4663 |
| Mox20I | TGGCCA | 3 cut(s) | 1495, 1791, 4184 |
| MroXI | GAANNNNTTC | 3 cut(s) | 947, 2334, 3315 |
| MscI | TGGCCA | 3 cut(s) | 1495, 1791, 4184 |
| MslI | CAYNNNNRTG | 4 cut(s) | 711, 2283, 2355, 3936 |
| Msp20I | TGGCCA | 3 cut(s) | 1495, 1791, 4184 |
| MspA1I | CMGCKG | 2 cut(s) | 1906, 4400 |
| MspCI | CTTAAG | 2 cut(s) | 1196, 1352 |
| MspI | CCGG | 6 cut(s) | 27, 1034, 3066, 3659, 3805, 4903 |
| MspR9I | CCNGG | 5 cut(s) | 3066, 3082, 3540, 3660, 4904 |
| MunI | CAATTG | 1 cut(s) | 1862 |
| Mva1269I | GAATGC | 5 cut(s) | 870, 1328, 2734, 3075, 4283 |
| MvaI | CCWGG | 2 cut(s) | 3082, 3540 |
| MvnI | CGCG | 1 cut(s) | 4888 |
| NciI | CCSGG | 3 cut(s) | 3066, 3660, 4904 |
| NcoI | CCATGG | 2 cut(s) | 2469, 2523 |
| NdeI | CATATG | 1 cut(s) | 2565 |
| NlaIV | GGNNCC | 9 cut(s) | 25, 366, 1999, 2132, 2708, 3460, 3461, 4392, 4801 |
| NmeAIII | GCCGAG | 1 cut(s) | 565 |
| NmuCI | GTSAC | 6 cut(s) | 1045, 2432, 2800, 4204, 4778, 5062 |
| NspI | RCATGY | 7 cut(s) | 1088, 1457, 1768, 3077, 3256, 3499, 4121 |
| PaeI | GCATGC | 2 cut(s) | 3077, 3499 |
| PagI | TCATGA | 4 cut(s) | 514, 706, 3775, 3900 |
| PaqCI | CACCTGC | 1 cut(s) | 953 |
| PciI | ACATGT | 2 cut(s) | 1453, 4117 |
| PciSI | GCTCTTC | 1 cut(s) | 4857 |
| PctI | GAATGC | 5 cut(s) | 870, 1328, 2734, 3075, 4283 |
| PdmI | GAANNNNTTC | 3 cut(s) | 947, 2334, 3315 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 493, 1678, 4735 |
| PfoI | TCCNGGA | 2 cut(s) | 3064, 3658 |
| PkrI | GCNGC | 8 cut(s) | 2152, 4125, 4362, 4402, 4405, 4629, 4741, 4851 |
| PleI | GAGTC | 6 cut(s) | 159, 763, 3181, 4240, 4785, 5020 |
| PpsI | GAGTC | 6 cut(s) | 159, 763, 3181, 4240, 4785, 5020 |
| PscI | ACATGT | 2 cut(s) | 1453, 4117 |
| PshAI | GACNNNNGTC | 2 cut(s) | 233, 2939 |
| PshBI | ATTAAT | 1 cut(s) | 2388 |
| Psp124BI | GAGCTC | 1 cut(s) | 2040 |
| Psp1406I | AACGTT | 1 cut(s) | 108 |
| Psp6I | CCWGG | 2 cut(s) | 3080, 3538 |
| PspGI | CCWGG | 2 cut(s) | 3080, 3538 |
| PspN4I | GGNNCC | 9 cut(s) | 25, 366, 1999, 2132, 2708, 3460, 3461, 4392, 4801 |
| PspOMI | GGGCCC | 1 cut(s) | 3459 |
| PspPI | GGNCC | 4 cut(s) | 3139, 3278, 3459, 3460 |
| PstI | CTGCAG | 1 cut(s) | 2922 |
| PstNI | CAGNNNCTG | 3 cut(s) | 2344, 2631, 4403 |
| PsuI | RGATCY | 3 cut(s) | 264, 694, 2608 |
| PvuII | CAGCTG | 2 cut(s) | 1906, 4400 |
| RseI | CAYNNNNRTG | 4 cut(s) | 711, 2283, 2355, 3936 |
