Rh2CG007400

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Forward (+)
685733 .. 689919
4187 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG007400.1

Sequence Viewer

Length: 2181 bp
ATGGATTTTCTCTCTGCAATTGGTAGGGCCATTGTTGAACCAATTGTCAGGTACACGGTTCAACCTGTTGCACGTCAAGTGGGTTATGTTATTCACTTCAAAAGAAACCTTCAAAAACTGGAGGCTCGAGTGGAAGAATTGAGAGCTGCTAGAGAGGGGAAAAACATTGAGGTTGCTGAAACTCAAAGAAGAGGTGAAGGAATCCACCCAGATGTCCAGTTGTGGCTGACAAAAGTGGAGGAGATCACTGCAAAGACTGACCAATTCCTGAAAGATGAATGCAGCCAAGAAAATCTGAAATGCCTGCATGGGTTTCGCCCTAACCTGACCATGCTTCATCGGCTGAGCAGGAATTCTACAAAGCTGTTGCAGGAGTGGAATGATATTGTTTTGGACGACTTGTTGTACTATAGCGTGGGTTTGGGTTTTTTTGAAAAGCCCTACACAGTGGAGAGAGCACGAAATGCATTGTATTCGTGGGTTGAAAAACTCAAGGACTTTTGTCTGTTGGTAGAGAGCGATGATGATAGATATGTCACAATGCATGACCTTGTACGCAATGCTGCTAACCGGATTGCATCCAGAGATCCACAGATCTTAGCATTAGTGAAAGATGAAGATGAGGGTGGTTTGAAAGAATGGCCAGATAGAAGTTTCTTAGAGAAGTGCACAACCATCTCTTTGCCTTGTAACGGCAATTTTCCAAGCCTTCCGCAAGTTATGCAATGCCCAGCTCTAAGAATGTTTCTGTTGGAGGGTAATTCTAAACCGCTGGCAATAGCCCCTACATTATTTAAAGAGATGAAACAACTCAATGTTTTGAGTTGGATAAACATGGGCATAGGGTCTCTTCCTCAATCTCTTGGGCTCCTAGAGAATCTTCGGACACTTTGTTTACTATATTGCACATTGGACGAGATATCTATTGTTGGGCAGCTAAGAAACTTAGAAATTCTAAGCTTTGAAGGTTCTGATTTTGTACATCTGCCCCAAGAAATAGGGCAACTGGCTCATCTACGGTTGTTGGATCTATCCGGCTGCTGTAGACTTGAAGTGATATCACCTGGTGTTATATCAAGCTTGACAAGCCTGGAATGCTTGACAATGAAAAAAAGCTTTGACAATTGGGTGATTGAAGGTGAAAGAAACAATGCTAGCCTTTCAGAGCTGGAGCATTTGTCTCATTTAACTGCATTAGTAATACATGTTCCCGATGCAAATCTTCTTCCAGCTAACTTTTTCTTCCTTAAGCTAGAAAGATTCCAAATCATGATTGGTAAAACATGGGCGTGGGACGAGGACGAGGACGAGGAGGATGAGGATGAGGGTGAGGGTGAGGGTGAGGGTGAGGATGATGAGGATGATGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGATAAGTACCCATTCCTCAACAGACTAAAACTCCAGCTCACTACAAGCATTGAGTTGAACCAAGGTCTAAGAAAGTTGCTGAGGTTATGTGATGATTTGTCCTTGTATGGGACGGACAGTGTTAATCATATTGTCCACCAATTTGATAATGAAGATTTTCAGCAACTGAAACATCTCTGTCTCCGAAACAATGTCGACTTTATTATTACCAAGAAGGTTATGTTGCGGAACTTAAAGACTTTGGTGGTACATGAATGTGATAATATAAGATTCTTGTTCACCTTTTCTGTGGCTAAGAGTCTTGTACAACTCAAATGTTTAGAGATTTCTTCATGTAAACTGTTGAAAGAGATTGTATCATCGACAACAGAATGCGGTCGTGAAGAAAGTATGGGTAACATGTTTCCCAATCTGGAAGTTTTGAATCTAAAGGGACTCGAAAAGCTGGCTAGATTTTGCACGGGAAGTTATGTTGAATTTCCGTCCTTGAAAGAATTGGAAGTAGATGATTGTCCTGAACTACGGGCTTTCATTTGTGAGAATGTTGAGACGAGTACGAGCAGTACTCAAGGTATTATAATCGACGAAGAAACTGATGAGAGAGACTCGAAACAGGAAAAGGACCTTGATGTTAACAGGGAGACACTTGCACAATCCATCCTCTTTGACGAAAAGGTAGGATTTCCTCGCTTGGAGAGTTTGGTAATCAATGGGGTCCTGGAGTTGAAGACAATATGGCACTGCCAACAGGCTCAAGACTCTTTCGACACTCAAGAACGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

726

Amino Acids

83.24

Weight (kDa)

4.71

Isoelectric Point (pI)

45.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 310 - 403 9e-09 Leucine-rich repeat region
LRR_RPS2 PF23247 538 - 645 5e-14 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1976
AccI GTMKAC 2 cut(s) 1045, 1593
AciI CCGC 4 cut(s) 713, 770, 1624, 1773
AclI AACGTT 1 cut(s) 2176
AclWI GGATC 2 cut(s) 581, 1035
AcoI YGGCCR 1 cut(s) 641
AcsI RAATTY 3 cut(s) 352, 951, 1874
AdeI CACNNNGTG 1 cut(s) 1067
AfaI GTAC 9 cut(s) 53, 407, 555, 981, 1406, 1647, 1704, 1954, 1963
AfiI CCNNNNNNNGG 2 cut(s) 692, 1506
AflII CTTAAG 1 cut(s) 1247
AflIII ACRYGT 2 cut(s) 1204, 1797
AjiI CACGTC 1 cut(s) 74
AjnI CCWGG 3 cut(s) 1063, 1089, 2115
Alw21I GWGCWC 2 cut(s) 460, 671
Alw26I GTCTC 6 cut(s) 852, 1185, 1583, 1940, 1995, 2033
Alw44I GTGCAC 1 cut(s) 667
AlwI GGATC 2 cut(s) 581, 1035
AlwNI CAGNNNCTG 1 cut(s) 1564
Ama87I CYCGRG 1 cut(s) 126
AoxI GGCC 2 cut(s) 27, 641
ApaLI GTGCAC 1 cut(s) 667
ApeKI GCWGC 5 cut(s) 146, 282, 563, 934, 1038
ApoI RAATTY 3 cut(s) 352, 951, 1874
Asp700I GAANNNNTTC 1 cut(s) 1554
AspS9I GGNCC 3 cut(s) 27, 2020, 2113
AsuHPI GGTGA 9 cut(s) 206, 1053, 1141, 1151, 1340, 1346, 1352, 1358, 1669
AsuNHI GCTAGC 1 cut(s) 1154
AvaI CYCGRG 1 cut(s) 126
AvaII GGWCC 2 cut(s) 2020, 2113
BaeGI GKGCMC 1 cut(s) 671
BalI TGGCCA 1 cut(s) 643
BanII GRGCYC 1 cut(s) 870
BbsI GAAGAC 1 cut(s) 2132
Bbv12I GWGCWC 2 cut(s) 460, 671
BbvCI CCTCAGC 1 cut(s) 1478
BbvI GCAGC 5 cut(s) 133, 294, 550, 946, 1025
BccI CCATC 2 cut(s) 683, 2063
BceAI ACGGC 1 cut(s) 709
BcgI CGANNNNNNTGC 4 cut(s) 296, 330, 456, 490
BciT130I CCWGG 3 cut(s) 1065, 1091, 2117
BcoDI GTCTC 6 cut(s) 852, 1185, 1583, 1940, 1995, 2033
