Rh5AG125200

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
Physical Location & Seq
Forward (+)
11801565 .. 11817286
15722 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG125200.1

Sequence Viewer

Length: 4098 bp
ATGGAGCTTCTTTCAAAGATTGTGGAGTACCCGATTGAACTTGTTGGACGTCTACTGGGACGCCATGTGGGTTATGTAATTCACTGCAGAACCAACATTCAAAAGCTACAGGATCAAGTGAAAGAATTGAAAGCTGCCAGAGAGACGATAAAGTATAAGGTTGCTGAAGCTGAAACAAAAGGTGAAAAAATACGACATGATGTCGAGTTGTGGCTGACAACAGTGGACGAGATCACTGCAAAGACGGACGAATTGTTGAATGACGAAAGCCAAGCAAAGCTGAAATGTCTCCATGGCTTTTGTCCTAATCTGACTGTCCGTCATCAGATAAGCAGGAAATCAACAAAATTGGTTGAGGAGGTTGTTGAACAGTATGGAAAAAAAGAATTTTCCCAAGTTTCGTGTGGTAATTTACGGAAGGAGGTATGGGATGTAACTACCGGAGATTACCAGGCCTTTGAATCAAGGATGTTAATTGTGAAGGACATCATGGATAGTCTGAAAGTCTCTGATATTCAGAGGATTGGGGTGTGTGGAATTGGAGGTGTGGGTAAAACCACATTGGTCAAACAAGTTTACAGGCACGCTTCAGAAGATAAACAGTTATTTGATAATGTGGTTATGCTATTAGATGTGAAAAGTAATCCAGACCTGGAATTAATTCAAAAGAAAATTGTTGAGAAGCTGGGTATGGACATTCTTGATAATGAAACGATAGACGGAAGAGCGAGCCGTCTATGTGCCAGGATACAAGGAAAAAACGTTCTTGTGATTTTGGATGATGTTCAAGAAAAAATGGATTTGGAGGTTGTGGGACTTCCTCGTCTGCCAACTTGTAAAATTTTGTTGACATCCAGAACTCGAGATGTTTTATCTTTTGATAAGATGCAGGCGGACAAAGTCTTTCAGCTTGATCTTTTAGGTAAAGAAGAAACTTGGAGTTTGTTTGAGAAGATGGCAGGCGACGTTGTTAAACACAATGGTCGTATACGAAATTTAGCAATCCAAGTAGCTGAAAGATGTGGAGGTTTGCCCTTATTAGTCGTCACAGTTGCAAGTGCGTTGAAAGAGAAAAAGAAATTACACTCATGGAAAGATGCCTTAAGACAACTTAAAGGGTTTGACAAAGAAGAGTCGACAGAAAAAGCAAACCTGGCGCTAGAGTGGAGTTATGACCAACTGGATAATACAGAGCTTCAGCCGTTGTTCTTGCTTTGCGGAATTATAGTAAGGCAGAACCAGATTTCTGTGGCAGACCTGTTAAAATGTGGTATGGGTTTAGGTTTGTTTACCAACGTCAATACAGTGGAAGGAGCACAGGATAAATTGGAAACACTGCTTGATAAACTTAAAGATTTTTGCTTATTGTTGGACAGTGAAATTGAAGGCAATGTAAGAATGCATGATCTTGTGTGTCATGTTGCGAACCGGATTTCACACAGAGATCAACATCTGTTATCAGTAGAATATGGAGGTGACTTGAAAGAATGGCCAAATAAAGATTCCTTAAGAAAGTGCACCAAGTTCTCTCTCATACTCCGCAATATTCACACATTTCCTGAACTACCTTTGGAGTGCCCAGAAGTAGAATTGTTTCTTTTGGAGGGTGAAAATGATGAGTCGGTGCAAATCCCATCCAACTTATTTATAGAGATGGAGAAACTCAAAGTGCTGGATTTAACCGGAATGTGTATGCCATTATTGCCCTTATCTATGCAATACTTGAAGAAGCTTCAAACGTTGTGTTTAGATGGATGCGTGTTGGGAGATATAACTCTACTTGGGCAGCTAAGTAGCTTGCAAATTCTTAGCTTGTTAAGATCCAATCTTAAAAAATTGCCTAAAGAAATAGGGCAATTGACTTGTCTTCGATTGTTGGATTTATCCAATTGCACTGAACTTGAAGAGATTTCACCTACTGTTATATCAAGTTTGGTGAGTCTGGAAGATTTGAGAATGAGAAACAGCTTTAACAAATGGGAGGTTGAAGGTGAAGGAAGTAATGCAAGCCTTTCAGAGCTACAGCATTTGTGTCGGCTATCCGCATTAGAAATACATATTCCGAATGTTGACGCTCTTCCAACAAACTTGTTCTCCCACAAATTAGAAAGATTCAATATTTTTATTGGGAATGCATGGGTTCGGAGCTGGTCATGGGAGAGAGTTATGACTGCGACGACCCGCAATACCTTGAGAGTCAAGCTTACTAAAGAATTAGATGAAGGTATAAAATTGTTGGTAAAGAGATCTGAAGACTTGTTCTTAGATGAGACGCATGTTGTTATTGTCCATCGGTTGAATACCGAAGATTTGGAGAATGTGAAGCATCTCCACCTCCAAAACAATATTGATTCTACAGACATCTTCAATAGAACGGTATCCGCCTGTAAACTCCTGCAAGAGATTGTATCATCAACAAGAGAAGGCGATGAAGACAATATTGATGGCATGTTTCCTAAACTTGAAGTTTTGAAGCTTAAAGCACTTTCAAACCTGGCTAGATTCAGCACAGGAAATTATATTCAGTTTCCGTCATTGGAAGAATTGGAGGTATATGATTGTGATAATCTAGGGGTATTCATTGGTGATAAAGTTTCTATGAGTAGTGAGGACACTAGAAGATGCAAAGAAGATGAACAGATGGTCTTGGAGGAGGAAGAGAACCTTGAAGTCAAGAGTGAGTCCTTTGTAAAATACTCCCTCTTTAATGAAAAGGTGGGATTTCCTATCTTGGAAAGACTGATCATCAAAGGGATAAGGGAGTTGAAGGCGATGTGGCACGTCCAACAATCTCAAAACTCTTTTTGGAGACTCAAGCAAGTTGAGGTTCGGGAATGTCACAATCTAATAAGTTTGTTTCCGCCTAGTGTCATGAGAAGATTGGATACGCTGGAAACCTTGACGATACGGAACTGCAAATCACTAGAAGTGGTATGTGAGGAAATTGTTGTTGCAGAAGAGGAACAAGAAGTTGTAGAAACAACACCTTCTCCATTTGTATTTCAAAAAGTAACATCCGTGGAGTTGAGGAATCTACCTCAACTTACGGGTTGCATAAATGCTTCACAGTGGCCATCACTCAAACGATTGGAGGTGGAGGGATGTGATAAAGTGGGAATTTTTGCCACAGAATTTTCTCACTTTAGAAAGAAATATGAGACGGAACCTCTAATGACGTCTCAAAAGCCTCTATTTCTAACCGACAAGGATTCGTTCCTCGACTTGGAACACTTACCATTGTTTGGCATGGAAATTTGGGATGGACCACCCCCAGCGGATCAGTTGGTGTTTGGCAAATTAAAATCAATCTGCTCTTATGGGAATTGTGCACCTTTCTCCAAGCAAGCTTCGGTCCTTTTCCTCCAGAGATTACAAAATCTTGAAGAAATTGAAATGGGAGACAACTCTTACGAAAGAATTAGTGGTTGCACTACTAGCGAAGAAATACATGATGATGCAGTTGGGAGTGGGACCCTCCCCCGTGTAAGGAGTTTGACGCTGTCCCGTATGGACCAACTGATGGATCTAGAGAACGACAACTCCCAATCACTACTTTTTCCAAATTTGGAAACCCTTCAGCTGTGGTTTTGTTTCAGATTAAAAAGTATAGAGTCATCCGCAATATCCTTCCGGAATCTTACAACTTTGAAAGTATTGTTGTGTGATGGATTTGAATATATAACAAGTTATTCAGTGGCTAAAAGCTTAGTGCAACTCAAAACATTGGAGGTGGACTCATGTCAAAGTGTTGTAGTGATAGTGGCAAGCAATGTGGGAGACGATGATGCTGATGATGCCCCTGGAAATGAGATTGTTTTCAGCCACTTGCAACATTTGAGTCTAGGTGGTCTACCAAGGCTACAAGGCTTTTCCTCCGAAAATTGCACAGTCAAATTCCCATCCTCCGTGACCTTATGGGTATATTTATGCCCGATTAAGTTGAAGATTTCCCCTGATGGGGTCCTCCTAAAAGTAATAGAGGATCAATGTGAGCAAAAAGGAGATGATGACATTGACAATGATGATGATCAACAGAAAAATGATGTTGAATCAGCTCGGAGGACTCCTAAAATATCATCAGAAGAGCCTGCTCTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1365

Amino Acids

154.89

Weight (kDa)

