Rh7BG205100

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Forward (+)
17155516 .. 17163430
7915 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG205100.1

Sequence Viewer

Length: 4176 bp
ATGGAGATTCCTGCTGCAATTGCCGGAAAACTTGCTGAATACACAGTTGAACCAATTGGACGCCAAGTGGGTTATCTAGCTCACTACAAACGCAACCATCAAAAGCTGCAGACCAAATTGAGGGACTTAAGTGCTGCCAGGGATGAGGTTCAACATAAGGTTGATCAAGTCAAGAGAGGAGGAGGTAAAAGAATCGAGACTACTGTTCTGAACTGGAAGACAAGAGTGGATGCAATCATCACAGAGGCAGAGGAATTCCTGAGAGACGACCGCCATGCGCAGACCGAGTGTCTTCATGGTTTTTGTCCTCATTTGGTGCTTCGTTATCGACTAAGCAGGAAATCAACAAAATTGGCGGAGGAGATTGATCAGCTTTATGGAAAAATTGATGAACTTGATAAAAAAAAGGAGTTCTCCAACTTTGCATATGATGTTCCTCCACAAGATTTATGTCTTTTATCTACCGGGCATTACAGTACATTCGATTCAAGGAATTCAGTTGTTTTGACAGTCATGGATGAACTGAGAAATCCGGATACAGAAATGATTCTGGTATGGGGAATCGGTGGAGTAGGGAAGACCACACTCGTTGAAGAAGTTCTTAGGCAAGCTAAGGATGTTAACTTATTTGATGATTTGGTGATGGTGAGAGATGTGAAAGACAACCCAGACCTTGAAAAAATCCAAAAAGAAATTGCCATGAAGTTGGGTATGAGCATTGTCGAAAATCATACTCTAGCTCAAAGAGCGCCCCTTCTAGGTGATAGGATAAAACAGAAAAGGACTCTTGTAGTTTTAGACGATGTTTGGGAAAAAATTGATCTACTGGCTGTCGGAGTTCCCCGTCTGGTGAACCTTAAAGTATTGTTAACATGTAGAAGCCGAAAGGAGTTATCATTGGATATGCGAACACAGAAAGATATTTCGGTTGATGTTTTAAATGAAAAGGAAGCATGGAGTTTATTTGAGAAGATGGCTGGTGATGTTGTCAAAGATAGCCGCATACGAAGCGTAGCAATTGAAGTAGCCAAAAAATGTGGAGGTTTGCCGGTCTTGATTGTTACGGTTGCAAGAGCTCTAAAAGACAGAAACAAGTTGCATCATTGGAATGACACCTTGAGACGTCTTAGAGGCTTTGACAACAAAGAATTGACCGAAAAAGCATACTTGGCTCTGGAGTGGAGTTACGATCAGTTGGAAGATAAAGAGCTTAAGTCTTTGTTCTTGCTTTGTGGGATTATTGTAGTTAAGAACCATATTTATTTGGCAGACTTGTTGAAATATGGTTTTGGTTTGGATTTGATTAAAAATGTCAATAAAATAGAAGATGCACGAGAGGCATTGTATACACTCGTTGACAAGCTTAAAGACTCTTGCTTGTTGCTGGACAGTGATATCAATATGCATGTTAGAATGCATGATCTTGTATGTGAGGTCGCTACACAGATTGCATCCAGAGATCGACATGTCTTATCAGTTGAGTATGGAGGTGAACTAAAAGAATGGCCTGATAAAGATTTCTTTGAAAGGTGTAGTAAGATGTCTTTAAAATCCAGCAATATTCCCATGCTTTCTGAAGTACCTTGGGAATGCCCGAAACTAGAAATGTTTCATTTGAAACTAGAAATGTTTCATTTGTACAAAAAATCAATCCCTTCCAACTTCTTTAGTGAAATGGAGAAACTGAAAGTGTTGGGTTTAACTAAAGTGCATATGCTGTCACTACCCCCCTCTCTTCAGTTCTTGAAGAATCTTCAGACATTGTGTTTAGAAGAATGTGTGTTGAAAGAGGTAGCTCTAGTTGGACATCTAAGCAACTTGGAGATTCTTAGCTTTGCGCGGTCCTACATTAAACAGCTACCCGAGGAAATAGGGCAATTGATTCGATTGAGATGGTTGGATTTGAGTGATTGTGCCCAACTTGAAGTGATTTCACCTAATGTTATTTCAAGGTTGGAAAGACTAGAAGACTTATCAATGAAAAACGTCCTTCTCAAATGGGAGGCTGAAAGGGGAGGAAGTAATGCTAGTCTTTTAGAGCTAAAAGACTTGTCTCAACTAACTGCATTGAAGATATATATTGAAGATGCAAATATTCTTCCATCAAACTTGTTCTCCAGTAAGTTGGTAAGATACCAAATATATATTGGCGATGTTTGGAAGAGCATATATGATTGGAAGAAGACTATGGCTGAAACGACCCTCAACACGCTAAAACTGAAGCTCGCTCCCAGCGATGAATTGGACCACAGTATCAAAACATTGTTGAAGAGATCTGAAGATTTGTCATTGGATGGAACAGAGAGTGCATGTGTTAATAGTATTGTCCGTCAATTACATGTTGAAGATTTTCAGCAACTGATACACCTCCGTCTCCAAAACAATGTTGATTTCACCTATATCATTAATAGGAAGGTTGTGTTCCCCAACTTAACAACCTTGAGCATATGTAGCTGTGACCATCTAAGTTTCTTGTTCTCATTTTCTATGGCTAAAAGTTTGGTGGAGCTCAAACATCTTGAAGTATCCAGATGTGCAAAAATGGAAGAGATAGTATCAGCAAGAGATCAATCCAATGGAGAAAATATCGATACCATGTTTTGTAAGTTGGAAAGTCTAATACTGGATAAACTCCCAAACATCACTGGATTCTGTACTGAAAGTTGTACTGAATTTTCTCCCGTGACGAAATTTGATACGGAACTGGGGGCATCCATCTTTGATCCTACGAGTAGTAAAAAACTTGATGTCGAGAATGGGACTATTGTACGAGCATGTCTTTTTGACGCACAGGTAAAATTTCCGAGCTTGGAGAGACTGAAAATCGATGGGCTAGGGAAGTTGCACACGCTATGGAACAATAAATTTGCTGATCAAGACTCTTTTTGCCAACTCAAAGAAGTTGAAGTTTCAAATTGCAACAGTCTGAAAAAGATCTTTCCAGTCTCAGTAGCCAGACGTCTCCAAAAGCTACATTCGCTGGATGTGAATGAGTGTGATGAAGTGGAGGAAATCATTACTGGTGAACAAGGACTAGAAACAGAGTCTCCTCATTTAGTGTTCCCAAAAGCAACACATGTGGAACTTTCTAATATGCCCAAACTGAGTAGATTCTATCCTGGGATTATTGCTTCCAAGTGGCCGTTACTCAAAGAACTATACATTTATGGATGTGGGAAAGTGAAGATGTTTGCCGCAGAACTTCCAATTTCTTCAGAAAGACATGAGCCGAACCCTCTAATTGAACAATCACTCTTTCTAATTGACAAGGATTCATTCCCCAATTTAGACTACTTAACCCTGGAAGTTGCGGGTGAGATAGAGATTTGGTACGGTCCATCATCATCCCCAGCACAGTTCTTTCCCAAATTAAAAGCTATTCAGTTTCTCAACCGGGCACCGTTCTCCAAGCAAGCCGCAATACATTTCCTTGAGAAATTACCGAATCTTGAGGAGATACTAGTGAGATTGGATGATGTTTCCACGGAAATATTTGTGAATGAAGAAATTAATGGCGGTGAGGAGATACACGCACTTGGGACGACCCGCTCAGGTGTCAAAACTTTGAGGGTCACTGACATGCCCAAGCTCTTGCAATTAGGGAATGGGAACTCTCAAACAGCGGGCCCACTTTTCCCAAACTTGGACACTCTCGATGTGGATAATTGTGAGATGTTAAAGAGTGTAGAGTCATCCGCAATATCCTTCCGCAATCTAACAACTCTGAGTGTAGGGAGTTGTGATGGATTGGAATACTTGACAAGTTATTCTGTAGCTCAGAGCTTAATGCAACTGACAACACTGGATGTGGGTTATTGTGGAAGGCTGAGAGCAATTATAGGGGCAAGCAACGAAGATGATCATGATACAGGAGCAACTTGTGAGATTGCTTTCAGCCGGTTGCAACATTTGACACTTTCTGATCTACCAAGACTGCAAGGCTTTTGCTCGGGAAATTGCATTGTCAAACTCCCATCCTCAACAGAGTTACGAGTCCGGGGCTGCCCGATTGAGTTGAAGATTTCTTCTGAAGGGGTCCTGCTCAGTAATCCAAATCCAGAAATAGCAGAGGAGGTAGATGATAATGATGATGATGATGATGATGGAGAAAAAGAAAAAGAAAAAGAAAAAGATGAGGATGTTGGCACGAGTCGCCAAGACATTGAAGATATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1391

Amino Acids

157.63

Weight (kDa)

5.38

Isoelectric Point (pI)

45.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 170 - 327 2.1e-24 NB-ARC domain
LRR_14 PF23598 548 - 845 9.9e-12 Leucine-rich repeat region
LRR_RPS2 PF23247 789 - 886 8.7e-11 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 933 - 1000 7.3e-17 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1106 - 1229 5.8e-11 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1233 - 1335 2.7e-10 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 1126, 2962
Acc16I TGCGCA 1 cut(s) 279
AccB1I GGYRCC 1 cut(s) 3397
AccBSI CCGCTC 1 cut(s) 3549
AccI GTMKAC 1 cut(s) 1346
AccII CGCG 1 cut(s) 1840
AccIII TCCGGA 1 cut(s) 532
AclWI GGATC 1 cut(s) 2717
AcoI YGGCCR 1 cut(s) 3140
AcsI RAATTY 6 cut(s) 254, 493, 2672, 2690, 2798, 2864
AcuI CTGAAG 7 cut(s) 1596, 1721, 1739, 2240, 2298, 3198, 4050
AcyI GRCGYC 3 cut(s) 61, 1123, 2959
AfaI GTAC 7 cut(s) 478, 1581, 1640, 2656, 2668, 2769, 3332
AfiI CCNNNNNNNGG 3 cut(s) 120, 758, 3643
AflII CTTAAG 2 cut(s) 127, 1211
AflIII ACRYGT 4 cut(s) 872, 1465, 2338, 3076
AhdI GACNNNNNGTC 1 cut(s) 288
AhlI ACTAGT 1 cut(s) 3460
AjnI CCWGG 3 cut(s) 137, 3118, 3300
Alw21I GWGCWC 2 cut(s) 1078, 2511
Alw26I GTCTC 9 cut(s) 191, 258, 1114, 2058, 2378, 2809, 2950, 2966, 3051
AlwI GGATC 1 cut(s) 2717
AlwNI CAGNNNCTG 1 cut(s) 2359
Ama87I CYCGRG 2 cut(s) 1862, 3949
Aor13HI TCCGGA 1 cut(s) 532
AoxI GGCC 3 cut(s) 1505, 3140, 3625
ApaI GGGCCC 1 cut(s) 3629
ApeKI GCWGC 4 cut(s) 14, 106, 134, 4002
ApoI RAATTY 6 cut(s) 254, 493, 2672, 2690, 2798, 2864
AseI ATTAAT 2 cut(s) 2406, 3510
Asp700I GAANNNNTTC 5 cut(s) 546, 597, 1608, 1629, 2349
AspLEI GCGC 3 cut(s) 280, 751, 1840
AspS9I GGNCC 6 cut(s) 1842, 2245, 3335, 3625, 3626, 4036
AsuC2I CCSGG 3 cut(s) 466, 3395, 3998
AvaI CYCGRG 2 cut(s) 1862, 3949
AvaII GGWCC 4 cut(s) 1842, 2245, 3335, 4036
BaeGI GKGCMC 3 cut(s) 1918, 3400, 3629
BaeI ACNNNNGTAYC 2 cut(s) 2236, 2269
BanI GGYRCC 1 cut(s) 3397
BanII GRGCYC 3 cut(s) 1078, 2511, 3629
BauI CACGAG 2 cut(s) 1332, 4147
BbsI GAAGAC 5 cut(s) 224, 284, 584, 1974, 2189
Bbv12I GWGCWC 2 cut(s) 1078, 2511
BbvI GCAGC 3 cut(s) 93, 121, 3989
BceAI ACGGC 1 cut(s) 3127
BcgI CGANNNNNNTGC 4 cut(s) 257, 291, 1865, 1899
BciT130I CCWGG 3 cut(s) 139, 3120, 3302
BciVI GTATCC 2 cut(s) 529, 2536
BclI TGATCA 4 cut(s) 163, 367, 2872, 3859
BcnI CCSGG 3 cut(s) 466, 3395, 3998
BcoDI GTCTC 9 cut(s) 191, 258, 1114, 2058, 2378, 2809, 2950, 2966, 3051
BcuI ACTAGT 1 cut(s) 3460
BfmI CTRYAG 2 cut(s) 107, 3771
BfoI RGCGCY 1 cut(s) 752
BfrI CTTAAG 2 cut(s) 127, 1211
BfuI GTATCC 2 cut(s) 529, 2536
BglII AGATCT 2 cut(s) 2273, 2934
BisI GCNGC 7 cut(s) 15, 107, 135, 1000, 3195, 3417, 4003
BlsI GCNGC 7 cut(s) 16, 108, 136, 1001, 3196, 3418, 4004
Bme1390I CCNGG 6 cut(s) 139, 466, 3120, 3302, 3395, 3998
Bme18I GGWCC 4 cut(s) 1842, 2245, 3335, 4036
BmeRI GACNNNNNGTC 1 cut(s) 288
BmeT110I CYCGRG 2 cut(s) 1862, 3949
BmgT120I GGNCC 6 cut(s) 1842, 2245, 3335, 3625, 3626, 4036
BmiI GGNNCC 3 cut(s) 3399, 3627, 4037
BmrFI CCNGG 6 cut(s) 139, 466, 3120, 3302, 3395, 3998
BmrI ACTGGG 1 cut(s) 2714
BmsI GCATC 6 cut(s) 220, 1108, 1318, 1460, 2077, 2720
BmuI ACTGGG 1 cut(s) 2714
BpiI GAAGAC 5 cut(s) 224, 284, 584, 1974, 2189
BpmI CTGGAG 2 cut(s) 1196, 2101
Bpu10I CCTNAGC 2 cut(s) 612, 3550
BpuEI CTTGAG 4 cut(s) 1138, 2461, 3452, 3470
BpuMI CCSGG 3 cut(s) 466, 3395, 3998
Bsa29I ATCGAT 2 cut(s) 2589, 2826
BsaHI GRCGYC 3 cut(s) 61, 1123, 2959
BsaJI CCNNGG 7 cut(s) 138, 1583, 1863, 3119, 3300, 3483, 3997
BsaWI WCCGGW 1 cut(s) 532
BsaXI ACNNNNNCTCC 4 cut(s) 2099, 2129, 3031, 3061
Bsc4I CCNNNNNNNGG 3 cut(s) 120, 758, 3643
Bse118I RCCGGY 2 cut(s) 1048, 3897
Bse1I ACTGG 9 cut(s) 218, 831, 2118, 2628, 2650, 2709, 2942, 3025, 3807
BseAI TCCGGA 1 cut(s) 532
BseBI CCWGG 3 cut(s) 139, 3120, 3302
BseCI ATCGAT 2 cut(s) 2589, 2826
BseDI CCNNGG 7 cut(s) 138, 1583, 1863, 3119, 3300, 3483, 3997
BseLI CCNNNNNNNGG 3 cut(s) 120, 758, 3643
BseMII CTCAG 9 cut(s) 251, 515, 2961, 3095, 3564, 3716, 3791, 3818, 4057
BseNI ACTGG 9 cut(s) 218, 831, 2118, 2628, 2650, 2709, 2942, 3025, 3807
BseRI GAGGAG 7 cut(s) 192, 195, 374, 3039, 3467, 3536, 4085
BseSI GKGCMC 3 cut(s) 1918, 3400, 3629
BseXI GCAGC 3 cut(s) 93, 121, 3989
BseYI CCCAGC 2 cut(s) 2231, 3349
Bsh1236I CGCG 1 cut(s) 1840
Bsh1285I CGRYCG 1 cut(s) 271
BshFI GGCC 3 cut(s) 1507, 3142, 3627
BshNI GGYRCC 1 cut(s) 3397
BshVI ATCGAT 2 cut(s) 2589, 2826
BsiEI CGRYCG 1 cut(s) 271
BsiHKAI GWGCWC 2 cut(s) 1078, 2511
BsiHKCI CYCGRG 2 cut(s) 1862, 3949
BsiSI CCGG 7 cut(s) 24, 465, 533, 1049, 3394, 3898, 3997
BslFI GGGAC 3 cut(s) 137, 2773, 3553
BslI CCNNNNNNNGG 3 cut(s) 120, 758, 3643
BsmAI GTCTC 9 cut(s) 191, 258, 1114, 2058, 2378, 2809, 2950, 2966, 3051
BsmBI CGTCTC 4 cut(s) 258, 1114, 2378, 2966
BsmFI GGGAC 3 cut(s) 137, 2773, 3553
BsmI GAATGC 2 cut(s) 1419, 1595
BsnI GGCC 3 cut(s) 1507, 3142, 3627