BfaI CTAG 5 cut(s) 150, 872, 1155, 1253, 1848
BfmI CTRYAG 2 cut(s) 409, 1042
BfrI CTTAAG 1 cut(s) 1247
BglII AGATCT 1 cut(s) 594
BisI GCNGC 5 cut(s) 147, 283, 564, 935, 1039
BlpI GCTNAGC 1 cut(s) 344
BlsI GCNGC 5 cut(s) 148, 284, 565, 936, 1040
BmcAI AGTACT 1 cut(s) 1963
Bme1390I CCNGG 3 cut(s) 1065, 1091, 2117
Bme18I GGWCC 2 cut(s) 2020, 2113
BmeT110I CYCGRG 1 cut(s) 126
BmgBI CACGTC 1 cut(s) 74
BmgT120I GGNCC 3 cut(s) 27, 2020, 2113
BmiI GGNNCC 2 cut(s) 869, 2114
BmrFI CCNGG 3 cut(s) 1065, 1091, 2117
BmsI GCATC 2 cut(s) 587, 1204
BmtI GCTAGC 1 cut(s) 1158
BoxI GACNNNNGTC 1 cut(s) 501
BpiI GAAGAC 1 cut(s) 2132
BplI GAGNNNNNCTC 4 cut(s) 1948, 1980, 1988, 2020
BpmI CTGGAG 4 cut(s) 140, 1190, 1415, 2138
Bpu10I CCTNAGC 1 cut(s) 1478
Bpu1102I GCTNAGC 1 cut(s) 344
BpuEI CTTGAG 4 cut(s) 476, 1950, 2136, 2154
BsaBI GATNNNNATC 1 cut(s) 1218
BsaI GGTCTC 1 cut(s) 852
BsaJI CCNNGG 1 cut(s) 1459
BsaWI WCCGGW 1 cut(s) 570
BsaXI ACNNNNNCTCC 6 cut(s) 1163, 1193, 1388, 1413, 1418, 1443
Bsc4I CCNNNNNNNGG 2 cut(s) 692, 1506
Bse1I ACTGG 3 cut(s) 123, 217, 1011
Bse3DI GCAATG 2 cut(s) 565, 731
Bse8I GATNNNNATC 1 cut(s) 1218
BseBI CCWGG 3 cut(s) 1065, 1091, 2117
BseDI CCNNGG 1 cut(s) 1459
BseGI GGATG 6 cut(s) 578, 1321, 1327, 1357, 1366, 2055
BseJI GATNNNNATC 1 cut(s) 1218
BseLI CCNNNNNNNGG 2 cut(s) 692, 1506
BseMI GCAATG 2 cut(s) 565, 731
BseMII CTCAG 2 cut(s) 335, 1469
BseNI ACTGG 3 cut(s) 123, 217, 1011
BseSI GKGCMC 1 cut(s) 671
BseXI GCAGC 5 cut(s) 133, 294, 550, 946, 1025
BseYI CCCAGC 1 cut(s) 730
Bsh1285I CGRYCG 1 cut(s) 1777
BshFI GGCC 2 cut(s) 29, 643
BsiEI CGRYCG 1 cut(s) 1777
BsiHKAI GWGCWC 2 cut(s) 460, 671
BsiHKCI CYCGRG 1 cut(s) 126
BsiSI CCGG 2 cut(s) 571, 1035
BslFI GGGAC 3 cut(s) 1307, 1522, 1845
BslI CCNNNNNNNGG 2 cut(s) 692, 1506
BsmAI GTCTC 6 cut(s) 852, 1185, 1583, 1940, 1995, 2033
BsmBI CGTCTC 1 cut(s) 1940
BsmFI GGGAC 3 cut(s) 1307, 1522, 1845
BsmI GAATGC 3 cut(s) 284, 1100, 1775
BsnI GGCC 2 cut(s) 29, 643
Bso31I GGTCTC 1 cut(s) 852
BsoBI CYCGRG 1 cut(s) 126
Bsp1286I GDGCHC 3 cut(s) 460, 671, 870
