Rh1BG234900

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
Physical Location & Seq
Forward (+)
35810295 .. 35816081
5787 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG234900.1

Sequence Viewer

Length: 3465 bp
ATGTTAACTTCTGATAAGATTAAGCAGAGAGGGTTTTTGCTTGGCATTTTAGGCCAAGATGAAACTTGGCTTTTATTTGAGAAGAAAGCAGGTGATGTTACTAAAGATCCCGCTATAAAATCCTTAGCAACTCAAGTAGCCCTAAGATGTGGAGGTTTGCCTGTTTTGGTTATCACAGTAGCAAGAGCTTTAGAAAATAGTTCTTTACCAATGTGGGAAGATGCCCTGAGATGCCTTGTCAGCTTTGATGAGAAAGAAGACTTGACAAAAAAAACTTACTCGGGTCTTGAATGGAGTTACACTCGATTGAATGAGCAGCTTAAGCCATTGTTCTTGTTGTGTGGTACTGCTATACAGGGAAACTCTATTTCTTTGACGAACTTATTGAAATATAGTATGGGTTTGGGTTTTTTTAAAGACCTTACAGTTGAAGCAGCTCGAAATGCATTGTACACACAAGTTGATAAACTTAAGAGTTCTTGTCTATTGCTAGACGGAGATGATAATACATGTGTCAGAATGCATGATCTTGTACATGATGTTGCTATCCGGATTGCATCTAAGGATCCACACGTCCTCGTAAAAGATGGAGTTGATCAGTTGAAAGAATGGCCAGACCAAGATTCATTTAAAAGGTGCAGTAAGATCTCCTGGTCCTGTTGCAATATCCCCAGTCTTCCTGAAGTACCTTGGAAATGTCCTGAGCTAGAAATGTTTCTTTTGCATGGTAATGGTAAAGGAAATGATCACCATTCGAAAATTCCAAGCAATTTTTTTGAAGAAATGCCAAAACTCAAGGTGTTGGATATTTGCAATCTGCCTCTTATGTCACTACCTCCATCTCTTGAATTGCTAAAAATCAATCTTCAAACATTGTGTTTAGATGGATGCACGTTGGAAGACATAGCTCGAGTTGGAGAGCTAAGCAACTTGGAAACTCTTAGCTTTGCTAACTCTAAGGTCAAAAAGTTGCCGAAAGAAATAGCGAAATTGACTCATTTGCGGTTGTTGGACTTGTCGGATTGCCCTGAGCTTGAAGTGATTTCACCTAATGTCATATCAAGTTTGACAAGGCTCGAAGACTTGAGAATGAAAAACAGTTTTGAAAAATGGGAGGCTGAGGGAGACATCAGCGAAAGAAAGAATGCTAGTCTTTTGGAGCTGAAGCAGTTATCTCGACTAACTGCATTAGAAATATATATTCCAGATGTTGATATTCTTCCACCAAACTTGTTCTCCAATATGCTGAAAAGATATCATATATATATTGGTGTGTGGAAAAGCAGGTATCCGTGGGAGAAAACTATGGCTGAAACGACCCTCAATACACTAAAGCTCGAGCTCACTCCCAGCAATCAATCGGATCAAGGGCTAAGAAGGCTGATGATGAGATCTGAAGATTTGGCCTTGGATGTGATGGAAGGTGTTAATAATAGTTTGTATCAATTAGACAACGAAGGTTCTCTGCACCTGAAACGTCTCCAACTCCAAAAGAATGTTGATCTTACATATATCATTAACAAGAAGGTTGTGTTCCCCAACTTAACAACCTTGATCATTCAAAAATGTGATCATTTGAGATTCTTGTTCTCATGTTCTATGGCCAAAAGTTTCGTAAAGCTCAAACATCTTGAGATACGCAACTGCAACAGCATGGAAGAGGTAGTGTCATCAACAACAGATTACAATGAAGAAAATATGAATAATATGTTCTGTAAGCTTGAAACTCTGGAACTGGAAGAACTTCCATGCCTCGGTAGAATCTGCACAGGTACTCGTATTGAATTTCCGTCCTTGAAGAAGTTGGTTATATGGCGTTGTGAAAAATTGAAGGCATTAATCTGTGACCCTATGAGTGATAAAAGTACAAGAATCTGCAAAGAAATTGAAGAGAGGGAGTCAGAGGAGAGCCCTAGTGTTGAACATGAGAGTGTTGCAGAACGCTGCCTTTTTAACGACAAGGTAAGATTTCCTAGCTTGGAGGAATTGGAAATCTATCACTTGGACGAGTTGCAGACAATATGGCACAATAACCAACTTGCTGATCAATACTCTTTTTGCCGACTCAAACAAGTTTACGTAAGAGATTGCAAGAGTCTGATAAGTATATTTCCGCCTAGTATCATGGGGAGATTGAATGCTCTGGAAAGATTAGACATAGATACTTGCAACTCACTAAAAGTGGTATTTGAAGTCGGAGGAATTAATGTTGAAGAGACACGTGTCAACAGATCATCCCCTTATGACCAGTGGAAACCTTTGTACTGTCAAAATCTTGAATTCTTGAGCGTATTCGGTGCTGACAGTTTGAAAAATATATTCCCAGCCTCTTTGGCCAGAGGACTTCAGCAGCTACGAATTCTGTGGGTGGAGTCTTGTCGTGATCTGCTGGAAATAGTTGGTGAGGAAGAGGGAGGAGTAGAATTACCAACGCCTCCTCAGTTTGTGTTCCCAAAGGCAACACGTGTGACATTGGACTCTCTGCCCCAACTTAAGAGTTTTTATCCGGGAAAGCATACTTCCACGTGGCCATTACTCAAACAATTGATAGTACAATTACAAAGCGGAATTAATGAGGTAGAAATTTCAATGTTTCAGGATAAACATGAGTCGGGCCCAGTAAAGTCTATCTTTCCAATTGACAAGGATTCATTCCCCAAATTGGAAGAATTGTCCGTGTACAACATGGATATTTGGCACGGTACATCCCCAGTACCAACAGAGTCGTTCAGCAACCTAAAATATATTAAATTTCGTTATTGGGCACCTTTCTCCCGGCAAGCTACATCACTCTTCCTTCAGAAATTACACAATATTGAAAGAATTGAAGTGAATGGGGCTCCTCCCGAAGAAATATTTGTCAGTGAAGGAAACAGTAGTTGTGAGGAAATACATGCAGTTGGGACCCTACCAAGCATACGAATTTTAAAGTTTGACGGGTGCAAAATGTTGCATCTAGGGAAGGAGAACTCAATTTTTCCAAACTTGGAAGTTCTAGAGGTGACGCATCATTCTCTCGGATTAAAGAATTTGGAATCATCAGCGATTTCCTTCCGGAATTTAACAACTTTGAAAGTAGTTGATTGTCCGGGTTTGGAACATTTAATAACTTATTCAGTGGCTAAAAGCTTAATGCAACTGACAACAATGAAAGTGAGTGATTGTCCAAGAATTGCAGTCATAGTGACAACAGACGGTGATGATGCAGCAGAAGAGATTACTTTCAGTCGATTGCAAGTTTTAACCCTTCGTGGACTGCCAAAAATGCAAGGCTTTTGCTCCGGAAGTTGCATTGTGAATCTCCCATCCTTGACTACTTTATCCATGAGCAACCGCCTTAAATTGAAGATTTTCCAAGAAAAGCTAAAGATAACAAGCAAGTACCCTGACACGGAGGAGGAGGAGGAAGACAATGTGGATGAGGAAATAGGCGTGCCGAGTGTTGAAATAAATATTGCAAGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1154

Amino Acids

131.07

Weight (kDa)

5.48

Isoelectric Point (pI)

43.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 258 - 588 2e-08 Leucine-rich repeat region
LRR_RPS2 PF23247 492 - 614 7.2e-17 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 656 - 724 3.3e-15 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 660 - 740 3.4e-15 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 754 - 794 2.5e-06 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1010 - 1113 4.5e-09 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 80
Acc36I ACCTGC 2 cut(s) 80, 1275
AccB1I GGYRCC 1 cut(s) 2764
