Rmu_sc0000777.1_g000005

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000777.1
OG0000042
Physical Location & Seq
Reverse (-)
25380 .. 32623
7244 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000777.1_g000005.1.cds

Sequence Viewer

Length: 5505 bp
atggcatttcttattgaaattggtactacaattgtcgcaaagctagctgaatacatggttgaaccagttatacgccaagcgggttatataatcagctacaacaagaacctcaaaaaactacataatcaagtcggtgacttagttgaagctagaataagcatgcagcatgctgttgaaacagaagaaagaaaaggtaaaaaaattgagaaaggggtccagaactggctgattgaagtggatcagctgactaaagaagcagatgacttcttcaaagatgaacaccatgcagagaccaagtgtctacagggcttttgtcctaatctaaagcttcgtcatcatctaagcaggaaatcaacaaaaatggctcaagaggtggctgagctttatgagaaaaagaagaactttgacaatattacatatgttgcttcccaagaagaggtgtgtgtagcagctctccaggattatgaggcctttgattcaaggacttcagttgcgaaggatgtaatcaacgaattgaaaaattctaatacctacatgattggggtgtacggtattgggggtgtgggaaaaacaacacttgtcaaagaagtttttaagcaattagctacaggaggtgagaagctgtttgatgaggtagttatggtactcgatctgaaaaagaatcccagcatcgatagaattcaaaaagaaattgctgagaagttaggtctcgagattctcgaaactgagaccttagctggaagagcacgtcgaatatataacaggatcaaagacaagaagtctcttgtgatcctagatgatgtttgggaaaacatcgattttgggtatgtgggtcttcctcgaatggaaactcttaaaatactgttgacttctcgaagcaaactagtattatcttccgatatgggtacagaaaaggagtttcctctcgaagttttagacaaagatgaagcttggagtttatttcagaagacggcaggtgatattgttaaaaatctcaatattggaactatagccacccaagtagctgaaaagtgtggaggtttgccacttttgattgtcactgttgcaagatccttgagaaatagttcattacaagcatggaaagatactttcagacgcctaaaaaggttggatggaaaaggattgacagagaaaacatactctgctattgagtggagttacaatcaattgggtgatgaggagcttaaatcattgttcttgctgtgtggacgtattatgtcggggtattcgaacactatttatatccttgatctgcttagatatagcatgggtctgagcttgttaaagaaggtgaatacattagaagaagcacggattgcattgtattctctacttgaaaaactcaaagactcttgtctattgctagatggtgatgctaattcaaattgcagaatgcatgatcttgtaggcaatgttgctaattggattatggtcagggatcatcacaccatatcatccacacttgaagatgagttgaaagattggccagataaggactcgcttcaaaaatgcacggcaatatattttccttacacggttatcccccgtcttcctgaagttttggaatgtccagaactgaaaatgtttcttttggggagtagggatgttacattggaaattccatgcaacatttttgaaaagatggaaaaactccaggtacttggtttaggctcattgagttttttgccttcactacctatatctctagagttcctaaagagtcttaaaacattgtgtttaaatcattgcaagttaagagatctatctttagtctggcaacttggaagcttagaatttcttagttttagaggatctgatatcaagcagctgcccaaagaaatagggcaattgactcgtctacgcttgttggatttgaatggctgctttcaacttgaatttattccacctaatgttctatcaaggttgacaagattagaagatttgataatgggaaatagttttaacagatgggaggctgaaggagtcatcagtactgaaaaaagtaatgcaagccttgaagagctaaagcacttgcctcagctaactgcattacagctacatatcccagatgatgttattcttccagtagatttgttcgccactaaattggagagattccaaatatgtattggttctgcgtggaaatgggctaatgtcgatgaaaccctcaatgcactaaagctcaaattcaccactagcaatgaattggaccaaggtttaaaaacgctactcaggagaaccgaagacttgtatttggagggcatggagggtgttaatagtagtattttatatgaaataggtactgaaggttttcaacaactgaaacattttcatgtccaaaacaatgctaattttgcatacatcatcaatggcaaggttggttttcccaacttaacatggttggaggtgagtggactcaatgatttaagattcttgttctcatcttcaactgctagaagtcttctacaactcaaacgtcttcagatatcgggatgtcaaatcatggaagcaatagtatcaatagaagaatttaatgagattgcagagaaactgctttgccaactacaagatttggagctaaaagaccttccaaggctcactaaattctgctcaagaaagtatactgaattttcaaatccatcctctggtagactgcaattggaggactgtattaaaagaaatacaattggtgaagaaattgaagagataaactcaactagaaaccttgacgttgtgatccaacactttctgtttgataacaagatagagtttccaaacttgaaggagttatccattgatggcctagcaaagttgaccacaatatggaacaatcaactttctctagagagttcaaaaaatctagagacaatagaaattgtttcatgtgacaatttgaaaagtatttttccagccacagtggccagaagtcttcaacagttgaggagtctgaaagtccggaattgtggggtagaggaaatcgtctcaaaagaagacagtgtacagacaacacctatgtttgttttttcaaaactaacatatgtgatatttcaaaatttaccccaacttaggagtttctatccagaatcacattcttcgaagtggccatcgctcgaaactttggcggtgtataatatttgtactgaagtgcagacatttgcagagggcaggtgtgagttgaacaatctttgcactccaaataaaaaatctttgtttttacttgagaaggatttattcccaaatttggaaagtttaggcttcgacgtaatagagaactgggatagtccgccactccacctgtttaggaagctcaaatgtctttatagttatgctgacaccaattcatctgtgaattctctagagaaattacttggtcttgaaaaagtcgatgtgagcagtaatggagaagtacgtgctgttgggaatgggaccctcccacatttaagagagttgtacctttacgggatgcggaagctaatgaatcttggggaggatagcttcggaccaacatgcccatattttccaaatctggaaattctgaagctaaaggactgtgacagcttaaagaatttaaaatcatccgcaatatccttcaagaatctaataactttgcaagtaagtagttgtaagggattgaaatacttgatatctttctccatggccaaaagtttgatgcatctcacaaaactagaagtccaggattgtgaggaaatgatagaaatattggggagcaatgacaatgatgattcagaaaatgagattgaattcagggtgttgaaacatttggaactttctgctctaccaagtttaagaggcttttgctcggcgactcgcattgtcaaatttccatacttggaaaatttatccatgaattgtactcaactggagtcgttcatctttgattctatggataaaagtaatacaattggcaaggacatcaaagacaccgactcaagcgaaaaccgtgagattgaagtactgcaaccttttctttttgacaacaaggttgactttccgaggttggagagcttgtctctcaagggtctgacaaagttgatggcaatatggcacagtcaactttctctaaactctttttgtagactcaaagaccttgaagtacatggatgtggaaatttagtaagtatctttgtgcccagtactatggcaagattgaatgttcttgagaccttattgataaaggagtgcaagtctgtacaagatgtatttgaacttggaggaattgatgttagaggaatacatgacacgtcagttgcaactcagctgagatcttgtgactgtcaaaatctagaatcagttgtaattgattcttgtgagaatttgaaaaacattttccctgtttcagtggctagaaatcttcaacagttaacgaggctgatagtgaggaactgtggagtggaggaaatcattacaagagaggagggactacaaacaacacctaagtttgtgtttccaaaagtaacaaaagtgattttttggaatatgtcccaactcacgaatttctacccagggatgcatgtgtccgtctggccatcacttaatgagttgatggtggtacaatgtgctaaagtcaaagtgtttgccgaggaaatctcaaattttcaaggacataatgagtcggaacgtctcattgttcttatcccgcagtctctctttttaattgagaaggattcatttcccaaattggaaaggttgaccatggatgcaatggtgttttggaatggtccactcacagcagtagcgcagttttttagcaaactaaagtttcttgatgttacttgtacggagtccaagtctgttgttttccttgacaaattactcgacccggaaggaaacagtgcagttgggattgggacccaacagcaacagcagctcccacatttaaaagagttgaggcttgttcgaatggagaagctgatgcatctaggcctggatgatgaggaggataactcacaatcagccccccgcatcccaaattttccaaacctgcaaattctattggtgaatgcttgtcacagcttaaggaatcttagatcatccgcaatacccttcaacaatctaacaactttgcaagtaagtgtttgcaagggattgaaatacttgatgacttactccatggccaagagtttaatgcaactcacaaaactggaagtcgagtggtgcctaagactggtggaaatagtgggaagcaatgaagacggcgattcaagaaatgagattacattcaggtggctgaaacatttgaaactattgggtctaccaagactgcaaggcttttgctccggaaattgcattgctaaattcccgtccttggaaacgtcaagcatgagcaaccgcctcaagttgaagattttcacagctcatgaccaaacgctacagctaacaaacgaagaggaagacacagatgtcgatgattgggagaagtggctgactgctaatgataaacagaatttggcaagtactgattga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

1834

Amino Acids

208.39

Weight (kDa)

5.62

Isoelectric Point (pI)

43.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 965, 3177
AasI GACNNNNNNGTC 1 cut(s) 5441
Acc36I ACCTGC 3 cut(s) 965, 3177, 5031
AccB1I GGYRCC 1 cut(s) 5196
AccB7I CCANNNNNTGG 2 cut(s) 2666, 2844
AccI GTMKAC 6 cut(s) 301, 1879, 2642, 2671, 4117, 5293
AccIII TCCGGA 2 cut(s) 2976, 5318
AciI CCGC 9 cut(s) 80, 3143, 3305, 3487, 3600, 4679, 5002, 5076, 5371
AclWI GGATC 7 cut(s) 246, 773, 784, 1065, 1467, 1840, 2752
AcoI YGGCCR 6 cut(s) 1505, 2940, 3122, 3678, 4565, 5154
AcuI CTGAAG 7 cut(s) 471, 1596, 2019, 2346, 2486, 3183, 3578
AcyI GRCGYC 1 cut(s) 1117
AfiI CCNNNNNNNGG 7 cut(s) 436, 2666, 2844, 3087, 3262, 5206, 5347
AflII CTTAAG 1 cut(s) 5056
AflIII ACRYGT 1 cut(s) 4281
AhdI GACNNNNNGTC 2 cut(s) 297, 778
AhlI ACTAGT 1 cut(s) 883
AjiI CACGTC 2 cut(s) 749, 4284
AjnI CCWGG 5 cut(s) 456, 1674, 3714, 4543, 4965
Alw21I GWGCWC 1 cut(s) 748
AlwI GGATC 7 cut(s) 246, 773, 784, 1065, 1467, 1840, 2752
Ama87I CYCGRG 1 cut(s) 710
Aor13HI TCCGGA 2 cut(s) 2976, 5318
AoxI GGCC 9 cut(s) 468, 1505, 2821, 2940, 3122, 3678, 4565, 4963, 5154
ApeKI GCWGC 6 cut(s) 163, 449, 1846, 1849, 1902, 4906
Asp700I GAANNNNTTC 4 cut(s) 1084, 1920, 2331, 5387
AspLEI GCGC 1 cut(s) 4780
AspS9I GGNCC 6 cut(s) 214, 2230, 3447, 3521, 4760, 4890
AsuC2I CCSGG 1 cut(s) 4862
AsuII TTCGAA 3 cut(s) 1250, 3116, 4939
AsuNHI GCTAGC 1 cut(s) 43
AvaI CYCGRG 1 cut(s) 710
AvaII GGWCC 6 cut(s) 214, 2230, 3447, 3521, 4760, 4890
BaeGI GKGCMC 1 cut(s) 4173
BalI TGGCCA 6 cut(s) 1507, 2942, 3124, 3680, 4567, 5156
BanI GGYRCC 1 cut(s) 5196
BarI GAAGNNNNNNTAC 2 cut(s) 3003, 3035
