Rmu_sc0008647.1_g000014

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008647.1
OG0000042
Physical Location & Seq
Reverse (-)
50355 .. 55275
4921 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008647.1_g000014.1.cds

Sequence Viewer

Length: 4428 bp
atggattttctctctgcaattggtagtgccatttttgaaccaattgtcgggcacatggttcaacctgttgcacgccaagtgggttatgttattcacttcaagagcaaccttcaaaaactggaggctcgagtggaagaagtgagagctgctagagaggggacaaacattgaggttgctgaaactcaaagaaaaggtgaaggaatccacccagatgtccaattgtggctgacaaaagtggaggagatcactgcaaagactgaccaattcctgaaagatgaatgcagccaagaaaatctgaaatgcctacatgggttttgccctaatctgaccatgcgtcatcggctgagcaggaattctacaaagctgttgcaggaggttgttgaactacacgaaaaaagaaggcagcttcccaaagtttcatgcggtgtcctccgcgaagaggcgtgcatcatatctactggagattacctggcctttcaatcaaggatgtcaactgtgaaggaaatcatggatgaactgaagaatcctaaaaccatcaggatcggggtgtacggaattggaggcgtcggtaaaaccacacttgtcaaagaagcgtataggcaagctaaacaagatcagaccaagttatttgatgatgtggttttagtcctcgatgtgaaaaagaatccaggcccggaagatcttcagaagaaaattgttgaaaaattggacatgaagattagtcaaagtgatgatgagactatagacggaagggcgaagcgtctatgtggcaggataaaggacaaaaatgttcttgtaattctggacgatgtttgggaaccaattgacttggagtctatcggacttcctagcgtggctacttgtaagataatgctgacttctagaagtagaaaagcattgtctgatatgggtacgcataaagattttcagcttcacattttaggagaagaagagacttgggttttatttgagaacaaggcaggtgatgttgttaaggatccttctacacaaacagtagcaaaacaagtagcccaaaaatgtggaggtctgcctgttttggttgtcacagtggcaagcgctttaaagaatagaaccactctacctccatggaaagacgctttgacatgcctgcaagaagggtctgacagagatgtcgaattgacagaaaaggcatacttgggtctagagtggagttacaatcagttgactgataagcaactgaagccattgttcttgttatgtggatatgctgggcagtggaattatatttttttggacgacttgttgtaccatgccgtgggtttaggtttttttgaaaagccctacacagtggagacagcacgaaatgcattgtattcgtgggttgaaaaactcaaagacttttgcctgttggtagatagcgatgatgatggatatgtcacaatgcatgaccttgtacgcaatgctgctaaccggattgcgtccagagatccccagatattagcattagtgaaagatgaagatgagggtgggttgaaagaatggccagataaaagtttcttagagaagtgcacaatcatctctttgcattgtgaccgctatttcccaatgcttcctcaagttatgcaatgcccagctctaagaatgtttcggttgatgggtaattctaaaccgctggcaccactggcaccgctggcaatatcccccggattatttgaagggatgaaacaactcaatgttttgagttggatatacatgaatataggggctctacctcaatctcttcgattcctagagaatcttcagacactgtgtttaatacgatgcacattggaagatatatctctcgttgggcagttaagaaacttagaaattctaagttttgaaggttctgacgttcaacatctgccccaagaaatagggcaactggctcatctgcggttgttggatctatccaactgctatagacttgaagtgatctcgcctggtgttatatcaagcttgacaagactggaatacttgacaatgagacaaagctttaacaattgggtgactgaaggtgaaagaagcaacgctagcctatcagagctggagcatttgtctcatttaactacattagaaatacatgttcccgatgcggaccttcttccagcaaaccttttctcccttaagctagaaagatttcaaatcatgattggtgaaacatgggcgtgggacgagcatgagcatgcacgtgaggatgaggatgaggatgaggatgaggctgacgatgaggatgaggctgacgatgacgatgaggaagaggaggaggaagaggaggaagaagaggaagaggatcaggaggattataagcactccctcaacagactgaaactccagctcactacaaacattgagttgaaccaaggtctaagaaagttgctgaagatatgccatgatttgtccctgtatgggacagagagtgttaatcatattgtccaccaatttgataatgaagaatttcagcaactgaagcatctctgtgtccaaaacaatgtcgactttattattaccaagaaggttatgttgccgaacttaaagactttggtgatacatgagtgtgatgatataagattcctgttcaccttttctgtggctagaagtcttgtacaactcaaatgtttgaagatttcgtcatgtaaactgttggaagagattgtatcatcgacaagagaatgcgatgaagaaagtatgggtaaaatgtttcccaatctggaagttttgaatctaaagggactcgaaaagctggctagattttgcatgggaagttatgttgaatttccgtccttgaaagaattggatgtagatgattgtcctgaactgggggctttcatttgtgataatgttgatacgagtacgagcagtcgagggattataatcgacagagaaactcatgagagagactcgaaacaagaaaagaaccttgatgttaacagtgagacttttgtacagtccttcctttttgacgaaaaggtaggatttccttgcttggagaatttgaaaatcaatggggtcctgaagttgaagacaatatggcacagccaacaagctcaagactctttttggacactcaacaacgttaaagtttccaaatgcgacgcattaatcaatgtcattacgcctgctgtcatgggaagattgaatgctctgaaaagcatagatataaagaattgcaggtcgctggaagtggtttttgaacttggaggaagtaatgcacacttccaaaatcttgtttttgtatccgtatggcgttgtaacagattgaagaatatttttccagcctcagtggccagaagtctccaacaactaagttggctgagtctgggtttttgtcatggagtggaggaaatcgtcggtgaggaagagggagtactagaaacaccgtcgtctccgcagtttgtgttcccaaaagtaacattcatagagtttgaaaccttgtccagtctcaggagcttttatccaagaatgcatacttcagagtggccattactccaaactttgacagtctgtgactgtaagggagtaaagactttggcggcccaactttcattcttgcgggaaaaatacgaggaggaccctcttatgtctccacaatctctctttctagctgacaaggattcattcatcaacctagaagacttggaattagatgccatggaaatttggaatggtccaaccccagcagagttggtctttggcaaattaaattcatttgctttcgtaaattgtgtgcctttctccaagcaagtatcagttctcttccttcagaaactacaaaatcttgaaaaacttcaagtagggtgggattcttccgaagaaatatttgtggatgaaggaattacaaatagtggggagataagtgcagctgggagtagaactctaccacgtgtaagagttttgaaggtcacggaaatgaaaaatttgatgcatctagggaaggagaactcccaatcagacccactttttccgaacttggaaattcttgaagtgtcgatgtgcagaagtctgaagagtctacagtcatcagctgtatcgctccggaatctaacaagtttgacagtaatgaactgtgggagattgaattatttagtatcattttcggtggctcaaagcttaacgcaactcacaaaactgaaagtgaagaaatgtaaaagaatggtagtaatagtggccagcaatgtcggagatgatgatgaagcagaaaatgagattgctttcagccggttgcaagaattggaaatttctgatctaccaagtctgcaaggtttctgctcctccagaaattatgcagtcaacttctcatccttagtgactttgaggattaaccaagtgccgggattgaagcagttctccgaagcatggcagtttctgagctgcatctgcacatgcatgcacgcaacactggcctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