5.14

Isoelectric Point (pI)

43.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 160 - 321 1.3e-27 NB-ARC domain
LRR_14 PF23598 551 - 686 7.6e-09 Leucine-rich repeat region
LRR_14 PF23598 595 - 852 8.2e-09 Leucine-rich repeat region
LRR_RPS2 PF23247 906 - 973 3.6e-14 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 920 - 1037 1.3e-15 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1075 - 1203 1.3e-08 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1207 - 1288 1.2e-08 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 822
AatII GACGTC 2 cut(s) 52, 3179
AccB7I CCANNNNNTGG 2 cut(s) 3242, 3520
AccI GTMKAC 4 cut(s) 52, 988, 1136, 3850
AccIII TCCGGA 1 cut(s) 3630
AciI CCGC 9 cut(s) 893, 1218, 1540, 2043, 2182, 2382, 2861, 3275, 3618
AclI AACGTT 2 cut(s) 762, 1739
AclWI GGATC 5 cut(s) 120, 1815, 3285, 3531, 3990
AcoI YGGCCR 2 cut(s) 1490, 3071
AcsI RAATTY 9 cut(s) 386, 840, 994, 1803, 3117, 3131, 3252, 3562, 3893
AcuI CTGAAG 5 cut(s) 186, 573, 1181, 2271, 3560
AcyI GRCGYC 3 cut(s) 49, 61, 3176
AfaI GTAC 1 cut(s) 29
AfiI CCNNNNNNNGG 6 cut(s) 3223, 3242, 3486, 3520, 3957, 3958
AflII CTTAAG 2 cut(s) 1102, 1507
AhdI GACNNNNNGTC 2 cut(s) 200, 318
AjiI CACGTC 1 cut(s) 2782
AjnI CCWGG 6 cut(s) 450, 651, 743, 1152, 2493, 3799
AjuI GAANNNNNNNTTGG 2 cut(s) 1486, 1518
AloI GAACNNNNNNTCC 4 cut(s) 747, 779, 3524, 3556
Alw21I GWGCWC 3 cut(s) 1318, 1520, 3331
Alw26I GTCTC 9 cut(s) 137, 293, 511, 2264, 2803, 3152, 3183, 3393, 3771
Alw44I GTGCAC 2 cut(s) 1516, 3327
AlwI GGATC 5 cut(s) 120, 1815, 3285, 3531, 3990
Ama87I CYCGRG 1 cut(s) 861
Aor13HI TCCGGA 1 cut(s) 3630
AoxI GGCC 3 cut(s) 453, 1490, 3071
ApaLI GTGCAC 2 cut(s) 1516, 3327
ApeKI GCWGC 2 cut(s) 134, 1786
ApoI RAATTY 9 cut(s) 386, 840, 994, 1803, 3117, 3131, 3252, 3562, 3893
AseI ATTAAT 1 cut(s) 659
Asp700I GAANNNNTTC 3 cut(s) 660, 1593, 3573
AspLEI GCGC 1 cut(s) 1159
AspS9I GGNCC 5 cut(s) 3263, 3352, 3471, 3511, 3961
AsuHPI GGTGA 7 cut(s) 194, 1487, 1619, 1905, 1948, 2003, 2597
AvaI CYCGRG 1 cut(s) 861
AvaII GGWCC 5 cut(s) 3263, 3352, 3471, 3511, 3961
BaeGI GKGCMC 3 cut(s) 1520, 1580, 3331
BalI TGGCCA 2 cut(s) 1492, 3073
BarI GAAGNNNNNNTAC 2 cut(s) 2869, 2901
BbsI GAAGAC 3 cut(s) 1859, 2259, 2439
