disease resistance
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NB-ARC | PF00931 | 158 - 321 | 3.9e-26 | NB-ARC domain |
| LRR_14 | PF23598 | 593 - 862 | 4.6e-06 | Leucine-rich repeat region |
| LRR_RPS2 | PF23247 | 778 - 906 | 4.5e-14 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
| LRR_RPS2 | PF23247 | 947 - 1013 | 6e-13 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
| LRR_RPS2 | PF23247 | 952 - 1029 | 5.6e-14 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
| LRR_RPS2 | PF23247 | 1038 - 1148 | 8e-14 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
| LRR_RPS2 | PF23247 | 1189 - 1315 | 6.5e-12 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
| LRR_RPS2 | PF23247 | 1320 - 1420 | 3.4e-08 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 3719 |
| AarI | CACCTGC | 1 cut(s) | 950 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 822, 1379 |
| AatII | GACGTC | 2 cut(s) | 473, 969 |
| Acc36I | ACCTGC | 1 cut(s) | 950 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2308 |
| AccI | GTMKAC | 3 cut(s) | 52, 988, 3096 |
| AccII | CGCG | 1 cut(s) | 3817 |
| AccIII | TCCGGA | 2 cut(s) | 3966, 4205 |
| AclWI | GGATC | 2 cut(s) | 3046, 3360 |
| AcoI | YGGCCR | 4 cut(s) | 1490, 1780, 3204, 3401 |
| AcuI | CTGAAG | 5 cut(s) | 186, 1581, 2039, 2277, 2687 |
| AcyI | GRCGYC | 3 cut(s) | 61, 470, 966 |
| AdeI | CACNNNGTG | 1 cut(s) | 1916 |
| AfaI | GTAC | 6 cut(s) | 29, 1566, 2478, 2811, 3408, 3769 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 1012, 1159, 1866, 2308, 3550 |
| AflIII | ACRYGT | 3 cut(s) | 1450, 3091, 3915 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 200, 2762 |
| AhlI | ACTAGT | 1 cut(s) | 1336 |
| AjnI | CCWGG | 4 cut(s) | 1088, 1152, 3009, 3862 |
| Alw21I | GWGCWC | 1 cut(s) | 3658 |
| Alw44I | GTGCAC | 1 cut(s) | 3654 |
| AlwI | GGATC | 2 cut(s) | 3046, 3360 |
| Ama87I | CYCGRG | 3 cut(s) | 114, 861, 2913 |
| Aor13HI | TCCGGA | 2 cut(s) | 3966, 4205 |
| AoxI | GGCC | 6 cut(s) | 1490, 1780, 3204, 3401, 3808, 4412 |
| ApaLI | GTGCAC | 1 cut(s) | 3654 |
| ApeKI | GCWGC | 2 cut(s) | 134, 4159 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 3453, 3485 |
| AseI | ATTAAT | 2 cut(s) | 2292, 2379 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 660, 1593, 2147 |
| AspLEI | GCGC | 1 cut(s) | 1159 |
| AspS9I | GGNCC | 3 cut(s) | 3590, 3808, 4412 |
| AsuC2I | CCSGG | 1 cut(s) | 3772 |
| AsuHPI | GGTGA | 9 cut(s) | 194, 239, 974, 1405, 1487, 1902, 1945, 2000, 3284 |
| AvaI | CYCGRG | 3 cut(s) | 114, 861, 2913 |
| AvaII | GGWCC | 1 cut(s) | 3590 |
| BaeGI | GKGCMC | 1 cut(s) | 3658 |
| BalI | TGGCCA | 3 cut(s) | 1492, 1782, 3403 |
