Rw4G006750

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
Physical Location & Seq
Reverse (-)
14153335 .. 14175615
22281 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G006750.1

Sequence Viewer

Length: 3630 bp
ATGGGATGTCTAACTGCTATTGGAATTATTGGAAAGATTGCTGAGTTTACAGTTGCACCAGTTGGACGCCAGGTGGGTTATGTATTCCACTACAACAGGAACCTTAGTAAACTACAGAGTCAAGTTACCAACTTAGAAGCTGCAAGAGAAAGTTTGGAGCACAAGATTGTTGAAGAAGAAAGAGCTGGACGAAAAGTGGAAACTTTTGTAAACAATTGGCTGACAGATGTGAATAGGATCATTGGACAGGCCAAAGATTTATTAAAAGATGAACATCAAGCAAAGATAAAGTGTATGTATGGATTTTGTCCTAACCTGATGGCTCGTCATCATCTAAGCAGGAAATCAACAAAACTGGTTCAAGATGTTGCTGATCTCTATGGGAAAAAGGACTTTTCCAATATTGCATACGATGTTACACCGGAAGAGGTATGTGTAATATCTACCAAAAATTATCAAGCCTTTGATTCAAGGACTTCAGTTGCTAAGCTGATCATAGATGAACTAAGAAGTTCTAATACATATATGATTGGGGTGTATGGTATTGGGGGTGTGGGGAAGACAACACTTGTCAAAGAAGTTTATAGGCAAGTCACAAAAGATAAAACATTATTTGATGATGTGGTTATGGTATTGGATGTCAAGCAGAATCCAAGCATCAGAAGAATTCAAAATGAAATTGCTGAGAAGTTAGGTCTCAAATTTCATGAAATTGAGACTCTAGCTGGAAGAGCGCGTCTTCTATGTAACAGGTTAAAAGACAAGAAATCTCTTGTAATTTTAGATGATGTTTGGGAAAACATTGATTTCGAGAATGTGGGTCTTCCTTGCATGGCAACTCTCAAAATATTGTTGTCTTCTCGAAGTAAACTAGTATTGACTTCAGGCATGGGTACACAAAAAGAGTTTCCTCTACATGTTTTAGACAAAGACGAAACTTGGAGTTTATTTAAGAAGATGGCCGGTGATATTGTTGAAAATTCTGACATACAGATTGTAGCTACCCAAGTAGCTGAAAAATGTGGCGGTTTGCCCCTTTTGATTGTCACCGTTGCAAGAGCTCTAAAAAATAGTGGATTGCAAGCATGGAAAGATACTCTCAGACGCCTAAAAAGGTTTGATGGACAAGGATTGACAGAAAAAACATATTCTGCTATTAAGTGGAGTTATAATAAATTGGATGATGAGGAGCTCAAGTCATTGTTCATGCTTTGTGGAGTTGTGGTTGGTACCGCCAACACTTTTAATATCGTTGACTTGTGGAAATATAGTATGGGTTTGGGTTTGTTAAAAGATTTTGATACAATAGGAGAGGCAAGGGATGCATTATGTTCGATGATTGAACAACTCAAAGACTGTTGTCTATTGCTAGAGAGTGATGATAATACGCTTGTTAGAATGCATGATCTTGTAAAAGATGTTGCTAAAAAGATTGCTTCTAGAGAGCAACACGTCTTATCAGTATCTCTTGGGAATGAGTTGCGAGAATGGCCAGATAATGAATTTTGGGAAAAGTGCATTATGATCTTTCTAGACCAATGTAAAATCCCCGAGTTTCCTGAAGTTTTGCACTGCCAACAACTGACACTGTTTCATTTAGATAATGAAGTCCGGGAAATCCCATGCAATCTTTTTAAAGAGATGAAAAAACTCAAAGTGTTGGATTTAACTAGCTTGACTATCCCGTTGCTGCCTTCATCTCTTGAATTCCTAGAAAGTCTCCGGACGTTGTGTTTGGATCATTGCACATTGGGAGATGTAACTCTGATCGGACAGCTACGAAACTTGGAAATACTCAGCTTTTTGAAGTCCAAATTCAAAGAGTTGCCCAAAGAAATTGGGCAATTGACACGTCTGCGATTGTTGGATTTGACTGGTTTCTCTCAACTCGAAGTGATTTCACCTAATGTTATAGCAAGCTTGAAAAGATTAGAGTACTTGCGAATGAGAAAAAGTTTTAACCGGTGGGAGGCTGGAGGAGCCATCAGCATAGAAAGAAGTAATGCAAACCTTGAAGAGCTCAAGCACTTGCCTTACCTGACCGCATTACAACTACATATCCCAAATGCCAACATTCTTCCACCAGATTTATTCACTGGTTGTAAGTTAGAGAGATTCCAAATATGTATTGGCTCTGTGTGGAAATGGGATGATGTGGATGAAGCCATCAATGCACTAAAGCTCCACCTCACTGCCAGCAATCAATTTGACCAAGGACTAGAAATGTTGGTAAAGAGAACTAAAGACTTGTACTTGGAGGGTGTTTATAGCAGTATCATGAATCAACTAGGTGTTGAAGCTTCTCACAAACTGGAGCATCTCCATGTCCAAAACAATTTTGAATTTACCAACTTTTTGTCTATCATAAACGGGAAGGTTAGGTATCCCAACTTATCATGGTTGGAGGTGAATGAACTCAATGGTTTAAGATTCTTGTTATCATGTTCAATGGTTAGAAGCCTTGCACAACTCGAACGTCTTCAGATATCAGGATGTCATATAATGGAAGAGATAGTATCACTAGAAGAATCTAATGAAGAAATTGTAGACAACTTCTTTTGCCAGCTACAAACTCTGGAGCTAAAAGACCTTCCAAATCTCACTAAATTATGCTCAAGAAACTATACTGAACTTTCAAATCCATCCTCTGGGATACAAGGCTTTCTTTTTGACAATAAGGTAGAGTTTCCAAACTTGAAAAAGTTATCCATTGATGGCCTAGCAAAGTTGATGACAATATGGAACAGTCAACTTGCTCCAGAGAGTACAAAAAATCTAGAGACAATTGAAATTGTTTCGTGTGACAGTTTGAGAAGTATTTTTCCGGTTTCAGTGGCTAGAAATCTCCAACAATTAGAAAGGCTGATAGTGAAGAGTTGTGGAGTTCAGGAAATTGTGGCAAAGGAAGAGTCACTACAAACAACACCTAAGTTTGTGTTTCCAAAAGTAACAGAAGTGATTTTTAGTGATATGTCACTACTCAAGAATTTCTACCCAGGAATGCATGTGTCCAGTTGGCCGTCACTTAATGAGTTGACGGTGGTAAATTGTGCTAAGGTCAACGTGTTTGCCAAGGAAATCTCAAGTTTTCAAGGACATAATGAGGCGAAACGTCTCAGTTTTCTTATCTCGCAATCTCTCTTTTTAATTGAGAAGGATTCATTTCCCAACTTGGAATGGTTGTACGTGAGAGCAATGGAGTTTCCGAATGGTCCACTCCCAGCAGCAGGGCAGTTGTTTAGCAAACTAAAGCATCTTGAGGTTTGTTGTCCGGAGTCCAAGTCAGTTGTTTTCCTTGACAAATTACTAAACTCAGAAGGAAACAACAATAATAGTAGTGCAGTTGGGATTGGGACCCAGCAGCAGCAGCAGCTCCCACATTTAAAAGAGTTGAGTCTTCTTAAAATGGAGAAGCTGATGCATCTAGGCCAAGAGGATGAAGAGGATAACTCACAGTCGGCCCCCCGCATCCCAAATTTTCCCAACTTGGAAATTCTATTCTTTGCAAGTAACTGTTTGCTACGGATTGAAATACTTGATAACGTACTCCATGGCCAAGAGTTTAATGCAACTCACAAAACTGGAAGTCGAGTGGTGCCCAAGATTGGTGGAAATAGTAGAAAGCAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1209

Amino Acids

137.05

Weight (kDa)

6.23

Isoelectric Point (pI)

41.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 165 - 322 2e-29 NB-ARC domain
LRR_14 PF23598 590 - 687 2.6e-07 Leucine-rich repeat region
LRR_RPS2 PF23247 795 - 877 9.8e-12 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 895 - 961 4.6e-16 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1170
Acc65I GGTACC 1 cut(s) 1229
AccB1I GGYRCC 2 cut(s) 1229, 3595
AccB7I CCANNNNNTGG 1 cut(s) 2648
AccI GTMKAC 1 cut(s) 2547
AccII CGCG 1 cut(s) 736
AccIII TCCGGA 2 cut(s) 1722, 3271
AciI CCGC 4 cut(s) 1026, 1233, 2043, 3466
AclWI GGATC 2 cut(s) 245, 1746
