Rw7G017910

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
Physical Location & Seq
Forward (+)
19055363 .. 19063795
8433 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G017910.1

Sequence Viewer

Length: 3942 bp
ATGGAGATTCTTGCTGCAATTGCCGGAAAACTTGCCGAATACACAGTTGAACCAATTGGACGCCAAGTGGGTTATCTAGCTCACTACAAAAGCAACTATCAAAACCTCCTGACCAAGGTTGAAGACCTGCGTGATGCCAGAGACGAGGTTCAACAAAAGGCTGATGAATTTGAGAGCAGCGGTAAAAGAATCTCGACTAGTGTCTGGAAGTGGAAGAGAAGAGTGGATGCAATCATCCCAGAGGCAGAGACATTCTTGAATGATGGACGCCATGCACAGACTGCATGTCTCCACGGCTTTTGTCCTAATTTGGTGCTCTGTTATCACCTAAGCAAGAAATCAACAAAATTGGCGAAGGAAATTGTTGAGCTTTATGGACAAAACGAGTTTCCCAATTTTGCATTTAATGTTCGCCCACAAGAGGTATGTCTCTTATCTACCGGGCATTACCATGCATTTGATTCAAGAAATTCAACTGTGATGAGAGTCATGGGGGAACTCAGAAATCCTAATACAGAAATGATTCTAGTATGGGGAATCGGTGGAGTAGGGAAGACCACACTTGTGGAAGAAGTTCTTAGGAAAGCTAAGGACGACAACTTATTTGATGATGTGGTGATGGTGAGAGATGTTAAAGAGAACCCAGACCATGTAAAAATCCAAAAAGAAATTGCAATGAAGTTAGGTATGAGCATTGACGAAAATCATACTCTAGCTGAAAGAGCATCCATTCTATGCAATAGGATAAAAGACCAGAGAACTGTTGTAGTTTTAGACGATGTTTGGGAAAAAATTAATCTGGGGGCTATCGGACTTCCCCGTCTGGTGAATTTTAAAGTACTGTTGACATGTAGAAGCCGAAAGGAATTGTCATTGGATATGCGTAAGCAGAAAGATATTTCGCTTGATGTTTTAGAGGAAGAGGAAGCATGGAGTTTATTTGAGAAGATGGCTGGTGATGTTGTCAAAAATAGCCGCATACGAAGCATAGCAACTCAAGTAGCCCAAAAATGTGGAGGTTTGCCAGTCTTGATTGTTACAGTTGCAAGAGCTTTGAAAGACAGAAACAAGTTGCATGCATGGAAAGACACCTTGAGACGCCTTAGAAGTTTTGACGAAAAAGAATTGACGGACAAAGCATACTTGGCTTTAGAGTGGAGTTACGATCAATTGGAAGATAAAGAGCTTAAGCCTTTGTTCTTGCTTTGTGGGATTATTGTAGTTAAGAACCATATTTATTTGGCAGACTTGTTGAAATATGGTTTTGGTTTGGGTTTGATTAAAAATGTCGATACAATAGAAGAAGCACGAGATGCATTGGATACACTGGTTGAAAAGCTTAAAGATTCTTGCTTGTTGTTGGACAGTGATATCAATATGCATGTTAGAATGCATGATCTCGTATGCGAGGTTGCTGCGTGGATTGCATCCAGAAAACACCACGTCTTATCAGTTGGGTATGGTGGTGAATTGAAAGAATGGCCTGAGAAAGATTTCTTTAAAAGGTGCAGTACGATGTCCTTAAAATCCAGCAATATTCCCATGCTTTCTCAACTATCTGGGGAATGCCAGAAACTAGAAATGTTTTATTTGTACAATAAAGATGTTGCATCGGTGGAAATCCCAGCCAACTTTTTTAGTGAAATGGAGAAACTGAAAGTGTTGGGTTTAACTGAAGTGGATATGGTGTCACTACCTTCATCTCTTCAGTTCTTAAAGAATATTCAGACGTTGTGTTTAGAAGACTGTGAGTTGGAAGATGTAGCTCATGTTGGACATCTAAGCAACTTACAGATTCTTAGCTTTGCGCGGTCCAACATTAAAAAGCTACCTGAAGAAATAGGACAATTGATTCGACTGAGATGGTTGGATTTGAGTGATTGTGCCAAACTTGAAGTGATTTCGCCTAATGTTATTTCAAGGTTGGAAAGACTAGAAGACTTGACATTGAGAAACGTCTTTCTCAAATGGGAGGCTGAAAGGGGAGGAAGTAATGCTAGTCTTTTAGAGCTAAAAGACTTGTCTCAACTAACTGCATTGGAGATATATATTGCAGATGCAAATGTTCTTCCATCAAACTTGTTCTCCAGTAAGTTGGTAAGATACCGAATATATATTGGCGATGTTTGGAAGAGCAGATGGACGTGGAAGAAGACTATGGTTGAAACGGCCTTCAACACGCTAAAACTGAAGATCGCTCCCGGCAATGAATTGGACCAAGGTATAAAAACGTTGGTAAAGAGATCTGAAGATTTGTCTTTGGTTGGAACAGAGAGTGCTAATAGTATTCTCCGTCAATTAGATGTTGAAGATTTTCAGCAACTGATCCGCCTCCGTCTCCAAAACAATGTTGATTTCACCTATATCATTAATAGGAAGGTTGTGTTCCCCAACTTAACAACCTTGAGCATATGTAGCTGTGACCATCTAAGTTTCTTGTTCTCATTTTCTATGGCTAAAAGTTTGGTGGAGCTCAAACATCTTGAAGTATCCAGTTGTGAAATAATGGAAGAGATAGTATCAGCAAGGGATCAATCCAACGGAGAAAATATCGATATCATGTTTTGTAAGTTGGAAAGTCTAATACTGAATGAACTCCCAAACATCACTAGATTCTGTACTGAAAGTTGTACTGAATTTTCTCCTGTGACGAAATTTGATACGGAATTGGGGCCATCCATCTTTGATCCTACGAGTAGTAAAAAACTTGATGTCGAGAATGGGACTGTTGTACGAGCATGTCTTTTTGACGCACAGGTAAAATTTCTGAGCTTGGAGAGACTGAAAATCGATGGGCTAGGGAAGTTGCACACGCTATGGAACAATAAATTTGCTGATCAAGACTCTTTTTGCCAACTCAAAGTAGTTAGAGTTTCAAATTGCAACAGTCTGAAAAAGATCTTTCCAGTTTCAGTAGCCAGACGTCTCCAAAAGCTACATTCGCTGGATGTGACAGGGTGTGATGAAGTGGAGGAAATCATTACTGGTGAACAAGGACTAGAATCAGAGTCTCCTCATTTCGTGTTCCCAAAAGTAACATATGTGGAACTTTCTAATATGCCCAAACTGAGTAGATTCTATCCTGGGATTATTGCTTCCAAGTGGCCGTTACTCAAACTACTAAACATTCAAGGATGTGAGAAAGTGAAGATGTTTGCCGCAGAACTTCCAATTTCTTCAGAAAGACATGAGCCGAACCCTCTAATTGAACAATCTCTCTTTCTAATTGACAAGGATTCATTCCCCAATTTAGAAGACTTATGGCTGGAAGTTGCGGGTGAGATTTGGTACGGTCCATCATCATCCCCAGCAGCACAGTTCTTTCCCAAATTAAAAATTATTCACTTTCGCAACTACGCACGGTTCTCCAAGCAAGCCGCAATACATTTCCTTGAGAAATTACCGAATCTTGAGGAGATACAAGTGGGCTCGGATGATGTTTCCACGGAAATATTTGTGAATGAAGAAATTAATGGCGGTGAGGTGATACATGCAGTAAAAACTTTGAGGGTCGATGACATGCCCAAGCTCTTGCAATTAGGGAATGGGAACTCTCAAACAGCGGGCCCACTTTTCCCAAACTTGGTCACTCTTCACGTGTCTCATTGTTGGATGTTAAAGAGTGTGGAGTCATCCGCAATATCCTTCCGCAATCTAACAACTCTGCGAGTGAGGCGTTGTGCTGGATTGGAATACTTGACAAGTTATTCCGTAGCTAAGAGCTTAATGCAACTGACAACACTGGAAGTGAGATGGTGTAAAAGCCTGAGAGCAATTATAGGGGCAAGCAACGAAGATGATCATGATACTTGTGAGATTGCTTTCAGTCGGTTGCAACATTTGACACTTTATGATCTACCAAGACTGCAAGGCTTTTGCTCGGGAAATTGCATTGTCAAACTCCCATCCTCAACACAGTTACATGTCATTGACCACAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1313

Amino Acids