Bbv12I GWGCWC 3 cut(s) 1318, 1520, 3331
BbvI GCAGC 2 cut(s) 121, 1798
BceAI ACGGC 2 cut(s) 717, 1186
BcgI CGANNNNNNTGC 4 cut(s) 218, 252, 2015, 2049
BciT130I CCWGG 6 cut(s) 452, 653, 745, 1154, 2495, 3801
BciVI GTATCC 3 cut(s) 741, 2389, 2878
BclI TGATCA 2 cut(s) 2742, 4027
BcoDI GTCTC 9 cut(s) 137, 293, 511, 2264, 2803, 3152, 3183, 3393, 3771
BfmI CTRYAG 4 cut(s) 85, 107, 2021, 2355
BfoI RGCGCY 1 cut(s) 1160
BfrI CTTAAG 2 cut(s) 1102, 1507
BfuI GTATCC 3 cut(s) 741, 2389, 2878
BglII AGATCT 1 cut(s) 2246
BisI GCNGC 2 cut(s) 135, 1787
BlsI GCNGC 2 cut(s) 136, 1788
Bme1390I CCNGG 6 cut(s) 452, 653, 745, 1154, 2495, 3801
Bme18I GGWCC 5 cut(s) 3263, 3352, 3471, 3511, 3961
BmeRI GACNNNNNGTC 2 cut(s) 200, 318
BmeT110I CYCGRG 1 cut(s) 861
BmgBI CACGTC 1 cut(s) 2782
BmgT120I GGNCC 5 cut(s) 3263, 3352, 3471, 3511, 3961
BmiI GGNNCC 4 cut(s) 3165, 3472, 3473, 3962
BmrFI CCNGG 6 cut(s) 452, 653, 745, 1154, 2495, 3801
BmrI ACTGGG 1 cut(s) 65
BmsI GCATC 8 cut(s) 876, 1087, 1745, 2335, 2612, 3445, 3775, 3784
BmuI ACTGGG 1 cut(s) 65
BoxI GACNNNNGTC 1 cut(s) 3738
BpiI GAAGAC 3 cut(s) 1859, 2259, 2439
BplI GAGNNNNNCTC 2 cut(s) 3719, 3751
BpmI CTGGAG 1 cut(s) 3347
BpuEI CTTGAG 2 cut(s) 2212, 2798
BsaBI GATNNNNATC 2 cut(s) 1449, 4026
BsaHI GRCGYC 3 cut(s) 49, 61, 3176
BsaJI CCNNGG 4 cut(s) 292, 3018, 3799, 3854
BsaWI WCCGGW 4 cut(s) 440, 1428, 1682, 3630
BsaXI ACNNNNNCTCC 6 cut(s) 2078, 2108, 2974, 3004, 3524, 3554
Bsc4I CCNNNNNNNGG 6 cut(s) 3223, 3242, 3486, 3520, 3957, 3958
Bse1I ACTGG 2 cut(s) 60, 1185
Bse3DI GCAATG 2 cut(s) 1396, 3775
Bse8I GATNNNNATC 2 cut(s) 1449, 4026
BseAI TCCGGA 1 cut(s) 3630
BseBI CCWGG 6 cut(s) 452, 653, 745, 1154, 2495, 3801
BseDI CCNNGG 4 cut(s) 292, 3018, 3799, 3854
BseJI GATNNNNATC 2 cut(s) 1449, 4026
BseLI CCNNNNNNNGG 6 cut(s) 3223, 3242, 3486, 3520, 3957, 3958
BseMI GCAATG 2 cut(s) 1396, 3775
BseNI ACTGG 2 cut(s) 60, 1185
BseRI GAGGAG 2 cut(s) 371, 2666
BseSI GKGCMC 3 cut(s) 1520, 1580, 3331
BseXI GCAGC 2 cut(s) 121, 1798
BseYI CCCAGC 2 cut(s) 685, 3271
BshFI GGCC 3 cut(s) 455, 1492, 3073
BsiHKAI GWGCWC 3 cut(s) 1318, 1520, 3331
BsiHKCI CYCGRG 1 cut(s) 861
BsiSI CCGG 4 cut(s) 441, 1429, 1683, 3631
BslFI GGGAC 4 cut(s) 72, 828, 3484, 3487
