Rmu_sc0001196.1_g000013

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001196.1
OG0000042
Physical Location & Seq
Forward (+)
79196 .. 82551
3356 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001196.1_g000013.1.cds

Sequence Viewer

Length: 2865 bp
atgcaatgcccagctctaagaatgtttctgttggagggtaattctaaaccgctggcaccactggcaccgctggcaatatcccctagattatttgaagagatgaaacaactcaatgttttgagttggataaacatgaacataggggctctacctcaatctcttcggttcctagagaatcttcagacactgtgtttaataggatgcacattggaagacatatctctcgttgggcagttaagaaacttagaaattctaagttttgaaggttctgatgttcaacatctgccccaagaaatagggcaactggctcatctgcggttgttggatctatccaactgctatagacttgaagtgatctcgcctggcgttatatcaagcttgacaagactggaatacttgacaatgagagaaagctttaacaattgggtgactgaaggtgaaagaagcaacgctagcctatcagagctggagcatttgtctcatttaactacattagaaatacatgttcccgatgcagaccttcttccagcaaaccttttctcccttaagctagaaagatttcaaatcatgattggtgaaacatgggcgtgggacgagcatgaacatgcacgtgaggatgaggatgaggatgaggatgaggatgaggatgacaatgacgatgaagatgaagatgaagatgaagatgacgatgacgatgacgatgacgatgacgatgaggaggaggaggaagaggaggaagaagaggaagaggatcaggaggattataagcactccctcaacagactgaaactccagctcactacaaacattgagttgaaccaaggtctaagaaagttgctgaagatatgccatgatttgtccctgtatgggacagagagtgttaatcatattgtccaccaatttgataatgaagaatttcagcaactgaagcatctctgtgtccgaaacaatgtcgactttatcattaccaagaaggttatgttgccgaacttaaagactttggtgatacatgagtatgatgatataagattcctgttcaccttttctgtggctagaagtcttgtacaactcaaatgtttgaagatttcgtcatgtaaactgttggaagagattgtatcatcgacaagagaatgcgatgaagaaagtatgggtaaaatgtttcccaatctggaagttttgaatctaaagggactcgaaaagctggctagattttgcatgggaagttatgttgaatttccgtccttgaaagaattggatgtagatgattgtcctgaactgggggctttcatttgtgataatgttgatacgagtacgagcagtcgagggattataatcgacaaagaaactcatgagagagactcgaaacaagaaaagaaccttgatgttaacagtgagacttttgtacggtccttcctctttgacgaaaaggtaggatttccttgcttggagaatttgaaaatcaatggggtcctgaagttgaagacaatatggcacagccaacaagctcaagactctttttggacactcaacaacgttaaagtttccaaatgcgacgcattaatcaatgtcattacgcctgctgtcatgggaagattgaatgctctgaaaagcatagatataaagaattgcaggtcgctggaagtggtttttgaacttggaggaagtaatgcacacttccaaaatcttgtttttgtatccgtatggcgttgtaacagattgaagaatatttttccagcctcagtggccagaagtctccaacaactaagttggctgagtctgggtttttgtcatggagtggaggaaatcgtcggtgaggaagagggagtactagaaacaccgtcgtctccgcagtttgtgttcccaaaagtaacattcatagagtttgaaaccttgtccagtctcaggagcttttatccaagaatgcatacttcagagtggccattactccaaactttgacggtctgtgactgtaagggagtaaagactttggcggcccaactttcattcttgcgggaaaaatacgagcaggaccctcttatgtctccacaatctctctttctagctgacaaggattcattcatcaacctagaacacttggaattagatgccatggaaatttggaatggtccaaccccagcagagttggtctttggcaaattaaattcatttgctttcgtaaattgtgtacctttctccaagcaagtatcagttctcttccttcagaaactacaaaatcttgaaaaacttcaagttgggtgggattcttccgaagaaatatttgtggatgaaggaattacaaatagtggggagataagtgcagctgggagtagaactctaccacgtgtaagagttttgaaggtcacggaaatgaaaaatttgatgcatctagggaaggagaactcccaatcagacccactttttccgaacttggaaattcttgaagtgtcgatgtgcagaagtctgaagagtctacagtcatcagctatatcgttccggaatctaacaagtttgacagtaatgaagtgtgggagattgaattatttagtatcattttcggtggctcaaagcttaacgcaactcacaaaactgaaagtgaagaaatgtaaaagaatggtagtaatagtggccagcaatgtcggagatgatgatgaagcagaaaatgagattgctttcagccggttgcaagaattggaaatttctgatctaccaagtctgcaaggcttctgctcctccagaaattatgcagtcaacttctcatccttagtgactttgaggattaaccaagtgccgggattgaagcagttctccgaagcattgcagttgctgatctgcatccgcacatgcaggcacgcaacactggcctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

954

Amino Acids

108.55

Weight (kDa)

4.7

Isoelectric Point (pI)

50.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 765, 1331
Acc36I ACCTGC 1 cut(s) 1620
AccB1I GGYRCC 2 cut(s) 55, 64
AccI GTMKAC 2 cut(s) 954, 2470
AccIII TCCGGA 1 cut(s) 2493
AciI CCGC 7 cut(s) 50, 68, 316, 1847, 1991, 2011, 2836
AclI AACGTT 1 cut(s) 1533
AclWI GGATC 2 cut(s) 333, 759
AcoI YGGCCR 3 cut(s) 1743, 1937, 2625
AcsI RAATTY 9 cut(s) 249, 914, 1232, 1450, 2115, 2161, 2374, 2433, 2694
AcuI CTGAAG 8 cut(s) 164, 453, 860, 947, 1493, 1914, 2204, 2483
AcvI CACGTG 2 cut(s) 611, 2342
AfaI GTAC 5 cut(s) 1065, 1312, 1404, 1827, 2187
AfiI CCNNNNNNNGG 4 cut(s) 867, 1277, 1902, 2788
AflII CTTAAG 1 cut(s) 545
AflIII ACRYGT 2 cut(s) 502, 2341
AjnI CCWGG 1 cut(s) 361
Alw26I GTCTC 7 cut(s) 483, 1350, 1388, 1757, 1848, 1904, 2046
AlwI GGATC 2 cut(s) 333, 759
AlwNI CAGNNNCTG 3 cut(s) 187, 925, 2824
Aor13HI TCCGGA 1 cut(s) 2493
AoxI GGCC 5 cut(s) 1743, 1937, 1992, 2625, 2859
ApeKI GCWGC 1 cut(s) 2318
ApoI RAATTY 9 cut(s) 249, 914, 1232, 1450, 2115, 2161, 2374, 2433, 2694
AseI ATTAAT 1 cut(s) 1559
Asp700I GAANNNNTTC 4 cut(s) 558, 915, 2244, 2801
AspS9I GGNCC 5 cut(s) 1407, 1468, 1993, 2029, 2126
AsuC2I CCSGG 1 cut(s) 2790