AcoI YGGCCR 4 cut(s) 960, 1490, 3017, 3553
AcuI CTGAAG 4 cut(s) 462, 867, 1581, 2465
AcyI GRCGYC 2 cut(s) 67, 1105
AfaI GTAC 7 cut(s) 895, 1231, 1937, 2252, 2767, 3185, 3546
AfiI CCNNNNNNNGG 4 cut(s) 1969, 2648, 3227, 3605
AflIII ACRYGT 4 cut(s) 916, 1450, 1850, 3063
AgeI ACCGGT 1 cut(s) 1962
AhlI ACTAGT 1 cut(s) 871
AjiI CACGTC 2 cut(s) 1453, 1853
AjnI CCWGG 2 cut(s) 69, 2995
Alw21I GWGCWC 4 cut(s) 162, 1063, 1194, 2022
Alw26I GTCTC 5 cut(s) 701, 710, 1724, 2774, 3119
AlwI GGATC 2 cut(s) 245, 1746
Ama87I CYCGRG 1 cut(s) 1550
Aor13HI TCCGGA 2 cut(s) 1722, 3271
AoxI GGCC 8 cut(s) 249, 960, 1490, 2716, 3017, 3427, 3459, 3553
ApeKI GCWGC 7 cut(s) 140, 1690, 3224, 3361, 3364, 3367, 3370
ArsI GACNNNNNNTTYG 4 cut(s) 1717, 1749, 2894, 2926
AsiGI ACCGGT 1 cut(s) 1962
Asp700I GAANNNNTTC 1 cut(s) 2478
Asp718I GGTACC 1 cut(s) 1229
AspLEI GCGC 1 cut(s) 736
AspS9I GGNCC 3 cut(s) 3212, 3354, 3460
AsuC2I CCSGG 1 cut(s) 1613
AsuHPI GGTGA 4 cut(s) 977, 1039, 1893, 2419
AvaI CYCGRG 1 cut(s) 1550
AvaII GGWCC 2 cut(s) 3212, 3354
BaeGI GKGCMC 1 cut(s) 3600
BalI TGGCCA 2 cut(s) 1492, 3555
BanI GGYRCC 2 cut(s) 1229, 3595
BanII GRGCYC 3 cut(s) 1063, 1194, 2022
BarI GAAGNNNNNNTAC 4 cut(s) 502, 534, 2898, 2930
BbsI GAAGAC 6 cut(s) 566, 731, 815, 849, 2471, 3389
Bbv12I GWGCWC 4 cut(s) 162, 1063, 1194, 2022
BbvI GCAGC 7 cut(s) 127, 1677, 3236, 3373, 3376, 3379, 3382
BccI CCATC 7 cut(s) 313, 952, 1115, 1991, 2174, 2650, 2708
BceAI ACGGC 1 cut(s) 3004
BcgI CGANNNNNNTGC 2 cut(s) 1314, 1348
BciT130I CCWGG 2 cut(s) 71, 2997
BciVI GTATCC 2 cut(s) 2394, 2646
BclI TGATCA 1 cut(s) 492
BcnI CCSGG 1 cut(s) 1613
BcoDI GTCTC 5 cut(s) 701, 710, 1724, 2774, 3119
BcuI ACTAGT 1 cut(s) 871
BfmI CTRYAG 1 cut(s) 113
BfuI GTATCC 2 cut(s) 2394, 2646
BisI GCNGC 7 cut(s) 141, 1691, 3225, 3362, 3365, 3368, 3371
BlpI GCTNAGC 1 cut(s) 486
BlsI GCNGC 7 cut(s) 142, 1692, 3226, 3363, 3366, 3369, 3372
BmcAI AGTACT 1 cut(s) 1937
Bme1390I CCNGG 3 cut(s) 71, 1613, 2997
Bme18I GGWCC 2 cut(s) 3212, 3354
BmeT110I CYCGRG 1 cut(s) 1550
BmgBI CACGTC 2 cut(s) 1453, 1853
BmgT120I GGNCC 3 cut(s) 3212, 3354, 3460
BmiI GGNNCC 7 cut(s) 101, 1231, 1981, 3355, 3356, 3462, 3597
BmrFI CCNGG 3 cut(s) 71, 1613, 2997
BmsI GCATC 7 cut(s) 666, 1312, 2326, 3262, 3408, 3430, 3477
BoxI GACNNNNGTC 1 cut(s) 1359
