Rh4BG081500

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
Physical Location & Seq
Reverse (-)
14205979 .. 14229781
23803 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG081500.1

Sequence Viewer

Length: 2286 bp
ATGATGGCTCCAATTAGGAAGTATCCTTCTGGGGTTAAAAAAAGAAAAGAGAAGCAAAAGAGAGAGGCATTGGTTAAGCTTCAAGCCGGATCCCTTCACATGTGGTTTCTTGCTGCAATTACTGGAGTTGTTGGAAAGATTGCCGAGTTCACAGTTCCACCAGTTATACGCCGAGTGGGTTATGTAATCCACTACAACAAGAACCTCAAAAAACTAGAGAGTCAAGTAGATGACTTGGGTGCTGCCAGTGAAAGCATGAAGCGTGCTGTTGAAACAGAGGAAAGAAAAGATGCTAACATCGTTCCAGCAGATTTGTTCACCACTAGTGAGTTAAAGAGATTCCAAATATGTATTGGTTCTGCGTGGAAATGGGATAATGTGGATGAAGCCCTCAATGTACTAAAGCTCCGACTCACCGGTAGCAATGAATTGGACCAAGGTCTAAGAATGTTGCTAAAAAGAACTGAAGACTTGTACTTGGAGGGGACGGAGGCTGTTAATAATAGTATTGTCTATCAAATAGGTGTCGAAGGTTTTCAGAAATTGAAGCATCTCCATCTCCAAACGACTACCGAGTTTACGTATATCATAAATGGGAAGGTTAGGTATCCCAACTTGACATGGTTGGCGGTGAATGAACTCAATGGTTTAACATTCTTGTTATCATCTTCAATGGCTAGAAGCCTTGCACAACTCAAATGTCTTCAGGTATCAAGATGTCAAATAATGGAAGAGATAGTATCAATAGAAGAATCTGATGAAGAAATTGTAGACAACTTCTTTTGCCAGCTACAAATTCTGGAGCTAAAAGACCTTCCAAATCTCACTAAATTCTGCTCAAGAAACCAAACTGAACTTTCAAATCCATCCTCTGGGATACAACACTTTCTTTTTGACAATAAGGTAGAGTTTCCAAACTTGAAGAAGTTATCCATTGATGGCCTAGCAAACTTGACGACAATATGGAACAATCAATTTTCTCTAGAGAGTTCAAAAAATCTAGAGATAATTGAAATTGTTTCATGTGACAGTTTGAAAAGTATTTTTCCGGTTTTGGTGGCTAGAAATCTCCAGCAGTTAAAAAGGCTGATAGTGAAGAGTTGTGGAGCTCAGGAAATTGTCGCAAAGGAAGAGTCACTACAAACAACACCTAAGTTTGTGTTTCCAAAAGTAACAGAAGTGATTTTTAGTGATATGTCACAACTCAAGAATTTCTACCCAGGAATGCATGTGTCCAGCTGGCCGTCTCTTAATGAGTTGAGGGTGGTAGAGTGTGCTAAAGTCAACGTGTTTGCCGAGGAAATCTCAAGTTTTCAAGAACATAATGAGCCGGAACGTCTTAGTGTTCTTATCTCGCAGTCTCTCTTTTTAATTGAGAAGGATTCATTTCCCAACTTGGAATGGTTGTTCGTGAGAGCAATGGAGCCACTCCCAGCAGCAGCAGTGCAATTGTTTAGCAAACTAAAGCATCTTGAGGTTTGTTGTCCGGAGTCCAAGTCACTTGTTTTCCTTGACAAATTACTAGACTCAGAAGGAAACAGCAATAGTAGTGCAGTTGGGATTGGGGCCCAGCAGCTCCCACATTTAAAAGAGTTGTGGCTTCGAAGAATGGAGAAGCTGACTCATCTAGGCCAAGATGATGAAGAGGAAAACTTACAATCAGCCCCCCGCATCCCAAATTTTCCCAACTTGGAAATTCTATACGTGAATGGTTGCGACAGCTTAAGGAATCTTAGATCATCAGCAATTTCCTTTAACACTCTAACAACTTTGCAAGTAAATGTTTGCAAGGGGCTGAAATACTTGATAACTTACTCCATGGCCAAAAGTTTAACGCAGCTCACAGAATTGGAAGTTGTGGAGTGTAAGAGACTGGTATATATAGTGGCAAGCAATGAAGATGACGATTCATTAGCAAATTATGAGATTACATTCAGGCGGCTGAAACATTTGAAACTATCAAGTCTACCAAGAATGCAAGGCTTTTGCTCCGGAAATTGCATTGCTAAATTCCCGTCCTTGAAAACTTCAAGCATGAGCAACCGCCTCAAATTGAAGATTTTCGAAGCTCATAACCAAACGCTACAGAAAACAGACGAAGAGGCAGACACAGATGTCGATTACTTCGATTTCACTACACTATCAGAGGGGAGCTCATATGGAATTGTTGCTTCTGAAGTTTTGTCAGAGCTAAAATCAAATGGACAAGTTGTGGATGAAAGTCTGTTCAAAGATGGCAAGATAGATGTGACTGAGGTACAAATAGACGGTTCAATGCAGAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

761

Amino Acids

86.09

Weight (kDa)

5.77

Isoelectric Point (pI)

47.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_RPS2 PF23247 183 - 285 2.6e-10 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 303 - 369 2.3e-15 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 456 - 580 2.8e-08 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 579 - 679 2.1e-10 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2114
AccB7I CCANNNNNTGG 1 cut(s) 872
AccI GTMKAC 2 cut(s) 771, 1966
AccIII TCCGGA 2 cut(s) 1486, 1991
AciI CCGC 4 cut(s) 629, 1669, 1939, 2044
AclWI GGATC 2 cut(s) 84, 97
AcoI YGGCCR 2 cut(s) 1241, 1821
AcsI RAATTY 6 cut(s) 795, 830, 1210, 1678, 1695, 2009
AcuI CTGAAG 3 cut(s) 486, 689, 2196
AfaI GTAC 3 cut(s) 399, 476, 2259
AfiI CCNNNNNNNGG 1 cut(s) 872
AflII CTTAAG 1 cut(s) 1723
AflIII ACRYGT 2 cut(s) 99, 1287
AgeI ACCGGT 1 cut(s) 416
AhlI ACTAGT 1 cut(s) 323
AjnI CCWGG 1 cut(s) 1219
AloI GAACNNNNNNTCC 2 cut(s) 1391, 1423
Alw21I GWGCWC 2 cut(s) 1111, 2156
Alw26I GTCTC 3 cut(s) 1251, 1365, 1864
AlwI GGATC 2 cut(s) 84, 97
Aor13HI TCCGGA 2 cut(s) 1486, 1991
AoxI GGCC 5 cut(s) 940, 1241, 1566, 1630, 1821
ApaI GGGCCC 1 cut(s) 1570
ApeKI GCWGC 6 cut(s) 113, 242, 1436, 1439, 1573, 1837
ApoI RAATTY 6 cut(s) 795, 830, 1210, 1678, 1695, 2009
ArsI GACNNNNNNTTYG 2 cut(s) 1118, 1150
AsiGI ACCGGT 1 cut(s) 416
Asp700I GAANNNNTTC 2 cut(s) 534, 2060
AspS9I GGNCC 3 cut(s) 433, 1566, 1567
AsuHPI GGTGA 3 cut(s) 310, 406, 643
AsuII TTCGAA 2 cut(s) 1603, 2064
AvaII GGWCC 1 cut(s) 433
BaeGI GKGCMC 1 cut(s) 1570
BalI TGGCCA 1 cut(s) 1823
BamHI GGATCC 1 cut(s) 89
BanII GRGCYC 3 cut(s) 1111, 1570, 2156