AccIII TCCGGA 3 cut(s) 549, 3054, 3281
AciI CCGC 5 cut(s) 111, 1003, 2114, 2565, 3334
AclWI GGATC 4 cut(s) 101, 560, 573, 1371
AcoI YGGCCR 4 cut(s) 611, 1602, 2334, 2528
AcsI RAATTY 9 cut(s) 759, 1784, 2279, 2358, 2583, 2750, 2922, 3028, 3058
AcuI CTGAAG 5 cut(s) 702, 1184, 1416, 2330, 2783
AcvI CACGTG 3 cut(s) 2222, 2465, 2526
AfiI CCNNNNNNNGG 3 cut(s) 1754, 2662, 3391
AflII CTTAAG 3 cut(s) 320, 470, 2492
AflIII ACRYGT 6 cut(s) 509, 571, 2219, 2221, 2462, 2464
AjiI CACGTC 1 cut(s) 574
AjnI CCWGG 1 cut(s) 650
Alw21I GWGCWC 1 cut(s) 1344
Alw26I GTCTC 3 cut(s) 1119, 1484, 2210
AlwI GGATC 4 cut(s) 101, 560, 573, 1371
Ama87I CYCGRG 3 cut(s) 280, 909, 1337
Aor13HI TCCGGA 3 cut(s) 549, 3054, 3281
AoxI GGCC 7 cut(s) 52, 611, 1404, 1602, 2334, 2528, 2614
ApaI GGGCCC 1 cut(s) 2618
ApeKI GCWGC 5 cut(s) 316, 434, 1944, 2350, 3206
ApoI RAATTY 9 cut(s) 759, 1784, 2279, 2358, 2583, 2750, 2922, 3028, 3058
AseI ATTAAT 3 cut(s) 1838, 2205, 2571
Asp700I GAANNNNTTC 3 cut(s) 714, 1743, 3350
AspS9I GGNCC 4 cut(s) 654, 2614, 2615, 2904
AsuC2I CCSGG 3 cut(s) 2508, 2776, 3090
AsuHPI GGTGA 6 cut(s) 104, 740, 1038, 2414, 3013, 3209
AsuII TTCGAA 1 cut(s) 755
AvaI CYCGRG 3 cut(s) 280, 909, 1337
AvaII GGWCC 2 cut(s) 654, 2904
BaeGI GKGCMC 2 cut(s) 2618, 2767
BalI TGGCCA 4 cut(s) 613, 1604, 2336, 2530
BamHI GGATCC 1 cut(s) 565
BanI GGYRCC 1 cut(s) 2764
BanII GRGCYC 4 cut(s) 1344, 1913, 2618, 2842
BbrPI CACGTG 3 cut(s) 2222, 2465, 2526
BbsI GAAGAC 5 cut(s) 264, 668, 906, 1086, 3414
Bbv12I GWGCWC 1 cut(s) 1344
BbvCI CCTCAGC 1 cut(s) 1119
BbvI GCAGC 5 cut(s) 328, 446, 1931, 2362, 3218
BccI CCATC 5 cut(s) 581, 847, 878, 1411, 3313
BcgI CGANNNNNNTGC 2 cut(s) 1157, 1191
BciT130I CCWGG 1 cut(s) 652
BciVI GTATCC 1 cut(s) 1299
BclI TGATCA 5 cut(s) 595, 745, 1554, 1570, 2044
BcnI CCSGG 3 cut(s) 2508, 2776, 3090
BcoDI GTCTC 3 cut(s) 1119, 1484, 2210
BfaI CTAG 9 cut(s) 491, 707, 1149, 1914, 1974, 2118, 2957, 2996, 3463
BfrI CTTAAG 3 cut(s) 320, 470, 2492
BfuAI ACCTGC 2 cut(s) 80, 1275
BfuI GTATCC 1 cut(s) 1299
BglI GCCNNNNNGGC 1 cut(s) 2333
BglII AGATCT 2 cut(s) 645, 1391
BisI GCNGC 5 cut(s) 317, 435, 1945, 2351, 3207
BlpI GCTNAGC 1 cut(s) 923
BlsI GCNGC 5 cut(s) 318, 436, 1946, 2352, 3208