1475

Amino Acids

167.16

Weight (kDa)

5.03

Isoelectric Point (pI)

47.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2328, 2894
AarI CACCTGC 1 cut(s) 971
AasI GACNNNNNNGTC 1 cut(s) 1151
Acc36I ACCTGC 2 cut(s) 971, 3183
AccB1I GGYRCC 2 cut(s) 1657, 1666
AccB7I CCANNNNNTGG 1 cut(s) 1297
AccI GTMKAC 2 cut(s) 2517, 4033
AccII CGCG 1 cut(s) 435
AccIII TCCGGA 1 cut(s) 4056
AclI AACGTT 1 cut(s) 3096
AclWI GGATC 6 cut(s) 548, 992, 1005, 1463, 1935, 2322
AcoI YGGCCR 4 cut(s) 1523, 3306, 3500, 4188
AcvI CACGTG 2 cut(s) 2213, 3905
AcyI GRCGYC 1 cut(s) 564
AfaI GTAC 8 cut(s) 551, 913, 1289, 1437, 2628, 2875, 2967, 3390
AfeI AGCGCT 1 cut(s) 1078
AfiI CCNNNNNNNGG 8 cut(s) 47, 439, 1297, 2430, 2840, 3465, 4351, 4377
AflII CTTAAG 1 cut(s) 2147
AflIII ACRYGT 2 cut(s) 2104, 3904
AhdI GACNNNNNGTC 2 cut(s) 333, 832
AjnI CCWGG 3 cut(s) 468, 667, 1963
Alw21I GWGCWC 1 cut(s) 1553
Alw44I GTGCAC 1 cut(s) 1549
AlwI GGATC 6 cut(s) 548, 992, 1005, 1463, 1935, 2322
AlwNI CAGNNNCTG 3 cut(s) 1789, 2488, 4387
Ama87I CYCGRG 1 cut(s) 126
Aor13HI TCCGGA 1 cut(s) 4056
Aor51HI AGCGCT 1 cut(s) 1078
AoxI GGCC 8 cut(s) 471, 670, 1523, 3306, 3500, 3555, 4188, 4422
ApaLI GTGCAC 1 cut(s) 1549
ApeKI GCWGC 6 cut(s) 146, 282, 403, 1445, 3881, 4392
AseI ATTAAT 1 cut(s) 3122
Asp700I GAANNNNTTC 5 cut(s) 681, 2160, 2478, 3807, 4364
AspLEI GCGC 1 cut(s) 1079
AspS9I GGNCC 6 cut(s) 671, 2119, 3031, 3556, 3592, 3689
AsuC2I CCSGG 3 cut(s) 674, 1686, 4353
AsuHPI GGTGA 8 cut(s) 206, 995, 2041, 2051, 2189, 2578, 2593, 3386
AsuNHI GCTAGC 1 cut(s) 2054
AvaI CYCGRG 1 cut(s) 126
AvaII GGWCC 4 cut(s) 2119, 3031, 3592, 3689
BaeGI GKGCMC 2 cut(s) 54, 1553
BaeI ACNNNNGTAYC 2 cut(s) 2561, 2594
BalI TGGCCA 4 cut(s) 1525, 3308, 3502, 4190
BamHI GGATCC 1 cut(s) 997
BanI GGYRCC 2 cut(s) 1657, 1666
BanII GRGCYC 1 cut(s) 1750
BarI GAAGNNNNNNTAC 2 cut(s) 3372, 3404
BbrPI CACGTG 2 cut(s) 2213, 3905
BbsI GAAGAC 2 cut(s) 3050, 3660
Bbv12I GWGCWC 1 cut(s) 1553
BbvI GCAGC 6 cut(s) 133, 294, 415, 1432, 3893, 4379
BccI CCATC 3 cut(s) 542, 1403, 1630
BceAI ACGGC 1 cut(s) 1280
BcgI CGANNNNNNTGC 2 cut(s) 1338, 1372
BciT130I CCWGG 3 cut(s) 470, 669, 1965
BciVI GTATCC 1 cut(s) 3268
BcnI CCSGG 3 cut(s) 674, 1686, 4353
BfmI CTRYAG 3 cut(s) 741, 1942, 4034
BfoI RGCGCY 1 cut(s) 1080
BfrI CTTAAG 1 cut(s) 2147
