Rh2AG203700

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0000042
Physical Location & Seq
Reverse (-)
20571139 .. 20586177
15039 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG203700.1

Sequence Viewer

Length: 7485 bp
ATGGAGATCCTTACTGCAATTGTCGGAGCTGTTGCCGACTACACAGTTGGCCCTATTATTCGGCAAGGGGGTTATATAATTCATTGCAAACGCAACATTCGGACACTACAGACTCGTGTGGAGGATCTTAAGGCTGCCAGAGGACGGGTTGATGTTGAGATTGATGAAGCTGATAGAAAAGGAGAACACATCTATCCTGATGTCAAGCAGTGGATAACAAAGGTTGAAGAGATCGCTGGAAAGGCAGACGAATTATTGAAAGATGAACACCAAGCAAAGATGAATTGTATGCATGGTTTTTGTCCTAATCTGTTGACTCGTCAACAGCTAAGCAGAAAATCAACAAAATTGGTGGAAGTGGTTCTGGAATTCCAGGGAAAAGTAGTAAATTTTCCCAGTATCTCATATGGCGGTCGCACTGAAGTGGTATTTCTCACTTCTACCAAAGATTATGAGGCATTTGATTCAAGGATTTTAACTCTGAACGGAATCATGGATGAATTGAAAAATCCTGATATCAACAAGATTGGGGTGTATGGTATTGCAGGGGTGGGGAAGACCACACTGGCAGAAGAAGTTGTTAGGCAAGTTATAAAAGATGAGTCATTTGATGATGTTGTCATTGTTCGAGATGTGAAAGAATATCCAGATATTGAAAGAATTCAAAAAGAAATTGCTGAACAGTTAGGTATGGATGTCTTCAAAGATCAATCTAGAACTGCAATGGCGGGTCGAATATATGACAGGTTAAAAAACAAGAAGACTTTTCTAGTTTTAGATGATATTTGGAATTTCTTTGATTTAAAAGTTGTGGGACTTCCCGACGTGGCAACTTGTAAAATATTGTTCACATCTAGAAGTGGAGAAGTATTATGCACTCAGATGGGTACACAAAAAGAGTTTCAGCTTGCCGCCTTAGAAGAACAGGAATGTTGGAGTTTATTTGAAAGCAAGCTGGGTGATGTTGTTAGAGATCCCAAGATACTAACTGTAGCAACCCAAGTAGCCAAAAAATGTGGTGGTTTGCCAATTTTGGTTGTCACAATTGCAAGTGCGTTAAAAAAAGGTACTCTACCCGAGTGGGAGGATGCTCTGAGACGCCTTGAAACGTTTCAGAATACAGGATCAATCAAACAAGCATTCTTGGCTCTAGAGTGGATTTACGATAAATTGGATGATGAAGAGCTTCAGTCATTGTTCTTACTGTCTGGAGTTACAACATGGGAGAACTCCATCTTTCTCGATGACTTATTGAAACTTGCAGTGGGGTTGGATTTGCTTAAAGGCGTTAACACAATGAAAGAAGCACGAAATTCATTGCTGTCATTGGTTAAAAAGCTGAAAAATTTTTGTCTATTGCTAGACGATAATGGTGACACATCTGTTAGAATGCATGATCTTGTCAATGATGTTGCTAAGGAAATTGCATCTAGGGATCAACAACTCTTATCAGTAGCATGCGGAGCTGAGTTGAAAAATTGGCCAAAAACCTCAAAGTGCGGTAAGATCTCAATCAAATCCGACAGTCTCGCTAAACTTTCTGAAGTTTTGGAATGCCAAAAATTAGAAATGTTCCATCTGCATTGTGAAGACGAGCAACCACTCCAAGTCCCAAACGGTCTTTTTGCAAACATGGAAAAACTCAAAGTGTTGAGTTTAATGAATGTGAAGAATCTTGCATCTCTTGGGTTCTTGAAGAATCTTCAGGCTTTGTGTTTAGATCGATGCGAGATGGAAGACATAGCTGTAGTTGGAGAGCTAAGGAAATTAGAAATTCTCAGTTTGGGATACACCAATATGAAACAACTGCCTAAAGAAATTGGAGAATTGACTTGTCTACGATTGTTGGATTTGACCCGTTGCTATTCCCTTCAAGTGATTGCACCTAATGTTTTATCAAGGTTGACGAGACTAGAAGACTTGAGAATGAGAAACAGCTCTATCAAATGGGAGGCTGAACAGGAAGGTGAAAGAAGTAATGCTAGTCTCTCGGAGCTGAAGCACTTGTCTCTACTAACTGCATTGGAAATAAATATTCCAAATCCTGGTATGCTTCCAAAGGACTTGTTCTCCGATAAATTAGAAAGATTCCATATATGCATTGGCGATCACTCTTGGGAAGGATGGGGCATAAATACATTGAGACTCCAGTTCACTACTGGCGACGAATTGGACCAAGGTCTAAAGATGTTGGTGAAGGGATCTGAATATTTGACTTTACAAGGGGGAGCGAATGTTAATGAAACTGCCTTTGGATTAGAAGGCGACAATTTTCGGCAATTAAAGCATCTTCAACTCAGGAAACTAGATACTACATACATCATTAATTCGAAGTTTGTGTTTTCCAGTTTAACAACCTTGGAAGTGACTGACTGTGATGGTATAAAATTCTTGTTCTCGTCTTCAATGGCCAGAAGTCTAATTCAACTCAAAACTCTCACCATAAGTCGATGTAGAAGCATGGTGGTGATAGTATCCACACAAGAAGACGACGAAGAAAACAATATAGTTAACATGTTTTATAGACTAGAATTTCTGACATTAAGAGAGCTTCCAAGCTTGGTTGGATTCTGCTCAGGAAGTTATGTTGGATTTTCATCATTAGAGGAGGCACTCATATCTAATGGTCAGAGTAAAAGTACTACAATCACGAAAGAAATTGAAGATGGAGACTCGAAGGATCACCTAGGTGTTGACAATGATGTACGTTACTTTCTTTTTGATGAAAAGGTAACATTTCCTAGCTTGGAGAGATTACGGCTCGAAGAGCTACCTAAGTTGGAGGCAGTATGGCATAACCAACTTGCTCCAGACTCTTTTTGCAGGATTATAAAAGTTAGAGTTGACAGTTGCCCCAGTTTAATAAAACTCTTTGTGCCTTGTATCATGGAAAGATTAGATGCTCTAAAAACCTTGAGGGTGTGGTCCTGCCCGTTACTAGAAGTGGTATTCAAATGTGGAAGACTAAAATTTAAAGAGACACATGACCCATCAACCAAAGAGTTGAAAACTTTCAACTGCTGTCCCAATCTAGAAAAATTTAGCATACAATGCTCTGACGGATTGAAATACATTTTTCAGACAGAAGATAGGCTGGAAATTGTGCCAAAGTTTGTGTTCCCAAAAGTAACAAAACTTTTGCTTTTGAACCTGCCCCAATTCAAGAGCATCTATCCGGGGACGCATGTTTCACAGTGGCCTTCACTCCAAGAGTTGAATGTGGATAAATGTGGTGAAGTAGAGATTATAGCCGGGGAACTTTCAGTCTATCAAGAAAAACAAGAGTCTCCCTCTCACTCTAATCCAATCGGAAAACCTCTCATTTTAGTTGAGAAGGTTGTGTTTTCCAGTTTAACAACCTTGAATGTGGCTGGATGTCATGGTGTAAAATTCTTGTTCTCGCCTTCAATGGCCAGAAGTCTAGTTCAACTCAGAACTGTCACCATAAGTCGATGTAGAAGCATGGTGGTGATAGTATCCACACAAGAAGACGACGAAGAAAATAATATAGTTAACATGTTCTCTAAACTAGAATCTCTGACATTAAGAGAGCTTCCAAGCTTGGTTGGATTCTGCTCAGGAAGTTATGTTAGATTTTCATCATTAGAGGAGGCACTCATATCTAATGGTCAGAGTAAAAGTACTACAATCACGAAAGAAATTGAAGATGGAGACTCGAAGGATCACCTAGGAGTTGACAATGCTGTACGTTACTTTCTTTTTGATGAAAAGGTAACATTTCCTAGCTTGGAGAGATTACGGCTCGAAGAGCTACCTAAGTTGGAGGCAGTATGGCATAACCAACTTGCTCCAGACTCTTTTTGCAGGATTATAAAAGTTAGAGTTGACAGTTGCCCCAGTTTAATAAAACTCTTTGTGCCTTGTATCATGGAAAGATTAGATGCTCTAAAAACCTTGAGGGTGTGGTCCTGCCCGTTACTAGAAGTGGTATTCAAATGTGGAAGACTAAAATTTAAAGAGACACATGACCCATCAACCAAAGAGTTGAAAACTTTCAACTGCTGTCCCAATCTAGAAAAATTTAGCATACAACGCTCTGACGGATTGAAATACATTTTTCAGAAGGAAGAGAGGCTGGAAACAGTGCCAAAGTTTGTGTTCCCAAAAGTAACAAAATTGTTGCTTTTGAACCTGCCCCAATTCAAGAGCATCTATCCGGGGACGCATGTTTCACAGTGGCCTTCACTCCAAGAGCTGAATGTGGAAGAATGTAGTGAAGTAGAGATTATAGCCGGGGAACTTTCAGTCTATCAAGAAAAACAAGAGTCTCCCTCTCACTCTAATCCAATCGGACAACCTCTCATTTTAGTTGAGAAGGTTGTGTTTTCCAGTTTAACAACCTTGAATGTGGCTGGATGTCATGGTGTAAAATTCTTGTTCTCGCCTTCAATGGCCAGAAGTCTAGTTCAACTCAGAACTGTCACCATAAGTCGATGTAGAAGCATGGTGGTGATAGTATCCACACAAGAAGACGACGAAGAAAATAATATAGTTAACATGTTCTCTAAACTAGAATCTCTGACATTAAGAGAGCTTCCAAGCTTGGTTGGATTCTGCTCAGGAAGTTATGTTAGATTTTCATCATTAGAGGAGGCACTCATATCTAATGGTCAGAGTAAAAGTACTACAATCACGAAAGAAATTGAAGATGGAGACTCGAAGGATCACCTAGGAGTTGACAATGCTGTACGTTACTTTCTTTTTGATGAAAAGGTAACATTTCCTAGCTTGGAGAGATTACGGCTCGAAGAGCTACCTAAGTTGGAGGCAGTATGGCATAACCAACTTGCTCCAGACTCTTTTTGCAGGATTATAAAAGTTAGAGTTGACAGTTGCCCCAGTTTAATAAAACTCTTTGTGCCTTGTATCATGGAAAGATTAGATGCTCTAAAAACCTTGAGGGTGTGGTCCTGCCCGTTACTAGAAGTGGTATTCAAATGTGGAAGACTAAAATTTAAAGAGACACATGACCCATCAACCAAAGAGTTGAAAACTTTCAACTGCTGTCCCAATCTAGAAAAATTTAGCATACAACGCTCTGACGGATTGAAATACATTTTTCAGAAGGAAGAGAGGCTGGAAACAGTGCCAAAGTTTGTGTTCCCAAAAGTAACAAAATTGTTGCTTTTGAACCTGCCCCAATTCAAGAGCATCTATCCGGGGACGCATGTTTCACAGTGGCCTTCACTCCAAGAGCTGAATGTGGAAGAATGTGGTGAAGTAGAGATTATAGCCGGGGAACTTTCAGTCTATCAAGAAAAACAAGAGTCTCCCTCTCACTCTAATCCAATCGGACAACCTCTCATTTTAGTTGAGAAGGTTGTGTTTTCCAGTTTAACAACCTTGAATGTGGCTGGATGTCATGGTGTAAAATTCTTATTCTCGCCTTCAATGGCCAGAAGTCTAGTTCAACTCAGAACTGTCACCATAAGTCGATGTAGAAGCATGGTGGTGATAGTATCCACACAAGAAGACGACGAAGAAAATAATATAGTTAACATGTTCTCTAAACTAGAATCTCTGACATTAAGAGAGCTTCCAAGCTTGGTTGGATTCTGCTCAGGAAGTTATGCTGGATTTTCATCATTAGAGGAGACACTCATATCTAATGGTCAGAGTAAAAGTACTACAATCACGAAAGAAATTGAAGATGGAGACTCGAAGGATCACCTAGGTGTTGATAATGCTGTACGTTACTTTCTTTTTGATGAAAAGGTAACATTTCCTAGCTTGGAGAGATTATGGCTCGACGAGCTTCCTAAGTTAGAGGCAGTATGGCAAAACCAACTTGCTCCAGACTCTTTTTGCAGGATTAGAGAAGTTATAGTTGACAGTTGCCCCAGTTTAATAAATCTCTGTGTGCCTTTTATCACGGAAAGATTAGATGCTCTAAAAACCTTGATGGTGTGGTCCTGCCCGTCACTAGAAGTGGTATTCAAATGCGGAGCACTAAAATTTAAAGAAACACATGACCCATCAACCAAAGAGTTGAAAACTTTCAACTGCTGTCCCAATCTAGAATATTTTAGCATAGAACGCTCTGACGGATTGAAATACATTTTTCAGAAGGAAGAGAGGCTGGAAACAGTGCCAAAGTTTGTGTTCCCAAAAGTAACAAAATTGTTGCTTTGCAACCTGCCCCAATTCAAGAGCATCTATCCAGGGACGCATGTTTCACAGTGGCCTTCACTCCAAGAGCTGAATGTGGAAGAATGTGGTGAAGTAAAGATTATAGCCGGGGAATTTTCTGTTTATCAAGAAAAACAAGAGTCTGCCTCTCACTCTAATCCAATCGAACAACCTCTCATTTTAATTGAGAAGGGTTCATCACTCTTTCCCAGCTTGGAAACTTTGACCTTGGGGGCCATAGAGATGTGGAGTGGTCCACCCCCAGCGCAGTTCTGTAGCAAAGTGAAATTGGTTGTAGTTCGTGGCGCAACCTTCTCCAAGCACGCTACTTTCCTTCAGAGATTACACAATCTTGAAAAAATTATTGTGGAGGACATGGGAGACACGGATCCTTGCAGAGAAACATTTGTGGATGCAGGAAATAGTGGAGGGGAAATTCAAGTAAGAAAATTGACGATCAGATTTATGGACAAACTTATGCAAATCGGGAAGGTGAGCTCTCAATCAGCAGTTCCAGTTTTCCCAAAATTGGAGAAACTCCGGGTTTGGTGGTGTTCCAGATTAAAGAATCTAGATTCATCCACAATATCCTTCCAGAATCTGACATCGTTGACTACGGATGAAGAAGCTGTTGATATTTCCGAGGAAGCAATCAAGCAAAAAGAAGAAGATAAAGTGCTTTTGAAGATAGAAGACAGCTCCAAGAATGAAAAGCCGAAATCTTCTTCTCAACCTGAACATCATCATCATGATGCACCTGAGGATGGAGAAGGAGACAATCACGAGTTCGTTAAGGTCCTCACTACCTCGATTGCCATTTTGATCAGCTGCGTCGTTGTTTTTGTGTGGCGGGGATCGAGTGCTCAGAAGCCCAGGGTTGTCCAGCCTCTTAAGCTGTTGATCATCACGGCGCCTGAGCCGGAGCTTGACGATGGAAATAAGAAGATCACAATCTTCTTCGGCACGCAAACCGGTACTGCTGAGGGATTTGCCAAGGCTTTGGCTGAAGATGCAAAAGCTCGCTACGATAAGGTCACATTCAAAGTTGTTGATTTGGATGACTATGCAGCTGATGACGAGGCGTATGAGGAGAAATTGAAAAATGAGAGTTTGGCAATTTTCTTTATGGCGACATATGGTGATGGTGAGCTGACGGATAATGCTGCTAGATTTTACAAGTGGTTTACAGAGGATAAAGAGAAAGAAGCATGGCTTCAAAATATTCAATGCGGAGTATTTGGTCATGGGAACAGGCAGTATGAACATTTCAATAAGGTGGCCGTGGTTGTGGATGAGATCCTCGCTGTTCAAGGTTGGAGCTGTTGTTGGATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

2494

Amino Acids

281.94

Weight (kDa)

5.51

Isoelectric Point (pI)

40.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 162 - 319 7.5e-29 NB-ARC domain
AAA_22 PF13401 178 - 262 1.4e-06 AAA domain
LRR_14 PF23598 516 - 790 4.6e-08 Leucine-rich repeat region