Bme1390I CCNGG 4 cut(s) 652, 2508, 2776, 3090
Bme18I GGWCC 2 cut(s) 654, 2904
BmeT110I CYCGRG 3 cut(s) 280, 909, 1337
BmgBI CACGTC 1 cut(s) 574
BmgT120I GGNCC 4 cut(s) 654, 2614, 2615, 2904
BmiI GGNNCC 6 cut(s) 567, 2616, 2766, 2841, 2905, 2906
BmrFI CCNGG 4 cut(s) 652, 2508, 2776, 3090
BmrI ACTGGG 3 cut(s) 666, 2612, 2705
BmsI GCATC 7 cut(s) 211, 221, 566, 878, 2962, 3016, 3193
BmuI ACTGGG 3 cut(s) 666, 2612, 2705
BoxI GACNNNNGTC 1 cut(s) 2222
BpiI GAAGAC 5 cut(s) 264, 668, 906, 1086, 3414
BplI GAGNNNNNCTC 2 cut(s) 286, 318
Bpu10I CCTNAGC 4 cut(s) 124, 702, 1029, 1119
Bpu1102I GCTNAGC 1 cut(s) 923
Bpu14I TTCGAA 1 cut(s) 755
BpuEI CTTGAG 5 cut(s) 117, 779, 1105, 1652, 2305
BpuMI CCSGG 3 cut(s) 2508, 2776, 3090
BsaAI YACGTR 4 cut(s) 2080, 2222, 2465, 2526
BsaJI CCNNGG 4 cut(s) 689, 1292, 1407, 1753
BsaWI WCCGGW 3 cut(s) 549, 3054, 3281
BsaXI ACNNNNNCTCC 2 cut(s) 1220, 1250
Bsc4I CCNNNNNNNGG 3 cut(s) 1754, 2662, 3391
Bse1I ACTGG 5 cut(s) 672, 1740, 2248, 2618, 2711
BseAI TCCGGA 3 cut(s) 549, 3054, 3281
BseBI CCWGG 1 cut(s) 652
BseDI CCNNGG 4 cut(s) 689, 1292, 1407, 1753
BseGI GGATG 6 cut(s) 893, 1417, 2234, 2705, 3305, 3424
BseLI CCNNNNNNNGG 3 cut(s) 1754, 2662, 3391
BseMII CTCAG 5 cut(s) 218, 693, 1020, 1110, 2453
BseNI ACTGG 5 cut(s) 672, 1740, 2248, 2618, 2711
BseRI GAGGAG 7 cut(s) 1919, 2427, 2430, 2832, 3410, 3413, 3416
BseSI GKGCMC 2 cut(s) 2618, 2767
BseXI GCAGC 5 cut(s) 328, 446, 1931, 2362, 3218
BseYI CCCAGC 2 cut(s) 1349, 2323
BsgI GTGCAG 3 cut(s) 658, 1451, 1750
BshFI GGCC 7 cut(s) 54, 613, 1406, 1604, 2336, 2530, 2616
BshNI GGYRCC 1 cut(s) 2764
BsiHKAI GWGCWC 1 cut(s) 1344
BsiHKCI CYCGRG 3 cut(s) 280, 909, 1337
BsiSI CCGG 6 cut(s) 550, 2507, 2776, 3055, 3089, 3282
BslFI GGGAC 1 cut(s) 2917
BslI CCNNNNNNNGG 3 cut(s) 1754, 2662, 3391
BsmAI GTCTC 3 cut(s) 1119, 1484, 2210
BsmBI CGTCTC 1 cut(s) 1484
BsmFI GGGAC 1 cut(s) 2917
BsmI GAATGC 3 cut(s) 525, 1150, 2143
BsnI GGCC 7 cut(s) 54, 613, 1406, 1604, 2336, 2530, 2616
BsoBI CYCGRG 3 cut(s) 280, 909, 1337
Bsp119I TTCGAA 1 cut(s) 755
Bsp120I GGGCCC 1 cut(s) 2614
Bsp1286I GDGCHC 5 cut(s) 1344, 1913, 2618, 2767, 2842
Bsp13I TCCGGA 3 cut(s) 549, 3054, 3281