Bbv12I GWGCWC 1 cut(s) 748
BbvCI CCTCAGC 1 cut(s) 2058
BbvI GCAGC 6 cut(s) 175, 461, 1836, 1858, 1889, 4918
BceAI ACGGC 3 cut(s) 987, 1551, 5251
BcgI CGANNNNNNTGC 2 cut(s) 1856, 1890
BciT130I CCWGG 5 cut(s) 458, 1676, 3716, 4545, 4967
BcnI CCSGG 1 cut(s) 4862
BcuI ACTAGT 1 cut(s) 883
BfmI CTRYAG 4 cut(s) 302, 606, 1008, 5411
BfrI CTTAAG 1 cut(s) 5056
BfuAI ACCTGC 3 cut(s) 965, 3177, 5031
BglI GCCNNNNNGGC 1 cut(s) 2939
BglII AGATCT 2 cut(s) 1780, 4304
BisI GCNGC 6 cut(s) 164, 450, 1847, 1850, 1903, 4907
BlpI GCTNAGC 1 cut(s) 378
BlsI GCNGC 6 cut(s) 165, 451, 1848, 1851, 1904, 4908
BmcAI AGTACT 4 cut(s) 2014, 3996, 4177, 5497
Bme1390I CCNGG 6 cut(s) 458, 1676, 3716, 4545, 4862, 4967
Bme18I GGWCC 6 cut(s) 214, 2230, 3447, 3521, 4760, 4890
BmeRI GACNNNNNGTC 2 cut(s) 297, 778
BmeT110I CYCGRG 1 cut(s) 710
BmgBI CACGTC 2 cut(s) 749, 4284
BmgT120I GGNCC 6 cut(s) 214, 2230, 3447, 3521, 4760, 4890
BmiI GGNNCC 6 cut(s) 215, 3448, 3449, 4891, 4892, 5198
BmrFI CCNGG 6 cut(s) 458, 1676, 3716, 4545, 4862, 4967
BmrI ACTGGG 2 cut(s) 3304, 4167
BmtI GCTAGC 1 cut(s) 47
BmuI ACTGGG 2 cut(s) 3304, 4167
BoxI GACNNNNGTC 1 cut(s) 1374
BplI GAGNNNNNCTC 8 cut(s) 2717, 2749, 4036, 4068, 4613, 4645, 4970, 5002
BpmI CTGGAG 3 cut(s) 440, 1658, 3923
Bpu10I CCTNAGC 2 cut(s) 733, 2058
Bpu1102I GCTNAGC 1 cut(s) 378
Bpu14I TTCGAA 3 cut(s) 1250, 3116, 4939
BpuEI CTTGAG 8 cut(s) 351, 1096, 2617, 3260, 3955, 4040, 4220, 5360
BpuMI CCSGG 1 cut(s) 4862
Bsa29I ATCGAT 2 cut(s) 672, 816
BsaAI YACGTR 1 cut(s) 3431
BsaHI GRCGYC 1 cut(s) 1117
BsaI GGTCTC 4 cut(s) 284, 713, 722, 4196
BsaWI WCCGGW 2 cut(s) 2976, 5318
BsaXI ACNNNNNCTCC 8 cut(s) 4034, 4064, 4211, 4241, 4814, 4844, 4893, 4923
Bsc4I CCNNNNNNNGG 7 cut(s) 436, 2666, 2844, 3087, 3262, 5206, 5347
Bse1I ACTGG 8 cut(s) 65, 227, 2105, 3299, 3906, 4173, 5187, 5211
Bse3DI GCAATG 7 cut(s) 1438, 1765, 2227, 3757, 4749, 5233, 5328
BseAI TCCGGA 2 cut(s) 2976, 5318
BseBI CCWGG 5 cut(s) 458, 1676, 3716, 4545, 4967
BseCI ATCGAT 2 cut(s) 672, 816
BseLI CCNNNNNNNGG 7 cut(s) 436, 2666, 2844, 3087, 3262, 5206, 5347
BseMI GCAATG 7 cut(s) 1438, 1765, 2227, 3757, 4749, 5233, 5328
BseMII CTCAG 8 cut(s) 369, 687, 717, 1286, 2072, 2266, 4292, 4310
BseNI ACTGG 8 cut(s) 65, 227, 2105, 3299, 3906, 4173, 5187, 5211
BseRI GAGGAG 4 cut(s) 1214, 2977, 4469, 4991
BseSI GKGCMC 1 cut(s) 4173
BseXI GCAGC 6 cut(s) 175, 461, 1836, 1858, 1889, 4918
BseYI CCCAGC 1 cut(s) 665
BsgI GTGCAG 2 cut(s) 3188, 4896
BshFI GGCC 9 cut(s) 470, 1507, 2823, 2942, 3124, 3680, 4567, 4965, 5156