BpiI GAAGAC 6 cut(s) 566, 731, 815, 849, 2471, 3389
BplI GAGNNNNNCTC 2 cut(s) 3434, 3466
BpmI CTGGAG 4 cut(s) 1995, 2333, 2597, 2742
Bpu10I CCTNAGC 1 cut(s) 3054
Bpu1102I GCTNAGC 1 cut(s) 486
BpuEI CTTGAG 6 cut(s) 1178, 2006, 2599, 2966, 3067, 3278
BpuMI CCSGG 1 cut(s) 1613
BsaAI YACGTR 1 cut(s) 3187
BsaBI GATNNNNATC 1 cut(s) 273
BsaHI GRCGYC 2 cut(s) 67, 1105
BsaI GGTCTC 1 cut(s) 701
BsaJI CCNNGG 4 cut(s) 2212, 2995, 3072, 3550
BsaWI WCCGGW 5 cut(s) 421, 1722, 1962, 2824, 3271
BsaXI ACNNNNNCTCC 8 cut(s) 1181, 1209, 1211, 1239, 2166, 2196, 3266, 3296
Bsc4I CCNNNNNNNGG 4 cut(s) 1969, 2648, 3227, 3605
Bse118I RCCGGY 2 cut(s) 962, 1962
Bse1I ACTGG 7 cut(s) 59, 360, 1879, 2101, 2316, 3012, 3586
Bse3DI GCAATG 2 cut(s) 1741, 3201
Bse8I GATNNNNATC 1 cut(s) 273
BseAI TCCGGA 2 cut(s) 1722, 3271
BseBI CCWGG 2 cut(s) 71, 2997
BseDI CCNNGG 4 cut(s) 2212, 2995, 3072, 3550
BseJI GATNNNNATC 1 cut(s) 273
BseLI CCNNNNNNNGG 4 cut(s) 1969, 2648, 3227, 3605
BseMI GCAATG 2 cut(s) 1741, 3201
BseMII CTCAG 6 cut(s) 33, 675, 1114, 1810, 3130, 3327
BseNI ACTGG 7 cut(s) 59, 360, 1879, 2101, 2316, 3012, 3586
BseRI GAGGAG 2 cut(s) 1202, 1992
BseSI GKGCMC 1 cut(s) 3600
BseXI GCAGC 7 cut(s) 127, 1677, 3236, 3373, 3376, 3379, 3382
BseYI CCCAGC 2 cut(s) 3220, 3357
BsgI GTGCAG 1 cut(s) 3360
Bsh1236I CGCG 1 cut(s) 736
BshFI GGCC 8 cut(s) 251, 962, 1492, 2718, 3019, 3429, 3461, 3555
BshNI GGYRCC 2 cut(s) 1229, 3595
BshTI ACCGGT 1 cut(s) 1962
BsiHKAI GWGCWC 4 cut(s) 162, 1063, 1194, 2022
BsiHKCI CYCGRG 1 cut(s) 1550
BsiSI CCGG 7 cut(s) 422, 963, 1612, 1723, 1963, 2825, 3272
BslFI GGGAC 1 cut(s) 3367
BslI CCNNNNNNNGG 4 cut(s) 1969, 2648, 3227, 3605
BsmAI GTCTC 5 cut(s) 701, 710, 1724, 2774, 3119
BsmBI CGTCTC 1 cut(s) 3119
BsmFI GGGAC 1 cut(s) 3367
BsmI GAATGC 2 cut(s) 1404, 3006
BsnI GGCC 8 cut(s) 251, 962, 1492, 2718, 3019, 3429, 3461, 3555
Bso31I GGTCTC 1 cut(s) 701
BsoBI CYCGRG 1 cut(s) 1550
Bsp1286I GDGCHC 5 cut(s) 162, 1063, 1194, 2022, 3600
Bsp13I TCCGGA 2 cut(s) 1722, 3271
Bsp143I GATC 7 cut(s) 237, 373, 492, 1405, 1524, 1738, 1767
Bsp1720I GCTNAGC 1 cut(s) 486
Bsp19I CCATGG 1 cut(s) 3550
BspACI CCGC 4 cut(s) 1026, 1233, 2043, 3466
BspANI GGCC 8 cut(s) 251, 962, 1492, 2718, 3019, 3429, 3461, 3555
BspCNI CTCAG 6 cut(s) 34, 676, 1113, 1809, 3129, 3326
