Rmu_sc0000571.1_g000009

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000571.1
Physical Location & Seq
Forward (+)
33533 .. 37540
4008 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000571.1_g000009.1.cds

Sequence Viewer

Length: 3288 bp
atggagattcttgtttcagttgctggaaaacttgctgaatacacagttgaaccaattggacgccaagtgggttatctagctcactacaaacgcaaccatcaaaagctgcagaccaaattggaggacttaagtgctgccagggatgaggttcaacataaggttgatcaagtcaacagaggaggtaagagaatcgagactactgttctgaactggaagacaagagtggatgcaatcatcacagaagcagagaaattgctgaaagacaaccgccatgcccagaccgagtgtcttcatggtttttgtcctcatttggtgctccgttatcaactaagcaagaactcaacaaaattggtggaggagattgatgaactttatggaaaaaaggaattctccaactttacatatgatgttcttccacaagatttatgtctcttatctaccgggcattacagtacatttgattcaaggaattcaattatgatgagagtcatggatgaactgagaaatcctaatacagaaatgattctggtgtgtggaatcggtggagtagggaagaccacactcgttgaagaagttcttaggcaagctaaggatgttaacttatttgatgatttggtgatggtgagagatgtgaaagagaacccagaccttgaaaaaatccaaaaagaaattgccatgaagttgggtatgaacattgacgaaaatcatactctagctcaaagagcgccccttctaggtgacaggataaaacagaagaggactcttgtagttttagacgatgtttgggaaaaaattgatctagtggctgtcggagttccccgcctggttacttgtaaagtagtgctgacatgtagaagtcgaaaggaactgtccttcgatatgcgtaaacaaacagatatttcacttgatgttttaaatgaagaggaagcatggagtttatttgagaagatggctggtgatgttgtcaaagatggccgcatacgaaacgtagcaattgaagtagctaaaaaatgtggaggtttgccggtcttgattgttacggttgcaagagctgtaaaagacagaaacaatattcgtgcatggaaagacaccttgagacgccttggaggctttgacaacaaagaatttacggaaaaagcatacttggctctggagtggagttatgatcaattggaagataaagagcttaaaccgttgttcttgctttgtgggattattgtagttaagaaccatatttatttggcagacttgttgaaatatggttttgggttgggtttgataaaaaatgtcaatacaatagaagaagcacgagatgcattggatccactggttgaaaagcttaaagattcttgcttgttgctggacagtgatatcaatatgcatgttagaatgcatgatctcgtatgcgaggttgctgcgtggattgcatccagaaaacaccacgtcttatcggttggatatggtggtgaattgaaagaatggcctgataaggatttctttaaaaggtgttgtaagatgtctttaaaatccaacaatattcccatgctttctcaagtatctggggaatgtcagaaactagaaatgttttatttgtacaataaaggtgttgcatcggtggaaattccttccaacttttttaatgaaatggagaaactgaaagttttgggtttaactgaagtgaatatggtgtccctaccttcatctcttcagttgttgaagaatgttcagacgttgtgtttagaagactgcaggttggaagatgtagctcatgttggacatctaagcaacttacagattcttagctttgcgcggtccaacattaaaaagctacctgaagaaataggacaattgattcaactgagatggttggatttgagtgattgtgccaaacttgaagtgatttcgcctaatgttatttcaaggttggaaagactagaagacttgacattgagaaacgtctttctcaaatgggaggctgaaaagggaggaagtaatgctagtcttttagagctgaaagacttgtctcaactaactgccttggagatatatattgaagatgcaaatattcttccatcaaacttgttctccagtaagttgttaagataccaaatatatattggcgatgtttggaagggcatatgtagttgggagaaaactatggctgaaacggccctcaacacgctaaagctaaagctcgctcccaacgatgaattggaccatggtatcaaaacattgttgaagagatctgaagatttgtctttggatggaacagaaagtgttaaaagtattgcccatcaattacatgttgaggattttcaacaactgatacacctccatctccaaaacaatgttgatttcacctatatcattaataagaaggttgtgttcccctacttaacaactttgagcgtatccagctgccatcatctaagattcttgttctcaatttctatggctaatagtctggtggagctcaagcatctcgaagtatcctcatgtgcaataatggaagcgatagtatcaacaagagatcaacccaatggaaaaaatatttgtatcatatttcgtaagttggaaagtctaacactggaccaactcccaaaccttgctagattctttattgaaagttgtattgaattcccccccgtgaagaaatttgatacagagtcaggggcatccatctttgatcctacaagcagtaaaaaacttgatgtcgagagtaggactgctgcacaatcctgtctttttgacgcacaggtaaaatttccgagcttggagagattgaaaatcaatgagctagggaagttgcagacactatggaacaaccaacttgtggatcaagactctttttcaagactcaaagaagttaatgtttcccactgcaacagtgtaacgaatgtgtttgtgcctagaatgatggggagactgaatgctctagaaaccttatacatatccaattgcgactcactagaagtggtattcgaagcggaggaaattattggcggtgaacaaggactagaaacagggcctccacatttcgtgttcccaaaagtaacacatgtggaattttctgatctgcccaaactgagtaggttctatcccgggattcatgcttccaagtggccgttgctccaaaaactgtccatttatcgctgtggtaaagtaatgaagatatttgctgcagaacttccaatttttccgggacaatctctctttctaattgacaaggtacacaattttcatatgaaatttctccttgaaaattttctttgtgaatttatgttctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1095

Amino Acids

124.76

Weight (kDa)

6.18

Isoelectric Point (pI)

41.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1740
AccB7I CCANNNNNTGG 1 cut(s) 2833
AccII CGCG 1 cut(s) 1810
AciI CCGC 6 cut(s) 268, 820, 976, 1810, 2987, 3003
AclWI GGATC 4 cut(s) 1316, 1329, 2681, 2844
AcoI YGGCCR 2 cut(s) 973, 3122
AcuI CTGAAG 4 cut(s) 1691, 1695, 1854, 2268
AcyI GRCGYC 2 cut(s) 61, 1099
AfaI GTAC 3 cut(s) 454, 1595, 3231
AfiI CCNNNNNNNGG 2 cut(s) 734, 2833
AflII CTTAAG 1 cut(s) 127
AflIII ACRYGT 3 cut(s) 848, 2302, 3058
AhdI GACNNNNNGTC 1 cut(s) 285
AjiI CACGTC 1 cut(s) 1444
AjnI CCWGG 2 cut(s) 137, 822
Alw21I GWGCWC 2 cut(s) 318, 2475
Alw26I GTCTC 5 cut(s) 188, 434, 1090, 2028, 2917
AlwI GGATC 4 cut(s) 1316, 1329, 2681, 2844
AlwNI CAGNNNCTG 1 cut(s) 23
Ama87I CYCGRG 1 cut(s) 3101
AoxI GGCC 5 cut(s) 973, 1481, 2169, 3026, 3122
ApeKI GCWGC 6 cut(s) 106, 134, 1415, 2418, 2729, 3179
AseI ATTAAT 1 cut(s) 2370
Asp700I GAANNNNTTC 3 cut(s) 522, 573, 3264
AspLEI GCGC 2 cut(s) 727, 1810