BshNI GGYRCC 1 cut(s) 5196
BshVI ATCGAT 2 cut(s) 672, 816
BsiHKAI GWGCWC 1 cut(s) 748
BsiHKCI CYCGRG 1 cut(s) 710
BsiSI CCGG 3 cut(s) 2977, 4862, 5319
BslFI GGGAC 4 cut(s) 3460, 4473, 4507, 4903
BslI CCNNNNNNNGG 7 cut(s) 436, 2666, 2844, 3087, 3262, 5206, 5347
BsmBI CGTCTC 2 cut(s) 3007, 4667
BsmFI GGGAC 4 cut(s) 3460, 4473, 4507, 4903
BsmI GAATGC 2 cut(s) 1419, 5047
BsnI GGCC 9 cut(s) 470, 1507, 2823, 2942, 3124, 3680, 4567, 4965, 5156
Bso31I GGTCTC 4 cut(s) 284, 713, 722, 4196
BsoBI CYCGRG 1 cut(s) 710
Bsp119I TTCGAA 3 cut(s) 1250, 3116, 4939
Bsp1286I GDGCHC 2 cut(s) 748, 4173
Bsp13I TCCGGA 2 cut(s) 2976, 5318
Bsp1407I TGTACA 2 cut(s) 3019, 4231
Bsp1720I GCTNAGC 1 cut(s) 378
Bsp19I CCATGG 3 cut(s) 3675, 4734, 5151
BspACI CCGC 9 cut(s) 80, 3143, 3305, 3487, 3600, 4679, 5002, 5076, 5371
BspANI GGCC 9 cut(s) 470, 1507, 2823, 2942, 3124, 3680, 4567, 4965, 5156
BspCNI CTCAG 8 cut(s) 370, 688, 718, 1287, 2071, 2265, 4293, 4309
BspDI ATCGAT 2 cut(s) 672, 816
BspEI TCCGGA 2 cut(s) 2976, 5318
BspHI TCATGA 1 cut(s) 5398
BspLI GGNNCC 6 cut(s) 215, 3448, 3449, 4891, 4892, 5198
BspMI ACCTGC 3 cut(s) 965, 3177, 5031
BspOI GCTAGC 1 cut(s) 47
BspPI GGATC 7 cut(s) 246, 773, 784, 1065, 1467, 1840, 2752
BspQI GCTCTTC 2 cut(s) 736, 2034
BspT104I TTCGAA 3 cut(s) 1250, 3116, 4939
BspT107I GGYRCC 1 cut(s) 5196
BspTI CTTAAG 1 cut(s) 5056
BspTNI GGTCTC 4 cut(s) 284, 713, 722, 4196
BsrDI GCAATG 7 cut(s) 1438, 1765, 2227, 3757, 4749, 5233, 5328
BsrGI TGTACA 2 cut(s) 3019, 4231
BsrI ACTGG 8 cut(s) 65, 227, 2105, 3299, 3906, 4173, 5187, 5211
BssNAI GTATAC 1 cut(s) 2643
BssNI GRCGYC 1 cut(s) 1117
BssT1I CCWWGG 6 cut(s) 2233, 2612, 3675, 4734, 5151, 5346
Bst1107I GTATAC 1 cut(s) 2643
Bst2UI CCWGG 5 cut(s) 458, 1676, 3716, 4545, 4967
Bst6I CTCTTC 5 cut(s) 429, 736, 2034, 2718, 5421
BstACI GRCGYC 1 cut(s) 1117
BstAFI CTTAAG 1 cut(s) 5056
BstAPI GCANNNNNTGC 1 cut(s) 1337
BstAUI TGTACA 2 cut(s) 3019, 4231
BstBAI YACGTR 1 cut(s) 3431
BstBI TTCGAA 3 cut(s) 1250, 3116, 4939
BstC8I GCNNGC 4 cut(s) 45, 161, 168, 2032
BstDSI CCRYGG 3 cut(s) 3675, 4734, 5151
BstHHI GCGC 1 cut(s) 4780
BstMWI GCNNNNNNNGC 6 cut(s) 44, 743, 1337, 2375, 2939, 4906
BstNI CCWGG 5 cut(s) 458, 1676, 3716, 4545, 4967
BstNSI RCATGY 4 cut(s) 163, 170, 3531, 4556
BstPAI GACNNNNGTC 1 cut(s) 1374
BstSCI CCNGG 6 cut(s) 456, 1674, 3714, 4543, 4860, 4965
BstSFI CTRYAG 4 cut(s) 302, 606, 1008, 5411
BstSLI GKGCMC 1 cut(s) 4173
BstV1I GCAGC 6 cut(s) 175, 461, 1836, 1858, 1889, 4918
BstX2I RGATCY 4 cut(s) 1070, 1780, 1832, 4304