BspEI TCCGGA 2 cut(s) 1722, 3271
BspFNI CGCG 1 cut(s) 736
BspHI TCATGA 2 cut(s) 706, 2277
BspLI GGNNCC 7 cut(s) 101, 1231, 1981, 3355, 3356, 3462, 3597
BspPI GGATC 2 cut(s) 245, 1746
BspQI GCTCTTC 2 cut(s) 724, 2010
BspT107I GGYRCC 2 cut(s) 1229, 3595
BspTNI GGTCTC 1 cut(s) 701
BsrDI GCAATG 2 cut(s) 1741, 3201
BsrFI RCCGGY 2 cut(s) 962, 1962
BsrI ACTGG 7 cut(s) 59, 360, 1879, 2101, 2316, 3012, 3586
BssAI RCCGGY 2 cut(s) 962, 1962
BssECI CCNNGG 4 cut(s) 2212, 2995, 3072, 3550
BssMI GATC 7 cut(s) 237, 373, 492, 1405, 1524, 1738, 1767
BssNI GRCGYC 2 cut(s) 67, 1105
BssT1I CCWWGG 3 cut(s) 2212, 3072, 3550
Bst2UI CCWGG 2 cut(s) 71, 2997
Bst4CI ACNGT 9 cut(s) 52, 1051, 1358, 1590, 2747, 2807, 3040, 3456, 3515
Bst6I CTCTTC 7 cut(s) 420, 724, 2010, 2502, 2867, 2901, 3435
BstACI GRCGYC 2 cut(s) 67, 1105
BstAPI GCANNNNNTGC 1 cut(s) 1322
BstBAI YACGTR 1 cut(s) 3187
BstC8I GCNNGC 4 cut(s) 1083, 1918, 2197, 2564
BstDSI CCRYGG 1 cut(s) 3550
BstFNI CGCG 1 cut(s) 736
BstHHI GCGC 1 cut(s) 736
BstKTI GATC 7 cut(s) 240, 376, 495, 1408, 1527, 1741, 1770
BstMAI GTCTC 5 cut(s) 701, 710, 1724, 2774, 3119
BstMBI GATC 7 cut(s) 237, 373, 492, 1405, 1524, 1738, 1767
BstMWI GCNNNNNNNGC 7 cut(s) 731, 1322, 1489, 1979, 2171, 3367, 3370
BstNI CCWGG 2 cut(s) 71, 2997
BstNSI RCATGY 2 cut(s) 920, 3008
BstPAI GACNNNNGTC 1 cut(s) 1359
BstSCI CCNGG 3 cut(s) 69, 1611, 2995
BstSFI CTRYAG 1 cut(s) 113
BstSLI GKGCMC 1 cut(s) 3600
BstUI CGCG 1 cut(s) 736
BstV1I GCAGC 7 cut(s) 127, 1677, 3236, 3373, 3376, 3379, 3382
BstV2I GAAGAC 6 cut(s) 566, 731, 815, 849, 2471, 3389
BsuI GTATCC 2 cut(s) 2394, 2646
BsuRI GGCC 8 cut(s) 251, 962, 1492, 2718, 3019, 3429, 3461, 3555
BtgI CCRYGG 1 cut(s) 3550
BtrI CACGTC 2 cut(s) 1453, 1853
BtsI GCAGTG 2 cut(s) 1570, 2190
BtsIMutI CAGTG 5 cut(s) 1570, 1586, 2094, 2190, 2838
Cac8I GCNNGC 4 cut(s) 1083, 1918, 2197, 2564
CciI TCATGA 2 cut(s) 706, 2277
CfoI GCGC 1 cut(s) 736
Cfr10I RCCGGY 2 cut(s) 962, 1962
Cfr13I GGNCC 3 cut(s) 3212, 3354, 3460
CseI GACGC 3 cut(s) 75, 725, 1113
Csp6I GTAC 7 cut(s) 894, 1230, 1936, 2251, 2766, 3184, 3545
CspAI ACCGGT 1 cut(s) 1962
CspCI CAANNNNNGTGG 2 cut(s) 3589, 3624
CviQI GTAC 7 cut(s) 894, 1230, 1936, 2251, 2766, 3184, 3545
DpnI GATC 7 cut(s) 239, 375, 494, 1407, 1526, 1740, 1769