BsoBI CYCGRG 2 cut(s) 1862, 3949
Bsp120I GGGCCC 1 cut(s) 3625
Bsp1286I GDGCHC 5 cut(s) 1078, 1918, 2511, 3400, 3629
Bsp13I TCCGGA 1 cut(s) 532
Bsp1407I TGTACA 1 cut(s) 1638
BspANI GGCC 3 cut(s) 1507, 3142, 3627
BspCNI CTCAG 9 cut(s) 252, 516, 2960, 3096, 3563, 3717, 3790, 3819, 4056
BspDI ATCGAT 2 cut(s) 2589, 2826
BspEI TCCGGA 1 cut(s) 532
BspFNI CGCG 1 cut(s) 1840
BspHI TCATGA 1 cut(s) 3862
BspLI GGNNCC 3 cut(s) 3399, 3627, 4037
BspMAI CTGCAG 1 cut(s) 111
BspPI GGATC 1 cut(s) 2717
BspQI GCTCTTC 1 cut(s) 2156
BspT107I GGYRCC 1 cut(s) 3397
BspTI CTTAAG 2 cut(s) 127, 1211
BsrBI CCGCTC 1 cut(s) 3549
BsrFI RCCGGY 2 cut(s) 1048, 3897
BsrGI TGTACA 1 cut(s) 1638
BsrI ACTGG 9 cut(s) 218, 831, 2118, 2628, 2650, 2709, 2942, 3025, 3807
BssAI RCCGGY 2 cut(s) 1048, 3897
BssECI CCNNGG 7 cut(s) 138, 1583, 1863, 3119, 3300, 3483, 3997
BssNAI GTATAC 1 cut(s) 1347
BssNI GRCGYC 3 cut(s) 61, 1123, 2959
BssSI CACGAG 2 cut(s) 1332, 4147
BssT1I CCWWGG 1 cut(s) 1583
Bst1107I GTATAC 1 cut(s) 1347
Bst2BI CACGAG 2 cut(s) 1332, 4147
Bst2UI CCWGG 3 cut(s) 139, 3120, 3302
Bst6I CTCTTC 4 cut(s) 1740, 2156, 2264, 2541
BstACI GRCGYC 3 cut(s) 61, 1123, 2959
BstAFI CTTAAG 2 cut(s) 127, 1211
BstAUI TGTACA 1 cut(s) 1638
BstC8I GCNNGC 5 cut(s) 609, 2226, 3414, 3625, 3847
BstDSI CCRYGG 1 cut(s) 3483
BstFNI CGCG 1 cut(s) 1840
BstH2I RGCGCY 1 cut(s) 752
BstHHI GCGC 3 cut(s) 280, 751, 1840
BstMAI GTCTC 9 cut(s) 191, 258, 1114, 2058, 2378, 2809, 2950, 2966, 3051
BstMCI CGRYCG 1 cut(s) 271
BstMWI GCNNNNNNNGC 8 cut(s) 20, 746, 1008, 1169, 1337, 2451, 2977, 4152
BstNI CCWGG 3 cut(s) 139, 3120, 3302
BstNSI RCATGY 8 cut(s) 876, 1409, 1469, 2313, 2342, 2778, 3080, 3583
BstSCI CCNGG 6 cut(s) 137, 464, 3118, 3300, 3393, 3996
BstSFI CTRYAG 2 cut(s) 107, 3771
BstSLI GKGCMC 3 cut(s) 1918, 3400, 3629
BstUI CGCG 1 cut(s) 1840
BstV1I GCAGC 3 cut(s) 93, 121, 3989
BstV2I GAAGAC 5 cut(s) 224, 284, 584, 1974, 2189
BstX2I RGATCY 2 cut(s) 2273, 2934
BstXI CCANNNNNNTGG 2 cut(s) 706, 2125
BstYI RGATCY 2 cut(s) 2273, 2934
BstZ17I GTATAC 1 cut(s) 1347
Bsu15I ATCGAT 2 cut(s) 2589, 2826
BsuI GTATCC 2 cut(s) 529, 2536
BsuRI GGCC 3 cut(s) 1507, 3142, 3627
BsuTUI ATCGAT 2 cut(s) 2589, 2826
BtgI CCRYGG 1 cut(s) 3483
BtgZI GCGATG 2 cut(s) 2166, 2250
BtsIMutI CAGTG 4 cut(s) 1396, 2643, 3573, 3800
Cac8I GCNNGC 5 cut(s) 609, 2226, 3414, 3625, 3847