BfuAI ACCTGC 2 cut(s) 971, 3183
BfuI GTATCC 1 cut(s) 3268
BglI GCCNNNNNGGC 1 cut(s) 3305
BglII AGATCT 1 cut(s) 679
BisI GCNGC 7 cut(s) 147, 283, 404, 1446, 3555, 3882, 4393
BlpI GCTNAGC 1 cut(s) 344
BlsI GCNGC 7 cut(s) 148, 284, 405, 1447, 3556, 3883, 4394
BmcAI AGTACT 1 cut(s) 3390
Bme1390I CCNGG 6 cut(s) 470, 669, 674, 1686, 1965, 4353
Bme18I GGWCC 4 cut(s) 2119, 3031, 3592, 3689
BmeRI GACNNNNNGTC 2 cut(s) 333, 832
BmeT110I CYCGRG 1 cut(s) 126
BmgT120I GGNCC 6 cut(s) 671, 2119, 3031, 3556, 3592, 3689
BmiI GGNNCC 6 cut(s) 819, 999, 1659, 1668, 3032, 3594
BmrFI CCNGG 6 cut(s) 470, 669, 674, 1686, 1965, 4353
BmrI ACTGGG 1 cut(s) 2849
BmsI GCATC 8 cut(s) 456, 1793, 2104, 2503, 3658, 3933, 3955, 4404
BmtI GCTAGC 1 cut(s) 2058
BmuI ACTGGG 1 cut(s) 2849
BpiI GAAGAC 2 cut(s) 3050, 3660
BplI GAGNNNNNCTC 4 cut(s) 2906, 2938, 3880, 3912
BpmI CTGGAG 5 cut(s) 140, 480, 2090, 2339, 4279
Bpu1102I GCTNAGC 1 cut(s) 344
BpuEI CTTGAG 2 cut(s) 1581, 3054
BpuMI CCSGG 3 cut(s) 674, 1686, 4353
BsaAI YACGTR 2 cut(s) 2213, 3905
BsaBI GATNNNNATC 1 cut(s) 2894
BsaHI GRCGYC 1 cut(s) 564
BsaJI CCNNGG 5 cut(s) 1106, 1296, 1684, 2383, 3672
BsaWI WCCGGW 2 cut(s) 1452, 4056
BsaXI ACNNNNNCTCC 8 cut(s) 1087, 1117, 2063, 2093, 2126, 2156, 2337, 2367
Bsc4I CCNNNNNNNGG 8 cut(s) 47, 439, 1297, 2430, 2840, 3465, 4351, 4377
Bse118I RCCGGY 1 cut(s) 4239
Bse1I ACTGG 8 cut(s) 123, 463, 1668, 1911, 1995, 2844, 3459, 4425
Bse3DI GCAATG 3 cut(s) 1447, 1613, 4201
Bse8I GATNNNNATC 1 cut(s) 2894
BseAI TCCGGA 1 cut(s) 4056
BseBI CCWGG 3 cut(s) 470, 669, 1965
BseDI CCNNGG 5 cut(s) 1106, 1296, 1684, 2383, 3672
BseJI GATNNNNATC 1 cut(s) 2894
BseLI CCNNNNNNNGG 8 cut(s) 47, 439, 1297, 2430, 2840, 3465, 4351, 4377
BseMI GCAATG 3 cut(s) 1447, 1613, 4201
BseMII CTCAG 5 cut(s) 335, 3315, 3326, 3478, 4379
BseNI ACTGG 8 cut(s) 123, 463, 1668, 1911, 1995, 2844, 3459, 4425
BseRI GAGGAG 6 cut(s) 254, 2297, 2300, 2309, 3602, 4282
BseSI GKGCMC 2 cut(s) 54, 1553
BseXI GCAGC 6 cut(s) 133, 294, 415, 1432, 3893, 4379
BseYI CCCAGC 4 cut(s) 1250, 1612, 3697, 3884
BsgI GTGCAG 3 cut(s) 3900, 4036, 4384
Bsh1236I CGCG 1 cut(s) 435
BshFI GGCC 8 cut(s) 473, 672, 1525, 3308, 3502, 3557, 4190, 4424
BshNI GGYRCC 2 cut(s) 1657, 1666
BsiHKAI GWGCWC 1 cut(s) 1553
BsiHKCI CYCGRG 1 cut(s) 126
BsiSI CCGG 6 cut(s) 674, 1453, 1686, 4057, 4240, 4352