Bsp1407I TGTACA 3 cut(s) 450, 532, 2679
Bsp1720I GCTNAGC 1 cut(s) 923
BspACI CCGC 5 cut(s) 111, 1003, 2114, 2565, 3334
BspANI GGCC 7 cut(s) 54, 613, 1406, 1604, 2336, 2530, 2616
BspCNI CTCAG 5 cut(s) 219, 694, 1021, 1111, 2452
BspEI TCCGGA 3 cut(s) 549, 3054, 3281
BspLI GGNNCC 6 cut(s) 567, 2616, 2766, 2841, 2905, 2906
BspMI ACCTGC 2 cut(s) 80, 1275
BspPI GGATC 4 cut(s) 101, 560, 573, 1371
BspT104I TTCGAA 1 cut(s) 755
BspT107I GGYRCC 1 cut(s) 2764
BspTI CTTAAG 3 cut(s) 320, 470, 2492
BsrGI TGTACA 3 cut(s) 450, 532, 2679
BsrI ACTGG 5 cut(s) 672, 1740, 2248, 2618, 2711
BssECI CCNNGG 4 cut(s) 689, 1292, 1407, 1753
BssT1I CCWWGG 2 cut(s) 689, 1407
Bst2UI CCWGG 1 cut(s) 652
Bst4CI ACNGT 8 cut(s) 178, 427, 1100, 2267, 2306, 2702, 2876, 3197
Bst6I CTCTTC 6 cut(s) 1653, 1884, 2208, 2403, 2798, 3207
BstAFI CTTAAG 3 cut(s) 320, 470, 2492
BstAUI TGTACA 3 cut(s) 450, 532, 2679
BstBAI YACGTR 4 cut(s) 2080, 2222, 2465, 2526
BstBI TTCGAA 1 cut(s) 755
BstC8I GCNNGC 3 cut(s) 2781, 3434, 3460
BstDSI CCRYGG 1 cut(s) 1292
BstF5I GGATG 6 cut(s) 893, 1417, 2234, 2705, 3305, 3424
BstMAI GTCTC 3 cut(s) 1119, 1484, 2210
BstMWI GCNNNNNNNGC 7 cut(s) 51, 240, 322, 443, 1378, 2333, 3265
BstNI CCWGG 1 cut(s) 652
BstNSI RCATGY 2 cut(s) 513, 2897
BstPAI GACNNNNGTC 1 cut(s) 2222
BstSCI CCNGG 4 cut(s) 650, 2506, 2774, 3088
BstSLI GKGCMC 2 cut(s) 2618, 2767
BstSNI TACGTA 1 cut(s) 2080
BstV1I GCAGC 5 cut(s) 328, 446, 1931, 2362, 3218
BstV2I GAAGAC 5 cut(s) 264, 668, 906, 1086, 3414
BstX2I RGATCY 4 cut(s) 106, 565, 645, 1391
BstYI RGATCY 4 cut(s) 106, 565, 645, 1391
BsuI GTATCC 1 cut(s) 1299
BsuRI GGCC 7 cut(s) 54, 613, 1406, 1604, 2336, 2530, 2616
BtgI CCRYGG 1 cut(s) 1292
BtrI CACGTC 1 cut(s) 574
BtsCI GGATG 6 cut(s) 893, 1417, 2234, 2705, 3305, 3424
BtsIMutI CAGTG 3 cut(s) 2255, 2869, 3123
BveI ACCTGC 2 cut(s) 80, 1275
Cac8I GCNNGC 3 cut(s) 2781, 3434, 3460
Cfr13I GGNCC 4 cut(s) 654, 2614, 2615, 2904
CseI GACGC 1 cut(s) 3013
CspCI CAANNNNNGTGG 2 cut(s) 1212, 1247
DraI TTTAAA 3 cut(s) 415, 631, 2928
EaeI YGGCCR 4 cut(s) 611, 1602, 2334, 2528
Eam1104I CTCTTC 6 cut(s) 1653, 1884, 2208, 2403, 2798, 3207
EarI CTCTTC 6 cut(s) 1653, 1884, 2208, 2403, 2798, 3207
EciI GGCGGA 1 cut(s) 2103