BstXI CCANNNNNNTGG 3 cut(s) 1682, 2128, 4180
BstYI RGATCY 4 cut(s) 1070, 1780, 1832, 4304
BstZ17I GTATAC 1 cut(s) 2643
Bsu15I ATCGAT 2 cut(s) 672, 816
BsuRI GGCC 9 cut(s) 470, 1507, 2823, 2942, 3124, 3680, 4567, 4965, 5156
BsuTUI ATCGAT 2 cut(s) 672, 816
BtgI CCRYGG 3 cut(s) 3675, 4734, 5151
BtgZI GCGATG 1 cut(s) 3111
BtrI CACGTC 2 cut(s) 749, 4284
BtsIMutI CAGTG 5 cut(s) 1059, 2943, 3022, 4386, 4879
BveI ACCTGC 3 cut(s) 965, 3177, 5031
Cac8I GCNNGC 4 cut(s) 45, 161, 168, 2032
CciI TCATGA 1 cut(s) 5398
CfoI GCGC 1 cut(s) 4780
Cfr13I GGNCC 6 cut(s) 214, 2230, 3447, 3521, 4760, 4890
ClaI ATCGAT 2 cut(s) 672, 816
CseI GACGC 1 cut(s) 1125
DraI TTTAAA 4 cut(s) 1761, 2241, 3591, 4920
DrdI GACNNNNNNGTC 1 cut(s) 5441
DriI GACNNNNNGTC 2 cut(s) 297, 778
DseDI GACNNNNNNGTC 1 cut(s) 5441
EaeI YGGCCR 6 cut(s) 1505, 2940, 3122, 3678, 4565, 5154
Eam1104I CTCTTC 5 cut(s) 429, 736, 2034, 2718, 5421
Eam1105I GACNNNNNGTC 2 cut(s) 297, 778
EarI CTCTTC 5 cut(s) 429, 736, 2034, 2718, 5421
EciI GGCGGA 1 cut(s) 3294
Eco130I CCWWGG 6 cut(s) 2233, 2612, 3675, 4734, 5151, 5346
Eco147I AGGCCT 2 cut(s) 470, 4965
Eco31I GGTCTC 4 cut(s) 284, 713, 722, 4196
Eco32I GATATC 3 cut(s) 1840, 2508, 3666
Eco47I GGWCC 6 cut(s) 214, 2230, 3447, 3521, 4760, 4890
Eco57I CTGAAG 7 cut(s) 471, 1596, 2019, 2346, 2486, 3183, 3578
Eco88I CYCGRG 1 cut(s) 710
EcoO109I RGGNCCY 2 cut(s) 3447, 4890
EcoRI GAATTC 3 cut(s) 678, 3370, 3782
EcoRII CCWGG 5 cut(s) 456, 1674, 3714, 4543, 4965
EcoRV GATATC 3 cut(s) 1840, 2508, 3666
EcoT14I CCWWGG 6 cut(s) 2233, 2612, 3675, 4734, 5151, 5346
EcoT22I ATGCAT 4 cut(s) 1419, 3696, 4554, 4959
ErhI CCWWGG 6 cut(s) 2233, 2612, 3675, 4734, 5151, 5346
Esp3I CGTCTC 2 cut(s) 3007, 4667
FalI AAGNNNNNCTT 4 cut(s) 386, 418, 4013, 4045
FaqI GGGAC 4 cut(s) 3460, 4473, 4507, 4903
FauI CCCGC 3 cut(s) 73, 4686, 5009
FauNDI CATATG 2 cut(s) 418, 3058
FblI GTMKAC 6 cut(s) 301, 1879, 2642, 2671, 4117, 5293
Fnu4HI GCNGC 6 cut(s) 164, 450, 1847, 1850, 1903, 4907
Fsp4HI GCNGC 6 cut(s) 164, 450, 1847, 1850, 1903, 4907
GlaI GCGC 1 cut(s) 4779
GluI GCNGC 6 cut(s) 164, 450, 1847, 1850, 1903, 4907
GsaI CCCAGC 1 cut(s) 669
GsuI CTGGAG 3 cut(s) 440, 1658, 3923
HaeIII GGCC 9 cut(s) 470, 1507, 2823, 2942, 3124, 3680, 4567, 4965, 5156
HapII CCGG 3 cut(s) 2977, 4862, 5319
HgaI GACGC 1 cut(s) 1125
HhaI GCGC 1 cut(s) 4780
Hin1I GRCGYC 1 cut(s) 1117
Hin6I GCGC 1 cut(s) 4778
HinP1I GCGC 1 cut(s) 4778
HincII GTYRAC 7 cut(s) 867, 1947, 2835, 4027, 4094, 4404, 4731