AspS9I GGNCC 5 cut(s) 1812, 2170, 2215, 2590, 3026
AsuC2I CCSGG 4 cut(s) 442, 3102, 3103, 3201
AsuHPI GGTGA 7 cut(s) 628, 634, 749, 968, 1478, 2350, 3017
AsuII TTCGAA 1 cut(s) 2982
AvaI CYCGRG 1 cut(s) 3101
AvaII GGWCC 3 cut(s) 1812, 2215, 2590
BaeI ACNNNNGTAYC 2 cut(s) 2206, 2239
BamHI GGATCC 1 cut(s) 1321
BanII GRGCYC 1 cut(s) 2475
BauI CACGAG 1 cut(s) 1308
BbsI GAAGAC 5 cut(s) 221, 281, 560, 1749, 1944
Bbv12I GWGCWC 2 cut(s) 318, 2475
BbvI GCAGC 6 cut(s) 93, 121, 1402, 2405, 2716, 3166
BceAI ACGGC 2 cut(s) 2184, 3109
BcgI CGANNNNNNTGC 2 cut(s) 1397, 1431
BciT130I CCWGG 2 cut(s) 139, 824
BciVI GTATCC 2 cut(s) 2422, 2500
BclI TGATCA 2 cut(s) 163, 1165
BcnI CCSGG 4 cut(s) 442, 3102, 3103, 3201
BcoDI GTCTC 5 cut(s) 188, 434, 1090, 2028, 2917
BfmI CTRYAG 3 cut(s) 107, 1747, 3180
BfoI RGCGCY 1 cut(s) 728
BfrI CTTAAG 1 cut(s) 127
BfuAI ACCTGC 1 cut(s) 1740
BfuI GTATCC 2 cut(s) 2422, 2500
BglI GCCNNNNNGGC 1 cut(s) 1107
BglII AGATCT 1 cut(s) 2243
BisI GCNGC 7 cut(s) 107, 135, 976, 1416, 2419, 2730, 3180
BlsI GCNGC 7 cut(s) 108, 136, 977, 1417, 2420, 2731, 3181
Bme1390I CCNGG 6 cut(s) 139, 442, 824, 3102, 3103, 3201
Bme18I GGWCC 3 cut(s) 1812, 2215, 2590
BmeRI GACNNNNNGTC 1 cut(s) 285
BmeT110I CYCGRG 1 cut(s) 3101
BmgBI CACGTC 1 cut(s) 1444
BmgT120I GGNCC 5 cut(s) 1812, 2170, 2215, 2590, 3026
BmiI GGNNCC 1 cut(s) 1323
BmrFI CCNGG 6 cut(s) 139, 442, 824, 3102, 3103, 3201
BmsI GCATC 7 cut(s) 217, 1303, 1436, 1619, 2047, 2488, 2684
BpiI GAAGAC 5 cut(s) 221, 281, 560, 1749, 1944
BpmI CTGGAG 2 cut(s) 1172, 2071
Bpu10I CCTNAGC 1 cut(s) 588
Bpu14I TTCGAA 1 cut(s) 2982
BpuEI CTTGAG 3 cut(s) 1114, 1536, 2459
BpuMI CCSGG 4 cut(s) 442, 3102, 3103, 3201
BsaHI GRCGYC 2 cut(s) 61, 1099
BsaJI CCNNGG 5 cut(s) 138, 1102, 2037, 2218, 3101
BsaXI ACNNNNNCTCC 4 cut(s) 2069, 2099, 3013, 3043
Bsc4I CCNNNNNNNGG 2 cut(s) 734, 2833
Bse118I RCCGGY 1 cut(s) 1024
Bse1I ACTGG 4 cut(s) 215, 1332, 2088, 2592
BseBI CCWGG 2 cut(s) 139, 824
BseDI CCNNGG 5 cut(s) 138, 1102, 2037, 2218, 3101
BseGI GGATG 7 cut(s) 148, 232, 499, 598, 1427, 2269, 2675
BseLI CCNNNNNNNGG 2 cut(s) 734, 2833
BseMII CTCAG 3 cut(s) 491, 1850, 3077
BseNI ACTGG 4 cut(s) 215, 1332, 2088, 2592
BseRI GAGGAG 2 cut(s) 192, 371
BseXI GCAGC 6 cut(s) 93, 121, 1402, 2405, 2716, 3166
BsgI GTGCAG 1 cut(s) 2715
