Rmu_sc0023640.1_g000001

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0023640.1
OG0000042
Physical Location & Seq
Forward (+)
131 .. 1864
1734 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0023640.1_g000001.1.cds

Sequence Viewer

Length: 1452 bp
atggaatttctcggagatgagactatagacagaagagcttgtcgtctttgtcatatgataaaagacaagaaagttctggaaattttggatgacatacaagaaaaagttgatttggagattttgggacttccacgggtgcccaattgtaaactattgttgacatctagaatcagagaagtattatcggttgagatgcgtatacaaaaggagtttcaacttgaccttttaaatgcagaagaaaactggagtttatttgagaagatggcaggtgaagttgttcaaaattccgccatacgagaagtagcaatacaagtcgcgcaaaagtgcagaggcttgccggttttagtggagcttaagccattgttcttgctttctggaattatgaggggttactctatatgtcttcttgacttgttgaaatatagtatgggcttgggtttgattaaaaacgtggatacactagaagaagcacaggatgcattgcattcactggttgaaaaacttaaagattgttgtctgttgctagaggacagtgatgataataaacttgtcagaatgcatgaccttgttcatgaagttgtaaaccggatagccttgagagatcaatacgttttcaaagttgctattggagatgagttcaaagaatggctagctaaggatttttgtacaaagtgcactatgatcattctcaaaagatgcagtatcccccatcttcctgaaggtttggaatgtccagaactgaaaatgtttatattttctagtagggatgctgatcactacttggaaattcctaacaactttttcgaatggatgaagaaactcaaagtgttggacttcactaggttgagtatcccatctctaccttcatcacttgaattcctagaaagtcttcggacgttgtgtttggatcaatgcacattgggagatgtaactcttatcagacagctacaaaacttggaaattcttagctttcaagaatccaaattcaaagagttgcccaaagaaatagggcaattgactcgtctgcgattgttggatttgaatggttgctctcaactcgaagtgatttcacctaatgttatatcaaacttgaaaaggttagaaaacttgagaatggcagatttgttcaccactagtaagttagagagattccaaatatgtattggttctacttggaaatgggataatatggatgaagccctcaatgcactaaagctccagctcactgccagcaatgaattggaccaaggcctaagaatgttgctgaaaagagctcaagacttgtacttggaggggacggagggtgttaataatagtattgtatatcaaataggtgctgaaggttttcagaaattgaagcatctccatctccaaacgaattccgagtttatgtatatcataaatgggaaggtgcgctccttcatttgtttcaattttgtcatcatattataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

483

Amino Acids

55.72

Weight (kDa)

5.53

Isoelectric Point (pI)