CaiI CAGNNNCTG 1 cut(s) 2359
CciI TCATGA 1 cut(s) 3862
CfoI GCGC 3 cut(s) 280, 751, 1840
Cfr10I RCCGGY 2 cut(s) 1048, 3897
Cfr13I GGNCC 6 cut(s) 1842, 2245, 3335, 3625, 3626, 4036
ClaI ATCGAT 2 cut(s) 2589, 2826
CseI GACGC 2 cut(s) 69, 2795
Csp6I GTAC 7 cut(s) 477, 1580, 1639, 2655, 2667, 2768, 3331
CspCI CAANNNNNGTGG 6 cut(s) 571, 606, 1018, 1053, 3060, 3095
CviQI GTAC 7 cut(s) 477, 1580, 1639, 2655, 2667, 2768, 3331
DraI TTTAAA 2 cut(s) 939, 1548
DriI GACNNNNNGTC 1 cut(s) 288
EaeI YGGCCR 1 cut(s) 3140
Eam1104I CTCTTC 4 cut(s) 1740, 2156, 2264, 2541
Eam1105I GACNNNNNGTC 1 cut(s) 288
EarI CTCTTC 4 cut(s) 1740, 2156, 2264, 2541
EciI GGCGGA 1 cut(s) 371
Ecl136II GAGCTC 2 cut(s) 1076, 2509
Eco130I CCWWGG 1 cut(s) 1583
Eco24I GRGCYC 3 cut(s) 1078, 2511, 3629
Eco32I GATATC 1 cut(s) 1396
Eco47I GGWCC 4 cut(s) 1842, 2245, 3335, 4036
Eco53kI GAGCTC 2 cut(s) 1076, 2509
Eco57I CTGAAG 7 cut(s) 1596, 1721, 1739, 2240, 2298, 3198, 4050
Eco88I CYCGRG 2 cut(s) 1862, 3949
EcoICRI GAGCTC 2 cut(s) 1076, 2509
EcoO109I RGGNCCY 1 cut(s) 4036
EcoRI GAATTC 2 cut(s) 254, 493
EcoRII CCWGG 3 cut(s) 137, 3118, 3300
EcoRV GATATC 1 cut(s) 1396
EcoT14I CCWWGG 1 cut(s) 1583
EcoT22I ATGCAT 2 cut(s) 1407, 1419
EcoT38I GRGCYC 3 cut(s) 1078, 2511, 3629
ErhI CCWWGG 1 cut(s) 1583
Esp3I CGTCTC 4 cut(s) 258, 1114, 2378, 2966
FalI AAGNNNNNCTT 2 cut(s) 585, 617
FaqI GGGAC 3 cut(s) 137, 2773, 3553
FauI CCCGC 3 cut(s) 3304, 3554, 3616
FauNDI CATATG 3 cut(s) 427, 1713, 2447
FbaI TGATCA 4 cut(s) 163, 367, 2872, 3859
FblI GTMKAC 1 cut(s) 1346
Fnu4HI GCNGC 7 cut(s) 15, 107, 135, 1000, 3195, 3417, 4003
FriOI GRGCYC 3 cut(s) 1078, 2511, 3629
Fsp4HI GCNGC 7 cut(s) 15, 107, 135, 1000, 3195, 3417, 4003
FspI TGCGCA 1 cut(s) 279
GlaI GCGC 3 cut(s) 279, 750, 1839
GluI GCNGC 7 cut(s) 15, 107, 135, 1000, 3195, 3417, 4003
GsaI CCCAGC 2 cut(s) 2235, 3353
GsuI CTGGAG 2 cut(s) 1196, 2101
HaeII RGCGCY 1 cut(s) 752
HaeIII GGCC 3 cut(s) 1507, 3142, 3627
HapII CCGG 7 cut(s) 24, 465, 533, 1049, 3394, 3898, 3997
HgaI GACGC 2 cut(s) 69, 2795
HhaI GCGC 3 cut(s) 280, 751, 1840
Hin1I GRCGYC 3 cut(s) 61, 1123, 2959
Hin6I GCGC 3 cut(s) 278, 749, 1838
HinP1I GCGC 3 cut(s) 278, 749, 1838
HincII GTYRAC 3 cut(s) 622, 870, 1357
HindII GTYRAC 3 cut(s) 622, 870, 1357
HindIII AAGCTT 1 cut(s) 1361
HpaI GTTAAC 2 cut(s) 622, 870