Bsh1236I CGCG 1 cut(s) 1810
BshFI GGCC 5 cut(s) 975, 1483, 2171, 3028, 3124
BsiHKAI GWGCWC 2 cut(s) 318, 2475
BsiHKCI CYCGRG 1 cut(s) 3101
BsiSI CCGG 4 cut(s) 441, 1025, 3102, 3200
BslFI GGGAC 2 cut(s) 1675, 3216
BslI CCNNNNNNNGG 2 cut(s) 734, 2833
BsmAI GTCTC 5 cut(s) 188, 434, 1090, 2028, 2917
BsmBI CGTCTC 1 cut(s) 1090
BsmFI GGGAC 2 cut(s) 1675, 3216
BsmI GAATGC 2 cut(s) 1395, 2935
BsnI GGCC 5 cut(s) 975, 1483, 2171, 3028, 3124
BsoBI CYCGRG 1 cut(s) 3101
Bsp119I TTCGAA 1 cut(s) 2982
Bsp1286I GDGCHC 2 cut(s) 318, 2475
Bsp1407I TGTACA 1 cut(s) 1593
Bsp19I CCATGG 1 cut(s) 2218
BspACI CCGC 6 cut(s) 268, 820, 976, 1810, 2987, 3003
BspANI GGCC 5 cut(s) 975, 1483, 2171, 3028, 3124
BspCNI CTCAG 3 cut(s) 492, 1851, 3078
BspFNI CGCG 1 cut(s) 1810
BspLI GGNNCC 1 cut(s) 1323
BspMAI CTGCAG 3 cut(s) 111, 1751, 3184
BspMI ACCTGC 1 cut(s) 1740
BspPI GGATC 4 cut(s) 1316, 1329, 2681, 2844
BspT104I TTCGAA 1 cut(s) 2982
BspTI CTTAAG 1 cut(s) 127
BsrFI RCCGGY 1 cut(s) 1024
BsrGI TGTACA 1 cut(s) 1593
BsrI ACTGG 4 cut(s) 215, 1332, 2088, 2592
BssAI RCCGGY 1 cut(s) 1024
BssECI CCNNGG 5 cut(s) 138, 1102, 2037, 2218, 3101
BssNI GRCGYC 2 cut(s) 61, 1099
BssSI CACGAG 1 cut(s) 1308
BssT1I CCWWGG 3 cut(s) 1102, 2037, 2218
Bst2BI CACGAG 1 cut(s) 1308
Bst2UI CCWGG 2 cut(s) 139, 824
Bst4CI ACNGT 9 cut(s) 46, 202, 452, 870, 1042, 1194, 1367, 2888, 3141
Bst6I CTCTTC 4 cut(s) 749, 915, 1710, 2234
BstACI GRCGYC 2 cut(s) 61, 1099
BstAFI CTTAAG 1 cut(s) 127
BstAPI GCANNNNNTGC 1 cut(s) 1313
BstAUI TGTACA 1 cut(s) 1593
BstBI TTCGAA 1 cut(s) 2982
BstC8I GCNNGC 2 cut(s) 585, 2196
BstDEI CTNAG 9 cut(s) 329, 500, 578, 588, 1781, 1799, 1859, 2429, 3086
BstDSI CCRYGG 1 cut(s) 2218
BstF5I GGATG 7 cut(s) 148, 232, 499, 598, 1427, 2269, 2675
BstFNI CGCG 1 cut(s) 1810
BstH2I RGCGCY 1 cut(s) 728
BstHHI GCGC 2 cut(s) 727, 1810
BstMAI GTCTC 5 cut(s) 188, 434, 1090, 2028, 2917
BstMWI GCNNNNNNNGC 7 cut(s) 722, 1107, 1145, 1313, 1424, 2168, 2415
BstNI CCWGG 2 cut(s) 139, 824
BstNSI RCATGY 4 cut(s) 852, 1385, 2306, 3062
BstSCI CCNGG 6 cut(s) 137, 440, 822, 3100, 3101, 3199
BstSFI CTRYAG 3 cut(s) 107, 1747, 3180
BstUI CGCG 1 cut(s) 1810
BstV1I GCAGC 6 cut(s) 93, 121, 1402, 2405, 2716, 3166
BstV2I GAAGAC 5 cut(s) 221, 281, 560, 1749, 1944
BstX2I RGATCY 2 cut(s) 1321, 2243
BstXI CCANNNNNNTGG 1 cut(s) 682