33.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1450
AarI CACCTGC 1 cut(s) 257
Acc36I ACCTGC 1 cut(s) 257
AccB1I GGYRCC 1 cut(s) 136
AccI GTMKAC 1 cut(s) 199
AccII CGCG 1 cut(s) 317
AciI CCGC 1 cut(s) 288
AclWI GGATC 1 cut(s) 915
AcsI RAATTY 8 cut(s) 5, 81, 283, 786, 875, 960, 983, 1378
AcuI CTGAAG 2 cut(s) 738, 1359
AfaI GTAC 2 cut(s) 667, 1286
AflII CTTAAG 1 cut(s) 353
AhlI ACTAGT 1 cut(s) 1133
AluBI AGCT 8 cut(s) 38, 352, 653, 946, 969, 1216, 1222, 1274
AluI AGCT 8 cut(s) 38, 352, 653, 946, 969, 1216, 1222, 1274
Alw21I GWGCWC 2 cut(s) 677, 1276
Alw26I GTCTC 1 cut(s) 14
Alw44I GTGCAC 1 cut(s) 673
AlwI GGATC 1 cut(s) 915
AoxI GGCC 1 cut(s) 1249
ApaLI GTGCAC 1 cut(s) 673
ApoI RAATTY 8 cut(s) 5, 81, 283, 786, 875, 960, 983, 1378
ArsI GACNNNNNNTTYG 2 cut(s) 886, 918
Asp700I GAANNNNTTC 3 cut(s) 276, 888, 1344
AspLEI GCGC 2 cut(s) 319, 1416
AspS9I GGNCC 1 cut(s) 1243
AsuHPI GGTGA 3 cut(s) 281, 1062, 1120
AsuII TTCGAA 1 cut(s) 804
AsuNHI GCTAGC 1 cut(s) 649
AvaII GGWCC 1 cut(s) 1243
BaeGI GKGCMC 2 cut(s) 141, 677
BanI GGYRCC 1 cut(s) 136
BanII GRGCYC 1 cut(s) 1276
BarI GAAGNNNNNNTAC 2 cut(s) 291, 323
BbsI GAAGAC 2 cut(s) 395, 881
Bbv12I GWGCWC 2 cut(s) 677, 1276
BccI CCATC 4 cut(s) 256, 717, 862, 1374
BcgI CGANNNNNNTGC 2 cut(s) 1001, 1035
BciVI GTATCC 3 cut(s) 448, 713, 860
BclI TGATCA 2 cut(s) 681, 772
BcoDI GTCTC 1 cut(s) 14
BcuI ACTAGT 1 cut(s) 1133
BfaI CTAG 8 cut(s) 165, 461, 524, 650, 759, 840, 881, 1134
BfmI CTRYAG 1 cut(s) 24
BfrI CTTAAG 1 cut(s) 353
BfuAI ACCTGC 1 cut(s) 257
BfuI GTATCC 3 cut(s) 448, 713, 860
Bme18I GGWCC 1 cut(s) 1243
BmgT120I GGNCC 1 cut(s) 1243
BmiI GGNNCC 1 cut(s) 138
BmsI GCATC 5 cut(s) 183, 466, 686, 757, 1369
BmtI GCTAGC 1 cut(s) 653
BpiI GAAGAC 2 cut(s) 395, 881
BpmI CTGGAG 2 cut(s) 265, 1202
Bpu10I CCTNAGC 1 cut(s) 654
Bpu14I TTCGAA 1 cut(s) 804
BpuEI CTTGAG 3 cut(s) 616, 1129, 1260
BsaBI GATNNNNATC 1 cut(s) 771
BsaJI CCNNGG 2 cut(s) 131, 1246
BsaWI WCCGGW 1 cut(s) 585
BsaXI ACNNNNNCTCC 2 cut(s) 1200, 1230
Bse118I RCCGGY 1 cut(s) 337
Bse1I ACTGG 2 cut(s) 248, 495
Bse3DI GCAATG 2 cut(s) 479, 1240
Bse8I GATNNNNATC 1 cut(s) 771
BseDI CCNNGG 2 cut(s) 131, 1246
BseGI GGATG 5 cut(s) 94, 481, 772, 816, 1198
BseJI GATNNNNATC 1 cut(s) 771
BseMI GCAATG 2 cut(s) 479, 1240
BseNI ACTGG 2 cut(s) 248, 495
BseSI GKGCMC 2 cut(s) 141, 677
BsgI GTGCAG 1 cut(s) 346
