Rmu_sc0004527.1_g000001

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004527.1
Physical Location & Seq
Forward (+)
328 .. 4134
3807 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004527.1_g000001.1.cds

Sequence Viewer

Length: 2919 bp
atggctagaagccttgcacaactcaaacgtcttcaagtatcaggatgtcagataatggaagagatagtatcaataaaagaatctgatgaagaaattgcagacaacttcttttgccagctacaaattctggagctaaaagaccttccaaatctcactaaattctgctcaagaaattacactgaactttcaaatccatcctctgggatacaacaccttctatttgacaataaggtagagtttccaaacttgaagaagttatccattgatggcctagcaaagttggcaagaatatggaacaatcaacttgctctagagagtacaaaaaatctagagacaatagaaattgtttcgtgtgacaatttgaaaagtatttttccagcgtcagtggctagtcttcaacagttgaagagcctaacagttacaaattgtggggtggaggaagtcgtttcaaaagaggacgatgtacaaacaacacctttgtttgttttctcaaaactaacatatgtgagattttacaatttgcccaatcttgggagtttctatccaggaacgtatgcttgcaactggccgtcagtcaaaactttatctgtgtatgattgtactaaagtgcagatatttgcggacgctatgcgtgagttgaataatctttgcacttcaagtaaacaatctctgtttttactcgagaaggattcattccccaacttggaatttttggggttggacgtacgggagaattggggtagtgtgccactccacttgcttatgaagctaaaatctctttgtacctgtgcatatacaaactcctctttgaattcccttgagaaattacttggtcttgaaaaagtcaatggagaaatacatacagttggggatgggaccctcccacatttaagagagttgtacctttacgggatgcggaagctaatgaatcttggggaggatagcttcggaccagcaagatcatattttccaaatctggaaattcttgagttgaaagactgcgacagcttaaagaatttaagatcatccgcaatatccttcgagaatctaacaactttgcaagtaagtcattgtaagggattgaaatacttgatatcttccaccatggccaaaagtctgatgcaactcgcaaaactagaagtccaggattgtgaggaaatgatagaaatagtggggagcaatgaaaatgatgatttagaagatgagattgaattcaaggtgttgaaacatttgaaactttctgctctaccaagtttaagaggcttttgctcgggaactcgtattgttaaatttccatctttggaaaaattatccgtgagttgtactcaactggagacgttcatctttgattctatgggtaaaagtaatacaattggccaggacatcaaagacaccgactcaagcgaaaaccgtgagattgaagtagtgcaaccttttctttttgacaacaaggttgaatttcctaggttggagagtttgtctctcaagggtttgacaaagttgaccacaatatggcatagtcaactttctctaacctctttctgtagactcaaagaccttgaagtacatggatgtggaaatataataaatatctttgtgcccagtactataggaagattgagtgttcttgagaccttattgataaaggagtgcaagtctgtacaagatgtatttgaacttggaggaattgatgttagaggaatacatgacacgtcagctacgactcagctgagatcttgtgactgtcaaaatctaaaatcagtcgaaattgattcttgtgagaatttgaaaaacattttccctgtttcagtggctagaaatcttcaacagttaacaaggctggtagtgaccaactgtggagtggaggaaatcattgcaagagaggagggactacaaacaacacctaagtttgtatttccaaaagtaacagaagtgatttttaggaatatgtcccaactcacgaatttctacccagggatgcatgtgtccgtctggccatcacttaatgagttgagggtggtacagtgtgctaaagtcaaagtgtttgccgaggaaatctcaaattttcaaggacataatgagtcggaacgtctcagtgttcttatcccgcagtctttctttttaattgagaaggattcatttcccaatttggaatggttgaccgtgaatgcagtagagttttcgaatggtccactcccagcagcagcgcagttgtttagcaaactagagcaactggatgtttgttgtccagaatcagttgttttccttgacaaattactcgacccagaaggaaacagtgcagttagaattgagacccagcagctcccacatttaaaagagttgaggcttgttggaatggagaagctgatgcatctaggccaggatgatgaggacgataactcacaatcagccccccgcatcccaaattttccaaacctgcaaattctattcgtgaatgcttgtcacagcttaaggaatcttagatcatccgcaatagccttcaacaatctaacaactttgcaagtacttgcttgcaagggattgaaatacttgataacttactccatggccaacagtttaatgcaactcacaaaactggaagtcgaggagtgcccaagactggtggaaatagtgggaagcaatgaagacggcgaatcaagacatgagattacatttaggcggttgaaacatttgaaactatttcgtctaccaagactacaacgcttttgctccggaaattgcatcgctaaattcccgtccttggagacttcaagcatgagcaaccgcctcaaattgaagattttcccagctcctgaccaaacgctacagctaacaaatgaagaggaagacacagatgtcgatgcttgggacaagtggctgactgctaatgataaacggaatttggcaagtactgattga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

972

Amino Acids

109.64

Weight (kDa)

5.35

Isoelectric Point (pI)

48.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2855
Acc36I ACCTGC 1 cut(s) 2445
AccB7I CCANNNNNTGG 2 cut(s) 200, 1512
AccI GTMKAC 2 cut(s) 1546, 2707
AccIII TCCGGA 1 cut(s) 2732
AciI CCGC 8 cut(s) 620, 916, 1029, 2108, 2416, 2490, 2680, 2785
AcoI YGGCCR 5 cut(s) 566, 1107, 1375, 1994, 2568
AfiI CCNNNNNNNGG 7 cut(s) 200, 530, 531, 703, 1512, 2620, 2761
AflII CTTAAG 1 cut(s) 2470
AflIII ACRYGT 1 cut(s) 1710
AjiI CACGTC 1 cut(s) 1713
AjnI CCWGG 5 cut(s) 544, 1143, 1377, 1972, 2379
Alw26I GTCTC 7 cut(s) 326, 1328, 1485, 1625, 2096, 2306, 2759
AlwNI CAGNNNCTG 1 cut(s) 2813
Ama87I CYCGRG 2 cut(s) 680, 1270
Aor13HI TCCGGA 1 cut(s) 2732
AoxI GGCC 7 cut(s) 268, 566, 1107, 1375, 1994, 2377, 2568
ApeKI GCWGC 3 cut(s) 2201, 2204, 2320
Asp700I GAANNNNTTC 1 cut(s) 2801
AspA2I CCTAGG 1 cut(s) 1463
AspLEI GCGC 1 cut(s) 2209
AspS9I GGNCC 3 cut(s) 876, 950, 2189
AsuII TTCGAA 1 cut(s) 2183
AvaI CYCGRG 2 cut(s) 680, 1270
AvaII GGWCC 3 cut(s) 876, 950, 2189
AvrII CCTAGG 1 cut(s) 1463
BaeGI GKGCMC 2 cut(s) 1602, 2615
BalI TGGCCA 4 cut(s) 1109, 1377, 1996, 2570
BbsI GAAGAC 4 cut(s) 23, 386, 2652, 2853
BbvI GCAGC 3 cut(s) 2213, 2216, 2332
BccI CCATC 5 cut(s) 202, 260, 866, 1303, 2005
