Rmu_sc0000361.1_g000023

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000361.1
OG0000042
Physical Location & Seq
Reverse (-)
120667 .. 122335
1669 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000361.1_g000023.1.cds

Sequence Viewer

Length: 1452 bp
atggtattggatgtcaagcagaatccaagcatcggaagaattcaaaatgaaattgctgagaagttaggtctcatatttcatgaaattgagactctagctggaagagcgcgtcgtctatgtaacaggttaaaagacaagaaatctcttgtaattttagatgatatttgggaaaacattgatttggagaatgtgggtcttccttgcatggcaactctcaaaatattgttgtcttctcgaagtaaactagtattgacttcaggcatgggtacacaaaaagagtttcctctacaagttttagacaaagacgaaacttggagtttatttaagaagatgactggtgatattgttgaaaattctgacatacagattgtagctatccaagtagctgaaaaatgtgtcgaaaaaacatactctgctattaagtggagttacaataaattggatgatgaggagctcaagtcattgttcatgctttgtggagttgtggttggtaccaccaacacttttaatatcattgacttgtggaaatatagtatgggtttgggtttgttaaaagatttcgatacaataggagaggcaagggatgcattatgttcgatgattgaacaactcaaagactgttgtctattgctagagagtgatgataatacgcttgttagaatgcatgatcttgtaaaagatgttgctaaaaagattgcttctagagagcaacacgtcttatcagtatctcttgggaatgagttgagagaatggccagataatgaattttgggaaaagtgcattatgatctttctagaccaatgtaaaatccctgagtttcctgaagttttgcaatgccaacaactgacactgtttcacttagataatgaagtccgggaaatcccatgcaatctttttaaagagatgaaaaaacccaaagtgttggatttaactagcttgactatcccgttgctgccttcatctcttgaattcctaaaaagtctctggatgttgtgtttggatcattgcacattgggagatgtaactctgatcggacatctacgaaacttggaaattctcagctttttgaacaagcttgaaaagattagagtacttgcgaatgagaaaagttttaaccggtgggaggctggaggagtcatcagcatagaaagaagtaatgcaaaccttgaagagatcaagcacttgcctcacctaaccgcattacaactacatatcccaaatgccaacattcttccaccagatttattcactggttgtcagttagagagattccaaatatgtattgtctctgtgtggaaatgggatgatgtggatgaagccatcaatgcactaaagctccacctcactgccagcaatcaatttgaccaaggactagaaatgttggtaaagagaactaaagacttgtacttggagggtgtttatagcagtatcgtgaatcaactaggtgtctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

483

Amino Acids

55.14

Weight (kDa)

5.22

Isoelectric Point (pI)