LRR_RPS2 PF23247 761 - 869 8e-12 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 912 - 977 6.1e-11 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1110 - 1208 3.6e-10 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1246 - 1311 6.3e-11 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1444 - 1541 3.9e-10 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1580 - 1645 6.3e-11 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1778 - 1867 3.5e-10 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1914 - 1979 2.1e-08 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 2131 - 2255 7.4e-06 Plant disease resistance protein RPS2-like, leucine-rich repeats
Flavodoxin_1 PF00258 2368 - 2488 8.2e-23 Flavodoxin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 593, 2831, 3833, 4835
Acc36I ACCTGC 4 cut(s) 3159, 4161, 5163, 6165
AccB1I GGYRCC 1 cut(s) 7060
AccB7I CCANNNNNTGG 1 cut(s) 2045
AccI GTMKAC 1 cut(s) 1837
AciI CCGC 8 cut(s) 411, 728, 912, 1461, 1500, 5964, 7000, 7380
AclI AACGTT 1 cut(s) 1109
AcoI YGGCCR 6 cut(s) 1481, 2409, 3411, 4413, 5415, 7428
AcuI CTGAAG 7 cut(s) 441, 1172, 1563, 1688, 2018, 6470, 7176
AcyI GRCGYC 2 cut(s) 1099, 7061
AfiI CCNNNNNNNGG 4 cut(s) 144, 2045, 6679, 6914
AflII CTTAAG 2 cut(s) 128, 7040
AflIII ACRYGT 4 cut(s) 2514, 3516, 4518, 5520
AgeI ACCGGT 1 cut(s) 7121
AjiI CACGTC 1 cut(s) 826
AjnI CCWGG 4 cut(s) 372, 2044, 6181, 7022
AjuI GAANNNNNNNTTGG 2 cut(s) 2235, 2267
AleI CACNNNNGTG 3 cut(s) 422, 2688, 5694
Alw21I GWGCWC 3 cut(s) 5971, 6650, 7015
AlwNI CAGNNNCTG 1 cut(s) 6751
Ama87I CYCGRG 1 cut(s) 1076
ApeKI GCWGC 4 cut(s) 134, 6978, 7217, 7313
AseI ATTAAT 1 cut(s) 2325
AsiGI ACCGGT 1 cut(s) 7121
Asp700I GAANNNNTTC 8 cut(s) 360, 660, 1110, 1185, 3011, 4013, 5015, 6017
AspA2I CCTAGG 4 cut(s) 2686, 3688, 4690, 5692
AspLEI GCGC 3 cut(s) 6418, 6458, 7063
AspS9I GGNCC 9 cut(s) 50, 2173, 2925, 3927, 4929, 5931, 6384, 6404, 6946
AsuC2I CCSGG 8 cut(s) 3177, 3253, 4179, 4255, 5181, 5257, 6259, 6692
AsuII TTCGAA 1 cut(s) 2330
AvaI CYCGRG 1 cut(s) 1076
AvaII GGWCC 7 cut(s) 2173, 2925, 3927, 4929, 5931, 6404, 6946
AvrII CCTAGG 4 cut(s) 2686, 3688, 4690, 5692
AxyI CCTNAGG 1 cut(s) 6909
BalI TGGCCA 5 cut(s) 1483, 2411, 3413, 4415, 5417
BamHI GGATCC 1 cut(s) 6538
BanI GGYRCC 1 cut(s) 7060
BanII GRGCYC 1 cut(s) 6650
BauI CACGAG 2 cut(s) 114, 6932
Bbv12I GWGCWC 3 cut(s) 5971, 6650, 7015
BbvCI CCTCAGC 1 cut(s) 7131
BbvI GCAGC 4 cut(s) 121, 6965, 7229, 7300
BceAI ACGGC 5 cut(s) 2774, 3776, 4778, 7074, 7415
BciT130I CCWGG 4 cut(s) 374, 2046, 6183, 7024
BciVI GTATCC 5 cut(s) 1781, 2485, 3487, 4489, 5491
BclI TGATCA 2 cut(s) 6972, 7050
BcnI CCSGG 8 cut(s) 3177, 3253, 4179, 4255, 5181, 5257, 6259, 6692
BfmI CTRYAG 4 cut(s) 107, 990, 1746, 6424