Bsp1407I TGTACA 2 cut(s) 979, 1702
Bsp143I GATC 4 cut(s) 243, 586, 594, 1027
Bsp1720I GCTNAGC 1 cut(s) 344
BspACI CCGC 4 cut(s) 713, 770, 1624, 1773
BspANI GGCC 2 cut(s) 29, 643
BspCNI CTCAG 2 cut(s) 336, 1470
BspHI TCATGA 1 cut(s) 1269
BspLI GGNNCC 2 cut(s) 869, 2114
BspOI GCTAGC 1 cut(s) 1158
BspPI GGATC 2 cut(s) 581, 1035
BspTI CTTAAG 1 cut(s) 1247
BspTNI GGTCTC 1 cut(s) 852
BsrDI GCAATG 2 cut(s) 565, 731
BsrGI TGTACA 2 cut(s) 979, 1702
BsrI ACTGG 3 cut(s) 123, 217, 1011
BssECI CCNNGG 1 cut(s) 1459
BssMI GATC 4 cut(s) 243, 586, 594, 1027
BssT1I CCWWGG 1 cut(s) 1459
Bst2UI CCWGG 3 cut(s) 1065, 1091, 2117
Bst4CI ACNGT 5 cut(s) 58, 448, 1020, 1517, 1740
Bst6I CTCTTC 2 cut(s) 184, 855
BstAFI CTTAAG 1 cut(s) 1247
BstAPI GCANNNNNTGC 2 cut(s) 464, 721
BstAUI TGTACA 2 cut(s) 979, 1702
BstC8I GCNNGC 4 cut(s) 305, 774, 1156, 1845
BstF5I GGATG 6 cut(s) 578, 1321, 1327, 1357, 1366, 2055
BstKTI GATC 4 cut(s) 246, 589, 597, 1030
BstMAI GTCTC 6 cut(s) 852, 1185, 1583, 1940, 1995, 2033
BstMBI GATC 4 cut(s) 243, 586, 594, 1027
BstMCI CGRYCG 1 cut(s) 1777
BstMWI GCNNNNNNNGC 5 cut(s) 340, 464, 721, 1086, 1095
BstNI CCWGG 3 cut(s) 1065, 1091, 2117
BstNSI RCATGY 2 cut(s) 1208, 1801
BstPAI GACNNNNGTC 1 cut(s) 501
BstSCI CCNGG 3 cut(s) 1063, 1089, 2115
BstSFI CTRYAG 2 cut(s) 409, 1042
BstSLI GKGCMC 1 cut(s) 671
BstV1I GCAGC 5 cut(s) 133, 294, 550, 946, 1025
BstV2I GAAGAC 1 cut(s) 2132
BstX2I RGATCY 3 cut(s) 586, 594, 1027
BstYI RGATCY 3 cut(s) 586, 594, 1027
BsuRI GGCC 2 cut(s) 29, 643
BtgZI GCGATG 1 cut(s) 534
BtrI CACGTC 1 cut(s) 74
BtsCI GGATG 6 cut(s) 578, 1321, 1327, 1357, 1366, 2055
BtsI GCAGTG 2 cut(s) 246, 2137
BtsIMutI CAGTG 4 cut(s) 246, 453, 1522, 2137
Cac8I GCNNGC 4 cut(s) 305, 774, 1156, 1845
CaiI CAGNNNCTG 1 cut(s) 1564
CciI TCATGA 1 cut(s) 1269
Cfr13I GGNCC 3 cut(s) 27, 2020, 2113
CsiI ACCWGGT 1 cut(s) 1063
Csp6I GTAC 9 cut(s) 52, 406, 554, 980, 1405, 1646, 1703, 1953, 1962
CviQI GTAC 9 cut(s) 52, 406, 554, 980, 1405, 1646, 1703, 1953, 1962
DpnI GATC 4 cut(s) 245, 588, 596, 1029
DpnII GATC 4 cut(s) 243, 586, 594, 1027
DraI TTTAAA 1 cut(s) 796