| BauI | CACGAG | 1 cut(s) | 4295 |
| BbsI | GAAGAC | 6 cut(s) | 959, 1856, 2265, 3206, 3561, 4260 |
| Bbv12I | GWGCWC | 1 cut(s) | 3658 |
| BbvI | GCAGC | 2 cut(s) | 121, 4171 |
| BccI | CCATC | 9 cut(s) | 330, 469, 517, 1363, 1379, 1639, 1702, 3785, 3995 |
| BceAI | ACGGC | 2 cut(s) | 972, 4395 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1992, 2026, 2696, 2730 |
| BciT130I | CCWGG | 4 cut(s) | 1090, 1154, 3011, 3864 |
| BciVI | GTATCC | 1 cut(s) | 2509 |
| BcnI | CCSGG | 1 cut(s) | 3772 |
| BcuI | ACTAGT | 1 cut(s) | 1336 |
| BfmI | CTRYAG | 3 cut(s) | 107, 714, 3163 |
| BfoI | RGCGCY | 1 cut(s) | 1160 |
| BfuAI | ACCTGC | 1 cut(s) | 950 |
| BfuI | GTATCC | 1 cut(s) | 2509 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 3203 |
| BglII | AGATCT | 2 cut(s) | 1524, 1612 |
| BisI | GCNGC | 3 cut(s) | 135, 3456, 4160 |
| BlsI | GCNGC | 3 cut(s) | 136, 3457, 4161 |
| BmcAI | AGTACT | 1 cut(s) | 3408 |
| Bme1390I | CCNGG | 5 cut(s) | 1090, 1154, 3011, 3772, 3864 |
| Bme18I | GGWCC | 1 cut(s) | 3590 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 200, 2762 |
| BmeT110I | CYCGRG | 3 cut(s) | 114, 861, 2913 |
| BmgT120I | GGNCC | 3 cut(s) | 3590, 3808, 4412 |
| BmiI | GGNNCC | 2 cut(s) | 645, 3809 |
| BmrFI | CCNGG | 5 cut(s) | 1090, 1154, 3011, 3772, 3864 |
| BmrI | ACTGGG | 2 cut(s) | 65, 3391 |
| BmuI | ACTGGG | 2 cut(s) | 65, 3391 |
| BpiI | GAAGAC | 6 cut(s) | 959, 1856, 2265, 3206, 3561, 4260 |
| BpmI | CTGGAG | 5 cut(s) | 462, 1181, 2173, 3674, 3965 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1188 |
| BpuEI | CTTGAG | 4 cut(s) | 2180, 2918, 3821, 4084 |
| BpuMI | CCSGG | 1 cut(s) | 3772 |
| BsaHI | GRCGYC | 3 cut(s) | 61, 470, 966 |
| BsaJI | CCNNGG | 5 cut(s) | 292, 2655, 3009, 3771, 3863 |
| BsaWI | WCCGGW | 3 cut(s) | 1428, 3966, 4205 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 3292, 3322, 4281, 4311 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 1012, 1159, 1866, 2308, 3550 |
| Bse3DI | GCAATG | 1 cut(s) | 1697 |
| BseAI | TCCGGA | 2 cut(s) | 3966, 4205 |
| BseBI | CCWGG | 4 cut(s) | 1090, 1154, 3011, 3864 |
| BseDI | CCNNGG | 5 cut(s) | 292, 2655, 3009, 3771, 3863 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 1012, 1159, 1866, 2308, 3550 |
| BseMI | GCAATG | 1 cut(s) | 1697 |
| BseMII | CTCAG | 5 cut(s) | 15, 2045, 2852, 3213, 4374 |
| BseRI | GAGGAG | 4 cut(s) | 558, 3300, 4376, 4379 |
| BseSI | GKGCMC | 1 cut(s) | 3658 |
| BseXI | GCAGC | 2 cut(s) | 121, 4171 |
| BseYI | CCCAGC | 1 cut(s) | 3193 |
| BsgI | GTGCAG | 1 cut(s) | 1537 |
| Bsh1236I | CGCG | 1 cut(s) | 3817 |
| BshFI | GGCC | 6 cut(s) | 1492, 1782, 3206, 3403, 3810, 4414 |
| BsiHKAI | GWGCWC | 1 cut(s) | 3658 |
| BsiHKCI | CYCGRG | 3 cut(s) | 114, 861, 2913 |
| BsiSI | CCGG | 5 cut(s) | 1429, 3207, 3771, 3967, 4206 |
| BslFI | GGGAC | 4 cut(s) | 72, 828, 2141, 3044 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 1012, 1159, 1866, 2308, 3550 |
| BsmBI | CGTCTC | 3 cut(s) | 137, 2270, 3475 |
| BsmFI | GGGAC | 4 cut(s) | 72, 828, 2141, 3044 |
| BsmI | GAATGC | 3 cut(s) | 1404, 2549, 3010 |
| BsnI | GGCC | 6 cut(s) | 1492, 1782, 3206, 3403, 3810, 4414 |
| BsoBI | CYCGRG | 3 cut(s) | 114, 861, 2913 |
| Bsp1286I | GDGCHC | 1 cut(s) | 3658 |
| Bsp13I | TCCGGA | 2 cut(s) | 3966, 4205 |
| Bsp1407I | TGTACA | 2 cut(s) | 2476, 2809 |
| Bsp19I | CCATGG | 1 cut(s) | 292 |
| BspANI | GGCC | 6 cut(s) | 1492, 1782, 3206, 3403, 3810, 4414 |
| BspCNI | CTCAG | 5 cut(s) | 16, 2044, 2853, 3212, 4375 |
| BspEI | TCCGGA | 2 cut(s) | 3966, 4205 |
| BspFNI | CGCG | 1 cut(s) | 3817 |
| BspHI | TCATGA | 1 cut(s) | 3112 |
| BspLI | GGNNCC | 2 cut(s) | 645, 3809 |
| BspMI | ACCTGC | 1 cut(s) | 950 |
| BspPI | GGATC | 2 cut(s) | 3046, 3360 |
| BspQI | GCTCTTC | 1 cut(s) | 718 |
| BsrDI | GCAATG | 1 cut(s) | 1697 |
| BsrGI | TGTACA | 2 cut(s) | 2476, 2809 |
| BssECI | CCNNGG | 5 cut(s) | 292, 2655, 3009, 3771, 3863 |
| BssNAI | GTATAC | 1 cut(s) | 989 |
| BssNI | GRCGYC | 3 cut(s) | 61, 470, 966 |
| BssSI | CACGAG | 1 cut(s) | 4295 |
| BssT1I | CCWWGG | 2 cut(s) | 292, 2655 |
| Bst1107I | GTATAC | 1 cut(s) | 989 |
| Bst2BI | CACGAG | 1 cut(s) | 4295 |
| Bst2UI | CCWGG | 4 cut(s) | 1090, 1154, 3011, 3864 |
| Bst4CI | ACNGT | 7 cut(s) | 223, 316, 372, 1051, 1306, 1964, 2357 |
| Bst6I | CTCTTC | 7 cut(s) | 718, 1716, 2243, 2766, 2772, 3273, 3422 |
| BstACI | GRCGYC | 3 cut(s) | 61, 470, 966 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1322 |
| BstAUI | TGTACA | 2 cut(s) | 2476, 2809 |
| BstC8I | GCNNGC | 5 cut(s) | 891, 2005, 3600, 3672, 4416 |
| BstDSI | CCRYGG | 1 cut(s) | 292 |
| BstFNI | CGCG | 1 cut(s) | 3817 |
| BstH2I | RGCGCY | 1 cut(s) | 1160 |
| BstHHI | GCGC | 1 cut(s) | 1159 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 1154, 1322, 1699, 3203, 4168 |
| BstNI | CCWGG | 4 cut(s) | 1090, 1154, 3011, 3864 |
| BstNSI | RCATGY | 4 cut(s) | 1454, 2903, 3095, 3392 |
| BstSCI | CCNGG | 5 cut(s) | 1088, 1152, 3009, 3770, 3862 |
| BstSFI | CTRYAG | 3 cut(s) | 107, 714, 3163 |
| BstSLI | GKGCMC | 1 cut(s) | 3658 |
| BstUI | CGCG | 1 cut(s) | 3817 |
| BstV1I | GCAGC | 2 cut(s) | 121, 4171 |
| BstV2I | GAAGAC | 6 cut(s) | 959, 1856, 2265, 3206, 3561, 4260 |
| BstX2I | RGATCY | 3 cut(s) | 1524, 1612, 3352 |
| BstYI | RGATCY | 3 cut(s) | 1524, 1612, 3352 |