BfoI RGCGCY 1 cut(s) 7064
BfrI CTTAAG 2 cut(s) 128, 7040
BfuAI ACCTGC 4 cut(s) 3159, 4161, 5163, 6165
BfuI GTATCC 5 cut(s) 1781, 2485, 3487, 4489, 5491
BglII AGATCT 1 cut(s) 1506
BisI GCNGC 5 cut(s) 135, 912, 6979, 7218, 7314
BlnI CCTAGG 4 cut(s) 2686, 3688, 4690, 5692
BlpI GCTNAGC 1 cut(s) 329
BlsI GCNGC 5 cut(s) 136, 913, 6980, 7219, 7315
BmcAI AGTACT 4 cut(s) 2641, 3643, 4645, 5647
Bme18I GGWCC 7 cut(s) 2173, 2925, 3927, 4929, 5931, 6404, 6946
BmeT110I CYCGRG 1 cut(s) 1076
BmgBI CACGTC 1 cut(s) 826
BmgT120I GGNCC 9 cut(s) 50, 2173, 2925, 3927, 4929, 5931, 6384, 6404, 6946
BmiI GGNNCC 3 cut(s) 6385, 6540, 7062
BmrI ACTGGG 5 cut(s) 390, 2850, 3852, 4854, 5856
BmuI ACTGGG 5 cut(s) 390, 2850, 3852, 4854, 5856
BoxI GACNNNNGTC 1 cut(s) 2178
BplI GAGNNNNNCTC 8 cut(s) 3275, 3307, 4277, 4309, 5279, 5311, 6281, 6313
BpmI CTGGAG 6 cut(s) 1230, 2132, 2793, 3795, 4797, 5799
Bpu10I CCTNAGC 8 cut(s) 1416, 1760, 2575, 3577, 4579, 5581, 7065, 7131
Bpu1102I GCTNAGC 1 cut(s) 329
Bpu14I TTCGAA 1 cut(s) 2330
BpuEI CTTGAG 4 cut(s) 1942, 2935, 3937, 4939
BpuMI CCSGG 8 cut(s) 3177, 3253, 4179, 4255, 5181, 5257, 6259, 6692
Bsa29I ATCGAT 1 cut(s) 1723
BsaBI GATNNNNATC 6 cut(s) 1511, 2596, 3598, 4600, 5602, 7100
BsaHI GRCGYC 2 cut(s) 1099, 7061
BsaWI WCCGGW 1 cut(s) 7121
BsaXI ACNNNNNCTCC 5 cut(s) 2054, 2084, 2220, 2250, 7459
Bsc4I CCNNNNNNNGG 4 cut(s) 144, 2045, 6679, 6914
Bse118I RCCGGY 1 cut(s) 7121
Bse21I CCTNAGG 1 cut(s) 6909
Bse3DI GCAATG 3 cut(s) 82, 729, 1316
Bse8I GATNNNNATC 6 cut(s) 1511, 2596, 3598, 4600, 5602, 7100
BseBI CCWGG 4 cut(s) 374, 2046, 6183, 7024
BseCI ATCGAT 1 cut(s) 1723
BseJI GATNNNNATC 6 cut(s) 1511, 2596, 3598, 4600, 5602, 7100
BseLI CCNNNNNNNGG 4 cut(s) 144, 2045, 6679, 6914
BseMI GCAATG 3 cut(s) 82, 729, 1316
BseRI GAGGAG 5 cut(s) 2621, 3623, 4625, 5627, 7253
BseXI GCAGC 4 cut(s) 121, 6965, 7229, 7300
BseYI CCCAGC 3 cut(s) 955, 6359, 6412
Bsh1285I CGRYCG 1 cut(s) 415
BshNI GGYRCC 1 cut(s) 7060
BshTI ACCGGT 1 cut(s) 7121
BshVI ATCGAT 1 cut(s) 1723
BsiEI CGRYCG 1 cut(s) 415
BsiHKAI GWGCWC 3 cut(s) 5971, 6650, 7015
BsiHKCI CYCGRG 1 cut(s) 1076
BslI CCNNNNNNNGG 4 cut(s) 144, 2045, 6679, 6914
BsmBI CGTCTC 1 cut(s) 1090
BsmI GAATGC 3 cut(s) 1139, 1395, 1559
BsoBI CYCGRG 1 cut(s) 1076
Bsp119I TTCGAA 1 cut(s) 2330
Bsp1286I GDGCHC 3 cut(s) 5971, 6650, 7015
Bsp1720I GCTNAGC 1 cut(s) 329
BspACI CCGC 8 cut(s) 411, 728, 912, 1461, 1500, 5964, 7000, 7380
BspDI ATCGAT 1 cut(s) 1723
BspHI TCATGA 1 cut(s) 6898
BspLI GGNNCC 3 cut(s) 6385, 6540, 7062
BspMI ACCTGC 4 cut(s) 3159, 4161, 5163, 6165
BspQI GCTCTTC 4 cut(s) 1176, 2760, 3762, 4764
BspT104I TTCGAA 1 cut(s) 2330
BspT107I GGYRCC 1 cut(s) 7060
BspTI CTTAAG 2 cut(s) 128, 7040