AsuHPI GGTGA 6 cut(s) 439, 449, 587, 1015, 1030, 1823
AsuNHI GCTAGC 1 cut(s) 452
AvaII GGWCC 4 cut(s) 1407, 1468, 2029, 2126
BaeI ACNNNNGTAYC 2 cut(s) 998, 1031
BalI TGGCCA 3 cut(s) 1745, 1939, 2627
BanI GGYRCC 2 cut(s) 55, 64
BanII GRGCYC 1 cut(s) 148
BarI GAAGNNNNNNTAC 2 cut(s) 1809, 1841
BbrPI CACGTG 2 cut(s) 611, 2342
BbsI GAAGAC 2 cut(s) 219, 1487
BbvI GCAGC 1 cut(s) 2330
BciT130I CCWGG 1 cut(s) 363
BciVI GTATCC 1 cut(s) 1705
BcnI CCSGG 1 cut(s) 2790
BcoDI GTCTC 7 cut(s) 483, 1350, 1388, 1757, 1848, 1904, 2046
BfmI CTRYAG 2 cut(s) 340, 2471
BfrI CTTAAG 1 cut(s) 545
BfuAI ACCTGC 1 cut(s) 1620
BfuI GTATCC 1 cut(s) 1705
BglI GCCNNNNNGGC 1 cut(s) 1742
BisI GCNGC 2 cut(s) 1992, 2319
BlsI GCNGC 2 cut(s) 1993, 2320
BmcAI AGTACT 1 cut(s) 1827
Bme1390I CCNGG 2 cut(s) 363, 2790
Bme18I GGWCC 4 cut(s) 1407, 1468, 2029, 2126
BmgT120I GGNCC 5 cut(s) 1407, 1468, 1993, 2029, 2126
BmiI GGNNCC 5 cut(s) 57, 66, 167, 1469, 2031
BmrFI CCNGG 2 cut(s) 363, 2790
BmrI ACTGGG 1 cut(s) 1286
BmsI GCATC 7 cut(s) 191, 502, 940, 2095, 2370, 2392, 2841
BmtI GCTAGC 1 cut(s) 456
BmuI ACTGGG 1 cut(s) 1286
BpiI GAAGAC 2 cut(s) 219, 1487
BplI GAGNNNNNCTC 4 cut(s) 1343, 1375, 2317, 2349
BpmI CTGGAG 3 cut(s) 488, 776, 2716
BpuEI CTTGAG 1 cut(s) 1491
BpuMI CCSGG 1 cut(s) 2790
BsaAI YACGTR 2 cut(s) 611, 2342
BsaBI GATNNNNATC 2 cut(s) 1331, 2831
BsaJI CCNNGG 2 cut(s) 820, 2109
BsaWI WCCGGW 1 cut(s) 2493
BsaXI ACNNNNNCTCC 6 cut(s) 461, 491, 524, 554, 774, 804
Bsc4I CCNNNNNNNGG 4 cut(s) 867, 1277, 1902, 2788
Bse118I RCCGGY 1 cut(s) 2676
Bse1I ACTGG 6 cut(s) 66, 309, 393, 1281, 1896, 2862
Bse3DI GCAATG 3 cut(s) 11, 2638, 2813
Bse8I GATNNNNATC 2 cut(s) 1331, 2831
BseAI TCCGGA 1 cut(s) 2493
BseBI CCWGG 1 cut(s) 363
BseDI CCNNGG 2 cut(s) 820, 2109
BseJI GATNNNNATC 2 cut(s) 1331, 2831
BseLI CCNNNNNNNGG 4 cut(s) 867, 1277, 1902, 2788
BseMI GCAATG 3 cut(s) 11, 2638, 2813
BseMII CTCAG 3 cut(s) 1752, 1763, 1915
BseNI ACTGG 6 cut(s) 66, 309, 393, 1281, 1896, 2862
BseRI GAGGAG 5 cut(s) 731, 734, 737, 746, 2719
BseXI GCAGC 1 cut(s) 2330
BseYI CCCAGC 3 cut(s) 10, 2134, 2321
BsgI GTGCAG 2 cut(s) 2337, 2473
BshFI GGCC 5 cut(s) 1745, 1939, 1994, 2627, 2861
BshNI GGYRCC 2 cut(s) 55, 64