149.16

Weight (kDa)

6.06

Isoelectric Point (pI)

44.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 158 - 319 5.3e-27 NB-ARC domain
LRR_14 PF23598 590 - 861 2e-10 Leucine-rich repeat region
LRR_RPS2 PF23247 791 - 875 7.1e-11 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 921 - 988 1.2e-15 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1094 - 1209 2.8e-10 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1213 - 1293 3.4e-11 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 819
AatII GACGTC 1 cut(s) 2926
Acc36I ACCTGC 1 cut(s) 135
AccII CGCG 1 cut(s) 1810
AclI AACGTT 1 cut(s) 2231
AclWI GGATC 3 cut(s) 2320, 2538, 2681
AcoI YGGCCR 1 cut(s) 3104
AcsI RAATTY 7 cut(s) 167, 469, 829, 2636, 2654, 2762, 2828
AcuI CTGAAG 6 cut(s) 1691, 1695, 1854, 2210, 2268, 3162
AcvI CACGTG 1 cut(s) 3598
AcyI GRCGYC 4 cut(s) 61, 268, 1099, 2923
AfaI GTAC 7 cut(s) 840, 1513, 1595, 2620, 2632, 2733, 3290
AfiI CCNNNNNNNGG 3 cut(s) 115, 421, 3583
AflII CTTAAG 1 cut(s) 1187
AflIII ACRYGT 3 cut(s) 848, 3597, 3922
AhdI GACNNNNNGTC 1 cut(s) 285
AhlI ACTAGT 1 cut(s) 197
AjiI CACGTC 2 cut(s) 1444, 2145
AjnI CCWGG 1 cut(s) 3082
AleI CACNNNNGTG 1 cut(s) 563
Alw21I GWGCWC 2 cut(s) 318, 2475
AlwI GGATC 3 cut(s) 2320, 2538, 2681
AlwNI CAGNNNCTG 1 cut(s) 2323
Ama87I CYCGRG 1 cut(s) 3880
AoxI GGCC 5 cut(s) 1481, 2169, 2672, 3104, 3565
ApaI GGGCCC 1 cut(s) 3569
ApeKI GCWGC 4 cut(s) 14, 177, 1415, 3311
ApoI RAATTY 7 cut(s) 167, 469, 829, 2636, 2654, 2762, 2828
ArsI GACNNNNNNTTYG 4 cut(s) 587, 619, 1836, 1868
AseI ATTAAT 3 cut(s) 795, 2370, 3471
Asp700I GAANNNNTTC 4 cut(s) 522, 573, 1493, 2313
AspLEI GCGC 1 cut(s) 1810
AspS9I GGNCC 6 cut(s) 1812, 2215, 2672, 3293, 3565, 3566
AsuC2I CCSGG 2 cut(s) 442, 2202
AvaI CYCGRG 1 cut(s) 3880
AvaII GGWCC 3 cut(s) 1812, 2215, 3293
BaeGI GKGCMC 1 cut(s) 3569
BaeI ACNNNNGTAYC 2 cut(s) 1314, 1347
BanII GRGCYC 3 cut(s) 2475, 3431, 3569
BauI CACGAG 1 cut(s) 1308
BbrPI CACGTG 1 cut(s) 3598
BbsI GAAGAC 6 cut(s) 129, 560, 1749, 1944, 2159, 3261
Bbv12I GWGCWC 2 cut(s) 318, 2475
BbvI GCAGC 3 cut(s) 189, 1402, 3323
BceAI ACGGC 3 cut(s) 310, 2184, 3091