DraIII CACNNNGTG 1 cut(s) 1067
EaeI YGGCCR 1 cut(s) 641
Eam1104I CTCTTC 2 cut(s) 184, 855
EarI CTCTTC 2 cut(s) 184, 855
Eco130I CCWWGG 1 cut(s) 1459
Eco24I GRGCYC 1 cut(s) 870
Eco31I GGTCTC 1 cut(s) 852
Eco32I GATATC 2 cut(s) 921, 1059
Eco47I GGWCC 2 cut(s) 2020, 2113
Eco88I CYCGRG 1 cut(s) 126
EcoO109I RGGNCCY 2 cut(s) 2020, 2113
EcoRI GAATTC 1 cut(s) 352
EcoRII CCWGG 3 cut(s) 1063, 1089, 2115
EcoRV GATATC 2 cut(s) 921, 1059
EcoT14I CCWWGG 1 cut(s) 1459
EcoT22I ATGCAT 2 cut(s) 469, 546
EcoT38I GRGCYC 1 cut(s) 870
ErhI CCWWGG 1 cut(s) 1459
Esp3I CGTCTC 1 cut(s) 1940
FaqI GGGAC 3 cut(s) 1307, 1522, 1845
FblI GTMKAC 2 cut(s) 1045, 1593
Fnu4HI GCNGC 5 cut(s) 147, 283, 564, 935, 1039
FokI GGATG 6 cut(s) 565, 1328, 1334, 1364, 1373, 2042
FriOI GRGCYC 1 cut(s) 870
Fsp4HI GCNGC 5 cut(s) 147, 283, 564, 935, 1039
FspBI CTAG 5 cut(s) 150, 872, 1155, 1253, 1848
GluI GCNGC 5 cut(s) 147, 283, 564, 935, 1039
GsaI CCCAGC 1 cut(s) 734
GsuI CTGGAG 4 cut(s) 140, 1190, 1415, 2138
HaeIII GGCC 2 cut(s) 29, 643
HapII CCGG 2 cut(s) 571, 1035
HincII GTYRAC 2 cut(s) 1594, 2032
HindII GTYRAC 2 cut(s) 1594, 2032
HindIII AAGCTT 3 cut(s) 958, 1078, 1114
HinfI GANTC 9 cut(s) 201, 877, 1260, 1668, 1696, 1822, 1833, 2003, 2156
HpaI GTTAAC 1 cut(s) 2032
HpaII CCGG 2 cut(s) 571, 1035
HphI GGTGA 9 cut(s) 206, 1053, 1141, 1151, 1340, 1346, 1352, 1358, 1669
Hpy166II GTNNAC 9 cut(s) 54, 669, 896, 1046, 1534, 1594, 1677, 1736, 2032
Hpy188I TCNGA 5 cut(s) 297, 885, 973, 1165, 1583
Hpy188III TCNNGA 9 cut(s) 268, 582, 1211, 1270, 1778, 1811, 1913, 2153, 2171
Hpy8I GTNNAC 9 cut(s) 54, 669, 896, 1046, 1534, 1594, 1677, 1736, 2032
Hpy99I CGWCG 1 cut(s) 1985
HpyAV CCTTC 6 cut(s) 119, 191, 719, 959, 1130, 1606
HpyCH4III ACNGT 5 cut(s) 58, 448, 1020, 1517, 1740
HpyCH4IV ACGT 2 cut(s) 73, 2176
HpyF10VI GCNNNNNNNGC 5 cut(s) 340, 464, 721, 1086, 1095
HpySE526I ACGT 2 cut(s) 73, 2176
KspAI GTTAAC 1 cut(s) 2032
Kzo9I GATC 4 cut(s) 243, 586, 594, 1027
LmnI GCTCC 2 cut(s) 873, 1171
Lsp1109I GCAGC 5 cut(s) 133, 294, 550, 946, 1025
LweI GCATC 2 cut(s) 587, 1204