BsiSI CCGG 3 cut(s) 2494, 2677, 2789
BslFI GGGAC 4 cut(s) 605, 844, 883, 1203
BslI CCNNNNNNNGG 4 cut(s) 867, 1277, 1902, 2788
BsmAI GTCTC 7 cut(s) 483, 1350, 1388, 1757, 1848, 1904, 2046
BsmBI CGTCTC 1 cut(s) 1848
BsmFI GGGAC 4 cut(s) 605, 844, 883, 1203
BsmI GAATGC 3 cut(s) 1136, 1603, 1926
BsnI GGCC 5 cut(s) 1745, 1939, 1994, 2627, 2861
Bsp1286I GDGCHC 1 cut(s) 148
Bsp13I TCCGGA 1 cut(s) 2493
Bsp1407I TGTACA 1 cut(s) 1063
Bsp143I GATC 5 cut(s) 325, 354, 751, 2701, 2826
Bsp19I CCATGG 1 cut(s) 2109
BspACI CCGC 7 cut(s) 50, 68, 316, 1847, 1991, 2011, 2836
BspANI GGCC 5 cut(s) 1745, 1939, 1994, 2627, 2861
BspCNI CTCAG 3 cut(s) 1751, 1764, 1914
BspEI TCCGGA 1 cut(s) 2493
BspHI TCATGA 2 cut(s) 567, 1348
BspLI GGNNCC 5 cut(s) 57, 66, 167, 1469, 2031
BspMI ACCTGC 1 cut(s) 1620
BspOI GCTAGC 1 cut(s) 456
BspPI GGATC 2 cut(s) 333, 759
BspT107I GGYRCC 2 cut(s) 55, 64
BspTI CTTAAG 1 cut(s) 545
BsrDI GCAATG 3 cut(s) 11, 2638, 2813
BsrFI RCCGGY 1 cut(s) 2676
BsrGI TGTACA 1 cut(s) 1063
BsrI ACTGG 6 cut(s) 66, 309, 393, 1281, 1896, 2862
BssAI RCCGGY 1 cut(s) 2676
BssECI CCNNGG 2 cut(s) 820, 2109
BssMI GATC 5 cut(s) 325, 354, 751, 2701, 2826
BssT1I CCWWGG 2 cut(s) 820, 2109
Bst2UI CCWGG 1 cut(s) 363
Bst4CI ACNGT 9 cut(s) 189, 1101, 1391, 1407, 1839, 1960, 1970, 2475, 2515
Bst6I CTCTTC 9 cut(s) 90, 165, 723, 735, 741, 1101, 1812, 2219, 2459
BstAFI CTTAAG 1 cut(s) 545
BstAUI TGTACA 1 cut(s) 1063
BstBAI YACGTR 2 cut(s) 611, 2342
BstC8I GCNNGC 8 cut(s) 54, 72, 454, 1203, 1578, 2629, 2846, 2850
BstDEI CTNAG 9 cut(s) 17, 244, 254, 827, 1738, 1763, 1772, 1901, 2761
BstDSI CCRYGG 1 cut(s) 2109
BstKTI GATC 5 cut(s) 328, 357, 754, 2704, 2829
BstMAI GTCTC 7 cut(s) 483, 1350, 1388, 1757, 1848, 1904, 2046
BstMBI GATC 5 cut(s) 325, 354, 751, 2701, 2826
BstMWI GCNNNNNNNGC 6 cut(s) 62, 71, 453, 928, 1742, 2858
BstNI CCWGG 1 cut(s) 363
BstNSI RCATGY 3 cut(s) 506, 608, 2844
BstSCI CCNGG 2 cut(s) 361, 2788
BstSFI CTRYAG 2 cut(s) 340, 2471
BstV1I GCAGC 1 cut(s) 2330
BstV2I GAAGAC 2 cut(s) 219, 1487
BstX2I RGATCY 1 cut(s) 325
BstYI RGATCY 1 cut(s) 325
BsuI GTATCC 1 cut(s) 1705
BsuRI GGCC 5 cut(s) 1745, 1939, 1994, 2627, 2861
BtgI CCRYGG 1 cut(s) 2109
BtgZI GCGATG 1 cut(s) 1149