BarI GAAGNNNNNNTAC 2 cut(s) 1122, 1154
BbsI GAAGAC 2 cut(s) 474, 695
Bbv12I GWGCWC 2 cut(s) 1111, 2156
BbvI GCAGC 6 cut(s) 100, 229, 1448, 1451, 1585, 1849
BccI CCATC 4 cut(s) 564, 874, 932, 2228
BceAI ACGGC 1 cut(s) 1228
BciT130I CCWGG 1 cut(s) 1221
BciVI GTATCC 3 cut(s) 33, 618, 870
BcoDI GTCTC 3 cut(s) 1251, 1365, 1864
BcuI ACTAGT 1 cut(s) 323
BfaI CTAG 9 cut(s) 215, 324, 678, 944, 983, 1001, 1062, 1523, 1628
BfmI CTRYAG 1 cut(s) 2084
BfrI CTTAAG 1 cut(s) 1723
BfuI GTATCC 3 cut(s) 33, 618, 870
BisI GCNGC 7 cut(s) 114, 243, 1437, 1440, 1574, 1838, 1940
BlsI GCNGC 7 cut(s) 115, 244, 1438, 1441, 1575, 1839, 1941
Bme1390I CCNGG 1 cut(s) 1221
Bme18I GGWCC 1 cut(s) 433
BmgT120I GGNCC 3 cut(s) 433, 1566, 1567
BmiI GGNNCC 5 cut(s) 9, 91, 1425, 1567, 1568
BmrFI CCNGG 1 cut(s) 1221
BmsI GCATC 4 cut(s) 280, 559, 1477, 1680
BoxI GACNNNNGTC 1 cut(s) 438
BpiI GAAGAC 2 cut(s) 474, 695
BplI GAGNNNNNCTC 4 cut(s) 1289, 1321, 2138, 2170
BpmI CTGGAG 3 cut(s) 144, 821, 1055
Bpu10I CCTNAGC 1 cut(s) 1110
Bpu14I TTCGAA 2 cut(s) 1603, 2064
BpuEI CTTGAG 4 cut(s) 823, 1190, 1291, 1493
BsaAI YACGTR 2 cut(s) 582, 1705
BsaJI CCNNGG 4 cut(s) 436, 1219, 1296, 1818
BsaWI WCCGGW 4 cut(s) 416, 1048, 1486, 1991
BsaXI ACNNNNNCTCC 4 cut(s) 390, 420, 1481, 1511
Bsc4I CCNNNNNNNGG 1 cut(s) 872
Bse118I RCCGGY 1 cut(s) 416
Bse1I ACTGG 4 cut(s) 127, 161, 246, 1878
Bse3DI GCAATG 4 cut(s) 430, 1425, 1900, 2001
BseAI TCCGGA 2 cut(s) 1486, 1991
BseBI CCWGG 1 cut(s) 1221
BseDI CCNNGG 4 cut(s) 436, 1219, 1296, 1818
BseGI GGATG 4 cut(s) 388, 866, 1671, 2221
BseLI CCNNNNNNNGG 1 cut(s) 872
BseMI GCAATG 4 cut(s) 430, 1425, 1900, 2001
BseMII CTCAG 3 cut(s) 1124, 1542, 2244
BseNI ACTGG 4 cut(s) 127, 161, 246, 1878
BseSI GKGCMC 1 cut(s) 1570
BseXI GCAGC 6 cut(s) 100, 229, 1448, 1451, 1585, 1849
BseYI CCCAGC 2 cut(s) 1432, 1569
BsgI GTGCAG 1 cut(s) 1572
BshFI GGCC 5 cut(s) 942, 1243, 1568, 1632, 1823
BshTI ACCGGT 1 cut(s) 416
BsiHKAI GWGCWC 2 cut(s) 1111, 2156
BsiSI CCGG 6 cut(s) 87, 417, 1049, 1331, 1487, 1992
BslFI GGGAC 1 cut(s) 499
BslI CCNNNNNNNGG 1 cut(s) 872
BsmAI GTCTC 3 cut(s) 1251, 1365, 1864