DpnII GATC 7 cut(s) 237, 373, 492, 1405, 1524, 1738, 1767
DraI TTTAAA 2 cut(s) 1636, 3384
EaeI YGGCCR 4 cut(s) 960, 1490, 3017, 3553
Eam1104I CTCTTC 7 cut(s) 420, 724, 2010, 2502, 2867, 2901, 3435
EarI CTCTTC 7 cut(s) 420, 724, 2010, 2502, 2867, 2901, 3435
Ecl136II GAGCTC 3 cut(s) 1061, 1192, 2020
Eco130I CCWWGG 3 cut(s) 2212, 3072, 3550
Eco24I GRGCYC 3 cut(s) 1063, 1194, 2022
Eco31I GGTCTC 1 cut(s) 701
Eco32I GATATC 1 cut(s) 2487
Eco47I GGWCC 2 cut(s) 3212, 3354
Eco53kI GAGCTC 3 cut(s) 1061, 1192, 2020
Eco57I CTGAAG 4 cut(s) 462, 867, 1581, 2465
Eco88I CYCGRG 1 cut(s) 1550
EcoICRI GAGCTC 3 cut(s) 1061, 1192, 2020
EcoO109I RGGNCCY 1 cut(s) 3354
EcoRI GAATTC 2 cut(s) 666, 1706
EcoRII CCWGG 2 cut(s) 69, 2995
EcoRV GATATC 1 cut(s) 2487
EcoT14I CCWWGG 3 cut(s) 2212, 3072, 3550
EcoT22I ATGCAT 4 cut(s) 1327, 1404, 3006, 3423
EcoT38I GRGCYC 3 cut(s) 1063, 1194, 2022
ErhI CCWWGG 3 cut(s) 2212, 3072, 3550
Esp3I CGTCTC 1 cut(s) 3119
FalI AAGNNNNNCTT 2 cut(s) 2649, 2681
FaqI GGGAC 1 cut(s) 3367
FauI CCCGC 1 cut(s) 3473
FbaI TGATCA 1 cut(s) 492
FblI GTMKAC 1 cut(s) 2547
Fnu4HI GCNGC 7 cut(s) 141, 1691, 3225, 3362, 3365, 3368, 3371
FriOI GRGCYC 3 cut(s) 1063, 1194, 2022
Fsp4HI GCNGC 7 cut(s) 141, 1691, 3225, 3362, 3365, 3368, 3371
GlaI GCGC 1 cut(s) 735
GluI GCNGC 7 cut(s) 141, 1691, 3225, 3362, 3365, 3368, 3371
GsaI CCCAGC 2 cut(s) 3224, 3361
GsuI CTGGAG 4 cut(s) 1995, 2333, 2597, 2742
HaeIII GGCC 8 cut(s) 251, 962, 1492, 2718, 3019, 3429, 3461, 3555
HapII CCGG 7 cut(s) 422, 963, 1612, 1723, 1963, 2825, 3272
HgaI GACGC 3 cut(s) 75, 725, 1113
HhaI GCGC 1 cut(s) 736
Hin1I GRCGYC 2 cut(s) 67, 1105
Hin6I GCGC 1 cut(s) 734
HinP1I GCGC 1 cut(s) 734
HincII GTYRAC 4 cut(s) 1255, 2750, 3036, 3061
HindII GTYRAC 4 cut(s) 1255, 2750, 3036, 3061
HindIII AAGCTT 2 cut(s) 1918, 2298
HpaII CCGG 7 cut(s) 422, 963, 1612, 1723, 1963, 2825, 3272
HphI GGTGA 4 cut(s) 977, 1039, 1893, 2419
Hpy188I TCNGA 8 cut(s) 662, 985, 1103, 1767, 1772, 2484, 3207, 3316
HpyAV CCTTC 5 cut(s) 1704, 2368, 2600, 3148, 3311
HpyCH4III ACNGT 9 cut(s) 52, 1051, 1358, 1590, 2747, 2807, 3040, 3456, 3515
HpyCH4IV ACGT 8 cut(s) 1452, 1727, 1852, 2476, 3063, 3112, 3186, 3543
HpyF10VI GCNNNNNNNGC 7 cut(s) 731, 1322, 1489, 1979, 2171, 3367, 3370
HpySE526I ACGT 8 cut(s) 1452, 1727, 1852, 2476, 3063, 3112, 3186, 3543