BcgI CGANNNNNNTGC 2 cut(s) 1397, 1431
BciT130I CCWGG 1 cut(s) 3084
BciVI GTATCC 2 cut(s) 1315, 2500
BclI TGATCA 2 cut(s) 2836, 3799
BcnI CCSGG 2 cut(s) 442, 2202
BcuI ACTAGT 1 cut(s) 197
BfrI CTTAAG 1 cut(s) 1187
BfuAI ACCTGC 1 cut(s) 135
BfuI GTATCC 2 cut(s) 1315, 2500
BglII AGATCT 2 cut(s) 2243, 2898
BisI GCNGC 7 cut(s) 15, 178, 976, 1416, 3159, 3312, 3378
BlsI GCNGC 7 cut(s) 16, 179, 977, 1417, 3160, 3313, 3379
BmcAI AGTACT 1 cut(s) 840
Bme1390I CCNGG 3 cut(s) 442, 2202, 3084
Bme18I GGWCC 3 cut(s) 1812, 2215, 3293
BmeRI GACNNNNNGTC 1 cut(s) 285
BmeT110I CYCGRG 1 cut(s) 3880
BmgBI CACGTC 2 cut(s) 1444, 2145
BmgT120I GGNCC 6 cut(s) 1812, 2215, 2672, 3293, 3565, 3566
BmiI GGNNCC 2 cut(s) 2673, 3567
BmrFI CCNGG 3 cut(s) 442, 2202, 3084
BmsI GCATC 7 cut(s) 124, 217, 734, 1303, 1436, 1619, 2047
BoxI GACNNNNGTC 1 cut(s) 200
BpiI GAAGAC 6 cut(s) 129, 560, 1749, 1944, 2159, 3261
BpmI CTGGAG 1 cut(s) 2071
Bpu10I CCTNAGC 2 cut(s) 329, 588
BpuEI CTTGAG 5 cut(s) 981, 1114, 2425, 3413, 3431
BpuMI CCSGG 2 cut(s) 442, 2202
Bsa29I ATCGAT 2 cut(s) 2553, 2790
BsaAI YACGTR 1 cut(s) 3598
BsaHI GRCGYC 4 cut(s) 61, 268, 1099, 2923
BsaJI CCNNGG 5 cut(s) 114, 292, 2218, 3083, 3444
BsaXI ACNNNNNCTCC 2 cut(s) 2069, 2099
Bsc4I CCNNNNNNNGG 3 cut(s) 115, 421, 3583
Bse1I ACTGG 7 cut(s) 1025, 1332, 2088, 2493, 2906, 2989, 3747
Bse3DI GCAATG 2 cut(s) 681, 2212
BseBI CCWGG 1 cut(s) 3084
BseCI ATCGAT 2 cut(s) 2553, 2790
BseDI CCNNGG 5 cut(s) 114, 292, 2218, 3083, 3444
BseLI CCNNNNNNNGG 3 cut(s) 115, 421, 3583
BseMI GCAATG 2 cut(s) 681, 2212
BseMII CTCAG 6 cut(s) 514, 1476, 1850, 2759, 3059, 3758
BseNI ACTGG 7 cut(s) 1025, 1332, 2088, 2493, 2906, 2989, 3747
BseRI GAGGAG 2 cut(s) 3003, 3428
BseSI GKGCMC 1 cut(s) 3569
BseXI GCAGC 3 cut(s) 189, 1402, 3323
BseYI CCCAGC 2 cut(s) 1624, 3307
BsgI GTGCAG 1 cut(s) 1528
Bsh1236I CGCG 1 cut(s) 1810
BshFI GGCC 5 cut(s) 1483, 2171, 2674, 3106, 3567
BshVI ATCGAT 2 cut(s) 2553, 2790
BsiHKAI GWGCWC 2 cut(s) 318, 2475
BsiHKCI CYCGRG 1 cut(s) 3880
BsiSI CCGG 3 cut(s) 24, 441, 2202
BslFI GGGAC 1 cut(s) 2737
BslI CCNNNNNNNGG 3 cut(s) 115, 421, 3583
BsmBI CGTCTC 4 cut(s) 135, 1090, 2342, 2930