Ecl136II GAGCTC 1 cut(s) 1342
Eco105I TACGTA 1 cut(s) 2080
Eco130I CCWWGG 2 cut(s) 689, 1407
Eco24I GRGCYC 4 cut(s) 1344, 1913, 2618, 2842
Eco32I GATATC 1 cut(s) 1256
Eco47I GGWCC 2 cut(s) 654, 2904
Eco53kI GAGCTC 1 cut(s) 1342
Eco57I CTGAAG 5 cut(s) 702, 1184, 1416, 2330, 2783
Eco72I CACGTG 3 cut(s) 2222, 2465, 2526
Eco88I CYCGRG 3 cut(s) 280, 909, 1337
EcoICRI GAGCTC 1 cut(s) 1342
EcoO109I RGGNCCY 1 cut(s) 2904
EcoRI GAATTC 2 cut(s) 2279, 2358
EcoRII CCWGG 1 cut(s) 650
EcoRV GATATC 1 cut(s) 1256
EcoT14I CCWWGG 2 cut(s) 689, 1407
EcoT22I ATGCAT 2 cut(s) 448, 525
EcoT38I GRGCYC 4 cut(s) 1344, 1913, 2618, 2842
ErhI CCWWGG 2 cut(s) 689, 1407
Esp3I CGTCTC 1 cut(s) 1484
FalI AAGNNNNNCTT 2 cut(s) 2615, 2647
FaqI GGGAC 1 cut(s) 2917
FauI CCCGC 1 cut(s) 118
FbaI TGATCA 5 cut(s) 595, 745, 1554, 1570, 2044
Fnu4HI GCNGC 5 cut(s) 317, 435, 1945, 2351, 3207
FokI GGATG 6 cut(s) 900, 1424, 2221, 2692, 3292, 3431
FriOI GRGCYC 4 cut(s) 1344, 1913, 2618, 2842
Fsp4HI GCNGC 5 cut(s) 317, 435, 1945, 2351, 3207
FspBI CTAG 9 cut(s) 491, 707, 1149, 1914, 1974, 2118, 2957, 2996, 3463
GluI GCNGC 5 cut(s) 317, 435, 1945, 2351, 3207
GsaI CCCAGC 2 cut(s) 1353, 2327
HaeIII GGCC 7 cut(s) 54, 613, 1406, 1604, 2336, 2530, 2616
HapII CCGG 6 cut(s) 550, 2507, 2776, 3055, 3089, 3282
HgaI GACGC 1 cut(s) 3013
HincII GTYRAC 2 cut(s) 6, 2227
HindII GTYRAC 2 cut(s) 6, 2227
HindIII AAGCTT 2 cut(s) 1718, 3127
HpaI GTTAAC 1 cut(s) 6
HpaII CCGG 6 cut(s) 550, 2507, 2776, 3055, 3089, 3282
HphI GGTGA 6 cut(s) 104, 740, 1038, 2414, 3013, 3209
Hpy166II GTNNAC 6 cut(s) 6, 453, 2077, 2227, 2680, 3254
Hpy8I GTNNAC 6 cut(s) 6, 453, 2077, 2227, 2680, 3254
HpyCH4III ACNGT 8 cut(s) 178, 427, 1100, 2267, 2306, 2702, 2876, 3197
HpyCH4IV ACGT 7 cut(s) 573, 893, 1477, 2079, 2221, 2464, 2525
HpyF10VI GCNNNNNNNGC 7 cut(s) 51, 240, 322, 443, 1378, 2333, 3265
HpySE526I ACGT 7 cut(s) 573, 893, 1477, 2079, 2221, 2464, 2525
KflI GGGWCCC 1 cut(s) 2904
Kpn2I TCCGGA 3 cut(s) 549, 3054, 3281
Ksp22I TGATCA 5 cut(s) 595, 745, 1554, 1570, 2044
KspAI GTTAAC 1 cut(s) 6
LmnI GCTCC 3 cut(s) 1159, 2845, 3284
Lsp1109I GCAGC 5 cut(s) 328, 446, 1931, 2362, 3218
LweI GCATC 7 cut(s) 211, 221, 566, 878, 2962, 3016, 3193