BsmBI CGTCTC 1 cut(s) 1251
BsmFI GGGAC 1 cut(s) 499
BsmI GAATGC 2 cut(s) 1230, 1980
BsnI GGCC 5 cut(s) 942, 1243, 1568, 1632, 1823
Bsp119I TTCGAA 2 cut(s) 1603, 2064
Bsp120I GGGCCC 1 cut(s) 1566
Bsp1286I GDGCHC 3 cut(s) 1111, 1570, 2156
Bsp13I TCCGGA 2 cut(s) 1486, 1991
Bsp143I GATC 2 cut(s) 89, 1736
Bsp19I CCATGG 1 cut(s) 1818
BspACI CCGC 4 cut(s) 629, 1669, 1939, 2044
BspANI GGCC 5 cut(s) 942, 1243, 1568, 1632, 1823
BspCNI CTCAG 3 cut(s) 1123, 1541, 2245
BspEI TCCGGA 2 cut(s) 1486, 1991
BspLI GGNNCC 5 cut(s) 9, 91, 1425, 1567, 1568
BspPI GGATC 2 cut(s) 84, 97
BspT104I TTCGAA 2 cut(s) 1603, 2064
BspTI CTTAAG 1 cut(s) 1723
BsrDI GCAATG 4 cut(s) 430, 1425, 1900, 2001
BsrFI RCCGGY 1 cut(s) 416
BsrI ACTGG 4 cut(s) 127, 161, 246, 1878
BssAI RCCGGY 1 cut(s) 416
BssECI CCNNGG 4 cut(s) 436, 1219, 1296, 1818
BssMI GATC 2 cut(s) 89, 1736
BssT1I CCWWGG 2 cut(s) 436, 1818
Bst2UI CCWGG 1 cut(s) 1221
Bst4CI ACNGT 3 cut(s) 154, 1031, 2270
Bst6I CTCTTC 5 cut(s) 726, 1091, 1125, 1638, 2094
BstAFI CTTAAG 1 cut(s) 1723
BstBAI YACGTR 2 cut(s) 582, 1705
BstBI TTCGAA 2 cut(s) 1603, 2064
BstC8I GCNNGC 4 cut(s) 264, 788, 1241, 1891
BstDEI CTNAG 7 cut(s) 443, 1110, 1152, 1340, 1528, 1733, 2253
BstDSI CCRYGG 1 cut(s) 1818
BstF5I GGATG 4 cut(s) 388, 866, 1671, 2221
BstKTI GATC 2 cut(s) 92, 1739
BstMAI GTCTC 3 cut(s) 1251, 1365, 1864
BstMBI GATC 2 cut(s) 89, 1736
BstNI CCWGG 1 cut(s) 1221
BstNSI RCATGY 2 cut(s) 103, 1232
BstPAI GACNNNNGTC 1 cut(s) 438
BstSCI CCNGG 1 cut(s) 1219
BstSFI CTRYAG 1 cut(s) 2084
BstSLI GKGCMC 1 cut(s) 1570
BstSNI TACGTA 1 cut(s) 582
BstV1I GCAGC 6 cut(s) 100, 229, 1448, 1451, 1585, 1849
BstV2I GAAGAC 2 cut(s) 474, 695
BstX2I RGATCY 1 cut(s) 89
BstYI RGATCY 1 cut(s) 89
BsuI GTATCC 3 cut(s) 33, 618, 870
BsuRI GGCC 5 cut(s) 942, 1243, 1568, 1632, 1823
BtgI CCRYGG 1 cut(s) 1818
BtsCI GGATG 4 cut(s) 388, 866, 1671, 2221
BtsI GCAGTG 1 cut(s) 1449
BtsIMutI CAGTG 2 cut(s) 253, 1449
Cac8I GCNNGC 4 cut(s) 264, 788, 1241, 1891
Cfr10I RCCGGY 1 cut(s) 416
Cfr13I GGNCC 3 cut(s) 433, 1566, 1567
Csp6I GTAC 3 cut(s) 398, 475, 2258
CspAI ACCGGT 1 cut(s) 416