BceAI ACGGC 2 cut(s) 553, 2665
BciT130I CCWGG 5 cut(s) 546, 1145, 1379, 1974, 2381
BciVI GTATCC 1 cut(s) 198
BcoDI GTCTC 7 cut(s) 326, 1328, 1485, 1625, 2096, 2306, 2759
BfmI CTRYAG 3 cut(s) 1543, 1608, 2825
BfrI CTTAAG 1 cut(s) 2470
BfuAI ACCTGC 1 cut(s) 2445
BfuI GTATCC 1 cut(s) 198
BglII AGATCT 1 cut(s) 1733
BisI GCNGC 3 cut(s) 2202, 2205, 2321
BlnI CCTAGG 1 cut(s) 1463
BlsI GCNGC 3 cut(s) 2203, 2206, 2322
BmcAI AGTACT 3 cut(s) 1606, 2526, 2911
Bme1390I CCNGG 5 cut(s) 546, 1145, 1379, 1974, 2381
Bme18I GGWCC 3 cut(s) 876, 950, 2189
BmeT110I CYCGRG 2 cut(s) 680, 1270
BmgBI CACGTC 1 cut(s) 1713
BmgT120I GGNCC 3 cut(s) 876, 950, 2189
BmiI GGNNCC 2 cut(s) 877, 878
BmrFI CCNGG 5 cut(s) 546, 1145, 1379, 1974, 2381
BmrI ACTGGG 1 cut(s) 1596
BmsI GCATC 8 cut(s) 903, 1110, 1968, 2358, 2380, 2427, 2751, 2851
BmuI ACTGGG 1 cut(s) 1596
BpiI GAAGAC 4 cut(s) 23, 386, 2652, 2853
BplI GAGNNNNNCTC 6 cut(s) 1309, 1341, 1465, 1497, 2042, 2074
BpmI CTGGAG 2 cut(s) 149, 1352
Bpu14I TTCGAA 1 cut(s) 2183
BpuEI CTTGAG 6 cut(s) 151, 839, 1007, 1384, 1469, 1649
BsaI GGTCTC 2 cut(s) 1625, 2306
BsaJI CCNNGG 7 cut(s) 1104, 1463, 1972, 1973, 2049, 2565, 2760
BsaWI WCCGGW 1 cut(s) 2732
BsaXI ACNNNNNCTCC 4 cut(s) 1463, 1493, 1640, 1670
Bsc4I CCNNNNNNNGG 7 cut(s) 200, 530, 531, 703, 1512, 2620, 2761
Bse1I ACTGG 6 cut(s) 569, 1335, 1602, 2238, 2601, 2625
Bse3DI GCAATG 3 cut(s) 1186, 1872, 2647
BseAI TCCGGA 1 cut(s) 2732
BseBI CCWGG 5 cut(s) 546, 1145, 1379, 1974, 2381
BseDI CCNNGG 7 cut(s) 1104, 1463, 1972, 1973, 2049, 2565, 2760
BseLI CCNNNNNNNGG 7 cut(s) 200, 530, 531, 703, 1512, 2620, 2761
BseMI GCAATG 3 cut(s) 1186, 1872, 2647
BseMII CTCAG 3 cut(s) 1721, 1739, 2107
BseNI ACTGG 6 cut(s) 569, 1335, 1602, 2238, 2601, 2625
BseRI GAGGAG 3 cut(s) 793, 1898, 2621
BseSI GKGCMC 2 cut(s) 1602, 2615
BseXI GCAGC 3 cut(s) 2213, 2216, 2332
BseYI CCCAGC 3 cut(s) 2197, 2316, 2806
BsgI GTGCAG 2 cut(s) 629, 2319
BshFI GGCC 7 cut(s) 270, 568, 1109, 1377, 1996, 2379, 2570
BsiHKCI CYCGRG 2 cut(s) 680, 1270
BsiSI CCGG 1 cut(s) 2733
BsiWI CGTACG 1 cut(s) 724
BslFI GGGAC 4 cut(s) 889, 1902, 1936, 2882
BslI CCNNNNNNNGG 7 cut(s) 200, 530, 531, 703, 1512, 2620, 2761
BsmAI GTCTC 7 cut(s) 326, 1328, 1485, 1625, 2096, 2306, 2759
