Rh7CG217200

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0000042
Physical Location & Seq
Forward (+)
19792855 .. 19794556
1702 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG217200.1

Sequence Viewer

Length: 1482 bp
ATGGAGATTCTTGCTGCAATTGCCGGAAAACTTGCCGAGTTCACAGTTGCACCAATTGGACGTCAAGTGGGTTATCTAGCTCACCACAAAAGCAACCATCAAAATCTGCAGACCAAATTGGAGGACTTAAGTGCTGCCAGGGATGAGGTTCAACATAAGGTTGATCAATTTAGGAGAGGAGGTAAACGAATCGAGACTACTGTTCTGAACTGGAAGACAAGAGTGGATGCAATCATCACAGAGTCAGAGGAATTCCTGAGAGACGGCCGCCATGCACAGACCGAGTGTCTTCATGGTTTTTGTCCGCATTTGGTGCTCCGTTATCAACTAAGCAGGAAGTCAGCAAAATTGGTGGAGAAGATTAATGAACTTTATGGAAAGAAGGAGTTCTCCAACTTTGCATATGATGTTCTTCCACAAGATTTATGTCTTTTATCTACCAGGCATTACAGTACATTCGATTCAAGGAATTCAGTTGTTTTGAGAGTCATGGATGAACTGAGAAATCCTAATACAGAAATGATTCTGGTGTGGGGAATCGGTGGGGTAGGGAAGACCACACTCGTTGAAGAAGTTCTTAGGCAAGCTAAGGATGTTAACTTATTTGATGATTTGGTGATGGTGAGAGCTGTGAAAGAGTACTCAGACCTTGAAAAAATTCAGAAAGAAATTGCCATGAAGTTGGGTATGAGCATTGACAAAGATCAGACTCTAGCTGAAAGAGCGCTCCTTCTTGGTCATAGGATAATACAGAAGAGGACTCTTGTAGTTTTAGACGATGTTTGGGAAGAAATTGATCTACTGGCTGTAGGAGTCCCCTGCCTGGTGAACCTTAAAGTATTGTTGACATGTAGAAGCCGAAAGGAGTTATCATTGGATATGCGTACACAAAAAGATATTCTGGTTGATGTTTTAAATGAAGAGGAAGCATGGAGTTTATTTGATAAGATGGCTGGCGATGTTGTTAAAGATAGCCGCATACAAAGCATAGCAATTGAAGTAGCAAAAAACTGTGGAGGTTTGCCGGTCTTGATTGTTACGGTTGCAAGAGCTCTAAAAGACAGGAACAATATTCGTGCATGGAGAGACACCTTGAGACGGCTTGGAGGCTTTGACAACAAAGAATTTACAGAAAAAGCATACTTGGCTCTGGAGTGGAGTTACGATCAATTGGAAGATAAAGAGCTTAAACCGTTGTTCTTGCTTTGTGGGATTATTGCAGTTAAGAACCATATTTATTTGGCAGACCTGTTGAAATATAGTTTTGTTTTGGGTTTGATAAAAAATGTCTATACAATAGAAGAAGCACGAGATGCATTAGATCCACTGGTTGAAAAGCTTAAAGATTCTTGCTTGTTGCGGGACAGTGATATCAATATGCATGTTAGAATGCATGATCTTGTATGTGAGGTTGCCTTACGGATTGCATCCAGAGATCAACATGTCTTATCAATTGGTCAATTGGATATGGAAGTGAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

493

Amino Acids

56.31

Weight (kDa)

6.16

Isoelectric Point (pI)

44.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 160 - 319 1.2e-25 NB-ARC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 64
AciI CCGC 4 cut(s) 268, 305, 976, 1360
AclWI GGATC 1 cut(s) 1316
AcoI YGGCCR 1 cut(s) 265
AcsI RAATTY 4 cut(s) 251, 469, 657, 1124
AcyI GRCGYC 1 cut(s) 61
AfaI GTAC 3 cut(s) 454, 641, 886
AfeI AGCGCT 1 cut(s) 726
AfiI CCNNNNNNNGG 2 cut(s) 823, 1098
AflII CTTAAG 1 cut(s) 127
AflIII ACRYGT 2 cut(s) 848, 1441
AgsI TTSAA 7 cut(s) 152, 465, 569, 653, 998, 1255, 1334
AhdI GACNNNNNGTC 1 cut(s) 285
AjnI CCWGG 3 cut(s) 137, 440, 822
AluBI AGCT 7 cut(s) 80, 587, 629, 716, 1052, 1186, 1339
AluI AGCT 7 cut(s) 80, 587, 629, 716, 1052, 1186, 1339
Alw21I GWGCWC 2 cut(s) 318, 1054
Alw26I GTCTC 4 cut(s) 188, 255, 1080, 1090
AlwI GGATC 1 cut(s) 1316
Aor51HI AGCGCT 1 cut(s) 726
AoxI GGCC 1 cut(s) 265
ApeKI GCWGC 2 cut(s) 14, 134
ApoI RAATTY 4 cut(s) 251, 469, 657, 1124
AseI ATTAAT 1 cut(s) 363
Asp700I GAANNNNTTC 4 cut(s) 386, 522, 573, 657
AspLEI GCGC 1 cut(s) 727
AsuHPI GGTGA 4 cut(s) 74, 628, 634, 838
BanII GRGCYC 1 cut(s) 1054
BauI CACGAG 1 cut(s) 1308
BbsI GAAGAC 3 cut(s) 221, 281, 560
Bbv12I GWGCWC 2 cut(s) 318, 1054
BbvI GCAGC 1 cut(s) 121
BccI CCATC 3 cut(s) 105, 613, 943
BceAI ACGGC 2 cut(s) 280, 1115
BciT130I CCWGG 3 cut(s) 139, 442, 824
BclI TGATCA 1 cut(s) 163
BcoDI GTCTC 4 cut(s) 188, 255, 1080, 1090
BfaI CTAG 2 cut(s) 77, 713
BfmI CTRYAG 2 cut(s) 107, 807
BfoI RGCGCY 1 cut(s) 728
BfrI CTTAAG 1 cut(s) 127
BisI GCNGC 4 cut(s) 15, 135, 268, 976
BlsI GCNGC 4 cut(s) 16, 136, 269, 977
BmcAI AGTACT 1 cut(s) 641
Bme1390I CCNGG 3 cut(s) 139, 442, 824
BmeRI GACNNNNNGTC 1 cut(s) 285
BmrFI CCNGG 3 cut(s) 139, 442, 824
BmsI GCATC 3 cut(s) 217, 1303, 1436
BpiI GAAGAC 3 cut(s) 221, 281, 560
BpmI CTGGAG 1 cut(s) 1172
Bpu10I CCTNAGC 1 cut(s) 588
BpuEI CTTGAG 1 cut(s) 1114
BsaHI GRCGYC 1 cut(s) 61
BsaJI CCNNGG 1 cut(s) 138
BsaXI ACNNNNNCTCC 2 cut(s) 166, 196
Bsc4I CCNNNNNNNGG 2 cut(s) 823, 1098
Bse118I RCCGGY 1 cut(s) 1024
Bse1I ACTGG 3 cut(s) 215, 807, 1332
BseBI CCWGG 3 cut(s) 139, 442, 824
BseDI CCNNGG 1 cut(s) 138
BseGI GGATG 5 cut(s) 148, 232, 499, 598, 1427
BseLI CCNNNNNNNGG 2 cut(s) 823, 1098
BseMII CTCAG 3 cut(s) 248, 491, 657
BseNI ACTGG 3 cut(s) 215, 807, 1332
BseRI GAGGAG 1 cut(s) 192
BseX3I CGGCCG 1 cut(s) 265
BseXI GCAGC 1 cut(s) 121
Bsh1285I CGRYCG 1 cut(s) 268
BshFI GGCC 1 cut(s) 267
BsiEI CGRYCG 1 cut(s) 268
BsiHKAI GWGCWC 2 cut(s) 318, 1054
BsiSI CCGG 2 cut(s) 24, 1025