BslFI GGGAC 5 cut(s) 172, 2207, 2407, 2446, 2766
BslI CCNNNNNNNGG 8 cut(s) 47, 439, 1297, 2430, 2840, 3465, 4351, 4377
BsmBI CGTCTC 1 cut(s) 3411
BsmFI GGGAC 5 cut(s) 172, 2207, 2407, 2446, 2766
BsmI GAATGC 4 cut(s) 284, 2699, 3166, 3489
BsnI GGCC 8 cut(s) 473, 672, 1525, 3308, 3502, 3557, 4190, 4424
BsoBI CYCGRG 1 cut(s) 126
Bsp1286I GDGCHC 3 cut(s) 54, 1553, 1750
Bsp13I TCCGGA 1 cut(s) 4056
Bsp1407I TGTACA 2 cut(s) 2626, 2965
Bsp1720I GCTNAGC 1 cut(s) 344
Bsp19I CCATGG 2 cut(s) 1106, 3672
BspANI GGCC 8 cut(s) 473, 672, 1525, 3308, 3502, 3557, 4190, 4424
BspCNI CTCAG 5 cut(s) 336, 3314, 3327, 3477, 4380
BspEI TCCGGA 1 cut(s) 4056
BspFNI CGCG 1 cut(s) 435
BspHI TCATGA 2 cut(s) 2169, 2911
BspLI GGNNCC 6 cut(s) 819, 999, 1659, 1668, 3032, 3594
BspMI ACCTGC 2 cut(s) 971, 3183
BspOI GCTAGC 1 cut(s) 2058
BspPI GGATC 6 cut(s) 548, 992, 1005, 1463, 1935, 2322
BspT107I GGYRCC 2 cut(s) 1657, 1666
BspTI CTTAAG 1 cut(s) 2147
BsrDI GCAATG 3 cut(s) 1447, 1613, 4201
BsrFI RCCGGY 1 cut(s) 4239
BsrGI TGTACA 2 cut(s) 2626, 2965
BsrI ACTGG 8 cut(s) 123, 463, 1668, 1911, 1995, 2844, 3459, 4425
BssAI RCCGGY 1 cut(s) 4239
BssECI CCNNGG 5 cut(s) 1106, 1296, 1684, 2383, 3672
BssNI GRCGYC 1 cut(s) 564
BssT1I CCWWGG 3 cut(s) 1106, 2383, 3672
Bst2UI CCWGG 3 cut(s) 470, 669, 1965
BstACI GRCGYC 1 cut(s) 564
BstAFI CTTAAG 1 cut(s) 2147
BstAPI GCANNNNNTGC 1 cut(s) 1346
BstAUI TGTACA 2 cut(s) 2626, 2965
BstBAI YACGTR 2 cut(s) 2213, 3905
BstDSI CCRYGG 3 cut(s) 1106, 1296, 3672
BstFNI CGCG 1 cut(s) 435
BstH2I RGCGCY 1 cut(s) 1080
BstHHI GCGC 1 cut(s) 1079
BstNI CCWGG 3 cut(s) 470, 669, 1965
BstNSI RCATGY 5 cut(s) 1128, 2108, 2210, 4407, 4411
BstSCI CCNGG 6 cut(s) 468, 667, 672, 1684, 1963, 4351
BstSFI CTRYAG 3 cut(s) 741, 1942, 4034
BstSLI GKGCMC 2 cut(s) 54, 1553
BstUI CGCG 1 cut(s) 435
BstV1I GCAGC 6 cut(s) 133, 294, 415, 1432, 3893, 4379
BstV2I GAAGAC 2 cut(s) 3050, 3660
BstX2I RGATCY 4 cut(s) 679, 997, 1468, 1927
BstXI CCANNNNNNTGG 1 cut(s) 1040
BstYI RGATCY 4 cut(s) 679, 997, 1468, 1927
BsuI GTATCC 1 cut(s) 3268
BsuRI GGCC 8 cut(s) 473, 672, 1525, 3308, 3502, 3557, 4190, 4424
BtgI CCRYGG 3 cut(s) 1106, 1296, 3672
BtgZI GCGATG 2 cut(s) 1416, 2712
BtsI GCAGTG 2 cut(s) 246, 1262
BtsIMutI CAGTG 9 cut(s) 246, 1074, 1262, 1335, 1661, 1787, 2959, 3309, 4418
BveI ACCTGC 2 cut(s) 971, 3183
CaiI CAGNNNCTG 3 cut(s) 1789, 2488, 4387
CciI TCATGA 2 cut(s) 2169, 2911