BsmFI GGGAC 1 cut(s) 2737
BsmI GAATGC 2 cut(s) 1395, 1571
BsnI GGCC 5 cut(s) 1483, 2171, 2674, 3106, 3567
BsoBI CYCGRG 1 cut(s) 3880
Bsp120I GGGCCC 1 cut(s) 3565
Bsp1286I GDGCHC 4 cut(s) 318, 2475, 3431, 3569
Bsp1407I TGTACA 1 cut(s) 1593
BspANI GGCC 5 cut(s) 1483, 2171, 2674, 3106, 3567
BspCNI CTCAG 6 cut(s) 513, 1477, 1851, 2760, 3060, 3759
BspDI ATCGAT 2 cut(s) 2553, 2790
BspFNI CGCG 1 cut(s) 1810
BspHI TCATGA 1 cut(s) 3802
BspLI GGNNCC 2 cut(s) 2673, 3567
BspMI ACCTGC 1 cut(s) 135
BspPI GGATC 3 cut(s) 2320, 2538, 2681
BspQI GCTCTTC 1 cut(s) 2126
BspTI CTTAAG 1 cut(s) 1187
BsrDI GCAATG 2 cut(s) 681, 2212
BsrGI TGTACA 1 cut(s) 1593
BsrI ACTGG 7 cut(s) 1025, 1332, 2088, 2493, 2906, 2989, 3747
BssECI CCNNGG 5 cut(s) 114, 292, 2218, 3083, 3444
BssNI GRCGYC 4 cut(s) 61, 268, 1099, 2923
BssSI CACGAG 1 cut(s) 1308
BssT1I CCWWGG 2 cut(s) 114, 2218
Bst2BI CACGAG 1 cut(s) 1308
Bst2UI CCWGG 1 cut(s) 3084
Bst6I CTCTTC 7 cut(s) 209, 214, 915, 1710, 2126, 2505, 3597
BstACI GRCGYC 4 cut(s) 61, 268, 1099, 2923
BstAFI CTTAAG 1 cut(s) 1187
BstAPI GCANNNNNTGC 2 cut(s) 281, 1313
BstAUI TGTACA 1 cut(s) 1593
BstBAI YACGTR 1 cut(s) 3598
BstC8I GCNNGC 4 cut(s) 1077, 3375, 3565, 3787
BstDSI CCRYGG 2 cut(s) 292, 3444
BstENI CCTNNNNNAGG 1 cut(s) 113
BstFNI CGCG 1 cut(s) 1810
BstHHI GCGC 1 cut(s) 1810
BstNI CCWGG 1 cut(s) 3084
BstNSI RCATGY 8 cut(s) 288, 852, 1079, 1385, 2742, 3494, 3523, 3926
BstPAI GACNNNNGTC 1 cut(s) 200
BstSCI CCNGG 3 cut(s) 440, 2200, 3082
BstSLI GKGCMC 1 cut(s) 3569
BstUI CGCG 1 cut(s) 1810
BstV1I GCAGC 3 cut(s) 189, 1402, 3323
BstV2I GAAGAC 6 cut(s) 129, 560, 1749, 1944, 2159, 3261
BstX2I RGATCY 2 cut(s) 2243, 2898
BstXI CCANNNNNNTGG 3 cut(s) 565, 1013, 2095
BstYI RGATCY 2 cut(s) 2243, 2898
Bsu15I ATCGAT 2 cut(s) 2553, 2790
BsuI GTATCC 2 cut(s) 1315, 2500
BsuRI GGCC 5 cut(s) 1483, 2171, 2674, 3106, 3567
BsuTUI ATCGAT 2 cut(s) 2553, 2790
BtgI CCRYGG 2 cut(s) 292, 3444
BtgZI GCGATG 1 cut(s) 2136
BtrI CACGTC 2 cut(s) 1444, 2145
BtsIMutI CAGTG 3 cut(s) 1325, 1372, 3740
BveI ACCTGC 1 cut(s) 135
Cac8I GCNNGC 4 cut(s) 1077, 3375, 3565, 3787
CaiI CAGNNNCTG 1 cut(s) 2323
CciI TCATGA 1 cut(s) 3802