BslFI GGGAC 2 cut(s) 800, 1376
BslI CCNNNNNNNGG 2 cut(s) 823, 1098
BsmAI GTCTC 4 cut(s) 188, 255, 1080, 1090
BsmBI CGTCTC 2 cut(s) 255, 1090
BsmFI GGGAC 2 cut(s) 800, 1376
BsmI GAATGC 1 cut(s) 1395
BsnI GGCC 1 cut(s) 267
Bsp1286I GDGCHC 2 cut(s) 318, 1054
Bsp143I GATC 7 cut(s) 163, 703, 796, 1165, 1321, 1396, 1435
BspACI CCGC 4 cut(s) 268, 305, 976, 1360
BspANI GGCC 1 cut(s) 267
BspCNI CTCAG 3 cut(s) 249, 492, 656
BspMAI CTGCAG 1 cut(s) 111
BspPI GGATC 1 cut(s) 1316
BspTI CTTAAG 1 cut(s) 127
BsrFI RCCGGY 1 cut(s) 1024
BsrI ACTGG 3 cut(s) 215, 807, 1332
BssAI RCCGGY 1 cut(s) 1024
BssECI CCNNGG 1 cut(s) 138
BssMI GATC 7 cut(s) 163, 703, 796, 1165, 1321, 1396, 1435
BssNI GRCGYC 1 cut(s) 61
BssSI CACGAG 1 cut(s) 1308
Bst2BI CACGAG 1 cut(s) 1308
Bst2UI CCWGG 3 cut(s) 139, 442, 824
Bst4CI ACNGT 7 cut(s) 46, 202, 452, 1013, 1042, 1194, 1367
Bst6I CTCTTC 2 cut(s) 749, 915
BstACI GRCGYC 1 cut(s) 61
BstAFI CTTAAG 1 cut(s) 127
BstAPI GCANNNNNTGC 2 cut(s) 313, 1313
BstC8I GCNNGC 2 cut(s) 585, 955
BstDEI CTNAG 6 cut(s) 257, 329, 500, 578, 588, 643
BstF5I GGATG 5 cut(s) 148, 232, 499, 598, 1427
BstH2I RGCGCY 1 cut(s) 728
BstHHI GCGC 1 cut(s) 727
BstKTI GATC 7 cut(s) 166, 706, 799, 1168, 1324, 1399, 1438
BstMAI GTCTC 4 cut(s) 188, 255, 1080, 1090
BstMBI GATC 7 cut(s) 163, 703, 796, 1165, 1321, 1396, 1435
BstMCI CGRYCG 1 cut(s) 268
BstMWI GCNNNNNNNGC 6 cut(s) 20, 313, 722, 984, 1145, 1313
BstNI CCWGG 3 cut(s) 139, 442, 824
BstNSI RCATGY 3 cut(s) 852, 1385, 1445
BstSCI CCNGG 3 cut(s) 137, 440, 822
BstSFI CTRYAG 2 cut(s) 107, 807
BstV1I GCAGC 1 cut(s) 121
BstV2I GAAGAC 3 cut(s) 221, 281, 560
BstX2I RGATCY 1 cut(s) 1321
BstXI CCANNNNNNTGG 1 cut(s) 682
BstYI RGATCY 1 cut(s) 1321
BstZI CGGCCG 1 cut(s) 265
BsuRI GGCC 1 cut(s) 267
BtgZI GCGATG 1 cut(s) 972
BtsCI GGATG 5 cut(s) 148, 232, 499, 598, 1427
BtsIMutI CAGTG 2 cut(s) 1325, 1372
Cac8I GCNNGC 2 cut(s) 585, 955
CfoI GCGC 1 cut(s) 727
Cfr10I RCCGGY 1 cut(s) 1024
Csp6I GTAC 3 cut(s) 453, 640, 885
CspCI CAANNNNNGTGG 4 cut(s) 333, 368, 547, 582
CviQI GTAC 3 cut(s) 453, 640, 885
DdeI CTNAG 6 cut(s) 257, 329, 500, 578, 588, 643
DpnI GATC 7 cut(s) 165, 705, 798, 1167, 1323, 1398, 1437
DpnII GATC 7 cut(s) 163, 703, 796, 1165, 1321, 1396, 1435
DraI TTTAAA 1 cut(s) 915
DriI GACNNNNNGTC 1 cut(s) 285
EaeI YGGCCR 1 cut(s) 265
EagI CGGCCG 1 cut(s) 265
Eam1104I CTCTTC 2 cut(s) 749, 915
Eam1105I GACNNNNNGTC 1 cut(s) 285
EarI CTCTTC 2 cut(s) 749, 915
Ecl136II GAGCTC 1 cut(s) 1052
EclXI CGGCCG 1 cut(s) 265