HpaII CCGG 7 cut(s) 24, 465, 533, 1049, 3394, 3898, 3997
Hpy166II GTNNAC 7 cut(s) 622, 853, 870, 1347, 1357, 1493, 3026
Hpy8I GTNNAC 7 cut(s) 622, 853, 870, 1347, 1357, 1493, 3026
HpyAV CCTTC 7 cut(s) 764, 1665, 2000, 2407, 3715, 3816, 4025
HpyCH4IV ACGT 3 cut(s) 1123, 1986, 2959
HpyF10VI GCNNNNNNNGC 8 cut(s) 20, 746, 1008, 1169, 1337, 2451, 2977, 4152
HpySE526I ACGT 3 cut(s) 1123, 1986, 2959
Hsp92I GRCGYC 3 cut(s) 61, 1123, 2959
HspAI GCGC 3 cut(s) 278, 749, 1838
Kpn2I TCCGGA 1 cut(s) 532
Ksp22I TGATCA 4 cut(s) 163, 367, 2872, 3859
KspAI GTTAAC 2 cut(s) 622, 870
LguI GCTCTTC 1 cut(s) 2156
LmnI GCTCC 3 cut(s) 2233, 2506, 3872
Lsp1109I GCAGC 3 cut(s) 93, 121, 3989
LweI GCATC 6 cut(s) 220, 1108, 1318, 1460, 2077, 2720
MaeII ACGT 3 cut(s) 1123, 1986, 2959
MaeIII GTNAC 8 cut(s) 1060, 1184, 1719, 2456, 2683, 3144, 3571, 3987
MbiI CCGCTC 1 cut(s) 3549
MfeI CAATTG 4 cut(s) 18, 54, 1017, 1877
MflI RGATCY 2 cut(s) 2273, 2934
MhlI GDGCHC 5 cut(s) 1078, 1918, 2511, 3400, 3629
MlyI GAGTC 7 cut(s) 778, 1364, 2873, 3053, 3698, 4002, 4159
MmeI TCCRAC 8 cut(s) 441, 814, 1176, 1683, 1783, 1878, 1935, 2589
Mph1103I ATGCAT 2 cut(s) 1407, 1419
MroI TCCGGA 1 cut(s) 532
MroXI GAANNNNTTC 5 cut(s) 546, 597, 1608, 1629, 2349
MslI CAYNNNNRTG 2 cut(s) 1107, 3578
MspA1I CMGCKG 1 cut(s) 3623
MspCI CTTAAG 2 cut(s) 127, 1211
MspI CCGG 7 cut(s) 24, 465, 533, 1049, 3394, 3898, 3997
MspR9I CCNGG 6 cut(s) 139, 466, 3120, 3302, 3395, 3998
MunI CAATTG 4 cut(s) 18, 54, 1017, 1877
Mva1269I GAATGC 2 cut(s) 1419, 1595
MvaI CCWGG 3 cut(s) 139, 3120, 3302
MvnI CGCG 1 cut(s) 1840
MwoI GCNNNNNNNGC 8 cut(s) 20, 746, 1008, 1169, 1337, 2451, 2977, 4152
NciI CCSGG 3 cut(s) 466, 3395, 3998
NdeI CATATG 3 cut(s) 427, 1713, 2447
NlaIV GGNNCC 3 cut(s) 3399, 3627, 4037
NmuCI GTSAC 4 cut(s) 1719, 2456, 2683, 3571
NsbI TGCGCA 1 cut(s) 279
NsiI ATGCAT 2 cut(s) 1407, 1419
NspI RCATGY 8 cut(s) 876, 1409, 1469, 2313, 2342, 2778, 3080, 3583
PagI TCATGA 1 cut(s) 3862
PciI ACATGT 4 cut(s) 872, 1465, 2338, 3076
PciSI GCTCTTC 1 cut(s) 2156
PcsI WCGNNNNNNNCGW 1 cut(s) 2232
PctI GAATGC 2 cut(s) 1419, 1595
PdmI GAANNNNTTC 5 cut(s) 546, 597, 1608, 1629, 2349
PkrI GCNGC 7 cut(s) 16, 108, 136, 1001, 3196, 3418, 4004
PleI GAGTC 7 cut(s) 778, 1364, 2873, 3052, 3697, 4001, 4158
PpsI GAGTC 7 cut(s) 778, 1364, 2873, 3052, 3697, 4001, 4158
PpuMI RGGWCCY 1 cut(s) 4036