| BstZ17I | GTATAC | 1 cut(s) | 989 |
| BsuI | GTATCC | 1 cut(s) | 2509 |
| BsuRI | GGCC | 6 cut(s) | 1492, 1782, 3206, 3403, 3810, 4414 |
| BtgI | CCRYGG | 1 cut(s) | 292 |
| BtgZI | GCGATG | 2 cut(s) | 1392, 2721 |
| BtsI | GCAGTG | 2 cut(s) | 82, 234 |
| BtsIMutI | CAGTG | 7 cut(s) | 82, 234, 1311, 1890, 2186, 3207, 3404 |
| BveI | ACCTGC | 1 cut(s) | 950 |
| Cac8I | GCNNGC | 5 cut(s) | 891, 2005, 3600, 3672, 4416 |
| CciI | TCATGA | 1 cut(s) | 3112 |
| CfoI | GCGC | 1 cut(s) | 1159 |
| Cfr13I | GGNCC | 3 cut(s) | 3590, 3808, 4412 |
| CseI | GACGC | 2 cut(s) | 69, 2602 |
| Csp6I | GTAC | 6 cut(s) | 28, 1565, 2477, 2810, 3407, 3768 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2067, 2102 |
| CviQI | GTAC | 6 cut(s) | 28, 1565, 2477, 2810, 3407, 3768 |
| DraI | TTTAAA | 2 cut(s) | 1065, 1510 |
| DraIII | CACNNNGTG | 1 cut(s) | 1916 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 822, 1379 |
| DriI | GACNNNNNGTC | 2 cut(s) | 200, 2762 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 822, 1379 |
| EaeI | YGGCCR | 4 cut(s) | 1490, 1780, 3204, 3401 |
| Eam1104I | CTCTTC | 7 cut(s) | 718, 1716, 2243, 2766, 2772, 3273, 3422 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 200, 2762 |
| EarI | CTCTTC | 7 cut(s) | 718, 1716, 2243, 2766, 2772, 3273, 3422 |
| EciI | GGCGGA | 2 cut(s) | 308, 2970 |
| Eco130I | CCWWGG | 2 cut(s) | 292, 2655 |
| Eco32I | GATATC | 2 cut(s) | 2374, 2566 |
| Eco47I | GGWCC | 1 cut(s) | 3590 |
| Eco57I | CTGAAG | 5 cut(s) | 186, 1581, 2039, 2277, 2687 |
| Eco88I | CYCGRG | 3 cut(s) | 114, 861, 2913 |
| EcoO109I | RGGNCCY | 2 cut(s) | 3808, 4412 |
| EcoRI | GAATTC | 2 cut(s) | 1589, 2696 |
| EcoRII | CCWGG | 4 cut(s) | 1088, 1152, 3009, 3862 |
| EcoRV | GATATC | 2 cut(s) | 2374, 2566 |
| EcoT14I | CCWWGG | 2 cut(s) | 292, 2655 |
| EcoT22I | ATGCAT | 4 cut(s) | 1327, 1404, 1689, 3861 |
| ErhI | CCWWGG | 2 cut(s) | 292, 2655 |
| Esp3I | CGTCTC | 3 cut(s) | 137, 2270, 3475 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 1490, 1522, 2769, 2801, 3732, 3764 |
| FaqI | GGGAC | 4 cut(s) | 72, 828, 2141, 3044 |
| FauI | CCCGC | 2 cut(s) | 1093, 3822 |
| FauNDI | CATATG | 2 cut(s) | 1689, 3952 |
| FblI | GTMKAC | 3 cut(s) | 52, 988, 3096 |
| Fnu4HI | GCNGC | 3 cut(s) | 135, 3456, 4160 |
| Fsp4HI | GCNGC | 3 cut(s) | 135, 3456, 4160 |
| GlaI | GCGC | 1 cut(s) | 1158 |
| GluI | GCNGC | 3 cut(s) | 135, 3456, 4160 |
| GsaI | CCCAGC | 1 cut(s) | 3197 |
| GsuI | CTGGAG | 5 cut(s) | 462, 1181, 2173, 3674, 3965 |
| HaeII | RGCGCY | 1 cut(s) | 1160 |
| HaeIII | GGCC | 6 cut(s) | 1492, 1782, 3206, 3403, 3810, 4414 |
| HapII | CCGG | 5 cut(s) | 1429, 3207, 3771, 3967, 4206 |