BslI CCNNNNNNNGG 6 cut(s) 3223, 3242, 3486, 3520, 3957, 3958
BsmAI GTCTC 9 cut(s) 137, 293, 511, 2264, 2803, 3152, 3183, 3393, 3771
BsmBI CGTCTC 5 cut(s) 137, 2264, 3152, 3183, 3771
BsmFI GGGAC 4 cut(s) 72, 828, 3484, 3487
BsmI GAATGC 2 cut(s) 1404, 2137
BsnI GGCC 3 cut(s) 455, 1492, 3073
BsoBI CYCGRG 1 cut(s) 861
Bsp1286I GDGCHC 4 cut(s) 1318, 1520, 1580, 3331
Bsp13I TCCGGA 1 cut(s) 3630
Bsp19I CCATGG 1 cut(s) 292
BspACI CCGC 9 cut(s) 893, 1218, 1540, 2043, 2182, 2382, 2861, 3275, 3618
BspANI GGCC 3 cut(s) 455, 1492, 3073
BspEI TCCGGA 1 cut(s) 3630
BspHI TCATGA 1 cut(s) 2871
BspLI GGNNCC 4 cut(s) 3165, 3472, 3473, 3962
BspMAI CTGCAG 1 cut(s) 89
BspPI GGATC 5 cut(s) 120, 1815, 3285, 3531, 3990
BspQI GCTCTTC 3 cut(s) 718, 2082, 4077
BspTI CTTAAG 2 cut(s) 1102, 1507
BsrDI GCAATG 2 cut(s) 1396, 3775
BsrI ACTGG 2 cut(s) 60, 1185
BssECI CCNNGG 4 cut(s) 292, 3018, 3799, 3854
BssNAI GTATAC 1 cut(s) 989
BssNI GRCGYC 3 cut(s) 49, 61, 3176
BssT1I CCWWGG 2 cut(s) 292, 3854
Bst1107I GTATAC 1 cut(s) 989
Bst2UI CCWGG 6 cut(s) 452, 653, 745, 1154, 2495, 3801
Bst6I CTCTTC 7 cut(s) 718, 1125, 1899, 2082, 2652, 2952, 4077
BstACI GRCGYC 3 cut(s) 49, 61, 3176
BstAFI CTTAAG 2 cut(s) 1102, 1507
BstC8I GCNNGC 9 cut(s) 585, 730, 891, 961, 1799, 2008, 3345, 3766, 4089
BstDEI CTNAG 4 cut(s) 1790, 1808, 2263, 3706
BstDSI CCRYGG 2 cut(s) 292, 3018
BstH2I RGCGCY 1 cut(s) 1160
BstHHI GCGC 1 cut(s) 1159
BstMAI GTCTC 9 cut(s) 137, 293, 511, 2264, 2803, 3152, 3183, 3393, 3771
BstMWI GCNNNNNNNGC 4 cut(s) 1154, 1702, 3435, 3794
BstNI CCWGG 6 cut(s) 452, 653, 745, 1154, 2495, 3801
BstNSI RCATGY 2 cut(s) 2279, 2452
BstPAI GACNNNNGTC 1 cut(s) 3738
BstSCI CCNGG 6 cut(s) 450, 651, 743, 1152, 2493, 3799
BstSFI CTRYAG 4 cut(s) 85, 107, 2021, 2355
BstSLI GKGCMC 3 cut(s) 1520, 1580, 3331
BstV1I GCAGC 2 cut(s) 121, 1798
BstV2I GAAGAC 3 cut(s) 1859, 2259, 2439
BstX2I RGATCY 3 cut(s) 1820, 2246, 3523
BstYI RGATCY 3 cut(s) 1820, 2246, 3523
BstZ17I GTATAC 1 cut(s) 989
BsuI GTATCC 3 cut(s) 741, 2389, 2878
BsuRI GGCC 3 cut(s) 455, 1492, 3073
BtgI CCRYGG 2 cut(s) 292, 3018
BtgZI GCGATG 2 cut(s) 2442, 2786
BtrI CACGTC 1 cut(s) 2782
BtsI GCAGTG 3 cut(s) 82, 234, 1334
BtsIMutI CAGTG 9 cut(s) 82, 228, 234, 1311, 1334, 1381, 1893, 3074, 3699