CfoI GCGC 1 cut(s) 1810
Cfr13I GGNCC 6 cut(s) 1812, 2215, 2672, 3293, 3565, 3566
ClaI ATCGAT 2 cut(s) 2553, 2790
CseI GACGC 4 cut(s) 69, 276, 1107, 2759
Csp6I GTAC 7 cut(s) 839, 1512, 1594, 2619, 2631, 2732, 3289
CspCI CAANNNNNGTGG 2 cut(s) 281, 316
CviQI GTAC 7 cut(s) 839, 1512, 1594, 2619, 2631, 2732, 3289
DraI TTTAAA 2 cut(s) 835, 1501
DrdI GACNNNNNNGTC 1 cut(s) 819
DriI GACNNNNNGTC 1 cut(s) 285
DseDI GACNNNNNNGTC 1 cut(s) 819
EaeI YGGCCR 1 cut(s) 3104
Eam1104I CTCTTC 7 cut(s) 209, 214, 915, 1710, 2126, 2505, 3597
Eam1105I GACNNNNNGTC 1 cut(s) 285
EarI CTCTTC 7 cut(s) 209, 214, 915, 1710, 2126, 2505, 3597
EciI GGCGGA 1 cut(s) 2318
Ecl136II GAGCTC 1 cut(s) 2473
Eco130I CCWWGG 2 cut(s) 114, 2218
Eco24I GRGCYC 3 cut(s) 2475, 3431, 3569
Eco32I GATATC 2 cut(s) 1372, 2557
Eco47I GGWCC 3 cut(s) 1812, 2215, 3293
Eco53kI GAGCTC 1 cut(s) 2473
Eco57I CTGAAG 6 cut(s) 1691, 1695, 1854, 2210, 2268, 3162
Eco72I CACGTG 1 cut(s) 3598
Eco88I CYCGRG 1 cut(s) 3880
EcoICRI GAGCTC 1 cut(s) 2473
EcoNI CCTNNNNNAGG 1 cut(s) 113
EcoRII CCWGG 1 cut(s) 3082
EcoRV GATATC 2 cut(s) 1372, 2557
EcoT14I CCWWGG 2 cut(s) 114, 2218
EcoT22I ATGCAT 5 cut(s) 457, 1081, 1318, 1383, 1395
EcoT38I GRGCYC 3 cut(s) 2475, 3431, 3569
ErhI CCWWGG 2 cut(s) 114, 2218
Esp3I CGTCTC 4 cut(s) 135, 1090, 2342, 2930
FalI AAGNNNNNCTT 2 cut(s) 561, 593
FaqI GGGAC 1 cut(s) 2737
FauI CCCGC 2 cut(s) 3268, 3556
FauNDI CATATG 2 cut(s) 2411, 3040
FbaI TGATCA 2 cut(s) 2836, 3799
Fnu4HI GCNGC 7 cut(s) 15, 178, 976, 1416, 3159, 3312, 3378
FriOI GRGCYC 3 cut(s) 2475, 3431, 3569
Fsp4HI GCNGC 7 cut(s) 15, 178, 976, 1416, 3159, 3312, 3378
GlaI GCGC 1 cut(s) 1809
GluI GCNGC 7 cut(s) 15, 178, 976, 1416, 3159, 3312, 3378
GsaI CCCAGC 2 cut(s) 1628, 3311
GsuI CTGGAG 1 cut(s) 2071
HaeIII GGCC 5 cut(s) 1483, 2171, 2674, 3106, 3567
HapII CCGG 3 cut(s) 24, 441, 2202
HgaI GACGC 4 cut(s) 69, 276, 1107, 2759
HhaI GCGC 1 cut(s) 1810
Hin1I GRCGYC 4 cut(s) 61, 268, 1099, 2923
Hin6I GCGC 1 cut(s) 1808
HinP1I GCGC 1 cut(s) 1808
HincII GTYRAC 1 cut(s) 846
HindII GTYRAC 1 cut(s) 846
HindIII AAGCTT 1 cut(s) 1337
HpaII CCGG 3 cut(s) 24, 441, 2202