CviAII CATG 7 cut(s) 100, 256, 621, 1023, 1229, 1819, 2035
CviQI GTAC 3 cut(s) 398, 475, 2258
DdeI CTNAG 7 cut(s) 443, 1110, 1152, 1340, 1528, 1733, 2253
DpnI GATC 2 cut(s) 91, 1738
DpnII GATC 2 cut(s) 89, 1736
DraI TTTAAA 1 cut(s) 1587
DrdI GACNNNNNNGTC 1 cut(s) 2114
DseDI GACNNNNNNGTC 1 cut(s) 2114
EaeI YGGCCR 2 cut(s) 1241, 1821
Eam1104I CTCTTC 5 cut(s) 726, 1091, 1125, 1638, 2094
EarI CTCTTC 5 cut(s) 726, 1091, 1125, 1638, 2094
Ecl136II GAGCTC 2 cut(s) 1109, 2154
Eco105I TACGTA 1 cut(s) 582
Eco130I CCWWGG 2 cut(s) 436, 1818
Eco24I GRGCYC 3 cut(s) 1111, 1570, 2156
Eco47I GGWCC 1 cut(s) 433
Eco53kI GAGCTC 2 cut(s) 1109, 2154
Eco57I CTGAAG 3 cut(s) 486, 689, 2196
EcoICRI GAGCTC 2 cut(s) 1109, 2154
EcoO109I RGGNCCY 1 cut(s) 1566
EcoRII CCWGG 1 cut(s) 1219
EcoT14I CCWWGG 2 cut(s) 436, 1818
EcoT22I ATGCAT 1 cut(s) 1230
EcoT38I GRGCYC 3 cut(s) 1111, 1570, 2156
ErhI CCWWGG 2 cut(s) 436, 1818
Esp3I CGTCTC 1 cut(s) 1251
FaeI CATG 7 cut(s) 103, 259, 624, 1026, 1232, 1822, 2038
FaqI GGGAC 1 cut(s) 499
FatI CATG 7 cut(s) 99, 255, 620, 1022, 1228, 1818, 2034
FauI CCCGC 1 cut(s) 1676
FauNDI CATATG 1 cut(s) 2158
FblI GTMKAC 2 cut(s) 771, 1966
Fnu4HI GCNGC 7 cut(s) 114, 243, 1437, 1440, 1574, 1838, 1940
FokI GGATG 4 cut(s) 395, 853, 1658, 2228
FriOI GRGCYC 3 cut(s) 1111, 1570, 2156
Fsp4HI GCNGC 7 cut(s) 114, 243, 1437, 1440, 1574, 1838, 1940
FspBI CTAG 9 cut(s) 215, 324, 678, 944, 983, 1001, 1062, 1523, 1628
GluI GCNGC 7 cut(s) 114, 243, 1437, 1440, 1574, 1838, 1940
GsaI CCCAGC 2 cut(s) 1436, 1573
GsuI CTGGAG 3 cut(s) 144, 821, 1055
HaeIII GGCC 5 cut(s) 942, 1243, 1568, 1632, 1823
HapII CCGG 6 cut(s) 87, 417, 1049, 1331, 1487, 1992
Hin1II CATG 7 cut(s) 103, 259, 624, 1026, 1232, 1822, 2038
HincII GTYRAC 1 cut(s) 1285
HindII GTYRAC 1 cut(s) 1285
HindIII AAGCTT 1 cut(s) 77
HpaII CCGG 6 cut(s) 87, 417, 1049, 1331, 1487, 1992
HphI GGTGA 3 cut(s) 310, 406, 643
Hpy166II GTNNAC 6 cut(s) 150, 318, 579, 772, 1285, 1967
Hpy188I TCNGA 7 cut(s) 410, 540, 757, 1531, 2146, 2176, 2188
Hpy8I GTNNAC 6 cut(s) 150, 318, 579, 772, 1285, 1967
HpyAV CCTTC 7 cut(s) 36, 104, 524, 592, 824, 1372, 1526