BsmBI CGTCTC 2 cut(s) 1328, 2096
BsmFI GGGAC 4 cut(s) 889, 1902, 1936, 2882
BsmI GAATGC 2 cut(s) 2173, 2461
BsnI GGCC 7 cut(s) 270, 568, 1109, 1377, 1996, 2379, 2570
Bso31I GGTCTC 2 cut(s) 1625, 2306
BsoBI CYCGRG 2 cut(s) 680, 1270
Bsp119I TTCGAA 1 cut(s) 2183
Bsp1286I GDGCHC 2 cut(s) 1602, 2615
Bsp13I TCCGGA 1 cut(s) 2732
Bsp1407I TGTACA 2 cut(s) 463, 1660
Bsp143I GATC 4 cut(s) 959, 1022, 1733, 2483
Bsp19I CCATGG 2 cut(s) 1104, 2565
BspACI CCGC 8 cut(s) 620, 916, 1029, 2108, 2416, 2490, 2680, 2785
BspANI GGCC 7 cut(s) 270, 568, 1109, 1377, 1996, 2379, 2570
BspCNI CTCAG 3 cut(s) 1722, 1738, 2106
BspEI TCCGGA 1 cut(s) 2732
BspLI GGNNCC 2 cut(s) 877, 878
BspMI ACCTGC 1 cut(s) 2445
BspQI GCTCTTC 1 cut(s) 401
BspT104I TTCGAA 1 cut(s) 2183
BspTI CTTAAG 1 cut(s) 2470
BspTNI GGTCTC 2 cut(s) 1625, 2306
BsrDI GCAATG 3 cut(s) 1186, 1872, 2647
BsrGI TGTACA 2 cut(s) 463, 1660
BsrI ACTGG 6 cut(s) 569, 1335, 1602, 2238, 2601, 2625
BssECI CCNNGG 7 cut(s) 1104, 1463, 1972, 1973, 2049, 2565, 2760
BssMI GATC 4 cut(s) 959, 1022, 1733, 2483
BssT1I CCWWGG 4 cut(s) 1104, 1463, 2565, 2760
Bst2UI CCWGG 5 cut(s) 546, 1145, 1379, 1974, 2381
Bst6I CTCTTC 3 cut(s) 54, 401, 2835
BstAFI CTTAAG 1 cut(s) 2470
BstAUI TGTACA 2 cut(s) 463, 1660
BstBI TTCGAA 1 cut(s) 2183
BstC8I GCNNGC 3 cut(s) 116, 559, 2533
BstDEI CTNAG 5 cut(s) 1725, 1730, 1905, 2093, 2480
BstDSI CCRYGG 2 cut(s) 1104, 2565
BstHHI GCGC 1 cut(s) 2209
BstKTI GATC 4 cut(s) 962, 1025, 1736, 2486
BstMAI GTCTC 7 cut(s) 326, 1328, 1485, 1625, 2096, 2306, 2759
BstMBI GATC 4 cut(s) 959, 1022, 1733, 2483
BstMWI GCNNNNNNNGC 3 cut(s) 281, 386, 766
BstNI CCWGG 5 cut(s) 546, 1145, 1379, 1974, 2381
BstNSI RCATGY 1 cut(s) 1985
BstSCI CCNGG 5 cut(s) 544, 1143, 1377, 1972, 2379
BstSFI CTRYAG 3 cut(s) 1543, 1608, 2825
BstSLI GKGCMC 2 cut(s) 1602, 2615
BstV1I GCAGC 3 cut(s) 2213, 2216, 2332
BstV2I GAAGAC 4 cut(s) 23, 386, 2652, 2853
BstX2I RGATCY 1 cut(s) 1733
BstYI RGATCY 1 cut(s) 1733
BsuI GTATCC 1 cut(s) 198
BsuRI GGCC 7 cut(s) 270, 568, 1109, 1377, 1996, 2379, 2570
BtgI CCRYGG 2 cut(s) 1104, 2565
BtgZI GCGATG 1 cut(s) 2728
BtrI CACGTC 1 cut(s) 1713
BtsIMutI CAGTG 6 cut(s) 177, 390, 1815, 2030, 2101, 2302
BveI ACCTGC 1 cut(s) 2445
Cac8I GCNNGC 3 cut(s) 116, 559, 2533