BtsIMutI CAGTG 5 cut(s) 59, 185, 1396, 1746, 2855
BveI ACCTGC 1 cut(s) 1620
Cac8I GCNNGC 8 cut(s) 54, 72, 454, 1203, 1578, 2629, 2846, 2850
CaiI CAGNNNCTG 3 cut(s) 187, 925, 2824
CciI TCATGA 2 cut(s) 567, 1348
Cfr10I RCCGGY 1 cut(s) 2676
Cfr13I GGNCC 5 cut(s) 1407, 1468, 1993, 2029, 2126
CseI GACGC 1 cut(s) 1562
Csp6I GTAC 5 cut(s) 1064, 1311, 1403, 1826, 2186
CspCI CAANNNNNGTGG 2 cut(s) 2237, 2272
CviQI GTAC 5 cut(s) 1064, 1311, 1403, 1826, 2186
DdeI CTNAG 9 cut(s) 17, 244, 254, 827, 1738, 1763, 1772, 1901, 2761
DpnI GATC 5 cut(s) 327, 356, 753, 2703, 2828
DpnII GATC 5 cut(s) 325, 354, 751, 2701, 2826
EaeI YGGCCR 3 cut(s) 1743, 1937, 2625
Eam1104I CTCTTC 9 cut(s) 90, 165, 723, 735, 741, 1101, 1812, 2219, 2459
EarI CTCTTC 9 cut(s) 90, 165, 723, 735, 741, 1101, 1812, 2219, 2459
Eco130I CCWWGG 2 cut(s) 820, 2109
Eco24I GRGCYC 1 cut(s) 148
Eco47I GGWCC 4 cut(s) 1407, 1468, 2029, 2126
Eco57I CTGAAG 8 cut(s) 164, 453, 860, 947, 1493, 1914, 2204, 2483
Eco72I CACGTG 2 cut(s) 611, 2342
EcoO109I RGGNCCY 2 cut(s) 1468, 2029
EcoRII CCWGG 1 cut(s) 361
EcoT14I CCWWGG 2 cut(s) 820, 2109
EcoT22I ATGCAT 2 cut(s) 1926, 2385
EcoT38I GRGCYC 1 cut(s) 148
ErhI CCWWGG 2 cut(s) 820, 2109
Esp3I CGTCTC 1 cut(s) 1848
FaqI GGGAC 4 cut(s) 605, 844, 883, 1203
FauI CCCGC 1 cut(s) 2004
FblI GTMKAC 2 cut(s) 954, 2470
Fnu4HI GCNGC 2 cut(s) 1992, 2319
FriOI GRGCYC 1 cut(s) 148
Fsp4HI GCNGC 2 cut(s) 1992, 2319
GluI GCNGC 2 cut(s) 1992, 2319
GsaI CCCAGC 3 cut(s) 14, 2138, 2325
GsuI CTGGAG 3 cut(s) 488, 776, 2716
HaeIII GGCC 5 cut(s) 1745, 1939, 1994, 2627, 2861
HapII CCGG 3 cut(s) 2494, 2677, 2789
HgaI GACGC 1 cut(s) 1562
HincII GTYRAC 3 cut(s) 955, 1387, 2749
HindII GTYRAC 3 cut(s) 955, 1387, 2749
HindIII AAGCTT 3 cut(s) 376, 412, 2566
HpaI GTTAAC 1 cut(s) 1387
HpaII CCGG 3 cut(s) 2494, 2677, 2789
HphI GGTGA 6 cut(s) 439, 449, 587, 1015, 1030, 1823
Hpy166II GTNNAC 8 cut(s) 895, 955, 1038, 1097, 1387, 2186, 2471, 2749
Hpy8I GTNNAC 8 cut(s) 895, 955, 1038, 1097, 1387, 2186, 2471, 2749
Hpy99I CGWCG 3 cut(s) 1556, 1811, 1843
HpyAV CCTTC 9 cut(s) 257, 428, 530, 967, 1420, 2228, 2282, 2350, 2386
HpyCH4III ACNGT 9 cut(s) 189, 1101, 1391, 1407, 1839, 1960, 1970, 2475, 2515
HpyCH4IV ACGT 3 cut(s) 610, 1533, 2341