33.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 491
AccB1I GGYRCC 1 cut(s) 491
AccII CGCG 1 cut(s) 109
AciI CCGC 1 cut(s) 1197
AclWI GGATC 1 cut(s) 1008
AcoI YGGCCR 1 cut(s) 752
AcsI RAATTY 5 cut(s) 39, 352, 764, 968, 1053
AcuI CTGAAG 2 cut(s) 240, 843
AfaI GTAC 4 cut(s) 268, 493, 1092, 1406
AfiI CCNNNNNNNGG 2 cut(s) 32, 1123
AflIII ACRYGT 1 cut(s) 712
AgeI ACCGGT 1 cut(s) 1116
AgsI TTSAA 7 cut(s) 44, 350, 605, 968, 1069, 1079, 1169
AhlI ACTAGT 1 cut(s) 244
AjiI CACGTC 1 cut(s) 715
AluBI AGCT 8 cut(s) 98, 374, 386, 454, 936, 1062, 1075, 1336
AluI AGCT 8 cut(s) 98, 374, 386, 454, 936, 1062, 1075, 1336
Alw21I GWGCWC 1 cut(s) 456
Alw26I GTCTC 4 cut(s) 74, 83, 986, 1291
AlwI GGATC 1 cut(s) 1008
AoxI GGCC 1 cut(s) 752
ApeKI GCWGC 1 cut(s) 952
ApoI RAATTY 5 cut(s) 39, 352, 764, 968, 1053
AsiGI ACCGGT 1 cut(s) 1116
Asp718I GGTACC 1 cut(s) 491
AspLEI GCGC 1 cut(s) 109
AsuC2I CCSGG 1 cut(s) 875
AsuHPI GGTGA 2 cut(s) 350, 1181
BalI TGGCCA 1 cut(s) 754
BanI GGYRCC 1 cut(s) 491
BanII GRGCYC 1 cut(s) 456
BbsI GAAGAC 2 cut(s) 188, 222
Bbv12I GWGCWC 1 cut(s) 456
BbvI GCAGC 1 cut(s) 939
BccI CCATC 1 cut(s) 1328
BcgI CGANNNNNNTGC 2 cut(s) 576, 610
BcnI CCSGG 1 cut(s) 875
BcoDI GTCTC 4 cut(s) 74, 83, 986, 1291
BcuI ACTAGT 1 cut(s) 244
BfaI CTAG 8 cut(s) 95, 245, 632, 702, 794, 933, 1373, 1442
BisI GCNGC 1 cut(s) 953
BlsI GCNGC 1 cut(s) 954
BmcAI AGTACT 1 cut(s) 1092
Bme1390I CCNGG 1 cut(s) 875
BmgBI CACGTC 1 cut(s) 715
BmiI GGNNCC 1 cut(s) 493
BmrFI CCNGG 1 cut(s) 875
BmsI GCATC 2 cut(s) 39, 574
BoxI GACNNNNGTC 1 cut(s) 621
BpiI GAAGAC 2 cut(s) 188, 222
BpmI CTGGAG 1 cut(s) 1149
BpuEI CTTGAG 1 cut(s) 440
BpuMI CCSGG 1 cut(s) 875
BsaI GGTCTC 1 cut(s) 74
BsaJI CCNNGG 1 cut(s) 1366
BsaWI WCCGGW 1 cut(s) 1116
BsaXI ACNNNNNCTCC 6 cut(s) 443, 471, 473, 501, 1320, 1350
Bsc4I CCNNNNNNNGG 2 cut(s) 32, 1123
Bse118I RCCGGY 1 cut(s) 1116
Bse1I ACTGG 2 cut(s) 340, 1255
Bse3DI GCAATG 2 cut(s) 839, 1003
BseDI CCNNGG 1 cut(s) 1366
BseGI GGATG 6 cut(s) 16, 448, 589, 993, 1309, 1318
BseLI CCNNNNNNNGG 2 cut(s) 32, 1123
BseMI GCAATG 2 cut(s) 839, 1003
BseMII CTCAG 3 cut(s) 48, 804, 1072
BseNI ACTGG 2 cut(s) 340, 1255
BseRI GAGGAG 2 cut(s) 464, 1146
BseXI GCAGC 1 cut(s) 939