CfoI GCGC 1 cut(s) 1079
Cfr10I RCCGGY 1 cut(s) 4239
Cfr13I GGNCC 6 cut(s) 671, 2119, 3031, 3556, 3592, 3689
CseI GACGC 6 cut(s) 323, 553, 749, 1124, 1449, 3125
Csp6I GTAC 8 cut(s) 550, 912, 1288, 1436, 2627, 2874, 2966, 3389
CspCI CAANNNNNGTGG 2 cut(s) 3800, 3835
CviQI GTAC 8 cut(s) 550, 912, 1288, 1436, 2627, 2874, 2966, 3389
DraI TTTAAA 1 cut(s) 1083
DrdI GACNNNNNNGTC 1 cut(s) 1151
DriI GACNNNNNGTC 2 cut(s) 333, 832
DseDI GACNNNNNNGTC 1 cut(s) 1151
EaeI YGGCCR 4 cut(s) 1523, 3306, 3500, 4188
Eam1105I GACNNNNNGTC 2 cut(s) 333, 832
Eco130I CCWWGG 3 cut(s) 1106, 2383, 3672
Eco24I GRGCYC 1 cut(s) 1750
Eco47I GGWCC 4 cut(s) 2119, 3031, 3592, 3689
Eco47III AGCGCT 1 cut(s) 1078
Eco72I CACGTG 2 cut(s) 2213, 3905
Eco88I CYCGRG 1 cut(s) 126
EcoO109I RGGNCCY 2 cut(s) 3031, 3592
EcoRI GAATTC 1 cut(s) 352
EcoRII CCWGG 3 cut(s) 468, 667, 1963
EcoT14I CCWWGG 3 cut(s) 1106, 2383, 3672
EcoT22I ATGCAT 5 cut(s) 1351, 1428, 3489, 3948, 4409
EcoT38I GRGCYC 1 cut(s) 1750
ErhI CCWWGG 3 cut(s) 1106, 2383, 3672
Esp3I CGTCTC 1 cut(s) 3411
FalI AAGNNNNNCTT 2 cut(s) 1160, 1192
FaqI GGGAC 5 cut(s) 172, 2207, 2407, 2446, 2766
FauI CCCGC 1 cut(s) 3567
FblI GTMKAC 2 cut(s) 2517, 4033
Fnu4HI GCNGC 7 cut(s) 147, 283, 404, 1446, 3555, 3882, 4393
FriOI GRGCYC 1 cut(s) 1750
Fsp4HI GCNGC 7 cut(s) 147, 283, 404, 1446, 3555, 3882, 4393
GlaI GCGC 1 cut(s) 1078
GluI GCNGC 7 cut(s) 147, 283, 404, 1446, 3555, 3882, 4393
GsaI CCCAGC 4 cut(s) 1254, 1616, 3701, 3888
GsuI CTGGAG 5 cut(s) 140, 480, 2090, 2339, 4279
HaeII RGCGCY 1 cut(s) 1080
HaeIII GGCC 8 cut(s) 473, 672, 1525, 3308, 3502, 3557, 4190, 4424
HapII CCGG 6 cut(s) 674, 1453, 1686, 4057, 4240, 4352
HgaI GACGC 6 cut(s) 323, 553, 749, 1124, 1449, 3125
HhaI GCGC 1 cut(s) 1079
Hin1I GRCGYC 1 cut(s) 564
Hin6I GCGC 1 cut(s) 1077
HinP1I GCGC 1 cut(s) 1077
HincII GTYRAC 5 cut(s) 492, 1206, 2518, 2950, 4312
HindII GTYRAC 5 cut(s) 492, 1206, 2518, 2950, 4312
HindIII AAGCTT 3 cut(s) 1978, 2014, 4129
HpaI GTTAAC 1 cut(s) 2950
HpaII CCGG 6 cut(s) 674, 1453, 1686, 4057, 4240, 4352
HphI GGTGA 8 cut(s) 206, 995, 2041, 2051, 2189, 2578, 2593, 3386
Hpy99I CGWCG 4 cut(s) 569, 3119, 3374, 3406
HpyCH4IV ACGT 4 cut(s) 1875, 2212, 3096, 3904
HpySE526I ACGT 4 cut(s) 1875, 2212, 3096, 3904
Hsp92I GRCGYC 1 cut(s) 564
HspAI GCGC 1 cut(s) 1077
Kpn2I TCCGGA 1 cut(s) 4056
KspAI GTTAAC 1 cut(s) 2950