HpyF10VI GCNNNNNNNGC 6 cut(s) 62, 71, 453, 928, 1742, 2858
HpyF3I CTNAG 9 cut(s) 17, 244, 254, 827, 1738, 1763, 1772, 1901, 2761
HpySE526I ACGT 3 cut(s) 610, 1533, 2341
Kpn2I TCCGGA 1 cut(s) 2493
KspAI GTTAAC 1 cut(s) 1387
Kzo9I GATC 5 cut(s) 325, 354, 751, 2701, 2826
LmnI GCTCC 3 cut(s) 469, 1905, 2732
Lsp1109I GCAGC 1 cut(s) 2330
LweI GCATC 7 cut(s) 191, 502, 940, 2095, 2370, 2392, 2841
MaeII ACGT 3 cut(s) 610, 1533, 2341
MaeIII GTNAC 6 cut(s) 427, 1709, 1867, 1964, 2359, 2764
MalI GATC 5 cut(s) 327, 356, 753, 2703, 2828
MboI GATC 5 cut(s) 325, 354, 751, 2701, 2826
MfeI CAATTG 1 cut(s) 421
MflI RGATCY 1 cut(s) 325
MhlI GDGCHC 1 cut(s) 148
MlsI TGGCCA 3 cut(s) 1745, 1939, 2627
MluNI TGGCCA 3 cut(s) 1745, 1939, 2627
MlyI GAGTC 5 cut(s) 1185, 1352, 1505, 1783, 2476
MmeI TCCRAC 8 cut(s) 12, 104, 303, 357, 1083, 1780, 2153, 2617
Mox20I TGGCCA 3 cut(s) 1745, 1939, 2627
Mph1103I ATGCAT 2 cut(s) 1926, 2385
MroI TCCGGA 1 cut(s) 2493
MroXI GAANNNNTTC 4 cut(s) 558, 915, 2244, 2801
MscI TGGCCA 3 cut(s) 1745, 1939, 2627
MslI CAYNNNNRTG 6 cut(s) 586, 603, 609, 936, 1014, 2366
Msp20I TGGCCA 3 cut(s) 1745, 1939, 2627
MspA1I CMGCKG 3 cut(s) 52, 70, 2321
MspCI CTTAAG 1 cut(s) 545
MspI CCGG 3 cut(s) 2494, 2677, 2789
MspR9I CCNGG 2 cut(s) 363, 2790
MunI CAATTG 1 cut(s) 421
Mva1269I GAATGC 3 cut(s) 1136, 1603, 1926
MvaI CCWGG 1 cut(s) 363
MwoI GCNNNNNNNGC 6 cut(s) 62, 71, 453, 928, 1742, 2858
NciI CCSGG 1 cut(s) 2790
NcoI CCATGG 1 cut(s) 2109
NdeII GATC 5 cut(s) 325, 354, 751, 2701, 2826
NheI GCTAGC 1 cut(s) 452
NlaIV GGNNCC 5 cut(s) 57, 66, 167, 1469, 2031
NmuCI GTSAC 4 cut(s) 427, 1964, 2359, 2764
NsiI ATGCAT 2 cut(s) 1926, 2385
NspI RCATGY 3 cut(s) 506, 608, 2844
PagI TCATGA 2 cut(s) 567, 1348
PciI ACATGT 1 cut(s) 502
PctI GAATGC 3 cut(s) 1136, 1603, 1926
PdmI GAANNNNTTC 4 cut(s) 558, 915, 2244, 2801
PfeI GAWTC 6 cut(s) 175, 1029, 1180, 2072, 2261, 2497
PkrI GCNGC 2 cut(s) 1993, 2320
PleI GAGTC 5 cut(s) 1185, 1352, 1505, 1782, 2475
PmaCI CACGTG 2 cut(s) 611, 2342
PmlI CACGTG 2 cut(s) 611, 2342
PpsI GAGTC 5 cut(s) 1185, 1352, 1505, 1782, 2475
Ppu21I YACGTR 2 cut(s) 611, 2342
PpuMI RGGWCCY 2 cut(s) 1468, 2029
PscI ACATGT 1 cut(s) 502
PshBI ATTAAT 1 cut(s) 1559