Bsh1236I CGCG 1 cut(s) 317
BshFI GGCC 1 cut(s) 1251
BshNI GGYRCC 1 cut(s) 136
BsiHKAI GWGCWC 2 cut(s) 677, 1276
BsiSI CCGG 2 cut(s) 338, 586
BslFI GGGAC 2 cut(s) 138, 1309
BsmAI GTCTC 1 cut(s) 14
BsmFI GGGAC 2 cut(s) 138, 1309
BsmI GAATGC 2 cut(s) 484, 561
BsnI GGCC 1 cut(s) 1251
Bsp119I TTCGAA 1 cut(s) 804
Bsp1286I GDGCHC 3 cut(s) 141, 677, 1276
Bsp1407I TGTACA 1 cut(s) 665
Bsp143I GATC 4 cut(s) 601, 681, 772, 907
BspACI CCGC 1 cut(s) 288
BspANI GGCC 1 cut(s) 1251
BspFNI CGCG 1 cut(s) 317
BspHI TCATGA 1 cut(s) 571
BspLI GGNNCC 1 cut(s) 138
BspMI ACCTGC 1 cut(s) 257
BspOI GCTAGC 1 cut(s) 653
BspPI GGATC 1 cut(s) 915
BspQI GCTCTTC 1 cut(s) 28
BspT104I TTCGAA 1 cut(s) 804
BspT107I GGYRCC 1 cut(s) 136
BspTI CTTAAG 1 cut(s) 353
BsrDI GCAATG 2 cut(s) 479, 1240
BsrFI RCCGGY 1 cut(s) 337
BsrGI TGTACA 1 cut(s) 665
BsrI ACTGG 2 cut(s) 248, 495
BssAI RCCGGY 1 cut(s) 337
BssECI CCNNGG 2 cut(s) 131, 1246
BssMI GATC 4 cut(s) 601, 681, 772, 907
BssNAI GTATAC 1 cut(s) 200
BssT1I CCWWGG 1 cut(s) 1246
Bst1107I GTATAC 1 cut(s) 200
Bst4CI ACNGT 1 cut(s) 533
Bst6I CTCTTC 1 cut(s) 28
BstAFI CTTAAG 1 cut(s) 353
BstAPI GCANNNNNTGC 1 cut(s) 476
BstAUI TGTACA 1 cut(s) 665
BstBI TTCGAA 1 cut(s) 804
BstC8I GCNNGC 3 cut(s) 335, 651, 1231
BstDEI CTNAG 3 cut(s) 654, 965, 1253
BstDSI CCRYGG 1 cut(s) 131
BstF5I GGATG 5 cut(s) 94, 481, 772, 816, 1198
BstFNI CGCG 1 cut(s) 317
BstHHI GCGC 2 cut(s) 319, 1416
BstKTI GATC 4 cut(s) 604, 684, 775, 910
BstMAI GTCTC 1 cut(s) 14
BstMBI GATC 4 cut(s) 601, 681, 772, 907
BstMWI GCNNNNNNNGC 2 cut(s) 476, 1205
BstSFI CTRYAG 1 cut(s) 24
BstSLI GKGCMC 2 cut(s) 141, 677
BstUI CGCG 1 cut(s) 317
BstV2I GAAGAC 2 cut(s) 395, 881
BstZ17I GTATAC 1 cut(s) 200
BsuI GTATCC 3 cut(s) 448, 713, 860
BsuRI GGCC 1 cut(s) 1251
BtgI CCRYGG 1 cut(s) 131
BtsCI GGATG 5 cut(s) 94, 481, 772, 816, 1198
BtsI GCAGTG 1 cut(s) 1224
BtsIMutI CAGTG 3 cut(s) 488, 538, 1224
BveI ACCTGC 1 cut(s) 257
Cac8I GCNNGC 3 cut(s) 335, 651, 1231
CciI TCATGA 1 cut(s) 571
CfoI GCGC 2 cut(s) 319, 1416
Cfr10I RCCGGY 1 cut(s) 337
Cfr13I GGNCC 1 cut(s) 1243
Csp6I GTAC 2 cut(s) 666, 1285
CviAII CATG 2 cut(s) 560, 572
CviQI GTAC 2 cut(s) 666, 1285
DdeI CTNAG 3 cut(s) 654, 965, 1253
DpnI GATC 4 cut(s) 603, 683, 774, 909
DpnII GATC 4 cut(s) 601, 681, 772, 907
DraI TTTAAA 1 cut(s) 228
Eam1104I CTCTTC 1 cut(s) 28
EarI CTCTTC 1 cut(s) 28
EciI GGCGGA 1 cut(s) 277