Eco24I GRGCYC 1 cut(s) 1054
Eco32I GATATC 1 cut(s) 1372
Eco47III AGCGCT 1 cut(s) 726
Eco52I CGGCCG 1 cut(s) 265
Eco53kI GAGCTC 1 cut(s) 1052
EcoICRI GAGCTC 1 cut(s) 1052
EcoRI GAATTC 2 cut(s) 251, 469
EcoRII CCWGG 3 cut(s) 137, 440, 822
EcoRV GATATC 1 cut(s) 1372
EcoT22I ATGCAT 3 cut(s) 1318, 1383, 1395
EcoT38I GRGCYC 1 cut(s) 1054
Esp3I CGTCTC 2 cut(s) 255, 1090
FalI AAGNNNNNCTT 2 cut(s) 561, 593
FaqI GGGAC 2 cut(s) 800, 1376
FauI CCCGC 1 cut(s) 1353
FauNDI CATATG 1 cut(s) 403
FbaI TGATCA 1 cut(s) 163
Fnu4HI GCNGC 4 cut(s) 15, 135, 268, 976
FokI GGATG 5 cut(s) 155, 239, 506, 605, 1414
FriOI GRGCYC 1 cut(s) 1054
Fsp4HI GCNGC 4 cut(s) 15, 135, 268, 976
FspBI CTAG 2 cut(s) 77, 713
GlaI GCGC 1 cut(s) 726
GluI GCNGC 4 cut(s) 15, 135, 268, 976
GsuI CTGGAG 1 cut(s) 1172
HaeII RGCGCY 1 cut(s) 728
HaeIII GGCC 1 cut(s) 267
HapII CCGG 2 cut(s) 24, 1025
HhaI GCGC 1 cut(s) 727
Hin1I GRCGYC 1 cut(s) 61
Hin6I GCGC 1 cut(s) 725
HinP1I GCGC 1 cut(s) 725
HincII GTYRAC 2 cut(s) 598, 846
HindII GTYRAC 2 cut(s) 598, 846
HindIII AAGCTT 1 cut(s) 1337
HpaI GTTAAC 1 cut(s) 598
HpaII CCGG 2 cut(s) 24, 1025
HphI GGTGA 4 cut(s) 74, 628, 634, 838
Hpy166II GTNNAC 7 cut(s) 42, 185, 598, 829, 846, 887, 1477
Hpy188I TCNGA 5 cut(s) 207, 247, 646, 663, 708
Hpy188III TCNNGA 5 cut(s) 193, 256, 1030, 1151, 1431
Hpy8I GTNNAC 7 cut(s) 42, 185, 598, 829, 846, 887, 1477
HpyAV CCTTC 2 cut(s) 376, 740
HpyCH4III ACNGT 7 cut(s) 46, 202, 452, 1013, 1042, 1194, 1367
HpyCH4IV ACGT 1 cut(s) 61
HpyF10VI GCNNNNNNNGC 6 cut(s) 20, 313, 722, 984, 1145, 1313
HpyF3I CTNAG 6 cut(s) 257, 329, 500, 578, 588, 643
HpySE526I ACGT 1 cut(s) 61
Hsp92I GRCGYC 1 cut(s) 61
HspAI GCGC 1 cut(s) 725
Ksp22I TGATCA 1 cut(s) 163
KspAI GTTAAC 1 cut(s) 598
Kzo9I GATC 7 cut(s) 163, 703, 796, 1165, 1321, 1396, 1435
LmnI GCTCC 2 cut(s) 321, 732
Lsp1109I GCAGC 1 cut(s) 121
LweI GCATC 3 cut(s) 217, 1303, 1436
MaeI CTAG 2 cut(s) 77, 713
MaeII ACGT 1 cut(s) 61
MaeIII GTNAC 2 cut(s) 1036, 1160
MalI GATC 7 cut(s) 165, 705, 798, 1167, 1323, 1398, 1437
MboI GATC 7 cut(s) 163, 703, 796, 1165, 1321, 1396, 1435
MfeI CAATTG 6 cut(s) 18, 54, 993, 1169, 1452, 1460
MflI RGATCY 1 cut(s) 1321
MhlI GDGCHC 2 cut(s) 318, 1054
MlyI GAGTC 5 cut(s) 251, 495, 703, 754, 822
MmeI TCCRAC 1 cut(s) 417
Mph1103I ATGCAT 3 cut(s) 1318, 1383, 1395
MroXI GAANNNNTTC 4 cut(s) 386, 522, 573, 657
MseI TTAA 9 cut(s) 128, 363, 597, 834, 914, 966, 1188, 1224, 1341
MspCI CTTAAG 1 cut(s) 127
MspI CCGG 2 cut(s) 24, 1025