LmnI GCTCC 4 cut(s) 2071, 3468, 4059, 4295
Lsp1109I GCAGC 6 cut(s) 133, 294, 415, 1432, 3893, 4379
LweI GCATC 8 cut(s) 456, 1793, 2104, 2503, 3658, 3933, 3955, 4404
MaeII ACGT 4 cut(s) 1875, 2212, 3096, 3904
MfeI CAATTG 5 cut(s) 18, 42, 218, 822, 2023
MflI RGATCY 4 cut(s) 679, 997, 1468, 1927
MhlI GDGCHC 3 cut(s) 54, 1553, 1750
MlsI TGGCCA 4 cut(s) 1525, 3308, 3502, 4190
MluNI TGGCCA 4 cut(s) 1525, 3308, 3502, 4190
MlyI GAGTC 6 cut(s) 842, 2748, 2915, 3068, 3346, 4039
MmeI TCCRAC 7 cut(s) 1706, 1905, 1959, 2646, 3343, 3716, 4180
Mox20I TGGCCA 4 cut(s) 1525, 3308, 3502, 4190
Mph1103I ATGCAT 5 cut(s) 1351, 1428, 3489, 3948, 4409
MroI TCCGGA 1 cut(s) 4056
MroXI GAANNNNTTC 5 cut(s) 681, 2160, 2478, 3807, 4364
MscI TGGCCA 4 cut(s) 1525, 3308, 3502, 4190
MslI CAYNNNNRTG 8 cut(s) 210, 2188, 2205, 2211, 2499, 2577, 3929, 4406
Msp20I TGGCCA 4 cut(s) 1525, 3308, 3502, 4190
MspA1I CMGCKG 4 cut(s) 1654, 1672, 3884, 4046
MspCI CTTAAG 1 cut(s) 2147
MspI CCGG 6 cut(s) 674, 1453, 1686, 4057, 4240, 4352
MspR9I CCNGG 6 cut(s) 470, 669, 674, 1686, 1965, 4353
MunI CAATTG 5 cut(s) 18, 42, 218, 822, 2023
Mva1269I GAATGC 4 cut(s) 284, 2699, 3166, 3489
MvaI CCWGG 3 cut(s) 470, 669, 1965
MvnI CGCG 1 cut(s) 435
NciI CCSGG 3 cut(s) 674, 1686, 4353
NcoI CCATGG 2 cut(s) 1106, 3672
NheI GCTAGC 1 cut(s) 2054
NlaIV GGNNCC 6 cut(s) 819, 999, 1659, 1668, 3032, 3594
NmuCI GTSAC 7 cut(s) 1063, 1417, 1571, 2029, 3527, 3922, 4327
NsiI ATGCAT 5 cut(s) 1351, 1428, 3489, 3948, 4409
NspI RCATGY 5 cut(s) 1128, 2108, 2210, 4407, 4411
PaeI GCATGC 2 cut(s) 2210, 4411
PaeR7I CTCGAG 1 cut(s) 126
PagI TCATGA 2 cut(s) 2169, 2911
PaqCI CACCTGC 1 cut(s) 971
PciI ACATGT 1 cut(s) 2104
PctI GAATGC 4 cut(s) 284, 2699, 3166, 3489
PdmI GAANNNNTTC 5 cut(s) 681, 2160, 2478, 3807, 4364
PflMI CCANNNNNTGG 1 cut(s) 1297
PkrI GCNGC 7 cut(s) 148, 284, 405, 1447, 3556, 3883, 4394
PleI GAGTC 6 cut(s) 841, 2748, 2915, 3068, 3345, 4038
PmaCI CACGTG 2 cut(s) 2213, 3905
PmlI CACGTG 2 cut(s) 2213, 3905
PpsI GAGTC 6 cut(s) 841, 2748, 2915, 3068, 3345, 4038
Ppu21I YACGTR 2 cut(s) 2213, 3905
PpuMI RGGWCCY 2 cut(s) 3031, 3592
PscI ACATGT 1 cut(s) 2104
PshBI ATTAAT 1 cut(s) 3122
PsiI TTATAA 2 cut(s) 2328, 2894
Psp1406I AACGTT 1 cut(s) 3096
Psp5II RGGWCCY 2 cut(s) 3031, 3592
Psp6I CCWGG 3 cut(s) 468, 667, 1963
PspCI CACGTG 2 cut(s) 2213, 3905