Hsp92I GRCGYC 2 cut(s) 67, 1105
HspAI GCGC 1 cut(s) 734
KflI GGGWCCC 1 cut(s) 3354
Kpn2I TCCGGA 2 cut(s) 1722, 3271
KpnI GGTACC 1 cut(s) 1233
Ksp22I TGATCA 1 cut(s) 492
Kzo9I GATC 7 cut(s) 237, 373, 492, 1405, 1524, 1738, 1767
LguI GCTCTTC 2 cut(s) 724, 2010
LmnI GCTCC 8 cut(s) 157, 1189, 1979, 2187, 2314, 2578, 2761, 3378
Lsp1109I GCAGC 7 cut(s) 127, 1677, 3236, 3373, 3376, 3379, 3382
LweI GCATC 7 cut(s) 666, 1312, 2326, 3262, 3408, 3430, 3477
MaeII ACGT 8 cut(s) 1452, 1727, 1852, 2476, 3063, 3112, 3186, 3543
MalI GATC 7 cut(s) 239, 375, 494, 1407, 1526, 1740, 1769
MboI GATC 7 cut(s) 237, 373, 492, 1405, 1524, 1738, 1767
MfeI CAATTG 3 cut(s) 214, 1844, 2784
MhlI GDGCHC 5 cut(s) 162, 1063, 1194, 2022, 3600
MlsI TGGCCA 2 cut(s) 1492, 3555
MluNI TGGCCA 2 cut(s) 1492, 3555
MlyI GAGTC 5 cut(s) 127, 712, 2918, 3284, 3403
MmeI TCCRAC 5 cut(s) 43, 1641, 1845, 2382, 2872
Mox20I TGGCCA 2 cut(s) 1492, 3555
Mph1103I ATGCAT 4 cut(s) 1327, 1404, 3006, 3423
MroI TCCGGA 2 cut(s) 1722, 3271
MroXI GAANNNNTTC 1 cut(s) 2478
MscI TGGCCA 2 cut(s) 1492, 3555
MslI CAYNNNNRTG 1 cut(s) 2322
Msp20I TGGCCA 2 cut(s) 1492, 3555
MspI CCGG 7 cut(s) 422, 963, 1612, 1723, 1963, 2825, 3272
MspR9I CCNGG 3 cut(s) 71, 1613, 2997
MunI CAATTG 3 cut(s) 214, 1844, 2784
Mva1269I GAATGC 2 cut(s) 1404, 3006
MvaI CCWGG 2 cut(s) 71, 2997
MvnI CGCG 1 cut(s) 736
MwoI GCNNNNNNNGC 7 cut(s) 731, 1322, 1489, 1979, 2171, 3367, 3370
NciI CCSGG 1 cut(s) 1613
NcoI CCATGG 1 cut(s) 3550
NdeII GATC 7 cut(s) 237, 373, 492, 1405, 1524, 1738, 1767
NlaIV GGNNCC 7 cut(s) 101, 1231, 1981, 3355, 3356, 3462, 3597
NmuCI GTSAC 6 cut(s) 592, 1045, 2801, 2910, 2973, 3021
NsiI ATGCAT 4 cut(s) 1327, 1404, 3006, 3423
NspI RCATGY 2 cut(s) 920, 3008
PagI TCATGA 2 cut(s) 706, 2277
PciI ACATGT 1 cut(s) 916
PciSI GCTCTTC 2 cut(s) 724, 2010
PctI GAATGC 2 cut(s) 1404, 3006
PdmI GAANNNNTTC 1 cut(s) 2478
PfeI GAWTC 7 cut(s) 467, 649, 2115, 2281, 2430, 2528, 3158
PflMI CCANNNNNTGG 1 cut(s) 2648
PfoI TCCNGGA 1 cut(s) 1611
PinAI ACCGGT 1 cut(s) 1962
PkrI GCNGC 7 cut(s) 142, 1692, 3226, 3363, 3366, 3369, 3372
PleI GAGTC 5 cut(s) 126, 712, 2917, 3283, 3402
PpsI GAGTC 5 cut(s) 126, 712, 2917, 3283, 3402
Ppu21I YACGTR 1 cut(s) 3187
PpuMI RGGWCCY 1 cut(s) 3354
PscI ACATGT 1 cut(s) 916
PshAI GACNNNNGTC 1 cut(s) 1359