Ecl136II GAGCTC 1 cut(s) 1274
Eco130I CCWWGG 1 cut(s) 1246
Eco147I AGGCCT 1 cut(s) 1251
Eco24I GRGCYC 1 cut(s) 1276
Eco47I GGWCC 1 cut(s) 1243
Eco53kI GAGCTC 1 cut(s) 1274
Eco57I CTGAAG 2 cut(s) 738, 1359
EcoICRI GAGCTC 1 cut(s) 1274
EcoRI GAATTC 2 cut(s) 875, 1378
EcoT14I CCWWGG 1 cut(s) 1246
EcoT22I ATGCAT 2 cut(s) 481, 561
EcoT38I GRGCYC 1 cut(s) 1276
ErhI CCWWGG 1 cut(s) 1246
FaeI CATG 2 cut(s) 563, 575
FaqI GGGAC 2 cut(s) 138, 1309
FatI CATG 2 cut(s) 559, 571
FauNDI CATATG 1 cut(s) 54
FbaI TGATCA 2 cut(s) 681, 772
FblI GTMKAC 1 cut(s) 199
FokI GGATG 5 cut(s) 101, 488, 779, 823, 1205
FriOI GRGCYC 1 cut(s) 1276
FspBI CTAG 8 cut(s) 165, 461, 524, 650, 759, 840, 881, 1134
GlaI GCGC 2 cut(s) 318, 1415
GsuI CTGGAG 2 cut(s) 265, 1202
HaeIII GGCC 1 cut(s) 1251
HapII CCGG 2 cut(s) 338, 586
HhaI GCGC 2 cut(s) 319, 1416
Hin1II CATG 2 cut(s) 563, 575
Hin6I GCGC 2 cut(s) 317, 1414
HinP1I GCGC 2 cut(s) 317, 1414
HincII GTYRAC 1 cut(s) 159
HindII GTYRAC 1 cut(s) 159
HinfI GANTC 4 cut(s) 168, 977, 1018, 1149
HpaII CCGG 2 cut(s) 338, 586
HphI GGTGA 3 cut(s) 281, 1062, 1120
Hpy166II GTNNAC 6 cut(s) 149, 159, 200, 583, 675, 1128
Hpy188I TCNGA 7 cut(s) 14, 173, 554, 894, 941, 1350, 1384
Hpy188III TCNNGA 9 cut(s) 77, 165, 375, 407, 572, 716, 734, 974, 1277
Hpy8I GTNNAC 6 cut(s) 149, 159, 200, 583, 675, 1128
HpyAV CCTTC 5 cut(s) 713, 873, 1334, 1402, 1429
HpyCH4III ACNGT 1 cut(s) 533
HpyCH4IV ACGT 3 cut(s) 450, 609, 896
HpyCH4V TGCA 9 cut(s) 233, 327, 479, 484, 559, 675, 699, 915, 1208
HpyF10VI GCNNNNNNNGC 2 cut(s) 476, 1205
HpyF3I CTNAG 3 cut(s) 654, 965, 1253
HpySE526I ACGT 3 cut(s) 450, 609, 896
Hsp92II CATG 2 cut(s) 563, 575
HspAI GCGC 2 cut(s) 317, 1414
Ksp22I TGATCA 2 cut(s) 681, 772
Kzo9I GATC 4 cut(s) 601, 681, 772, 907
LguI GCTCTTC 1 cut(s) 28
LmnI GCTCC 3 cut(s) 349, 1221, 1421
LweI GCATC 5 cut(s) 183, 466, 686, 757, 1369
MaeI CTAG 8 cut(s) 165, 461, 524, 650, 759, 840, 881, 1134
MaeII ACGT 3 cut(s) 450, 609, 896
MaeIII GTNAC 2 cut(s) 389, 928
MalI GATC 4 cut(s) 603, 683, 774, 909
MboI GATC 4 cut(s) 601, 681, 772, 907
MboII GAAGA 8 cut(s) 45, 248, 271, 395, 476, 704, 826, 881
MfeI CAATTG 2 cut(s) 142, 1013
MhlI GDGCHC 3 cut(s) 141, 677, 1276
MlyI GAGTC 1 cut(s) 1012
MmeI TCCRAC 2 cut(s) 810, 1014
MnlI CCTC 6 cut(s) 323, 378, 520, 1211, 1285, 1294
Mph1103I ATGCAT 2 cut(s) 481, 561