Bsh1236I CGCG 1 cut(s) 109
BshFI GGCC 1 cut(s) 754
BshNI GGYRCC 1 cut(s) 491
BshTI ACCGGT 1 cut(s) 1116
BsiHKAI GWGCWC 1 cut(s) 456
BsiSI CCGG 2 cut(s) 874, 1117
BslI CCNNNNNNNGG 2 cut(s) 32, 1123
BsmAI GTCTC 4 cut(s) 74, 83, 986, 1291
BsmI GAATGC 1 cut(s) 666
BsnI GGCC 1 cut(s) 754
Bso31I GGTCTC 1 cut(s) 74
Bsp1286I GDGCHC 1 cut(s) 456
Bsp143I GATC 5 cut(s) 667, 786, 1000, 1029, 1173
BspACI CCGC 1 cut(s) 1197
BspANI GGCC 1 cut(s) 754
BspCNI CTCAG 3 cut(s) 49, 805, 1071
BspFNI CGCG 1 cut(s) 109
BspHI TCATGA 1 cut(s) 79
BspLI GGNNCC 1 cut(s) 493
BspPI GGATC 1 cut(s) 1008
BspQI GCTCTTC 1 cut(s) 97
BspT107I GGYRCC 1 cut(s) 491
BspTNI GGTCTC 1 cut(s) 74
BsrDI GCAATG 2 cut(s) 839, 1003
BsrFI RCCGGY 1 cut(s) 1116
BsrI ACTGG 2 cut(s) 340, 1255
BssAI RCCGGY 1 cut(s) 1116
BssECI CCNNGG 1 cut(s) 1366
BssMI GATC 5 cut(s) 667, 786, 1000, 1029, 1173
BssT1I CCWWGG 1 cut(s) 1366
Bst4CI ACNGT 2 cut(s) 620, 852
Bst6I CTCTTC 2 cut(s) 97, 1164
BstAPI GCANNNNNTGC 1 cut(s) 584
BstC8I GCNNGC 1 cut(s) 1351
BstDEI CTNAG 4 cut(s) 57, 813, 859, 1058
BstF5I GGATG 6 cut(s) 16, 448, 589, 993, 1309, 1318
BstFNI CGCG 1 cut(s) 109
BstHHI GCGC 1 cut(s) 109
BstKTI GATC 5 cut(s) 670, 789, 1003, 1032, 1176
BstMAI GTCTC 4 cut(s) 74, 83, 986, 1291
BstMBI GATC 5 cut(s) 667, 786, 1000, 1029, 1173
BstMWI GCNNNNNNNGC 3 cut(s) 104, 584, 1325
BstPAI GACNNNNGTC 1 cut(s) 621
BstSCI CCNGG 1 cut(s) 873
BstUI CGCG 1 cut(s) 109
BstV1I GCAGC 1 cut(s) 939
BstV2I GAAGAC 2 cut(s) 188, 222
BstXI CCANNNNNNTGG 1 cut(s) 922
BsuRI GGCC 1 cut(s) 754
BtrI CACGTC 1 cut(s) 715
BtsCI GGATG 6 cut(s) 16, 448, 589, 993, 1309, 1318
BtsI GCAGTG 1 cut(s) 1344
BtsIMutI CAGTG 3 cut(s) 848, 1248, 1344
Cac8I GCNNGC 1 cut(s) 1351
CciI TCATGA 1 cut(s) 79
CfoI GCGC 1 cut(s) 109
Cfr10I RCCGGY 1 cut(s) 1116
CseI GACGC 1 cut(s) 98
Csp6I GTAC 4 cut(s) 267, 492, 1091, 1405
CspAI ACCGGT 1 cut(s) 1116
CviAII CATG 6 cut(s) 80, 205, 262, 469, 665, 885
CviQI GTAC 4 cut(s) 267, 492, 1091, 1405
DdeI CTNAG 4 cut(s) 57, 813, 859, 1058
DpnI GATC 5 cut(s) 669, 788, 1002, 1031, 1175
DpnII GATC 5 cut(s) 667, 786, 1000, 1029, 1173
DraI TTTAAA 1 cut(s) 898
EaeI YGGCCR 1 cut(s) 752
Eam1104I CTCTTC 2 cut(s) 97, 1164
EarI CTCTTC 2 cut(s) 97, 1164