BstYI RGATCY 2 cut(s) 1321, 2243
BsuI GTATCC 2 cut(s) 2422, 2500
BsuRI GGCC 5 cut(s) 975, 1483, 2171, 3028, 3124
BtgI CCRYGG 1 cut(s) 2218
BtgZI GCGATG 1 cut(s) 2136
BtrI CACGTC 1 cut(s) 1444
BtsCI GGATG 7 cut(s) 148, 232, 499, 598, 1427, 2269, 2675
BtsI GCAGTG 1 cut(s) 2878
BtsIMutI CAGTG 5 cut(s) 1325, 1372, 2585, 2878, 2893
BveI ACCTGC 1 cut(s) 1740
Cac8I GCNNGC 2 cut(s) 585, 2196
CaiI CAGNNNCTG 1 cut(s) 23
CfoI GCGC 2 cut(s) 727, 1810
Cfr10I RCCGGY 1 cut(s) 1024
Cfr13I GGNCC 5 cut(s) 1812, 2170, 2215, 2590, 3026
Cfr9I CCCGGG 1 cut(s) 3101
CseI GACGC 3 cut(s) 69, 1107, 2759
Csp6I GTAC 3 cut(s) 453, 1594, 3230
CspCI CAANNNNNGTGG 4 cut(s) 333, 368, 547, 582
CviQI GTAC 3 cut(s) 453, 1594, 3230
DdeI CTNAG 9 cut(s) 329, 500, 578, 588, 1781, 1799, 1859, 2429, 3086
DraI TTTAAA 3 cut(s) 915, 1501, 1524
DriI GACNNNNNGTC 1 cut(s) 285
EaeI YGGCCR 2 cut(s) 973, 3122
Eam1104I CTCTTC 4 cut(s) 749, 915, 1710, 2234
Eam1105I GACNNNNNGTC 1 cut(s) 285
EarI CTCTTC 4 cut(s) 749, 915, 1710, 2234
Ecl136II GAGCTC 1 cut(s) 2473
Eco130I CCWWGG 3 cut(s) 1102, 2037, 2218
Eco24I GRGCYC 1 cut(s) 2475
Eco32I GATATC 1 cut(s) 1372
Eco47I GGWCC 3 cut(s) 1812, 2215, 2590
Eco53kI GAGCTC 1 cut(s) 2473
Eco57I CTGAAG 4 cut(s) 1691, 1695, 1854, 2268
Eco88I CYCGRG 1 cut(s) 3101
EcoICRI GAGCTC 1 cut(s) 2473
EcoO109I RGGNCCY 1 cut(s) 3026
EcoRI GAATTC 3 cut(s) 386, 469, 2636
EcoRII CCWGG 2 cut(s) 137, 822
EcoRV GATATC 1 cut(s) 1372
EcoT14I CCWWGG 3 cut(s) 1102, 2037, 2218
EcoT22I ATGCAT 3 cut(s) 1318, 1383, 1395
EcoT38I GRGCYC 1 cut(s) 2475
ErhI CCWWGG 3 cut(s) 1102, 2037, 2218
Esp3I CGTCTC 1 cut(s) 1090
FalI AAGNNNNNCTT 4 cut(s) 561, 593, 1481, 1513
FaqI GGGAC 2 cut(s) 1675, 3216
FauI CCCGC 1 cut(s) 827
FauNDI CATATG 3 cut(s) 403, 2138, 3243
FbaI TGATCA 2 cut(s) 163, 1165
Fnu4HI GCNGC 7 cut(s) 107, 135, 976, 1416, 2419, 2730, 3180
FokI GGATG 7 cut(s) 155, 239, 506, 605, 1414, 2276, 2662
FriOI GRGCYC 1 cut(s) 2475
Fsp4HI GCNGC 7 cut(s) 107, 135, 976, 1416, 2419, 2730, 3180
GlaI GCGC 2 cut(s) 726, 1809
GluI GCNGC 7 cut(s) 107, 135, 976, 1416, 2419, 2730, 3180
GsuI CTGGAG 2 cut(s) 1172, 2071
HaeII RGCGCY 1 cut(s) 728
HaeIII GGCC 5 cut(s) 975, 1483, 2171, 3028, 3124
HapII CCGG 4 cut(s) 441, 1025, 3102, 3200
HgaI GACGC 3 cut(s) 69, 1107, 2759
HhaI GCGC 2 cut(s) 727, 1810
Hin1I GRCGYC 2 cut(s) 61, 1099