CaiI CAGNNNCTG 1 cut(s) 2813
CfoI GCGC 1 cut(s) 2209
Cfr13I GGNCC 3 cut(s) 876, 950, 2189
CseI GACGC 2 cut(s) 369, 632
CspCI CAANNNNNGTGG 4 cut(s) 738, 773, 2604, 2639
CviAII CATG 7 cut(s) 1105, 1568, 1706, 1982, 2566, 2663, 2776
DdeI CTNAG 5 cut(s) 1725, 1730, 1905, 2093, 2480
DpnI GATC 4 cut(s) 961, 1024, 1735, 2485
DpnII GATC 4 cut(s) 959, 1022, 1733, 2483
DraI TTTAAA 1 cut(s) 2334
DrdI GACNNNNNNGTC 1 cut(s) 2855
DseDI GACNNNNNNGTC 1 cut(s) 2855
EaeI YGGCCR 5 cut(s) 566, 1107, 1375, 1994, 2568
Eam1104I CTCTTC 3 cut(s) 54, 401, 2835
EarI CTCTTC 3 cut(s) 54, 401, 2835
Eco130I CCWWGG 4 cut(s) 1104, 1463, 2565, 2760
Eco31I GGTCTC 2 cut(s) 1625, 2306
Eco32I GATATC 1 cut(s) 1095
Eco47I GGWCC 3 cut(s) 876, 950, 2189
Eco88I CYCGRG 2 cut(s) 680, 1270
EcoO109I RGGNCCY 1 cut(s) 876
EcoRI GAATTC 2 cut(s) 811, 1211
EcoRII CCWGG 5 cut(s) 544, 1143, 1377, 1972, 2379
EcoRV GATATC 1 cut(s) 1095
EcoT14I CCWWGG 4 cut(s) 1104, 1463, 2565, 2760
EcoT22I ATGCAT 2 cut(s) 1983, 2373
ErhI CCWWGG 4 cut(s) 1104, 1463, 2565, 2760
Esp3I CGTCTC 2 cut(s) 1328, 2096
FaeI CATG 7 cut(s) 1108, 1571, 1709, 1985, 2569, 2666, 2779
FaqI GGGAC 4 cut(s) 889, 1902, 1936, 2882
FatI CATG 7 cut(s) 1104, 1567, 1705, 1981, 2565, 2662, 2775
FauI CCCGC 2 cut(s) 2115, 2423
FauNDI CATATG 1 cut(s) 502
FblI GTMKAC 2 cut(s) 1546, 2707
Fnu4HI GCNGC 3 cut(s) 2202, 2205, 2321
Fsp4HI GCNGC 3 cut(s) 2202, 2205, 2321
GlaI GCGC 1 cut(s) 2208
GluI GCNGC 3 cut(s) 2202, 2205, 2321
GsaI CCCAGC 3 cut(s) 2201, 2320, 2810
GsuI CTGGAG 2 cut(s) 149, 1352
HaeIII GGCC 7 cut(s) 270, 568, 1109, 1377, 1996, 2379, 2570
HapII CCGG 1 cut(s) 2733
HgaI GACGC 2 cut(s) 369, 632
HhaI GCGC 1 cut(s) 2209
Hin1II CATG 7 cut(s) 1108, 1571, 1709, 1985, 2569, 2666, 2779
Hin6I GCGC 1 cut(s) 2207
HinP1I GCGC 1 cut(s) 2207
HincII GTYRAC 4 cut(s) 1503, 1523, 1833, 2160
HindII GTYRAC 4 cut(s) 1503, 1523, 1833, 2160
HpaI GTTAAC 1 cut(s) 1833
HpaII CCGG 1 cut(s) 2733
Hpy166II GTNNAC 8 cut(s) 662, 1503, 1523, 1547, 1833, 2160, 2192, 2708
Hpy188I TCNGA 5 cut(s) 51, 85, 950, 1119, 2086
Hpy8I GTNNAC 8 cut(s) 662, 1503, 1523, 1547, 1833, 2160, 2192, 2708
HpyAV CCTTC 7 cut(s) 152, 224, 679, 1048, 2125, 2282, 2509
HpyCH4IV ACGT 6 cut(s) 28, 551, 723, 1337, 1712, 2089
HpyF10VI GCNNNNNNNGC 3 cut(s) 281, 386, 766