Ecl136II GAGCTC 1 cut(s) 454
Eco130I CCWWGG 1 cut(s) 1366
Eco24I GRGCYC 1 cut(s) 456
Eco31I GGTCTC 1 cut(s) 74
Eco53kI GAGCTC 1 cut(s) 454
Eco57I CTGAAG 2 cut(s) 240, 843
EcoICRI GAGCTC 1 cut(s) 454
EcoRI GAATTC 2 cut(s) 39, 968
EcoT14I CCWWGG 1 cut(s) 1366
EcoT22I ATGCAT 2 cut(s) 589, 666
EcoT38I GRGCYC 1 cut(s) 456
ErhI CCWWGG 1 cut(s) 1366
FaeI CATG 6 cut(s) 83, 208, 265, 472, 668, 888
FatI CATG 6 cut(s) 79, 204, 261, 468, 664, 884
Fnu4HI GCNGC 1 cut(s) 953
FokI GGATG 6 cut(s) 23, 455, 596, 1000, 1316, 1325
FriOI GRGCYC 1 cut(s) 456
Fsp4HI GCNGC 1 cut(s) 953
FspBI CTAG 8 cut(s) 95, 245, 632, 702, 794, 933, 1373, 1442
GlaI GCGC 1 cut(s) 108
GluI GCNGC 1 cut(s) 953
GsuI CTGGAG 1 cut(s) 1149
HaeIII GGCC 1 cut(s) 754
HapII CCGG 2 cut(s) 874, 1117
HgaI GACGC 1 cut(s) 98
HhaI GCGC 1 cut(s) 109
Hin1II CATG 6 cut(s) 83, 208, 265, 472, 668, 888
Hin6I GCGC 1 cut(s) 107
HinP1I GCGC 1 cut(s) 107
HindIII AAGCTT 1 cut(s) 1073
HinfI GANTC 5 cut(s) 22, 91, 1134, 1269, 1435
HpaII CCGG 2 cut(s) 874, 1117
HphI GGTGA 2 cut(s) 350, 1181
Hpy166II GTNNAC 2 cut(s) 242, 269
Hpy188I TCNGA 4 cut(s) 35, 358, 1029, 1034
Hpy188III TCNNGA 8 cut(s) 80, 234, 702, 794, 821, 965, 985, 1432
Hpy8I GTNNAC 2 cut(s) 242, 269
Hpy99I CGWCG 1 cut(s) 114
HpyAV CCTTC 1 cut(s) 966
HpyCH4III ACNGT 2 cut(s) 620, 852
HpyCH4IV ACGT 1 cut(s) 714
HpyCH4V TGCA 9 cut(s) 204, 587, 664, 780, 832, 888, 1008, 1160, 1328
HpyF10VI GCNNNNNNNGC 3 cut(s) 104, 584, 1325
HpyF3I CTNAG 4 cut(s) 57, 813, 859, 1058
HpySE526I ACGT 1 cut(s) 714
Hsp92II CATG 6 cut(s) 83, 208, 265, 472, 668, 888
HspAI GCGC 1 cut(s) 107
KpnI GGTACC 1 cut(s) 495
Kzo9I GATC 5 cut(s) 667, 786, 1000, 1029, 1173
LguI GCTCTTC 1 cut(s) 97
LmnI GCTCC 2 cut(s) 451, 1341
Lsp1109I GCAGC 1 cut(s) 939
LweI GCATC 2 cut(s) 39, 574
MaeI CTAG 8 cut(s) 95, 245, 632, 702, 794, 933, 1373, 1442
MaeII ACGT 1 cut(s) 714
MaeIII GTNAC 3 cut(s) 119, 428, 1021
MalI GATC 5 cut(s) 669, 788, 1002, 1031, 1175
MboI GATC 5 cut(s) 667, 786, 1000, 1029, 1173
MboII GAAGA 7 cut(s) 48, 114, 188, 222, 340, 1181, 1223
MhlI GDGCHC 1 cut(s) 456
MlsI TGGCCA 1 cut(s) 754
MluNI TGGCCA 1 cut(s) 754
MlyI GAGTC 2 cut(s) 85, 1143
MmeI TCCRAC 1 cut(s) 903
MnlI CCTC 8 cut(s) 294, 442, 568, 1117, 1124, 1197, 1352, 1405