Cac8I GCNNGC 9 cut(s) 585, 730, 891, 961, 1799, 2008, 3345, 3766, 4089
CciI TCATGA 1 cut(s) 2871
CfoI GCGC 1 cut(s) 1159
Cfr13I GGNCC 5 cut(s) 3263, 3352, 3471, 3511, 3961
CseI GACGC 4 cut(s) 69, 2081, 2281, 3505
Csp6I GTAC 1 cut(s) 28
CspCI CAANNNNNGTGG 3 cut(s) 38, 3753, 3788
CviQI GTAC 1 cut(s) 28
DdeI CTNAG 4 cut(s) 1790, 1808, 2263, 3706
DrdI GACNNNNNNGTC 1 cut(s) 822
DriI GACNNNNNGTC 2 cut(s) 200, 318
DseDI GACNNNNNNGTC 1 cut(s) 822
EaeI YGGCCR 2 cut(s) 1490, 3071
Eam1104I CTCTTC 7 cut(s) 718, 1125, 1899, 2082, 2652, 2952, 4077
Eam1105I GACNNNNNGTC 2 cut(s) 200, 318
EarI CTCTTC 7 cut(s) 718, 1125, 1899, 2082, 2652, 2952, 4077
EciI GGCGGA 3 cut(s) 908, 2371, 2850
Eco130I CCWWGG 2 cut(s) 292, 3854
Eco147I AGGCCT 1 cut(s) 455
Eco47I GGWCC 5 cut(s) 3263, 3352, 3471, 3511, 3961
Eco57I CTGAAG 5 cut(s) 186, 573, 1181, 2271, 3560
Eco88I CYCGRG 1 cut(s) 861
EcoO109I RGGNCCY 2 cut(s) 3471, 3961
EcoRII CCWGG 6 cut(s) 450, 651, 743, 1152, 2493, 3799
EcoT14I CCWWGG 2 cut(s) 292, 3854
EcoT22I ATGCAT 2 cut(s) 1404, 2137
ErhI CCWWGG 2 cut(s) 292, 3854
Esp3I CGTCTC 5 cut(s) 137, 2264, 3152, 3183, 3771
FalI AAGNNNNNCTT 2 cut(s) 2649, 2681
FaqI GGGAC 4 cut(s) 72, 828, 3484, 3487
FauI CCCGC 1 cut(s) 2189
FbaI TGATCA 2 cut(s) 2742, 4027
FblI GTMKAC 4 cut(s) 52, 988, 1136, 3850
Fnu4HI GCNGC 2 cut(s) 135, 1787
Fsp4HI GCNGC 2 cut(s) 135, 1787
GlaI GCGC 1 cut(s) 1158
GluI GCNGC 2 cut(s) 135, 1787
GsaI CCCAGC 2 cut(s) 689, 3275
GsuI CTGGAG 1 cut(s) 3347
HaeII RGCGCY 1 cut(s) 1160
HaeIII GGCC 3 cut(s) 455, 1492, 3073
HapII CCGG 4 cut(s) 441, 1429, 1683, 3631
HgaI GACGC 4 cut(s) 69, 2081, 2281, 3505
HhaI GCGC 1 cut(s) 1159
Hin1I GRCGYC 3 cut(s) 49, 61, 3176
Hin6I GCGC 1 cut(s) 1157
HinP1I GCGC 1 cut(s) 1157
HincII GTYRAC 3 cut(s) 849, 1137, 2071
HindII GTYRAC 3 cut(s) 849, 1137, 2071
HindIII AAGCTT 5 cut(s) 1730, 2201, 2474, 3345, 3703
HpaII CCGG 4 cut(s) 441, 1429, 1683, 3631
HphI GGTGA 7 cut(s) 194, 1487, 1619, 1905, 1948, 2003, 2597
Hpy99I CGWCG 2 cut(s) 968, 2179
HpyCH4IV ACGT 7 cut(s) 49, 762, 966, 1296, 1739, 2781, 3176
HpyF10VI GCNNNNNNNGC 4 cut(s) 1154, 1702, 3435, 3794
HpyF3I CTNAG 4 cut(s) 1790, 1808, 2263, 3706
HpySE526I ACGT 7 cut(s) 49, 762, 966, 1296, 1739, 2781, 3176