PsiI TTATAA 1 cut(s) 1170
Psp124BI GAGCTC 3 cut(s) 1063, 1194, 2022
Psp5II RGGWCCY 1 cut(s) 3354
Psp6I CCWGG 2 cut(s) 69, 2995
PspFI CCCAGC 2 cut(s) 3220, 3357
PspGI CCWGG 2 cut(s) 69, 2995
PspN4I GGNNCC 7 cut(s) 101, 1231, 1981, 3355, 3356, 3462, 3597
PspPI GGNCC 3 cut(s) 3212, 3354, 3460
PspPPI RGGWCCY 1 cut(s) 3354
RsaI GTAC 7 cut(s) 895, 1231, 1937, 2252, 2767, 3185, 3546
RsaNI GTAC 7 cut(s) 894, 1230, 1936, 2251, 2766, 3184, 3545
RseI CAYNNNNRTG 1 cut(s) 2322
SacI GAGCTC 3 cut(s) 1063, 1194, 2022
SapI GCTCTTC 2 cut(s) 724, 2010
SatI GCNGC 7 cut(s) 141, 1691, 3225, 3362, 3365, 3368, 3371
Sau3AI GATC 7 cut(s) 237, 373, 492, 1405, 1524, 1738, 1767
Sau96I GGNCC 3 cut(s) 3212, 3354, 3460
ScaI AGTACT 1 cut(s) 1937
SchI GAGTC 5 cut(s) 127, 712, 2918, 3284, 3403
ScrFI CCNGG 3 cut(s) 71, 1613, 2997
SduI GDGCHC 5 cut(s) 162, 1063, 1194, 2022, 3600
SfaNI GCATC 7 cut(s) 666, 1312, 2326, 3262, 3408, 3430, 3477
SfcI CTRYAG 1 cut(s) 113
SinI GGWCC 2 cut(s) 3212, 3354
SmiMI CAYNNNNRTG 1 cut(s) 2322
SmlI CTYRAG 6 cut(s) 1193, 2021, 2614, 2981, 3082, 3257
SmoI CTYRAG 6 cut(s) 1193, 2021, 2614, 2981, 3082, 3257
SpeI ACTAGT 1 cut(s) 871
SsiI CCGC 4 cut(s) 1026, 1233, 2043, 3466
SspI AATATT 2 cut(s) 403, 849
SstI GAGCTC 3 cut(s) 1063, 1194, 2022
StyD4I CCNGG 3 cut(s) 69, 1611, 2995
StyI CCWWGG 3 cut(s) 2212, 3072, 3550
TaaI ACNGT 9 cut(s) 52, 1051, 1358, 1590, 2747, 2807, 3040, 3456, 3515
TaiI ACGT 8 cut(s) 1455, 1730, 1855, 2479, 3066, 3115, 3189, 3546
TaqI TCGA 6 cut(s) 810, 862, 1334, 1890, 2472, 3589
TatI WGTACW 3 cut(s) 1935, 2250, 2765
TfiI GAWTC 7 cut(s) 467, 649, 2115, 2281, 2430, 2528, 3158
TscAI CASTG 5 cut(s) 1577, 1593, 2101, 2197, 2838
TseFI GTSAC 6 cut(s) 592, 1045, 2801, 2910, 2973, 3021
TseI GCWGC 7 cut(s) 140, 1690, 3224, 3361, 3364, 3367, 3370
Tsp45I GTSAC 6 cut(s) 592, 1045, 2801, 2910, 2973, 3021
TspGWI ACGGA 1 cut(s) 3538
TspRI CASTG 5 cut(s) 1577, 1593, 2101, 2197, 2838
Van91I CCANNNNNTGG 1 cut(s) 2648
VpaK11BI GGWCC 2 cut(s) 3212, 3354
XbaI TCTAGA 3 cut(s) 1439, 1531, 2776
XceI RCATGY 2 cut(s) 920, 3008
XcmI CCANNNNNNNNNTGG 1 cut(s) 2126
XmiI GTMKAC 1 cut(s) 2547
XmnI GAANNNNTTC 1 cut(s) 2478
ZrmI AGTACT 1 cut(s) 1937
Zsp2I ATGCAT 4 cut(s) 1327, 1404, 3006, 3423
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.