HindII GTYRAC 7 cut(s) 867, 1947, 2835, 4027, 4094, 4404, 4731
HindIII AAGCTT 3 cut(s) 326, 948, 1807
HpaI GTTAAC 1 cut(s) 4404
HpaII CCGG 3 cut(s) 2977, 4862, 5319
Hpy99I CGWCG 2 cut(s) 753, 3284
HpyCH4IV ACGT 9 cut(s) 748, 1231, 2497, 2751, 3282, 3430, 4283, 4660, 5354
HpyF10VI GCNNNNNNNGC 6 cut(s) 44, 743, 1337, 2375, 2939, 4906
HpySE526I ACGT 9 cut(s) 748, 1231, 2497, 2751, 3282, 3430, 4283, 4660, 5354
Hsp92I GRCGYC 1 cut(s) 1117
HspAI GCGC 1 cut(s) 4778
KflI GGGWCCC 2 cut(s) 3447, 4890
Kpn2I TCCGGA 2 cut(s) 2976, 5318
KspAI GTTAAC 1 cut(s) 4404
LguI GCTCTTC 2 cut(s) 736, 2034
LmnI GCTCC 5 cut(s) 1201, 2596, 3747, 4914, 5321
Lsp1109I GCAGC 6 cut(s) 175, 461, 1836, 1858, 1889, 4918
MaeII ACGT 9 cut(s) 748, 1231, 2497, 2751, 3282, 3430, 4283, 4660, 5354
MfeI CAATTG 6 cut(s) 30, 1187, 1868, 2678, 2706, 3942
MflI RGATCY 4 cut(s) 1070, 1780, 1832, 4304
MhlI GDGCHC 2 cut(s) 748, 4173
MlsI TGGCCA 6 cut(s) 1507, 2942, 3124, 3680, 4567, 5156
MluNI TGGCCA 6 cut(s) 1507, 2942, 3124, 3680, 4567, 5156
MmeI TCCRAC 6 cut(s) 1110, 1869, 2403, 2785, 4020, 4635
Mox20I TGGCCA 6 cut(s) 1507, 2942, 3124, 3680, 4567, 5156
Mph1103I ATGCAT 4 cut(s) 1419, 3696, 4554, 4959
MroI TCCGGA 2 cut(s) 2976, 5318
MroXI GAANNNNTTC 4 cut(s) 1084, 1920, 2331, 5387
MscI TGGCCA 6 cut(s) 1507, 2942, 3124, 3680, 4567, 5156
MslI CAYNNNNRTG 3 cut(s) 2352, 4143, 5263
Msp20I TGGCCA 6 cut(s) 1507, 2942, 3124, 3680, 4567, 5156
MspA1I CMGCKG 3 cut(s) 244, 1849, 4300
MspCI CTTAAG 1 cut(s) 5056
MspI CCGG 3 cut(s) 2977, 4862, 5319
MspR9I CCNGG 6 cut(s) 458, 1676, 3716, 4545, 4862, 4967
MunI CAATTG 6 cut(s) 30, 1187, 1868, 2678, 2706, 3942
Mva1269I GAATGC 2 cut(s) 1419, 5047
MvaI CCWGG 5 cut(s) 458, 1676, 3716, 4545, 4967
MwoI GCNNNNNNNGC 6 cut(s) 44, 743, 1337, 2375, 2939, 4906
NciI CCSGG 1 cut(s) 4862
NcoI CCATGG 3 cut(s) 3675, 4734, 5151
NdeI CATATG 2 cut(s) 418, 3058
NheI GCTAGC 1 cut(s) 43
NlaIV GGNNCC 6 cut(s) 215, 3448, 3449, 4891, 4892, 5198
NmeAIII GCCGAG 2 cut(s) 3821, 4645
NmuCI GTSAC 6 cut(s) 134, 1057, 2906, 3572, 4310, 5048
NsiI ATGCAT 4 cut(s) 1419, 3696, 4554, 4959
NspI RCATGY 4 cut(s) 163, 170, 3531, 4556
NspV TTCGAA 3 cut(s) 1250, 3116, 4939
PaeI GCATGC 2 cut(s) 163, 170
PaeR7I CTCGAG 1 cut(s) 710
PagI TCATGA 1 cut(s) 5398
PaqCI CACCTGC 2 cut(s) 965, 3177
PasI CCCWGGG 1 cut(s) 4544
PceI AGGCCT 2 cut(s) 470, 4965
PciSI GCTCTTC 2 cut(s) 736, 2034
PcsI WCGNNNNNNNCGW 2 cut(s) 717, 1247
PctI GAATGC 2 cut(s) 1419, 5047
PdmI GAANNNNTTC 4 cut(s) 1084, 1920, 2331, 5387
PflMI CCANNNNNTGG 2 cut(s) 2666, 2844