HpyCH4III ACNGT 3 cut(s) 154, 1031, 2270
HpyCH4IV ACGT 4 cut(s) 581, 1287, 1336, 1704
HpyF3I CTNAG 7 cut(s) 443, 1110, 1152, 1340, 1528, 1733, 2253
HpySE526I ACGT 4 cut(s) 581, 1287, 1336, 1704
Hsp92II CATG 7 cut(s) 103, 259, 624, 1026, 1232, 1822, 2038
Kpn2I TCCGGA 2 cut(s) 1486, 1991
Kzo9I GATC 2 cut(s) 89, 1736
LmnI GCTCC 8 cut(s) 13, 411, 802, 1106, 1423, 1581, 1994, 2151
Lsp1109I GCAGC 6 cut(s) 100, 229, 1448, 1451, 1585, 1849
LweI GCATC 4 cut(s) 280, 559, 1477, 1680
MaeI CTAG 9 cut(s) 215, 324, 678, 944, 983, 1001, 1062, 1523, 1628
MaeII ACGT 4 cut(s) 581, 1287, 1336, 1704
MaeIII GTNAC 6 cut(s) 1025, 1134, 1171, 1197, 1497, 2248
MalI GATC 2 cut(s) 91, 1738
MboI GATC 2 cut(s) 89, 1736
MfeI CAATTG 1 cut(s) 1448
MflI RGATCY 1 cut(s) 89
MhlI GDGCHC 3 cut(s) 1111, 1570, 2156
MlsI TGGCCA 1 cut(s) 1823
MluNI TGGCCA 1 cut(s) 1823
MlyI GAGTC 6 cut(s) 229, 405, 1142, 1499, 1520, 1615
MmeI TCCRAC 2 cut(s) 112, 433
Mox20I TGGCCA 1 cut(s) 1823
Mph1103I ATGCAT 1 cut(s) 1230
MroI TCCGGA 2 cut(s) 1486, 1991
MroXI GAANNNNTTC 2 cut(s) 534, 2060
MscI TGGCCA 1 cut(s) 1823
Msp20I TGGCCA 1 cut(s) 1823
MspA1I CMGCKG 1 cut(s) 1239
MspCI CTTAAG 1 cut(s) 1723
MspI CCGG 6 cut(s) 87, 417, 1049, 1331, 1487, 1992
MspR9I CCNGG 1 cut(s) 1221
MunI CAATTG 1 cut(s) 1448
Mva1269I GAATGC 2 cut(s) 1230, 1980
MvaI CCWGG 1 cut(s) 1221
NcoI CCATGG 1 cut(s) 1818
NdeI CATATG 1 cut(s) 2158
NdeII GATC 2 cut(s) 89, 1736
NlaIII CATG 7 cut(s) 103, 259, 624, 1026, 1232, 1822, 2038
NlaIV GGNNCC 5 cut(s) 9, 91, 1425, 1567, 1568
NmeAIII GCCGAG 3 cut(s) 169, 197, 1321
NmuCI GTSAC 5 cut(s) 1025, 1134, 1197, 1497, 2248
NsiI ATGCAT 1 cut(s) 1230
NspI RCATGY 2 cut(s) 103, 1232
NspV TTCGAA 2 cut(s) 1603, 2064
PciI ACATGT 1 cut(s) 99
PcsI WCGNNNNNNNCGW 2 cut(s) 1293, 2124
PctI GAATGC 2 cut(s) 1230, 1980
PdmI GAANNNNTTC 2 cut(s) 534, 2060
PfeI GAWTC 5 cut(s) 339, 752, 1382, 1729, 1907
PflMI CCANNNNNTGG 1 cut(s) 872
PinAI ACCGGT 1 cut(s) 416
PkrI GCNGC 7 cut(s) 115, 244, 1438, 1441, 1575, 1839, 1941
PleI GAGTC 6 cut(s) 228, 405, 1141, 1498, 1520, 1615
PpsI GAGTC 6 cut(s) 228, 405, 1141, 1498, 1520, 1615
Ppu21I YACGTR 2 cut(s) 582, 1705