Mox20I TGGCCA 1 cut(s) 754
Mph1103I ATGCAT 2 cut(s) 589, 666
MscI TGGCCA 1 cut(s) 754
MseI TTAA 8 cut(s) 128, 324, 420, 507, 551, 897, 929, 1113
Msp20I TGGCCA 1 cut(s) 754
MspI CCGG 2 cut(s) 874, 1117
MspR9I CCNGG 1 cut(s) 875
Mva1269I GAATGC 1 cut(s) 666
MvnI CGCG 1 cut(s) 109
MwoI GCNNNNNNNGC 3 cut(s) 104, 584, 1325
NciI CCSGG 1 cut(s) 875
NdeII GATC 5 cut(s) 667, 786, 1000, 1029, 1173
NlaIII CATG 6 cut(s) 83, 208, 265, 472, 668, 888
NlaIV GGNNCC 1 cut(s) 493
NsiI ATGCAT 2 cut(s) 589, 666
PagI TCATGA 1 cut(s) 79
PciSI GCTCTTC 1 cut(s) 97
PctI GAATGC 1 cut(s) 666
PfeI GAWTC 3 cut(s) 22, 1269, 1435
PfoI TCCNGGA 1 cut(s) 873
PinAI ACCGGT 1 cut(s) 1116
PkrI GCNGC 1 cut(s) 954
PleI GAGTC 2 cut(s) 85, 1142
PpsI GAGTC 2 cut(s) 85, 1142
PshAI GACNNNNGTC 1 cut(s) 621
Psp124BI GAGCTC 1 cut(s) 456
PspN4I GGNNCC 1 cut(s) 493
RsaI GTAC 4 cut(s) 268, 493, 1092, 1406
RsaNI GTAC 4 cut(s) 267, 492, 1091, 1405
SacI GAGCTC 1 cut(s) 456
SapI GCTCTTC 1 cut(s) 97
SaqAI TTAA 8 cut(s) 128, 324, 420, 507, 551, 897, 929, 1113
SatI GCNGC 1 cut(s) 953
Sau3AI GATC 5 cut(s) 667, 786, 1000, 1029, 1173
ScaI AGTACT 1 cut(s) 1092
SchI GAGTC 2 cut(s) 85, 1143
ScrFI CCNGG 1 cut(s) 875
SduI GDGCHC 1 cut(s) 456
SfaNI GCATC 2 cut(s) 39, 574
SmlI CTYRAG 1 cut(s) 455
SmoI CTYRAG 1 cut(s) 455
SpeI ACTAGT 1 cut(s) 244
SsiI CCGC 1 cut(s) 1197
SspI AATATT 1 cut(s) 222
SspMI CTAG 8 cut(s) 95, 245, 632, 702, 794, 933, 1373, 1442
SstI GAGCTC 1 cut(s) 456
StyD4I CCNGG 1 cut(s) 873
StyI CCWWGG 1 cut(s) 1366
TaaI ACNGT 2 cut(s) 620, 852
TaiI ACGT 1 cut(s) 717
TaqI TCGA 4 cut(s) 235, 399, 561, 596
TatI WGTACW 2 cut(s) 1090, 1404
TfiI GAWTC 3 cut(s) 22, 1269, 1435
Tru1I TTAA 8 cut(s) 128, 324, 420, 507, 551, 897, 929, 1113
Tru9I TTAA 8 cut(s) 128, 324, 420, 507, 551, 897, 929, 1113
TscAI CASTG 3 cut(s) 855, 1255, 1351
TseI GCWGC 1 cut(s) 952
TspDTI ATGAA 9 cut(s) 63, 68, 96, 457, 777, 882, 920, 948, 1329
TspRI CASTG 3 cut(s) 855, 1255, 1351
XapI RAATTY 5 cut(s) 39, 352, 764, 968, 1053
XbaI TCTAGA 2 cut(s) 701, 793
XspI CTAG 8 cut(s) 95, 245, 632, 702, 794, 933, 1373, 1442
ZrmI AGTACT 1 cut(s) 1092
Zsp2I ATGCAT 2 cut(s) 589, 666
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.