BsrDI GCAATG 3 cut(s) 82, 729, 1316
BsrFI RCCGGY 1 cut(s) 7121
BssAI RCCGGY 1 cut(s) 7121
BssNI GRCGYC 2 cut(s) 1099, 7061
BssSI CACGAG 2 cut(s) 114, 6932
BssT1I CCWWGG 8 cut(s) 2176, 2358, 2686, 3688, 4690, 5692, 6378, 7143
Bst2BI CACGAG 2 cut(s) 114, 6932
Bst2UI CCWGG 4 cut(s) 374, 2046, 6183, 7024
Bst6I CTCTTC 8 cut(s) 222, 1176, 2760, 3762, 4083, 4764, 5085, 6087
BstACI GRCGYC 2 cut(s) 1099, 7061
BstAFI CTTAAG 2 cut(s) 128, 7040
BstAPI GCANNNNNTGC 1 cut(s) 3051
BstBI TTCGAA 1 cut(s) 2330
BstC8I GCNNGC 6 cut(s) 909, 953, 1459, 6474, 7115, 7171
BstDSI CCRYGG 1 cut(s) 7431
BstH2I RGCGCY 1 cut(s) 7064
BstHHI GCGC 3 cut(s) 6418, 6458, 7063
BstMCI CGRYCG 1 cut(s) 415
BstNI CCWGG 4 cut(s) 374, 2046, 6183, 7024
BstNSI RCATGY 9 cut(s) 1461, 2518, 3188, 3520, 4190, 4522, 5192, 5524, 6194
BstPAI GACNNNNGTC 1 cut(s) 2178
BstSFI CTRYAG 4 cut(s) 107, 990, 1746, 6424
BstV1I GCAGC 4 cut(s) 121, 6965, 7229, 7300
BstX2I RGATCY 7 cut(s) 6, 124, 973, 1506, 2201, 6538, 7446
BstXI CCANNNNNNTGG 1 cut(s) 7150
BstYI RGATCY 7 cut(s) 6, 124, 973, 1506, 2201, 6538, 7446
Bsu15I ATCGAT 1 cut(s) 1723
Bsu36I CCTNAGG 1 cut(s) 6909
BsuI GTATCC 5 cut(s) 1781, 2485, 3487, 4489, 5491
BsuTUI ATCGAT 1 cut(s) 1723
BtgI CCRYGG 1 cut(s) 7431
BtrI CACGTC 1 cut(s) 826
BtsI GCAGTG 2 cut(s) 215, 1269
BveI ACCTGC 4 cut(s) 3159, 4161, 5163, 6165
Cac8I GCNNGC 6 cut(s) 909, 953, 1459, 6474, 7115, 7171
CaiI CAGNNNCTG 1 cut(s) 6751
CciI TCATGA 1 cut(s) 6898
CfoI GCGC 3 cut(s) 6418, 6458, 7063
Cfr10I RCCGGY 1 cut(s) 7121
Cfr13I GGNCC 9 cut(s) 50, 2173, 2925, 3927, 4929, 5931, 6384, 6404, 6946
ClaI ATCGAT 1 cut(s) 1723
CseI GACGC 6 cut(s) 1107, 3190, 4192, 5194, 6196, 6970
CspAI ACCGGT 1 cut(s) 7121
CspCI CAANNNNNGTGG 4 cut(s) 333, 368, 997, 1032
DinI GGCGCC 1 cut(s) 7062
DraI TTTAAA 5 cut(s) 804, 2974, 3976, 4978, 5980
EaeI YGGCCR 6 cut(s) 1481, 2409, 3411, 4413, 5415, 7428
Eam1104I CTCTTC 8 cut(s) 222, 1176, 2760, 3762, 4083, 4764, 5085, 6087
EarI CTCTTC 8 cut(s) 222, 1176, 2760, 3762, 4083, 4764, 5085, 6087
Ecl136II GAGCTC 1 cut(s) 6648
Eco130I CCWWGG 8 cut(s) 2176, 2358, 2686, 3688, 4690, 5692, 6378, 7143
Eco24I GRGCYC 1 cut(s) 6650
Eco32I GATATC 1 cut(s) 517
Eco47I GGWCC 7 cut(s) 2173, 2925, 3927, 4929, 5931, 6404, 6946
Eco53kI GAGCTC 1 cut(s) 6648
Eco57I CTGAAG 7 cut(s) 441, 1172, 1563, 1688, 2018, 6470, 7176
Eco81I CCTNAGG 1 cut(s) 6909
Eco88I CYCGRG 1 cut(s) 1076
EcoICRI GAGCTC 1 cut(s) 6648
EcoO109I RGGNCCY 1 cut(s) 6946
EcoRI GAATTC 2 cut(s) 368, 660
EcoRII CCWGG 4 cut(s) 372, 2044, 6181, 7022
EcoRV GATATC 1 cut(s) 517
EcoT14I CCWWGG 8 cut(s) 2176, 2358, 2686, 3688, 4690, 5692, 6378, 7143
EcoT22I ATGCAT 3 cut(s) 294, 1395, 2102
EcoT38I GRGCYC 1 cut(s) 6650
EgeI GGCGCC 1 cut(s) 7062