PscI ACATGT 1 cut(s) 99
PshAI GACNNNNGTC 1 cut(s) 438
Psp124BI GAGCTC 2 cut(s) 1111, 2156
Psp6I CCWGG 1 cut(s) 1219
PspFI CCCAGC 2 cut(s) 1432, 1569
PspGI CCWGG 1 cut(s) 1219
PspN4I GGNNCC 5 cut(s) 9, 91, 1425, 1567, 1568
PspOMI GGGCCC 1 cut(s) 1566
PspPI GGNCC 3 cut(s) 433, 1566, 1567
PsuI RGATCY 1 cut(s) 89
PvuII CAGCTG 1 cut(s) 1239
RsaI GTAC 3 cut(s) 399, 476, 2259
RsaNI GTAC 3 cut(s) 398, 475, 2258
SacI GAGCTC 2 cut(s) 1111, 2156
SatI GCNGC 7 cut(s) 114, 243, 1437, 1440, 1574, 1838, 1940
Sau3AI GATC 2 cut(s) 89, 1736
Sau96I GGNCC 3 cut(s) 433, 1566, 1567
SchI GAGTC 6 cut(s) 229, 405, 1142, 1499, 1520, 1615
ScrFI CCNGG 1 cut(s) 1221
SduI GDGCHC 3 cut(s) 1111, 1570, 2156
SfaNI GCATC 4 cut(s) 280, 559, 1477, 1680
SfcI CTRYAG 1 cut(s) 2084
SfuI TTCGAA 2 cut(s) 1603, 2064
SinI GGWCC 1 cut(s) 433
SmlI CTYRAG 5 cut(s) 838, 1205, 1306, 1472, 1723
SmoI CTYRAG 5 cut(s) 838, 1205, 1306, 1472, 1723
SnaBI TACGTA 1 cut(s) 582
SpeI ACTAGT 1 cut(s) 323
SsiI CCGC 4 cut(s) 629, 1669, 1939, 2044
SspMI CTAG 9 cut(s) 215, 324, 678, 944, 983, 1001, 1062, 1523, 1628
SstI GAGCTC 2 cut(s) 1111, 2156
StyD4I CCNGG 1 cut(s) 1219
StyI CCWWGG 2 cut(s) 436, 1818
TaaI ACNGT 3 cut(s) 154, 1031, 2270
TaiI ACGT 4 cut(s) 584, 1290, 1339, 1707
TaqI TCGA 5 cut(s) 528, 1603, 2064, 2118, 2127
TatI WGTACW 2 cut(s) 397, 474
TauI GCSGC 1 cut(s) 1942
TfiI GAWTC 5 cut(s) 339, 752, 1382, 1729, 1907
TscAI CASTG 2 cut(s) 253, 1449
TseFI GTSAC 5 cut(s) 1025, 1134, 1197, 1497, 2248
TseI GCWGC 6 cut(s) 113, 242, 1436, 1439, 1573, 1837
Tsp45I GTSAC 5 cut(s) 1025, 1134, 1197, 1497, 2248
TspGWI ACGGA 1 cut(s) 503
TspRI CASTG 2 cut(s) 253, 1449
Van91I CCANNNNNTGG 1 cut(s) 872
Vha464I CTTAAG 1 cut(s) 1723
VpaK11BI GGWCC 1 cut(s) 433
XapI RAATTY 6 cut(s) 795, 830, 1210, 1678, 1695, 2009
XbaI TCTAGA 2 cut(s) 982, 1000
XceI RCATGY 2 cut(s) 103, 1232
XcmI CCANNNNNNNNNTGG 1 cut(s) 350
XmiI GTMKAC 2 cut(s) 771, 1966
XmnI GAANNNNTTC 2 cut(s) 534, 2060
XspI CTAG 9 cut(s) 215, 324, 678, 944, 983, 1001, 1062, 1523, 1628
Zsp2I ATGCAT 1 cut(s) 1230
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.