| SacI | GAGCTC | 1 cut(s) | 2040 |
| SalI | GTCGAC | 1 cut(s) | 4028 |
| SapI | GCTCTTC | 1 cut(s) | 4857 |
| SatI | GCNGC | 8 cut(s) | 2151, 4124, 4361, 4401, 4404, 4628, 4740, 4850 |
| Sau96I | GGNCC | 4 cut(s) | 3139, 3278, 3459, 3460 |
| ScaI | AGTACT | 3 cut(s) | 327, 406, 3648 |
| SchI | GAGTC | 6 cut(s) | 160, 763, 3182, 4241, 4786, 5020 |
| ScrFI | CCNGG | 5 cut(s) | 3066, 3082, 3540, 3660, 4904 |
| SduI | GDGCHC | 5 cut(s) | 736, 1526, 2040, 3463, 4760 |
| SfcI | CTRYAG | 6 cut(s) | 996, 1721, 2853, 2918, 3956, 4407 |
| SinI | GGWCC | 1 cut(s) | 3278 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 711, 2283, 2355, 3936 |
| SmlI | CTYRAG | 8 cut(s) | 1196, 1343, 1352, 2039, 3353, 4483, 4880, 5028 |
| SmoI | CTYRAG | 8 cut(s) | 1196, 1343, 1352, 2039, 3353, 4483, 4880, 5028 |
| SphI | GCATGC | 2 cut(s) | 3077, 3499 |
| SspI | AATATT | 1 cut(s) | 780 |
| SstI | GAGCTC | 1 cut(s) | 2040 |
| StyD4I | CCNGG | 5 cut(s) | 3064, 3080, 3538, 3658, 4902 |
| StyI | CCWWGG | 7 cut(s) | 2469, 2523, 2661, 2722, 4386, 4918, 4953 |
| TaaI | ACNGT | 9 cut(s) | 58, 997, 1051, 1725, 2854, 2938, 3170, 3734, 4644 |
| TaiI | ACGT | 7 cut(s) | 111, 195, 739, 1111, 1435, 3946, 3990 |
| TaqI | TCGA | 8 cut(s) | 951, 1442, 1759, 2447, 3372, 4029, 4230, 4688 |
| TatI | WGTACW | 5 cut(s) | 325, 404, 499, 2485, 3646 |
| TscAI | CASTG | 9 cut(s) | 1054, 1344, 2196, 3388, 3439, 4144, 4173, 4443, 4704 |
| TseFI | GTSAC | 6 cut(s) | 1045, 2432, 2800, 4204, 4778, 5062 |
| TseI | GCWGC | 8 cut(s) | 2150, 4123, 4360, 4400, 4403, 4627, 4739, 4849 |
| Tsp45I | GTSAC | 6 cut(s) | 1045, 2432, 2800, 4204, 4778, 5062 |
| TspGWI | ACGGA | 1 cut(s) | 3998 |
| TspRI | CASTG | 9 cut(s) | 1054, 1344, 2196, 3388, 3439, 4144, 4173, 4443, 4704 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 493, 1678, 4735 |
| Vha464I | CTTAAG | 2 cut(s) | 1196, 1352 |
| VneI | GTGCAC | 2 cut(s) | 732, 1522 |
| VpaK11BI | GGWCC | 1 cut(s) | 3278 |
| VspI | ATTAAT | 1 cut(s) | 2388 |
| XapI | RAATTY | 8 cut(s) | 666, 943, 3029, 3311, 3359, 3547, 3637, 3875 |
| XbaI | TCTAGA | 2 cut(s) | 2827, 2845 |
| XceI | RCATGY | 7 cut(s) | 1088, 1457, 1768, 3077, 3256, 3499, 4121 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2141 |
| XmiI | GTMKAC | 5 cut(s) | 1366, 1873, 2856, 2914, 4029 |
| XmnI | GAANNNNTTC | 3 cut(s) | 947, 2334, 3315 |
| ZrmI | AGTACT | 3 cut(s) | 327, 406, 3648 |