EheI GGCGCC 1 cut(s) 7062
ErhI CCWWGG 8 cut(s) 2176, 2358, 2686, 3688, 4690, 5692, 6378, 7143
Esp3I CGTCTC 1 cut(s) 1090
FalI AAGNNNNNCTT 2 cut(s) 7347, 7379
FauI CCCGC 2 cut(s) 721, 6993
FauNDI CATATG 2 cut(s) 406, 7285
FbaI TGATCA 2 cut(s) 6972, 7050
FblI GTMKAC 1 cut(s) 1837
Fnu4HI GCNGC 5 cut(s) 135, 912, 6979, 7218, 7314
FriOI GRGCYC 1 cut(s) 6650
Fsp4HI GCNGC 5 cut(s) 135, 912, 6979, 7218, 7314
GlaI GCGC 3 cut(s) 6417, 6457, 7062
GluI GCNGC 5 cut(s) 135, 912, 6979, 7218, 7314
GsaI CCCAGC 3 cut(s) 959, 6363, 6416
GsuI CTGGAG 6 cut(s) 1230, 2132, 2793, 3795, 4797, 5799
HaeII RGCGCY 1 cut(s) 7064
HgaI GACGC 6 cut(s) 1107, 3190, 4192, 5194, 6196, 6970
HhaI GCGC 3 cut(s) 6418, 6458, 7063
Hin1I GRCGYC 2 cut(s) 1099, 7061
Hin6I GCGC 3 cut(s) 6416, 6456, 7061
HinP1I GCGC 3 cut(s) 6416, 6456, 7061
HindIII AAGCTT 4 cut(s) 2557, 3559, 4561, 5563
HpaI GTTAAC 5 cut(s) 1291, 2512, 3514, 4516, 5518
Hpy99I CGWCG 8 cut(s) 827, 2168, 2495, 3497, 4499, 5501, 5774, 6986
HpyCH4IV ACGT 6 cut(s) 825, 1109, 2707, 3709, 4711, 5713
HpySE526I ACGT 6 cut(s) 825, 1109, 2707, 3709, 4711, 5713
Hsp92I GRCGYC 2 cut(s) 1099, 7061
HspAI GCGC 3 cut(s) 6416, 6456, 7061
KasI GGCGCC 1 cut(s) 7060
Ksp22I TGATCA 2 cut(s) 6972, 7050
KspAI GTTAAC 5 cut(s) 1291, 2512, 3514, 4516, 5518
LguI GCTCTTC 4 cut(s) 1176, 2760, 3762, 4764
Lsp1109I GCAGC 4 cut(s) 121, 6965, 7229, 7300
MaeII ACGT 6 cut(s) 825, 1109, 2707, 3709, 4711, 5713
MfeI CAATTG 2 cut(s) 18, 1044
MflI RGATCY 7 cut(s) 6, 124, 973, 1506, 2201, 6538, 7446
MhlI GDGCHC 3 cut(s) 5971, 6650, 7015
MlsI TGGCCA 5 cut(s) 1483, 2411, 3413, 4415, 5417
MluNI TGGCCA 5 cut(s) 1483, 2411, 3413, 4415, 5417
Mly113I GGCGCC 1 cut(s) 7061
Mox20I TGGCCA 5 cut(s) 1483, 2411, 3413, 4415, 5417
Mph1103I ATGCAT 3 cut(s) 294, 1395, 2102
MroXI GAANNNNTTC 8 cut(s) 360, 660, 1110, 1185, 3011, 4013, 5015, 6017
MscI TGGCCA 5 cut(s) 1483, 2411, 3413, 4415, 5417
Msp20I TGGCCA 5 cut(s) 1483, 2411, 3413, 4415, 5417
MspA1I CMGCKG 2 cut(s) 6978, 7220
MspCI CTTAAG 2 cut(s) 128, 7040
MunI CAATTG 2 cut(s) 18, 1044
Mva1269I GAATGC 3 cut(s) 1139, 1395, 1559
MvaI CCWGG 4 cut(s) 374, 2046, 6183, 7024
NarI GGCGCC 1 cut(s) 7061
NciI CCSGG 8 cut(s) 3177, 3253, 4179, 4255, 5181, 5257, 6259, 6692
NdeI CATATG 2 cut(s) 406, 7285
NlaIV GGNNCC 3 cut(s) 6385, 6540, 7062
NmuCI GTSAC 8 cut(s) 1039, 1373, 2365, 3439, 4441, 5443, 5940, 7183
NsiI ATGCAT 3 cut(s) 294, 1395, 2102
NspI RCATGY 9 cut(s) 1461, 2518, 3188, 3520, 4190, 4522, 5192, 5524, 6194
NspV TTCGAA 1 cut(s) 2330
OliI CACNNNNGTG 3 cut(s) 422, 2688, 5694
PaeI GCATGC 1 cut(s) 1461
PagI TCATGA 1 cut(s) 6898
PasI CCCWGGG 1 cut(s) 7023
PciI ACATGT 4 cut(s) 2514, 3516, 4518, 5520
PciSI GCTCTTC 4 cut(s) 1176, 2760, 3762, 4764