HpyF3I CTNAG 5 cut(s) 1725, 1730, 1905, 2093, 2480
HpySE526I ACGT 6 cut(s) 28, 551, 723, 1337, 1712, 2089
Hsp92II CATG 7 cut(s) 1108, 1571, 1709, 1985, 2569, 2666, 2779
HspAI GCGC 1 cut(s) 2207
KflI GGGWCCC 1 cut(s) 876
Kpn2I TCCGGA 1 cut(s) 2732
KspAI GTTAAC 1 cut(s) 1833
Kzo9I GATC 4 cut(s) 959, 1022, 1733, 2483
LguI GCTCTTC 1 cut(s) 401
LmnI GCTCC 5 cut(s) 130, 1176, 2328, 2735, 2815
Lsp1109I GCAGC 3 cut(s) 2213, 2216, 2332
LweI GCATC 8 cut(s) 903, 1110, 1968, 2358, 2380, 2427, 2751, 2851
MaeII ACGT 6 cut(s) 28, 551, 723, 1337, 1712, 2089
MaeIII GTNAC 6 cut(s) 353, 418, 1739, 1846, 1924, 2462
MalI GATC 4 cut(s) 961, 1024, 1735, 2485
MboI GATC 4 cut(s) 959, 1022, 1733, 2483
MfeI CAATTG 1 cut(s) 1371
MflI RGATCY 1 cut(s) 1733
MhlI GDGCHC 2 cut(s) 1602, 2615
MlsI TGGCCA 4 cut(s) 1109, 1377, 1996, 2570
MluNI TGGCCA 4 cut(s) 1109, 1377, 1996, 2570
MlyI GAGTC 4 cut(s) 1391, 1542, 1717, 2090
MmeI TCCRAC 4 cut(s) 699, 1449, 2064, 2332
Mox20I TGGCCA 4 cut(s) 1109, 1377, 1996, 2570
Mph1103I ATGCAT 2 cut(s) 1983, 2373
MroI TCCGGA 1 cut(s) 2732
MroXI GAANNNNTTC 1 cut(s) 2801
MscI TGGCCA 4 cut(s) 1109, 1377, 1996, 2570
MslI CAYNNNNRTG 1 cut(s) 1572
Msp20I TGGCCA 4 cut(s) 1109, 1377, 1996, 2570
MspA1I CMGCKG 1 cut(s) 1729
MspCI CTTAAG 1 cut(s) 2470
MspI CCGG 1 cut(s) 2733
MspR9I CCNGG 5 cut(s) 546, 1145, 1379, 1974, 2381
MunI CAATTG 1 cut(s) 1371
Mva1269I GAATGC 2 cut(s) 2173, 2461
MvaI CCWGG 5 cut(s) 546, 1145, 1379, 1974, 2381
MwoI GCNNNNNNNGC 3 cut(s) 281, 386, 766
NcoI CCATGG 2 cut(s) 1104, 2565
NdeI CATATG 1 cut(s) 502
NdeII GATC 4 cut(s) 959, 1022, 1733, 2483
NlaIII CATG 7 cut(s) 1108, 1571, 1709, 1985, 2569, 2666, 2779
NlaIV GGNNCC 2 cut(s) 877, 878
NmeAIII GCCGAG 1 cut(s) 2074
NmuCI GTSAC 4 cut(s) 353, 1739, 1846, 2462
NsiI ATGCAT 2 cut(s) 1983, 2373
NspI RCATGY 1 cut(s) 1985
NspV TTCGAA 1 cut(s) 2183
PaeR7I CTCGAG 1 cut(s) 680
PasI CCCWGGG 1 cut(s) 1973
PciSI GCTCTTC 1 cut(s) 401
PcsI WCGNNNNNNNCGW 1 cut(s) 1718
PctI GAATGC 2 cut(s) 2173, 2461
PdmI GAANNNNTTC 1 cut(s) 2801
Pfl23II CGTACG 1 cut(s) 724
PflMI CCANNNNNTGG 2 cut(s) 200, 1512
PfoI TCCNGGA 2 cut(s) 544, 1143
PkrI GCNGC 3 cut(s) 2203, 2206, 2322
PleI GAGTC 4 cut(s) 1391, 1542, 1717, 2089
PpsI GAGTC 4 cut(s) 1391, 1542, 1717, 2089