Hin6I GCGC 2 cut(s) 725, 1808
HinP1I GCGC 2 cut(s) 725, 1808
HincII GTYRAC 2 cut(s) 172, 598
HindII GTYRAC 2 cut(s) 172, 598
HindIII AAGCTT 1 cut(s) 1337
HpaI GTTAAC 1 cut(s) 598
HpaII CCGG 4 cut(s) 441, 1025, 3102, 3200
HphI GGTGA 7 cut(s) 628, 634, 749, 968, 1478, 2350, 3017
Hpy166II GTNNAC 5 cut(s) 172, 598, 887, 3008, 3232
Hpy188I TCNGA 7 cut(s) 207, 812, 1572, 1728, 2248, 2769, 3073
Hpy188III TCNNGA 9 cut(s) 193, 1030, 1151, 1431, 2483, 2716, 2840, 2853, 2936
Hpy8I GTNNAC 5 cut(s) 172, 598, 887, 3008, 3232
HpyAV CCTTC 6 cut(s) 740, 883, 1635, 1707, 2125, 2371
HpyCH4III ACNGT 9 cut(s) 46, 202, 452, 870, 1042, 1194, 1367, 2888, 3141
HpyCH4IV ACGT 4 cut(s) 987, 1443, 1730, 1956
HpyF10VI GCNNNNNNNGC 7 cut(s) 722, 1107, 1145, 1313, 1424, 2168, 2415
HpyF3I CTNAG 9 cut(s) 329, 500, 578, 588, 1781, 1799, 1859, 2429, 3086
HpySE526I ACGT 4 cut(s) 987, 1443, 1730, 1956
Hsp92I GRCGYC 2 cut(s) 61, 1099
HspAI GCGC 2 cut(s) 725, 1808
Ksp22I TGATCA 2 cut(s) 163, 1165
KspAI GTTAAC 1 cut(s) 598
LmnI GCTCC 4 cut(s) 321, 2203, 2470, 3135
Lsp1109I GCAGC 6 cut(s) 93, 121, 1402, 2405, 2716, 3166
LweI GCATC 7 cut(s) 217, 1303, 1436, 1619, 2047, 2488, 2684
MaeII ACGT 4 cut(s) 987, 1443, 1730, 1956
MaeIII GTNAC 5 cut(s) 737, 826, 1036, 2890, 3052
MfeI CAATTG 5 cut(s) 54, 993, 1169, 1847, 2956
MflI RGATCY 2 cut(s) 1321, 2243
MhlI GDGCHC 2 cut(s) 318, 2475
MlyI GAGTC 6 cut(s) 495, 754, 2675, 2837, 2850, 2957
Mph1103I ATGCAT 3 cut(s) 1318, 1383, 1395
MroXI GAANNNNTTC 3 cut(s) 522, 573, 3264
MspA1I CMGCKG 1 cut(s) 2418
MspCI CTTAAG 1 cut(s) 127
MspI CCGG 4 cut(s) 441, 1025, 3102, 3200
MspR9I CCNGG 6 cut(s) 139, 442, 824, 3102, 3103, 3201
MunI CAATTG 5 cut(s) 54, 993, 1169, 1847, 2956
Mva1269I GAATGC 2 cut(s) 1395, 2935
MvaI CCWGG 2 cut(s) 139, 824
MvnI CGCG 1 cut(s) 1810
MwoI GCNNNNNNNGC 7 cut(s) 722, 1107, 1145, 1313, 1424, 2168, 2415
NciI CCSGG 4 cut(s) 442, 3102, 3103, 3201
NcoI CCATGG 1 cut(s) 2218
NdeI CATATG 3 cut(s) 403, 2138, 3243
NlaIV GGNNCC 1 cut(s) 1323
NmuCI GTSAC 1 cut(s) 737
NsiI ATGCAT 3 cut(s) 1318, 1383, 1395
NspI RCATGY 4 cut(s) 852, 1385, 2306, 3062
NspV TTCGAA 1 cut(s) 2982
PciI ACATGT 3 cut(s) 848, 2302, 3058
PcsI WCGNNNNNNNCGW 1 cut(s) 2202
PctI GAATGC 2 cut(s) 1395, 2935
PdmI GAANNNNTTC 3 cut(s) 522, 573, 3264
PflMI CCANNNNNTGG 1 cut(s) 2833