MaeI CTAG 9 cut(s) 491, 707, 1149, 1914, 1974, 2118, 2957, 2996, 3463
MaeII ACGT 7 cut(s) 573, 893, 1477, 2079, 2221, 2464, 2525
MaeIII GTNAC 7 cut(s) 97, 296, 828, 1844, 2467, 3001, 3184
MfeI CAATTG 2 cut(s) 2543, 2637
MflI RGATCY 4 cut(s) 106, 565, 645, 1391
MhlI GDGCHC 5 cut(s) 1344, 1913, 2618, 2767, 2842
MlsI TGGCCA 4 cut(s) 613, 1604, 2336, 2530
MluNI TGGCCA 4 cut(s) 613, 1604, 2336, 2530
MlyI GAGTC 8 cut(s) 988, 1907, 2058, 2104, 2381, 2471, 2618, 2732
MmeI TCCRAC 7 cut(s) 783, 876, 895, 990, 999, 1507, 2176
Mox20I TGGCCA 4 cut(s) 613, 1604, 2336, 2530
Mph1103I ATGCAT 2 cut(s) 448, 525
MroI TCCGGA 3 cut(s) 549, 3054, 3281
MroXI GAANNNNTTC 3 cut(s) 714, 1743, 3350
MscI TGGCCA 4 cut(s) 613, 1604, 2336, 2530
MslI CAYNNNNRTG 2 cut(s) 729, 1929
Msp20I TGGCCA 4 cut(s) 613, 1604, 2336, 2530
MspCI CTTAAG 3 cut(s) 320, 470, 2492
MspI CCGG 6 cut(s) 550, 2507, 2776, 3055, 3089, 3282
MspR9I CCNGG 4 cut(s) 652, 2508, 2776, 3090
MunI CAATTG 2 cut(s) 2543, 2637
Mva1269I GAATGC 3 cut(s) 525, 1150, 2143
MvaI CCWGG 1 cut(s) 652
MwoI GCNNNNNNNGC 7 cut(s) 51, 240, 322, 443, 1378, 2333, 3265
NciI CCSGG 3 cut(s) 2508, 2776, 3090
NlaIV GGNNCC 6 cut(s) 567, 2616, 2766, 2841, 2905, 2906
NmeAIII GCCGAG 1 cut(s) 3462
NmuCI GTSAC 5 cut(s) 828, 1844, 2467, 3001, 3184
NsiI ATGCAT 2 cut(s) 448, 525
NspI RCATGY 2 cut(s) 513, 2897
NspV TTCGAA 1 cut(s) 755
PaeR7I CTCGAG 2 cut(s) 909, 1337
PaqCI CACCTGC 1 cut(s) 80
PciI ACATGT 1 cut(s) 509
PctI GAATGC 3 cut(s) 525, 1150, 2143
PdmI GAANNNNTTC 3 cut(s) 714, 1743, 3350
PfeI GAWTC 7 cut(s) 623, 1581, 1761, 1872, 2648, 3035, 3298
PfoI TCCNGGA 1 cut(s) 2506
PkrI GCNGC 5 cut(s) 318, 436, 1946, 2352, 3208
PleI GAGTC 8 cut(s) 988, 1906, 2058, 2103, 2380, 2471, 2617, 2731
PmaCI CACGTG 3 cut(s) 2222, 2465, 2526
PmlI CACGTG 3 cut(s) 2222, 2465, 2526
PpsI GAGTC 8 cut(s) 988, 1906, 2058, 2103, 2380, 2471, 2617, 2731
Ppu21I YACGTR 4 cut(s) 2080, 2222, 2465, 2526
PpuMI RGGWCCY 1 cut(s) 2904
PscI ACATGT 1 cut(s) 509
PshAI GACNNNNGTC 1 cut(s) 2222
PshBI ATTAAT 3 cut(s) 1838, 2205, 2571
Psp124BI GAGCTC 1 cut(s) 1344
Psp5II RGGWCCY 1 cut(s) 2904
Psp6I CCWGG 1 cut(s) 650
PspCI CACGTG 3 cut(s) 2222, 2465, 2526
PspFI CCCAGC 2 cut(s) 1349, 2323