PspFI CCCAGC 4 cut(s) 1250, 1612, 3697, 3884
PspGI CCWGG 3 cut(s) 468, 667, 1963
PspN4I GGNNCC 6 cut(s) 819, 999, 1659, 1668, 3032, 3594
PspPI GGNCC 6 cut(s) 671, 2119, 3031, 3556, 3592, 3689
PspPPI RGGWCCY 2 cut(s) 3031, 3592
PspXI VCTCGAGB 1 cut(s) 126
PstNI CAGNNNCTG 3 cut(s) 1789, 2488, 4387
PsuI RGATCY 4 cut(s) 679, 997, 1468, 1927
PvuII CAGCTG 2 cut(s) 3884, 4046
RsaI GTAC 8 cut(s) 551, 913, 1289, 1437, 2628, 2875, 2967, 3390
RsaNI GTAC 8 cut(s) 550, 912, 1288, 1436, 2627, 2874, 2966, 3389
RseI CAYNNNNRTG 8 cut(s) 210, 2188, 2205, 2211, 2499, 2577, 3929, 4406
SalI GTCGAC 1 cut(s) 2516
SatI GCNGC 7 cut(s) 147, 283, 404, 1446, 3555, 3882, 4393
Sau96I GGNCC 6 cut(s) 671, 2119, 3031, 3556, 3592, 3689
ScaI AGTACT 1 cut(s) 3390
SchI GAGTC 6 cut(s) 842, 2748, 2915, 3068, 3346, 4039
ScrFI CCNGG 6 cut(s) 470, 669, 674, 1686, 1965, 4353
SduI GDGCHC 3 cut(s) 54, 1553, 1750
SfaNI GCATC 8 cut(s) 456, 1793, 2104, 2503, 3658, 3933, 3955, 4404
SfcI CTRYAG 3 cut(s) 741, 1942, 4034
Sfr274I CTCGAG 1 cut(s) 126
SinI GGWCC 4 cut(s) 2119, 3031, 3592, 3689
SlaI CTCGAG 1 cut(s) 126
SmiMI CAYNNNNRTG 8 cut(s) 210, 2188, 2205, 2211, 2499, 2577, 3929, 4406
SmlI CTYRAG 4 cut(s) 126, 1596, 2147, 3069
SmoI CTYRAG 4 cut(s) 126, 1596, 2147, 3069
SphI GCATGC 2 cut(s) 2210, 4411
SspI AATATT 2 cut(s) 3289, 3840
StyD4I CCNGG 6 cut(s) 468, 667, 672, 1684, 1963, 4351
StyI CCWWGG 3 cut(s) 1106, 2383, 3672
TaiI ACGT 4 cut(s) 1878, 2215, 3099, 3907
TatI WGTACW 3 cut(s) 2626, 2965, 3388
TauI GCSGC 1 cut(s) 3557
TscAI CASTG 9 cut(s) 253, 1074, 1262, 1335, 1668, 1794, 2959, 3309, 4425
TseFI GTSAC 7 cut(s) 1063, 1417, 1571, 2029, 3527, 3922, 4327
TseI GCWGC 6 cut(s) 146, 282, 403, 1445, 3881, 4392
Tsp45I GTSAC 7 cut(s) 1063, 1417, 1571, 2029, 3527, 3922, 4327
TspGWI ACGGA 5 cut(s) 567, 762, 2790, 3250, 3941
TspRI CASTG 9 cut(s) 253, 1074, 1262, 1335, 1668, 1794, 2959, 3309, 4425
Van91I CCANNNNNTGG 1 cut(s) 1297
Vha464I CTTAAG 1 cut(s) 2147
VneI GTGCAC 1 cut(s) 1549
VpaK11BI GGWCC 4 cut(s) 2119, 3031, 3592, 3689
VspI ATTAAT 1 cut(s) 3122
XbaI TCTAGA 2 cut(s) 881, 1183
XceI RCATGY 5 cut(s) 1128, 2108, 2210, 4407, 4411
XhoI CTCGAG 1 cut(s) 126
XmiI GTMKAC 2 cut(s) 2517, 4033
XmnI GAANNNNTTC 5 cut(s) 681, 2160, 2478, 3807, 4364
ZrmI AGTACT 1 cut(s) 3390
Zsp2I ATGCAT 5 cut(s) 1351, 1428, 3489, 3948, 4409
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.