MabI ACCWGGT 1 cut(s) 1063
MaeI CTAG 5 cut(s) 150, 872, 1155, 1253, 1848
MaeII ACGT 2 cut(s) 73, 2176
MaeIII GTNAC 3 cut(s) 535, 689, 1793
MalI GATC 4 cut(s) 245, 588, 596, 1029
MboI GATC 4 cut(s) 243, 586, 594, 1027
MfeI CAATTG 3 cut(s) 18, 42, 1123
MflI RGATCY 3 cut(s) 586, 594, 1027
MhlI GDGCHC 3 cut(s) 460, 671, 870
MlsI TGGCCA 1 cut(s) 643
MluNI TGGCCA 1 cut(s) 643
MlyI GAGTC 4 cut(s) 1705, 1827, 1997, 2150
MmeI TCCRAC 3 cut(s) 732, 806, 1005
Mox20I TGGCCA 1 cut(s) 643
Mph1103I ATGCAT 2 cut(s) 469, 546
MroXI GAANNNNTTC 1 cut(s) 1554
MscI TGGCCA 1 cut(s) 643
MseI TTAA 7 cut(s) 795, 1187, 1248, 1521, 1631, 2031, 2179
MslI CAYNNNNRTG 3 cut(s) 210, 1288, 1653
Msp20I TGGCCA 1 cut(s) 643
MspA1I CMGCKG 1 cut(s) 772
MspCI CTTAAG 1 cut(s) 1247
MspI CCGG 2 cut(s) 571, 1035
MspR9I CCNGG 3 cut(s) 1065, 1091, 2117
MunI CAATTG 3 cut(s) 18, 42, 1123
Mva1269I GAATGC 3 cut(s) 284, 1100, 1775
MvaI CCWGG 3 cut(s) 1065, 1091, 2117
MwoI GCNNNNNNNGC 5 cut(s) 340, 464, 721, 1086, 1095
NdeII GATC 4 cut(s) 243, 586, 594, 1027
NheI GCTAGC 1 cut(s) 1154
NlaIV GGNNCC 2 cut(s) 869, 2114
NmuCI GTSAC 1 cut(s) 535
NsiI ATGCAT 2 cut(s) 469, 546
NspI RCATGY 2 cut(s) 1208, 1801
PaeR7I CTCGAG 1 cut(s) 126
PagI TCATGA 1 cut(s) 1269
PciI ACATGT 2 cut(s) 1204, 1797
PctI GAATGC 3 cut(s) 284, 1100, 1775
PdmI GAANNNNTTC 1 cut(s) 1554
PfeI GAWTC 5 cut(s) 201, 877, 1260, 1668, 1822
PfoI TCCNGGA 1 cut(s) 2115
PkrI GCNGC 5 cut(s) 148, 284, 565, 936, 1040
PleI GAGTC 4 cut(s) 1704, 1827, 1997, 2150
PpsI GAGTC 4 cut(s) 1704, 1827, 1997, 2150
PpuMI RGGWCCY 2 cut(s) 2020, 2113
PscI ACATGT 2 cut(s) 1204, 1797
PshAI GACNNNNGTC 1 cut(s) 501
PsiI TTATAA 1 cut(s) 1976
Psp1406I AACGTT 1 cut(s) 2176
Psp5II RGGWCCY 2 cut(s) 2020, 2113
Psp6I CCWGG 3 cut(s) 1063, 1089, 2115
PspFI CCCAGC 1 cut(s) 730
PspGI CCWGG 3 cut(s) 1063, 1089, 2115
PspN4I GGNNCC 2 cut(s) 869, 2114
PspPI GGNCC 3 cut(s) 27, 2020, 2113
PspPPI RGGWCCY 2 cut(s) 2020, 2113
PspXI VCTCGAGB 1 cut(s) 126
PsrI GAACNNNNNNTAC 2 cut(s) 1191, 1223
PstNI CAGNNNCTG 1 cut(s) 1564
PsuI RGATCY 3 cut(s) 586, 594, 1027