MroXI GAANNNNTTC 3 cut(s) 276, 888, 1344
MseI TTAA 5 cut(s) 227, 354, 444, 504, 1308
MspCI CTTAAG 1 cut(s) 353
MspI CCGG 2 cut(s) 338, 586
MunI CAATTG 2 cut(s) 142, 1013
Mva1269I GAATGC 2 cut(s) 484, 561
MvnI CGCG 1 cut(s) 317
MwoI GCNNNNNNNGC 2 cut(s) 476, 1205
NdeI CATATG 1 cut(s) 54
NdeII GATC 4 cut(s) 601, 681, 772, 907
NheI GCTAGC 1 cut(s) 649
NlaIII CATG 2 cut(s) 563, 575
NlaIV GGNNCC 1 cut(s) 138
NsiI ATGCAT 2 cut(s) 481, 561
NspV TTCGAA 1 cut(s) 804
PagI TCATGA 1 cut(s) 571
PaqCI CACCTGC 1 cut(s) 257
PceI AGGCCT 1 cut(s) 1251
PciSI GCTCTTC 1 cut(s) 28
PctI GAATGC 2 cut(s) 484, 561
PdmI GAANNNNTTC 3 cut(s) 276, 888, 1344
PfeI GAWTC 3 cut(s) 168, 977, 1149
PleI GAGTC 1 cut(s) 1012
PpsI GAGTC 1 cut(s) 1012
PsiI TTATAA 1 cut(s) 1450
Psp124BI GAGCTC 1 cut(s) 1276
PspN4I GGNNCC 1 cut(s) 138
PspPI GGNCC 1 cut(s) 1243
RsaI GTAC 2 cut(s) 667, 1286
RsaNI GTAC 2 cut(s) 666, 1285
SacI GAGCTC 1 cut(s) 1276
SapI GCTCTTC 1 cut(s) 28
SaqAI TTAA 5 cut(s) 227, 354, 444, 504, 1308
Sau3AI GATC 4 cut(s) 601, 681, 772, 907
Sau96I GGNCC 1 cut(s) 1243
SchI GAGTC 1 cut(s) 1012
SduI GDGCHC 3 cut(s) 141, 677, 1276
SfaNI GCATC 5 cut(s) 183, 466, 686, 757, 1369
SfcI CTRYAG 1 cut(s) 24
SfuI TTCGAA 1 cut(s) 804
SinI GGWCC 1 cut(s) 1243
SmlI CTYRAG 4 cut(s) 353, 595, 1108, 1275
SmoI CTYRAG 4 cut(s) 353, 595, 1108, 1275
SpeI ACTAGT 1 cut(s) 1133
SseBI AGGCCT 1 cut(s) 1251
SsiI CCGC 1 cut(s) 288
SspMI CTAG 8 cut(s) 165, 461, 524, 650, 759, 840, 881, 1134
SstI GAGCTC 1 cut(s) 1276
StuI AGGCCT 1 cut(s) 1251
StyI CCWWGG 1 cut(s) 1246
TaaI ACNGT 1 cut(s) 533
TaiI ACGT 3 cut(s) 453, 612, 899
TaqI TCGA 2 cut(s) 804, 1059
TatI WGTACW 2 cut(s) 665, 1284
TfiI GAWTC 3 cut(s) 168, 977, 1149
Tru1I TTAA 5 cut(s) 227, 354, 444, 504, 1308
Tru9I TTAA 5 cut(s) 227, 354, 444, 504, 1308
TscAI CASTG 3 cut(s) 495, 538, 1231
TspDTI ATGAA 7 cut(s) 560, 588, 827, 855, 1209, 1251, 1411
TspGWI ACGGA 1 cut(s) 1313
TspRI CASTG 3 cut(s) 495, 538, 1231
Vha464I CTTAAG 1 cut(s) 353
VneI GTGCAC 1 cut(s) 673
VpaK11BI GGWCC 1 cut(s) 1243
XapI RAATTY 8 cut(s) 5, 81, 283, 786, 875, 960, 983, 1378
XbaI TCTAGA 1 cut(s) 164
XcmI CCANNNNNNNNNTGG 2 cut(s) 1160, 1237
XmiI GTMKAC 1 cut(s) 199
XmnI GAANNNNTTC 3 cut(s) 276, 888, 1344
XspI CTAG 8 cut(s) 165, 461, 524, 650, 759, 840, 881, 1134
Zsp2I ATGCAT 2 cut(s) 481, 561
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.