Hpy166II GTNNAC 2 cut(s) 846, 2990
Hpy188I TCNGA 9 cut(s) 503, 812, 1728, 2248, 2769, 2892, 3007, 3181, 3433
Hpy8I GTNNAC 2 cut(s) 846, 2990
HpyAV CCTTC 5 cut(s) 349, 1707, 2182, 2371, 3655
HpyCH4IV ACGT 7 cut(s) 1443, 1730, 1956, 2144, 2231, 2923, 3597
HpySE526I ACGT 7 cut(s) 1443, 1730, 1956, 2144, 2231, 2923, 3597
Hsp92I GRCGYC 4 cut(s) 61, 268, 1099, 2923
HspAI GCGC 1 cut(s) 1808
Ksp22I TGATCA 2 cut(s) 2836, 3799
LguI GCTCTTC 1 cut(s) 2126
LmnI GCTCC 2 cut(s) 2203, 2470
Lsp1109I GCAGC 3 cut(s) 189, 1402, 3323
LweI GCATC 7 cut(s) 124, 217, 734, 1303, 1436, 1619, 2047
MaeII ACGT 7 cut(s) 1443, 1730, 1956, 2144, 2231, 2923, 3597
MfeI CAATTG 4 cut(s) 18, 54, 1169, 1847
MflI RGATCY 2 cut(s) 2243, 2898
MhlI GDGCHC 4 cut(s) 318, 2475, 3431, 3569
MlyI GAGTC 4 cut(s) 495, 2837, 3017, 3638
Mph1103I ATGCAT 5 cut(s) 457, 1081, 1318, 1383, 1395
MroXI GAANNNNTTC 4 cut(s) 522, 573, 1493, 2313
MslI CAYNNNNRTG 2 cut(s) 450, 563
MspA1I CMGCKG 2 cut(s) 180, 3563
MspCI CTTAAG 1 cut(s) 1187
MspI CCGG 3 cut(s) 24, 441, 2202
MspR9I CCNGG 3 cut(s) 442, 2202, 3084
MunI CAATTG 4 cut(s) 18, 54, 1169, 1847
Mva1269I GAATGC 2 cut(s) 1395, 1571
MvaI CCWGG 1 cut(s) 3084
MvnI CGCG 1 cut(s) 1810
NciI CCSGG 2 cut(s) 442, 2202
NdeI CATATG 2 cut(s) 2411, 3040
NlaIV GGNNCC 2 cut(s) 2673, 3567
NmuCI GTSAC 5 cut(s) 1689, 2420, 2647, 2950, 3586
NsiI ATGCAT 5 cut(s) 457, 1081, 1318, 1383, 1395
NspI RCATGY 8 cut(s) 288, 852, 1079, 1385, 2742, 3494, 3523, 3926
OliI CACNNNNGTG 1 cut(s) 563
PaeI GCATGC 1 cut(s) 1079
PagI TCATGA 1 cut(s) 3802
PciI ACATGT 2 cut(s) 848, 3922
PciSI GCTCTTC 1 cut(s) 2126
PctI GAATGC 2 cut(s) 1395, 1571
PdmI GAANNNNTTC 4 cut(s) 522, 573, 1493, 2313
PkrI GCNGC 7 cut(s) 16, 179, 977, 1417, 3160, 3313, 3379
PleI GAGTC 4 cut(s) 494, 2837, 3016, 3637
PmaCI CACGTG 1 cut(s) 3598
PmlI CACGTG 1 cut(s) 3598
PpsI GAGTC 4 cut(s) 494, 2837, 3016, 3637
Ppu21I YACGTR 1 cut(s) 3598
PscI ACATGT 2 cut(s) 848, 3922
PshAI GACNNNNGTC 1 cut(s) 200
PshBI ATTAAT 3 cut(s) 795, 2370, 3471
Psp124BI GAGCTC 1 cut(s) 2475
Psp1406I AACGTT 1 cut(s) 2231
Psp6I CCWGG 1 cut(s) 3082
PspCI CACGTG 1 cut(s) 3598
PspFI CCCAGC 2 cut(s) 1624, 3307