RsaI GTAC 9 cut(s) 53, 407, 555, 981, 1406, 1647, 1704, 1954, 1963
RsaNI GTAC 9 cut(s) 52, 406, 554, 980, 1405, 1646, 1703, 1953, 1962
RseI CAYNNNNRTG 3 cut(s) 210, 1288, 1653
SalI GTCGAC 1 cut(s) 1592
SaqAI TTAA 7 cut(s) 795, 1187, 1248, 1521, 1631, 2031, 2179
SatI GCNGC 5 cut(s) 147, 283, 564, 935, 1039
Sau3AI GATC 4 cut(s) 243, 586, 594, 1027
Sau96I GGNCC 3 cut(s) 27, 2020, 2113
ScaI AGTACT 1 cut(s) 1963
SchI GAGTC 4 cut(s) 1705, 1827, 1997, 2150
ScrFI CCNGG 3 cut(s) 1065, 1091, 2117
SduI GDGCHC 3 cut(s) 460, 671, 870
SexAI ACCWGGT 1 cut(s) 1063
SfaNI GCATC 2 cut(s) 587, 1204
SfcI CTRYAG 2 cut(s) 409, 1042
Sfr274I CTCGAG 1 cut(s) 126
SinI GGWCC 2 cut(s) 2020, 2113
SlaI CTCGAG 1 cut(s) 126
SmiMI CAYNNNNRTG 3 cut(s) 210, 1288, 1653
SmlI CTYRAG 6 cut(s) 126, 491, 1247, 1965, 2151, 2169
SmoI CTYRAG 6 cut(s) 126, 491, 1247, 1965, 2151, 2169
SsiI CCGC 4 cut(s) 713, 770, 1624, 1773
SspMI CTAG 5 cut(s) 150, 872, 1155, 1253, 1848
StyD4I CCNGG 3 cut(s) 1063, 1089, 2115
StyI CCWWGG 1 cut(s) 1459
TaaI ACNGT 5 cut(s) 58, 448, 1020, 1517, 1740
TaiI ACGT 2 cut(s) 76, 2179
TaqI TCGA 7 cut(s) 127, 1593, 1760, 1836, 1980, 2006, 2163
TatI WGTACW 4 cut(s) 405, 979, 1702, 1961
TfiI GAWTC 5 cut(s) 201, 877, 1260, 1668, 1822
Tru1I TTAA 7 cut(s) 795, 1187, 1248, 1521, 1631, 2031, 2179
Tru9I TTAA 7 cut(s) 795, 1187, 1248, 1521, 1631, 2031, 2179
TscAI CASTG 4 cut(s) 253, 453, 1522, 2144
TseFI GTSAC 1 cut(s) 535
TseI GCWGC 5 cut(s) 146, 282, 563, 934, 1038
Tsp45I GTSAC 1 cut(s) 535
TspDTI ATGAA 9 cut(s) 291, 326, 630, 818, 1121, 1563, 1665, 1719, 1918
TspGWI ACGGA 2 cut(s) 1526, 1869
TspRI CASTG 4 cut(s) 253, 453, 1522, 2144
Vha464I CTTAAG 1 cut(s) 1247
VneI GTGCAC 1 cut(s) 667
VpaK11BI GGWCC 2 cut(s) 2020, 2113
XapI RAATTY 3 cut(s) 352, 951, 1874
XceI RCATGY 2 cut(s) 1208, 1801
XcmI CCANNNNNNNNNTGG 1 cut(s) 1271
XhoI CTCGAG 1 cut(s) 126
XmiI GTMKAC 2 cut(s) 1045, 1593
XmnI GAANNNNTTC 1 cut(s) 1554
XspI CTAG 5 cut(s) 150, 872, 1155, 1253, 1848
ZrmI AGTACT 1 cut(s) 1963
Zsp2I ATGCAT 2 cut(s) 469, 546
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.