PspGI CCWGG 1 cut(s) 650
PspN4I GGNNCC 6 cut(s) 567, 2616, 2766, 2841, 2905, 2906
PspOMI GGGCCC 1 cut(s) 2614
PspPI GGNCC 4 cut(s) 654, 2614, 2615, 2904
PspPPI RGGWCCY 1 cut(s) 2904
PspXI VCTCGAGB 2 cut(s) 909, 1337
PsuI RGATCY 4 cut(s) 106, 565, 645, 1391
RseI CAYNNNNRTG 2 cut(s) 729, 1929
SacI GAGCTC 1 cut(s) 1344
SatI GCNGC 5 cut(s) 317, 435, 1945, 2351, 3207
Sau96I GGNCC 4 cut(s) 654, 2614, 2615, 2904
SchI GAGTC 8 cut(s) 988, 1907, 2058, 2104, 2381, 2471, 2618, 2732
ScrFI CCNGG 4 cut(s) 652, 2508, 2776, 3090
SduI GDGCHC 5 cut(s) 1344, 1913, 2618, 2767, 2842
SfaNI GCATC 7 cut(s) 211, 221, 566, 878, 2962, 3016, 3193
Sfr274I CTCGAG 2 cut(s) 909, 1337
SfuI TTCGAA 1 cut(s) 755
SinI GGWCC 2 cut(s) 654, 2904
SlaI CTCGAG 2 cut(s) 909, 1337
SmiMI CAYNNNNRTG 2 cut(s) 729, 1929
SnaBI TACGTA 1 cut(s) 2080
SsiI CCGC 5 cut(s) 111, 1003, 2114, 2565, 3334
SspI AATATT 3 cut(s) 2815, 2856, 3454
SspMI CTAG 9 cut(s) 491, 707, 1149, 1914, 1974, 2118, 2957, 2996, 3463
SstI GAGCTC 1 cut(s) 1344
StyD4I CCNGG 4 cut(s) 650, 2506, 2774, 3088
StyI CCWWGG 2 cut(s) 689, 1407
TaaI ACNGT 8 cut(s) 178, 427, 1100, 2267, 2306, 2702, 2876, 3197
TaiI ACGT 7 cut(s) 576, 896, 1480, 2082, 2224, 2467, 2528
TaqI TCGA 8 cut(s) 304, 439, 755, 910, 1077, 1177, 1338, 3229
TatI WGTACW 6 cut(s) 450, 532, 1865, 2262, 2551, 2679
TfiI GAWTC 7 cut(s) 623, 1581, 1761, 1872, 2648, 3035, 3298
TscAI CASTG 3 cut(s) 2255, 2869, 3123
TseFI GTSAC 5 cut(s) 828, 1844, 2467, 3001, 3184
TseI GCWGC 5 cut(s) 316, 434, 1944, 2350, 3206
Tsp45I GTSAC 5 cut(s) 828, 1844, 2467, 3001, 3184
TspDTI ATGAA 7 cut(s) 75, 615, 1106, 1704, 1715, 2640, 3164
TspGWI ACGGA 5 cut(s) 510, 1281, 1779, 2665, 3407
TspRI CASTG 3 cut(s) 2255, 2869, 3123
Vha464I CTTAAG 3 cut(s) 320, 470, 2492
VpaK11BI GGWCC 2 cut(s) 654, 2904
VspI ATTAAT 3 cut(s) 1838, 2205, 2571
XapI RAATTY 9 cut(s) 759, 1784, 2279, 2358, 2583, 2750, 2922, 3028, 3058
XbaI TCTAGA 1 cut(s) 2995
XceI RCATGY 2 cut(s) 513, 2897
XhoI CTCGAG 2 cut(s) 909, 1337
XmnI GAANNNNTTC 3 cut(s) 714, 1743, 3350
XspI CTAG 9 cut(s) 491, 707, 1149, 1914, 1974, 2118, 2957, 2996, 3463
Zsp2I ATGCAT 2 cut(s) 448, 525
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.