PctI GAATGC 3 cut(s) 1139, 1395, 1559
PdmI GAANNNNTTC 8 cut(s) 360, 660, 1110, 1185, 3011, 4013, 5015, 6017
PflMI CCANNNNNTGG 1 cut(s) 2045
PinAI ACCGGT 1 cut(s) 7121
PkrI GCNGC 5 cut(s) 136, 913, 6980, 7219, 7315
PluTI GGCGCC 1 cut(s) 7064
PpuMI RGGWCCY 1 cut(s) 6946
PscI ACATGT 4 cut(s) 2514, 3516, 4518, 5520
PshAI GACNNNNGTC 1 cut(s) 2178
PshBI ATTAAT 1 cut(s) 2325
PsiI TTATAA 4 cut(s) 593, 2831, 3833, 4835
Psp124BI GAGCTC 1 cut(s) 6650
Psp1406I AACGTT 1 cut(s) 1109
Psp5II RGGWCCY 1 cut(s) 6946
Psp6I CCWGG 4 cut(s) 372, 2044, 6181, 7022
PspFI CCCAGC 3 cut(s) 955, 6359, 6412
PspGI CCWGG 4 cut(s) 372, 2044, 6181, 7022
PspN4I GGNNCC 3 cut(s) 6385, 6540, 7062
PspPI GGNCC 9 cut(s) 50, 2173, 2925, 3927, 4929, 5931, 6384, 6404, 6946
PspPPI RGGWCCY 1 cut(s) 6946
PstNI CAGNNNCTG 1 cut(s) 6751
PsuI RGATCY 7 cut(s) 6, 124, 973, 1506, 2201, 6538, 7446
PvuII CAGCTG 2 cut(s) 6978, 7220
SacI GAGCTC 1 cut(s) 6650
SapI GCTCTTC 4 cut(s) 1176, 2760, 3762, 4764
SatI GCNGC 5 cut(s) 135, 912, 6979, 7218, 7314
Sau96I GGNCC 9 cut(s) 50, 2173, 2925, 3927, 4929, 5931, 6384, 6404, 6946
ScaI AGTACT 4 cut(s) 2641, 3643, 4645, 5647
SduI GDGCHC 3 cut(s) 5971, 6650, 7015
SfcI CTRYAG 4 cut(s) 107, 990, 1746, 6424
SfoI GGCGCC 1 cut(s) 7062
SfuI TTCGAA 1 cut(s) 2330
SinI GGWCC 7 cut(s) 2173, 2925, 3927, 4929, 5931, 6404, 6946
SmlI CTYRAG 6 cut(s) 128, 1921, 2914, 3916, 4918, 7040
SmoI CTYRAG 6 cut(s) 128, 1921, 2914, 3916, 4918, 7040
SphI GCATGC 1 cut(s) 1461
SsiI CCGC 8 cut(s) 411, 728, 912, 1461, 1500, 5964, 7000, 7380
SspDI GGCGCC 1 cut(s) 7060
SspI AATATT 5 cut(s) 843, 2035, 2210, 6044, 7372
SstI GAGCTC 1 cut(s) 6650
StyI CCWWGG 8 cut(s) 2176, 2358, 2686, 3688, 4690, 5692, 6378, 7143
TaiI ACGT 6 cut(s) 828, 1112, 2710, 3712, 4714, 5716
TatI WGTACW 4 cut(s) 2639, 3641, 4643, 5645
TauI GCSGC 1 cut(s) 914
TseFI GTSAC 8 cut(s) 1039, 1373, 2365, 3439, 4441, 5443, 5940, 7183
TseI GCWGC 4 cut(s) 134, 6978, 7217, 7313
Tsp45I GTSAC 8 cut(s) 1039, 1373, 2365, 3439, 4441, 5443, 5940, 7183
TspGWI ACGGA 9 cut(s) 501, 3075, 4077, 5079, 5909, 6081, 6551, 6782, 7319
Van91I CCANNNNNTGG 1 cut(s) 2045
Vha464I CTTAAG 2 cut(s) 128, 7040
VpaK11BI GGWCC 7 cut(s) 2173, 2925, 3927, 4929, 5931, 6404, 6946
VspI ATTAAT 1 cut(s) 2325
XbaI TCTAGA 8 cut(s) 713, 854, 1150, 3031, 4033, 5035, 6037, 6721
XceI RCATGY 9 cut(s) 1461, 2518, 3188, 3520, 4190, 4522, 5192, 5524, 6194
XcmI CCANNNNNNNNNTGG 2 cut(s) 2099, 2156
XmaJI CCTAGG 4 cut(s) 2686, 3688, 4690, 5692
XmiI GTMKAC 1 cut(s) 1837
XmnI GAANNNNTTC 8 cut(s) 360, 660, 1110, 1185, 3011, 4013, 5015, 6017
ZrmI AGTACT 4 cut(s) 2641, 3643, 4645, 5647
Zsp2I ATGCAT 3 cut(s) 294, 1395, 2102
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.