MspR9I CCNGG 3 cut(s) 139, 442, 824
MunI CAATTG 6 cut(s) 18, 54, 993, 1169, 1452, 1460
Mva1269I GAATGC 1 cut(s) 1395
MvaI CCWGG 3 cut(s) 139, 442, 824
MwoI GCNNNNNNNGC 6 cut(s) 20, 313, 722, 984, 1145, 1313
NdeI CATATG 1 cut(s) 403
NdeII GATC 7 cut(s) 163, 703, 796, 1165, 1321, 1396, 1435
NmeAIII GCCGAG 1 cut(s) 61
NsiI ATGCAT 3 cut(s) 1318, 1383, 1395
NspI RCATGY 3 cut(s) 852, 1385, 1445
PciI ACATGT 2 cut(s) 848, 1441
PctI GAATGC 1 cut(s) 1395
PdmI GAANNNNTTC 4 cut(s) 386, 522, 573, 657
PfeI GAWTC 6 cut(s) 7, 189, 461, 523, 537, 1346
PkrI GCNGC 4 cut(s) 16, 136, 269, 977
PleI GAGTC 5 cut(s) 250, 494, 703, 754, 821
PpsI GAGTC 5 cut(s) 250, 494, 703, 754, 821
PscI ACATGT 2 cut(s) 848, 1441
PshBI ATTAAT 1 cut(s) 363
Psp124BI GAGCTC 1 cut(s) 1054
Psp6I CCWGG 3 cut(s) 137, 440, 822
PspGI CCWGG 3 cut(s) 137, 440, 822
PstI CTGCAG 1 cut(s) 111
PsuI RGATCY 1 cut(s) 1321
RsaI GTAC 3 cut(s) 454, 641, 886
RsaNI GTAC 3 cut(s) 453, 640, 885
SacI GAGCTC 1 cut(s) 1054
SaqAI TTAA 9 cut(s) 128, 363, 597, 834, 914, 966, 1188, 1224, 1341
SatI GCNGC 4 cut(s) 15, 135, 268, 976
Sau3AI GATC 7 cut(s) 163, 703, 796, 1165, 1321, 1396, 1435
ScaI AGTACT 1 cut(s) 641
SchI GAGTC 5 cut(s) 251, 495, 703, 754, 822
ScrFI CCNGG 3 cut(s) 139, 442, 824
SduI GDGCHC 2 cut(s) 318, 1054
SfaNI GCATC 3 cut(s) 217, 1303, 1436
SfcI CTRYAG 2 cut(s) 107, 807
SmlI CTYRAG 2 cut(s) 127, 1093
SmoI CTYRAG 2 cut(s) 127, 1093
SsiI CCGC 4 cut(s) 268, 305, 976, 1360
SspI AATATT 1 cut(s) 1072
SspMI CTAG 2 cut(s) 77, 713
SstI GAGCTC 1 cut(s) 1054
StyD4I CCNGG 3 cut(s) 137, 440, 822
TaaI ACNGT 7 cut(s) 46, 202, 452, 1013, 1042, 1194, 1367
TaiI ACGT 1 cut(s) 64
TaqI TCGA 2 cut(s) 192, 459
TaqII GACCGA 1 cut(s) 296
TatI WGTACW 2 cut(s) 452, 639
TauI GCSGC 2 cut(s) 270, 978
TfiI GAWTC 6 cut(s) 7, 189, 461, 523, 537, 1346
Tru1I TTAA 9 cut(s) 128, 363, 597, 834, 914, 966, 1188, 1224, 1341
Tru9I TTAA 9 cut(s) 128, 363, 597, 834, 914, 966, 1188, 1224, 1341
TscAI CASTG 2 cut(s) 1332, 1372
TseI GCWGC 2 cut(s) 14, 134
TspDTI ATGAA 5 cut(s) 281, 381, 510, 692, 933
TspGWI ACGGA 2 cut(s) 308, 1435
TspRI CASTG 2 cut(s) 1332, 1372
Vha464I CTTAAG 1 cut(s) 127
VspI ATTAAT 1 cut(s) 363
XapI RAATTY 4 cut(s) 251, 469, 657, 1124
XceI RCATGY 3 cut(s) 852, 1385, 1445
XmnI GAANNNNTTC 4 cut(s) 386, 522, 573, 657
XspI CTAG 2 cut(s) 77, 713
ZraI GACGTC 1 cut(s) 62
ZrmI AGTACT 1 cut(s) 641
Zsp2I ATGCAT 3 cut(s) 1318, 1383, 1395
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.