PfoI TCCNGGA 1 cut(s) 3199
PkrI GCNGC 7 cut(s) 108, 136, 977, 1417, 2420, 2731, 3181
PleI GAGTC 6 cut(s) 494, 754, 2674, 2837, 2850, 2957
PpsI GAGTC 6 cut(s) 494, 754, 2674, 2837, 2850, 2957
PscI ACATGT 3 cut(s) 848, 2302, 3058
PshBI ATTAAT 1 cut(s) 2370
Psp124BI GAGCTC 1 cut(s) 2475
Psp6I CCWGG 2 cut(s) 137, 822
PspGI CCWGG 2 cut(s) 137, 822
PspN4I GGNNCC 1 cut(s) 1323
PspPI GGNCC 5 cut(s) 1812, 2170, 2215, 2590, 3026
PstI CTGCAG 3 cut(s) 111, 1751, 3184
PstNI CAGNNNCTG 1 cut(s) 23
PsuI RGATCY 2 cut(s) 1321, 2243
PvuII CAGCTG 1 cut(s) 2418
RsaI GTAC 3 cut(s) 454, 1595, 3231
RsaNI GTAC 3 cut(s) 453, 1594, 3230
SacI GAGCTC 1 cut(s) 2475
SatI GCNGC 7 cut(s) 107, 135, 976, 1416, 2419, 2730, 3180
Sau96I GGNCC 5 cut(s) 1812, 2170, 2215, 2590, 3026
SchI GAGTC 6 cut(s) 495, 754, 2675, 2837, 2850, 2957
ScrFI CCNGG 6 cut(s) 139, 442, 824, 3102, 3103, 3201
SduI GDGCHC 2 cut(s) 318, 2475
SfaNI GCATC 7 cut(s) 217, 1303, 1436, 1619, 2047, 2488, 2684
SfcI CTRYAG 3 cut(s) 107, 1747, 3180
SfuI TTCGAA 1 cut(s) 2982
SinI GGWCC 3 cut(s) 1812, 2215, 2590
SmaI CCCGGG 1 cut(s) 3103
SmlI CTYRAG 4 cut(s) 127, 1093, 1551, 2474
SmoI CTYRAG 4 cut(s) 127, 1093, 1551, 2474
SsiI CCGC 6 cut(s) 268, 820, 976, 1810, 2987, 3003
SspI AATATT 4 cut(s) 1072, 1537, 2065, 2551
SstI GAGCTC 1 cut(s) 2475
StyD4I CCNGG 6 cut(s) 137, 440, 822, 3100, 3101, 3199
StyI CCWWGG 3 cut(s) 1102, 2037, 2218
TaaI ACNGT 9 cut(s) 46, 202, 452, 870, 1042, 1194, 1367, 2888, 3141
TaiI ACGT 4 cut(s) 990, 1446, 1733, 1959
TaqI TCGA 6 cut(s) 192, 859, 876, 2484, 2715, 2982
TaqII GACCGA 1 cut(s) 296
TatI WGTACW 2 cut(s) 452, 1593
TauI GCSGC 1 cut(s) 978
TscAI CASTG 5 cut(s) 1332, 1372, 2592, 2885, 2893
TseFI GTSAC 1 cut(s) 737
TseI GCWGC 6 cut(s) 106, 134, 1415, 2418, 2729, 3179
Tsp45I GTSAC 1 cut(s) 737
TspGWI ACGGA 2 cut(s) 308, 1145
TspMI CCCGGG 1 cut(s) 3101
TspRI CASTG 5 cut(s) 1332, 1372, 2592, 2885, 2893
Van91I CCANNNNNTGG 1 cut(s) 2833
Vha464I CTTAAG 1 cut(s) 127
VpaK11BI GGWCC 3 cut(s) 1812, 2215, 2590
VspI ATTAAT 1 cut(s) 2370
XbaI TCTAGA 1 cut(s) 2935
XceI RCATGY 4 cut(s) 852, 1385, 2306, 3062
XcmI CCANNNNNNNNNTGG 2 cut(s) 2114, 2209
XmaI CCCGGG 1 cut(s) 3101
XmnI GAANNNNTTC 3 cut(s) 522, 573, 3264
Zsp2I ATGCAT 3 cut(s) 1318, 1383, 1395
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.