PsiI TTATAA 2 cut(s) 765, 1331
Psp1406I AACGTT 1 cut(s) 1533
Psp5II RGGWCCY 2 cut(s) 1468, 2029
Psp6I CCWGG 1 cut(s) 361
PspCI CACGTG 2 cut(s) 611, 2342
PspFI CCCAGC 3 cut(s) 10, 2134, 2321
PspGI CCWGG 1 cut(s) 361
PspN4I GGNNCC 5 cut(s) 57, 66, 167, 1469, 2031
PspPI GGNCC 5 cut(s) 1407, 1468, 1993, 2029, 2126
PspPPI RGGWCCY 2 cut(s) 1468, 2029
PstNI CAGNNNCTG 3 cut(s) 187, 925, 2824
PsuI RGATCY 1 cut(s) 325
PvuII CAGCTG 1 cut(s) 2321
RsaI GTAC 5 cut(s) 1065, 1312, 1404, 1827, 2187
RsaNI GTAC 5 cut(s) 1064, 1311, 1403, 1826, 2186
RseI CAYNNNNRTG 6 cut(s) 586, 603, 609, 936, 1014, 2366
SalI GTCGAC 1 cut(s) 953
SatI GCNGC 2 cut(s) 1992, 2319
Sau3AI GATC 5 cut(s) 325, 354, 751, 2701, 2826
Sau96I GGNCC 5 cut(s) 1407, 1468, 1993, 2029, 2126
ScaI AGTACT 1 cut(s) 1827
SchI GAGTC 5 cut(s) 1185, 1352, 1505, 1783, 2476
ScrFI CCNGG 2 cut(s) 363, 2790
SduI GDGCHC 1 cut(s) 148
SfaNI GCATC 7 cut(s) 191, 502, 940, 2095, 2370, 2392, 2841
SfcI CTRYAG 2 cut(s) 340, 2471
SinI GGWCC 4 cut(s) 1407, 1468, 2029, 2126
SmiMI CAYNNNNRTG 6 cut(s) 586, 603, 609, 936, 1014, 2366
SmlI CTYRAG 2 cut(s) 545, 1506
SmoI CTYRAG 2 cut(s) 545, 1506
SsiI CCGC 7 cut(s) 50, 68, 316, 1847, 1991, 2011, 2836
SspI AATATT 2 cut(s) 1726, 2277
StyD4I CCNGG 2 cut(s) 361, 2788
StyI CCWWGG 2 cut(s) 820, 2109
TaaI ACNGT 9 cut(s) 189, 1101, 1391, 1407, 1839, 1960, 1970, 2475, 2515
TaiI ACGT 3 cut(s) 613, 1536, 2344
TaqI TCGA 7 cut(s) 954, 1121, 1194, 1321, 1335, 1361, 2447
TatI WGTACW 2 cut(s) 1063, 1825
TauI GCSGC 1 cut(s) 1994
TfiI GAWTC 6 cut(s) 175, 1029, 1180, 2072, 2261, 2497
TscAI CASTG 5 cut(s) 66, 192, 1396, 1746, 2862
TseFI GTSAC 4 cut(s) 427, 1964, 2359, 2764
TseI GCWGC 1 cut(s) 2318
Tsp45I GTSAC 4 cut(s) 427, 1964, 2359, 2764
TspGWI ACGGA 3 cut(s) 1227, 1687, 2378
TspRI CASTG 5 cut(s) 66, 192, 1396, 1746, 2862
Vha464I CTTAAG 1 cut(s) 545
VpaK11BI GGWCC 4 cut(s) 1407, 1468, 2029, 2126
VspI ATTAAT 1 cut(s) 1559
XapI RAATTY 9 cut(s) 249, 914, 1232, 1450, 2115, 2161, 2374, 2433, 2694
XceI RCATGY 3 cut(s) 506, 608, 2844
XmiI GTMKAC 2 cut(s) 954, 2470
XmnI GAANNNNTTC 4 cut(s) 558, 915, 2244, 2801
ZrmI AGTACT 1 cut(s) 1827
Zsp2I ATGCAT 2 cut(s) 1926, 2385
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.