PpuMI RGGWCCY 1 cut(s) 876
Psp5II RGGWCCY 1 cut(s) 876
Psp6I CCWGG 5 cut(s) 544, 1143, 1377, 1972, 2379
PspFI CCCAGC 3 cut(s) 2197, 2316, 2806
PspGI CCWGG 5 cut(s) 544, 1143, 1377, 1972, 2379
PspLI CGTACG 1 cut(s) 724
PspN4I GGNNCC 2 cut(s) 877, 878
PspPI GGNCC 3 cut(s) 876, 950, 2189
PspPPI RGGWCCY 1 cut(s) 876
PstNI CAGNNNCTG 1 cut(s) 2813
PsuI RGATCY 1 cut(s) 1733
PvuII CAGCTG 1 cut(s) 1729
RseI CAYNNNNRTG 1 cut(s) 1572
SapI GCTCTTC 1 cut(s) 401
SatI GCNGC 3 cut(s) 2202, 2205, 2321
Sau3AI GATC 4 cut(s) 959, 1022, 1733, 2483
Sau96I GGNCC 3 cut(s) 876, 950, 2189
ScaI AGTACT 3 cut(s) 1606, 2526, 2911
SchI GAGTC 4 cut(s) 1391, 1542, 1717, 2090
ScrFI CCNGG 5 cut(s) 546, 1145, 1379, 1974, 2381
SduI GDGCHC 2 cut(s) 1602, 2615
SfaNI GCATC 8 cut(s) 903, 1110, 1968, 2358, 2380, 2427, 2751, 2851
SfcI CTRYAG 3 cut(s) 1543, 1608, 2825
Sfr274I CTCGAG 1 cut(s) 680
SfuI TTCGAA 1 cut(s) 2183
SinI GGWCC 3 cut(s) 876, 950, 2189
SlaI CTCGAG 1 cut(s) 680
SmiMI CAYNNNNRTG 1 cut(s) 1572
SmlI CTYRAG 8 cut(s) 166, 680, 818, 986, 1399, 1484, 1628, 2470
SmoI CTYRAG 8 cut(s) 166, 680, 818, 986, 1399, 1484, 1628, 2470
SsiI CCGC 8 cut(s) 620, 916, 1029, 2108, 2416, 2490, 2680, 2785
StyD4I CCNGG 5 cut(s) 544, 1143, 1377, 1972, 2379
StyI CCWWGG 4 cut(s) 1104, 1463, 2565, 2760
TaiI ACGT 6 cut(s) 31, 554, 726, 1340, 1715, 2092
TaqI TCGA 7 cut(s) 681, 1041, 1764, 2183, 2280, 2604, 2859
TatI WGTACW 9 cut(s) 317, 463, 599, 1322, 1564, 1604, 1660, 2524, 2909
TscAI CASTG 6 cut(s) 184, 390, 1815, 2030, 2101, 2302
TseFI GTSAC 4 cut(s) 353, 1739, 1846, 2462
TseI GCWGC 3 cut(s) 2201, 2204, 2320
Tsp45I GTSAC 4 cut(s) 353, 1739, 1846, 2462
TspDTI ATGAA 9 cut(s) 102, 681, 779, 941, 1197, 1330, 2127, 2658, 2853
TspGWI ACGGA 3 cut(s) 1303, 1978, 2911
TspRI CASTG 6 cut(s) 184, 390, 1815, 2030, 2101, 2302
Van91I CCANNNNNTGG 2 cut(s) 200, 1512
Vha464I CTTAAG 1 cut(s) 2470
VpaK11BI GGWCC 3 cut(s) 876, 950, 2189
XbaI TCTAGA 2 cut(s) 310, 328
XceI RCATGY 1 cut(s) 1985
XcmI CCANNNNNNNNNTGG 1 cut(s) 1858
XhoI CTCGAG 1 cut(s) 680
XmaJI CCTAGG 1 cut(s) 1463
XmiI GTMKAC 2 cut(s) 1546, 2707
XmnI GAANNNNTTC 1 cut(s) 2801
ZrmI AGTACT 3 cut(s) 1606, 2526, 2911
Zsp2I ATGCAT 2 cut(s) 1983, 2373
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.