PscI ACATGT 4 cut(s) 872, 1465, 2338, 3076
PshBI ATTAAT 2 cut(s) 2406, 3510
Psp124BI GAGCTC 2 cut(s) 1078, 2511
Psp5II RGGWCCY 1 cut(s) 4036
Psp6I CCWGG 3 cut(s) 137, 3118, 3300
PspFI CCCAGC 2 cut(s) 2231, 3349
PspGI CCWGG 3 cut(s) 137, 3118, 3300
PspN4I GGNNCC 3 cut(s) 3399, 3627, 4037
PspOMI GGGCCC 1 cut(s) 3625
PspPI GGNCC 6 cut(s) 1842, 2245, 3335, 3625, 3626, 4036
PspPPI RGGWCCY 1 cut(s) 4036
PstI CTGCAG 1 cut(s) 111
PstNI CAGNNNCTG 1 cut(s) 2359
PsuI RGATCY 2 cut(s) 2273, 2934
RsaI GTAC 7 cut(s) 478, 1581, 1640, 2656, 2668, 2769, 3332
RsaNI GTAC 7 cut(s) 477, 1580, 1639, 2655, 2667, 2768, 3331
RseI CAYNNNNRTG 2 cut(s) 1107, 3578
SacI GAGCTC 2 cut(s) 1078, 2511
SapI GCTCTTC 1 cut(s) 2156
SatI GCNGC 7 cut(s) 15, 107, 135, 1000, 3195, 3417, 4003
Sau96I GGNCC 6 cut(s) 1842, 2245, 3335, 3625, 3626, 4036
SchI GAGTC 7 cut(s) 778, 1364, 2873, 3053, 3698, 4002, 4159
ScrFI CCNGG 6 cut(s) 139, 466, 3120, 3302, 3395, 3998
SduI GDGCHC 5 cut(s) 1078, 1918, 2511, 3400, 3629
SfaNI GCATC 6 cut(s) 220, 1108, 1318, 1460, 2077, 2720
SfcI CTRYAG 2 cut(s) 107, 3771
SinI GGWCC 4 cut(s) 1842, 2245, 3335, 4036
SmiMI CAYNNNNRTG 2 cut(s) 1107, 3578
SmlI CTYRAG 6 cut(s) 127, 1117, 1211, 2440, 3431, 3449
SmoI CTYRAG 6 cut(s) 127, 1117, 1211, 2440, 3431, 3449
SpeI ACTAGT 1 cut(s) 3460
SspI AATATT 3 cut(s) 1561, 2095, 3492
SstI GAGCTC 2 cut(s) 1078, 2511
StyD4I CCNGG 6 cut(s) 137, 464, 3118, 3300, 3393, 3996
StyI CCWWGG 1 cut(s) 1583
TaiI ACGT 3 cut(s) 1126, 1989, 2962
TaqII GACCGA 2 cut(s) 299, 1169
TatI WGTACW 4 cut(s) 476, 1638, 2654, 2666
TauI GCSGC 3 cut(s) 1002, 3197, 3419
TscAI CASTG 4 cut(s) 1396, 2650, 3580, 3807
TseFI GTSAC 4 cut(s) 1719, 2456, 2683, 3571
TseI GCWGC 4 cut(s) 14, 106, 134, 4002
Tsp45I GTSAC 4 cut(s) 1719, 2456, 2683, 3571
TspGWI ACGGA 4 cut(s) 2318, 2360, 2714, 3500
TspRI CASTG 4 cut(s) 1396, 2650, 3580, 3807
Vha464I CTTAAG 2 cut(s) 127, 1211
VpaK11BI GGWCC 4 cut(s) 1842, 2245, 3335, 4036
VspI ATTAAT 2 cut(s) 2406, 3510
XapI RAATTY 6 cut(s) 254, 493, 2672, 2690, 2798, 2864
XceI RCATGY 8 cut(s) 876, 1409, 1469, 2313, 2342, 2778, 3080, 3583
XcmI CCANNNNNNNNNTGG 2 cut(s) 2144, 2239
XmiI GTMKAC 1 cut(s) 1346
XmnI GAANNNNTTC 5 cut(s) 546, 597, 1608, 1629, 2349
ZraI GACGTC 2 cut(s) 1124, 2960
Zsp2I ATGCAT 2 cut(s) 1407, 1419
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.