PfoI TCCNGGA 2 cut(s) 456, 3714
PkrI GCNGC 6 cut(s) 165, 451, 1848, 1851, 1904, 4908
Ppu21I YACGTR 1 cut(s) 3431
PpuMI RGGWCCY 2 cut(s) 3447, 4890
PshAI GACNNNNGTC 1 cut(s) 1374
Psp5II RGGWCCY 2 cut(s) 3447, 4890
Psp6I CCWGG 5 cut(s) 456, 1674, 3714, 4543, 4965
PspFI CCCAGC 1 cut(s) 665
PspGI CCWGG 5 cut(s) 456, 1674, 3714, 4543, 4965
PspN4I GGNNCC 6 cut(s) 215, 3448, 3449, 4891, 4892, 5198
PspPI GGNCC 6 cut(s) 214, 2230, 3447, 3521, 4760, 4890
PspPPI RGGWCCY 2 cut(s) 3447, 4890
PsrI GAACNNNNNNTAC 2 cut(s) 54, 86
PsuI RGATCY 4 cut(s) 1070, 1780, 1832, 4304
PvuII CAGCTG 3 cut(s) 244, 1849, 4300
RseI CAYNNNNRTG 3 cut(s) 2352, 4143, 5263
SapI GCTCTTC 2 cut(s) 736, 2034
SatI GCNGC 6 cut(s) 164, 450, 1847, 1850, 1903, 4907
Sau96I GGNCC 6 cut(s) 214, 2230, 3447, 3521, 4760, 4890
ScaI AGTACT 4 cut(s) 2014, 3996, 4177, 5497
ScrFI CCNGG 6 cut(s) 458, 1676, 3716, 4545, 4862, 4967
SduI GDGCHC 2 cut(s) 748, 4173
SfcI CTRYAG 4 cut(s) 302, 606, 1008, 5411
Sfr274I CTCGAG 1 cut(s) 710
SfuI TTCGAA 3 cut(s) 1250, 3116, 4939
SinI GGWCC 6 cut(s) 214, 2230, 3447, 3521, 4760, 4890
SlaI CTCGAG 1 cut(s) 710
SmiMI CAYNNNNRTG 3 cut(s) 2352, 4143, 5263
SpeI ACTAGT 1 cut(s) 883
SphI GCATGC 2 cut(s) 163, 170
SseBI AGGCCT 2 cut(s) 470, 4965
SsiI CCGC 9 cut(s) 80, 3143, 3305, 3487, 3600, 4679, 5002, 5076, 5371
SspI AATATT 4 cut(s) 412, 1000, 3154, 3741
StuI AGGCCT 2 cut(s) 470, 4965
StyD4I CCNGG 6 cut(s) 456, 1674, 3714, 4543, 4860, 4965
StyI CCWWGG 6 cut(s) 2233, 2612, 3675, 4734, 5151, 5346
TaiI ACGT 9 cut(s) 751, 1234, 2500, 2754, 3285, 3433, 4286, 4663, 5357
TatI WGTACW 9 cut(s) 2012, 3019, 3158, 3893, 3994, 4135, 4175, 4231, 5495
TscAI CASTG 5 cut(s) 1066, 2943, 3022, 4386, 4879
TseFI GTSAC 6 cut(s) 134, 1057, 2906, 3572, 4310, 5048
TseI GCWGC 6 cut(s) 163, 449, 1846, 1849, 1902, 4906
Tsp45I GTSAC 6 cut(s) 134, 1057, 2906, 3572, 4310, 5048
TspGWI ACGGA 3 cut(s) 1348, 4549, 4835
TspRI CASTG 5 cut(s) 1066, 2943, 3022, 4386, 4879
Van91I CCANNNNNTGG 2 cut(s) 2666, 2844
Vha464I CTTAAG 1 cut(s) 5056
VpaK11BI GGWCC 6 cut(s) 214, 2230, 3447, 3521, 4760, 4890
XbaI TCTAGA 5 cut(s) 1726, 2863, 2881, 3376, 4324
XceI RCATGY 4 cut(s) 163, 170, 3531, 4556
XcmI CCANNNNNNNNNTGG 2 cut(s) 2147, 4741
XhoI CTCGAG 1 cut(s) 710
XmiI GTMKAC 6 cut(s) 301, 1879, 2642, 2671, 4117, 5293
XmnI GAANNNNTTC 4 cut(s) 1084, 1920, 2331, 5387
ZrmI AGTACT 4 cut(s) 2014, 3996, 4177, 5497
Zsp2I ATGCAT 4 cut(s) 1419, 3696, 4554, 4959
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.