Hsp92I GRCGYC 3 cut(s) 49, 61, 3176
HspAI GCGC 1 cut(s) 1157
KflI GGGWCCC 1 cut(s) 3471
Kpn2I TCCGGA 1 cut(s) 3630
Ksp22I TGATCA 2 cut(s) 2742, 4027
LguI GCTCTTC 3 cut(s) 718, 2082, 4077
LmnI GCTCC 3 cut(s) 4, 1313, 2145
Lsp1109I GCAGC 2 cut(s) 121, 1798
LweI GCATC 8 cut(s) 876, 1087, 1745, 2335, 2612, 3445, 3775, 3784
MaeII ACGT 7 cut(s) 49, 762, 966, 1296, 1739, 2781, 3176
MaeIII GTNAC 6 cut(s) 433, 1045, 1475, 2837, 3010, 3907
MfeI CAATTG 2 cut(s) 1856, 1888
MflI RGATCY 3 cut(s) 1820, 2246, 3523
MhlI GDGCHC 4 cut(s) 1318, 1520, 1580, 3331
MlsI TGGCCA 2 cut(s) 1492, 3073
MluNI TGGCCA 2 cut(s) 1492, 3073
MmeI TCCRAC 6 cut(s) 25, 1350, 1662, 1857, 2105, 2809
Mox20I TGGCCA 2 cut(s) 1492, 3073
Mph1103I ATGCAT 2 cut(s) 1404, 2137
MroI TCCGGA 1 cut(s) 3630
MroXI GAANNNNTTC 3 cut(s) 660, 1593, 3573
MscI TGGCCA 2 cut(s) 1492, 3073
MslI CAYNNNNRTG 1 cut(s) 3453
Msp20I TGGCCA 2 cut(s) 1492, 3073
MspA1I CMGCKG 2 cut(s) 3275, 3580
MspCI CTTAAG 2 cut(s) 1102, 1507
MspI CCGG 4 cut(s) 441, 1429, 1683, 3631
MspR9I CCNGG 6 cut(s) 452, 653, 745, 1154, 2495, 3801
MunI CAATTG 2 cut(s) 1856, 1888
Mva1269I GAATGC 2 cut(s) 1404, 2137
MvaI CCWGG 6 cut(s) 452, 653, 745, 1154, 2495, 3801
MwoI GCNNNNNNNGC 4 cut(s) 1154, 1702, 3435, 3794
NcoI CCATGG 1 cut(s) 292
NlaIV GGNNCC 4 cut(s) 3165, 3472, 3473, 3962
NmuCI GTSAC 4 cut(s) 1045, 1475, 2837, 3907
NsiI ATGCAT 2 cut(s) 1404, 2137
NspI RCATGY 2 cut(s) 2279, 2452
PaeR7I CTCGAG 1 cut(s) 861
PagI TCATGA 1 cut(s) 2871
PceI AGGCCT 1 cut(s) 455
PciSI GCTCTTC 3 cut(s) 718, 2082, 4077
PctI GAATGC 2 cut(s) 1404, 2137
PdmI GAANNNNTTC 3 cut(s) 660, 1593, 3573
PfeI GAWTC 9 cut(s) 461, 1502, 2112, 2351, 2502, 3031, 3209, 3634, 4049
PflFI GACNNNGTC 2 cut(s) 899, 3499
PflMI CCANNNNNTGG 2 cut(s) 3242, 3520
PkrI GCNGC 2 cut(s) 136, 1788
PpuMI RGGWCCY 2 cut(s) 3471, 3961
PshAI GACNNNNGTC 1 cut(s) 3738
PshBI ATTAAT 1 cut(s) 659
Psp1406I AACGTT 2 cut(s) 762, 1739
Psp5II RGGWCCY 2 cut(s) 3471, 3961
Psp6I CCWGG 6 cut(s) 450, 651, 743, 1152, 2493, 3799
PspFI CCCAGC 2 cut(s) 685, 3271
PspGI CCWGG 6 cut(s) 450, 651, 743, 1152, 2493, 3799
PspN4I GGNNCC 4 cut(s) 3165, 3472, 3473, 3962
PspPI GGNCC 5 cut(s) 3263, 3352, 3471, 3511, 3961
PspPPI RGGWCCY 2 cut(s) 3471, 3961
PstI CTGCAG 1 cut(s) 89