PspGI CCWGG 1 cut(s) 3082
PspN4I GGNNCC 2 cut(s) 2673, 3567
PspOMI GGGCCC 1 cut(s) 3565
PspPI GGNCC 6 cut(s) 1812, 2215, 2672, 3293, 3565, 3566
PstNI CAGNNNCTG 1 cut(s) 2323
PsuI RGATCY 2 cut(s) 2243, 2898
RsaI GTAC 7 cut(s) 840, 1513, 1595, 2620, 2632, 2733, 3290
RsaNI GTAC 7 cut(s) 839, 1512, 1594, 2619, 2631, 2732, 3289
RseI CAYNNNNRTG 2 cut(s) 450, 563
SacI GAGCTC 1 cut(s) 2475
SapI GCTCTTC 1 cut(s) 2126
SatI GCNGC 7 cut(s) 15, 178, 976, 1416, 3159, 3312, 3378
Sau96I GGNCC 6 cut(s) 1812, 2215, 2672, 3293, 3565, 3566
ScaI AGTACT 1 cut(s) 840
SchI GAGTC 4 cut(s) 495, 2837, 3017, 3638
ScrFI CCNGG 3 cut(s) 442, 2202, 3084
SduI GDGCHC 4 cut(s) 318, 2475, 3431, 3569
SfaNI GCATC 7 cut(s) 124, 217, 734, 1303, 1436, 1619, 2047
SinI GGWCC 3 cut(s) 1812, 2215, 3293
SmiMI CAYNNNNRTG 2 cut(s) 450, 563
SmlI CTYRAG 6 cut(s) 996, 1093, 1187, 2404, 3392, 3410
SmoI CTYRAG 6 cut(s) 996, 1093, 1187, 2404, 3392, 3410
SpeI ACTAGT 1 cut(s) 197
SphI GCATGC 1 cut(s) 1079
SspI AATATT 3 cut(s) 1537, 1723, 3453
SstI GAGCTC 1 cut(s) 2475
StyD4I CCNGG 3 cut(s) 440, 2200, 3082
StyI CCWWGG 2 cut(s) 114, 2218
TaiI ACGT 7 cut(s) 1446, 1733, 1959, 2147, 2234, 2926, 3600
TaqI TCGA 7 cut(s) 194, 1290, 1855, 2553, 2715, 2790, 3513
TatI WGTACW 4 cut(s) 838, 1593, 2618, 2630
TauI GCSGC 3 cut(s) 978, 3161, 3380
TscAI CASTG 3 cut(s) 1332, 1372, 3747
TseFI GTSAC 5 cut(s) 1689, 2420, 2647, 2950, 3586
TseI GCWGC 4 cut(s) 14, 177, 1415, 3311
Tsp45I GTSAC 5 cut(s) 1689, 2420, 2647, 2950, 3586
TspDTI ATGAA 8 cut(s) 180, 692, 1689, 2223, 2607, 2979, 3228, 3477
TspGWI ACGGA 7 cut(s) 1145, 2282, 2324, 2556, 2678, 3461, 3700
TspRI CASTG 3 cut(s) 1332, 1372, 3747
Vha464I CTTAAG 1 cut(s) 1187
VpaK11BI GGWCC 3 cut(s) 1812, 2215, 3293
VspI ATTAAT 3 cut(s) 795, 2370, 3471
XagI CCTNNNNNAGG 1 cut(s) 113
XapI RAATTY 7 cut(s) 167, 469, 829, 2636, 2654, 2762, 2828
XceI RCATGY 8 cut(s) 288, 852, 1079, 1385, 2742, 3494, 3523, 3926
XmnI GAANNNNTTC 4 cut(s) 522, 573, 1493, 2313
ZraI GACGTC 1 cut(s) 2924
ZrmI AGTACT 1 cut(s) 840
Zsp2I ATGCAT 5 cut(s) 457, 1081, 1318, 1383, 1395
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.