PsuI RGATCY 3 cut(s) 1820, 2246, 3523
PsyI GACNNNGTC 2 cut(s) 899, 3499
PvuII CAGCTG 1 cut(s) 3580
RsaI GTAC 1 cut(s) 29
RsaNI GTAC 1 cut(s) 28
RseI CAYNNNNRTG 1 cut(s) 3453
SalI GTCGAC 1 cut(s) 1135
SapI GCTCTTC 3 cut(s) 718, 2082, 4077
SatI GCNGC 2 cut(s) 135, 1787
Sau96I GGNCC 5 cut(s) 3263, 3352, 3471, 3511, 3961
ScrFI CCNGG 6 cut(s) 452, 653, 745, 1154, 2495, 3801
SduI GDGCHC 4 cut(s) 1318, 1520, 1580, 3331
SfaNI GCATC 8 cut(s) 876, 1087, 1745, 2335, 2612, 3445, 3775, 3784
SfcI CTRYAG 4 cut(s) 85, 107, 2021, 2355
Sfr274I CTCGAG 1 cut(s) 861
SinI GGWCC 5 cut(s) 3263, 3352, 3471, 3511, 3961
SlaI CTCGAG 1 cut(s) 861
SmiMI CAYNNNNRTG 1 cut(s) 3453
SmlI CTYRAG 5 cut(s) 861, 1102, 1507, 2191, 2813
SmoI CTYRAG 5 cut(s) 861, 1102, 1507, 2191, 2813
SseBI AGGCCT 1 cut(s) 455
SsiI CCGC 9 cut(s) 893, 1218, 1540, 2043, 2182, 2382, 2861, 3275, 3618
SspI AATATT 4 cut(s) 1546, 2119, 2347, 2440
StuI AGGCCT 1 cut(s) 455
StyD4I CCNGG 6 cut(s) 450, 651, 743, 1152, 2493, 3799
StyI CCWWGG 2 cut(s) 292, 3854
TaiI ACGT 7 cut(s) 52, 765, 969, 1299, 1742, 2784, 3179
TaqI TCGA 5 cut(s) 204, 862, 1136, 1870, 3219
TaqII GACCGA 1 cut(s) 3340
TfiI GAWTC 9 cut(s) 461, 1502, 2112, 2351, 2502, 3031, 3209, 3634, 4049
TscAI CASTG 9 cut(s) 89, 228, 241, 1311, 1341, 1381, 1900, 3074, 3699
TseFI GTSAC 4 cut(s) 1045, 1475, 2837, 3907
TseI GCWGC 2 cut(s) 134, 1786
Tsp45I GTSAC 4 cut(s) 1045, 1475, 2837, 3907
TspDTI ATGAA 6 cut(s) 723, 2235, 2445, 2569, 2649, 2724
TspGWI ACGGA 9 cut(s) 260, 308, 430, 735, 2520, 2923, 3007, 3176, 3895
TspRI CASTG 9 cut(s) 89, 228, 241, 1311, 1341, 1381, 1900, 3074, 3699
Tth111I GACNNNGTC 2 cut(s) 899, 3499
Van91I CCANNNNNTGG 2 cut(s) 3242, 3520
Vha464I CTTAAG 2 cut(s) 1102, 1507
VneI GTGCAC 2 cut(s) 1516, 3327
VpaK11BI GGWCC 5 cut(s) 3263, 3352, 3471, 3511, 3961
VspI ATTAAT 1 cut(s) 659
XapI RAATTY 9 cut(s) 386, 840, 994, 1803, 3117, 3131, 3252, 3562, 3893
XbaI TCTAGA 1 cut(s) 3526
XceI RCATGY 2 cut(s) 2279, 2452
XcmI CCANNNNNNNNNTGG 1 cut(s) 401
XhoI CTCGAG 1 cut(s) 861
XmiI GTMKAC 4 cut(s) 52, 988, 1136, 3850
XmnI GAANNNNTTC 3 cut(s) 660, 1593, 3573
ZraI GACGTC 2 cut(s) 50, 3177
Zsp2I ATGCAT 2 cut(s) 1404, 2137
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.