| HgaI | GACGC | 2 cut(s) | 69, 2602 |
| HhaI | GCGC | 1 cut(s) | 1159 |
| Hin1I | GRCGYC | 3 cut(s) | 61, 470, 966 |
| Hin6I | GCGC | 1 cut(s) | 1157 |
| HinP1I | GCGC | 1 cut(s) | 1157 |
| HincII | GTYRAC | 3 cut(s) | 849, 3097, 3507 |
| HindII | GTYRAC | 3 cut(s) | 849, 3097, 3507 |
| HindIII | AAGCTT | 5 cut(s) | 1727, 1927, 2848, 3672, 4039 |
| HpaI | GTTAAC | 1 cut(s) | 849 |
| HpaII | CCGG | 5 cut(s) | 1429, 3207, 3771, 3967, 4206 |
| HphI | GGTGA | 9 cut(s) | 194, 239, 974, 1405, 1487, 1902, 1945, 2000, 3284 |
| Hpy99I | CGWCG | 1 cut(s) | 2216 |
| HpyCH4III | ACNGT | 7 cut(s) | 223, 316, 372, 1051, 1306, 1964, 2357 |
| HpyCH4IV | ACGT | 6 cut(s) | 470, 966, 1419, 2130, 2211, 3915 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 1154, 1322, 1699, 3203, 4168 |
| HpySE526I | ACGT | 6 cut(s) | 470, 966, 1419, 2130, 2211, 3915 |
| Hsp92I | GRCGYC | 3 cut(s) | 61, 470, 966 |
| HspAI | GCGC | 1 cut(s) | 1157 |
| Kpn2I | TCCGGA | 2 cut(s) | 3966, 4205 |
| KspAI | GTTAAC | 1 cut(s) | 849 |
| LguI | GCTCTTC | 1 cut(s) | 718 |
| LmnI | GCTCC | 5 cut(s) | 643, 1192, 2014, 4168, 4208 |
| Lsp1109I | GCAGC | 2 cut(s) | 121, 4171 |
| MaeII | ACGT | 6 cut(s) | 470, 966, 1419, 2130, 2211, 3915 |
| MaeIII | GTNAC | 9 cut(s) | 433, 962, 1045, 1080, 1169, 1415, 2407, 3926, 4297 |
| MfeI | CAATTG | 7 cut(s) | 474, 1853, 2306, 3119, 3255, 3416, 3727 |
| MflI | RGATCY | 3 cut(s) | 1524, 1612, 3352 |
| MhlI | GDGCHC | 1 cut(s) | 3658 |
| MlsI | TGGCCA | 3 cut(s) | 1492, 1782, 3403 |
| MluNI | TGGCCA | 3 cut(s) | 1492, 1782, 3403 |
| MlyI | GAGTC | 8 cut(s) | 1349, 2340, 2912, 2925, 3901, 3949, 3956, 4299 |
| MmeI | TCCRAC | 6 cut(s) | 25, 1659, 1854, 2326, 2368, 2929 |
| Mox20I | TGGCCA | 3 cut(s) | 1492, 1782, 3403 |
| Mph1103I | ATGCAT | 4 cut(s) | 1327, 1404, 1689, 3861 |
| MroI | TCCGGA | 2 cut(s) | 3966, 4205 |
| MroXI | GAANNNNTTC | 3 cut(s) | 660, 1593, 2147 |
| MscI | TGGCCA | 3 cut(s) | 1492, 1782, 3403 |
| MslI | CAYNNNNRTG | 2 cut(s) | 2427, 3789 |
| Msp20I | TGGCCA | 3 cut(s) | 1492, 1782, 3403 |
| MspI | CCGG | 5 cut(s) | 1429, 3207, 3771, 3967, 4206 |
| MspR9I | CCNGG | 5 cut(s) | 1090, 1154, 3011, 3772, 3864 |
| MunI | CAATTG | 7 cut(s) | 474, 1853, 2306, 3119, 3255, 3416, 3727 |
| Mva1269I | GAATGC | 3 cut(s) | 1404, 2549, 3010 |
| MvaI | CCWGG | 4 cut(s) | 1090, 1154, 3011, 3864 |
| MvnI | CGCG | 1 cut(s) | 3817 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 1154, 1322, 1699, 3203, 4168 |
| NciI | CCSGG | 1 cut(s) | 3772 |
| NcoI | CCATGG | 1 cut(s) | 292 |
| NdeI | CATATG | 2 cut(s) | 1689, 3952 |
| NlaIV | GGNNCC | 2 cut(s) | 645, 3809 |
| NmuCI | GTSAC | 4 cut(s) | 962, 1045, 1415, 4297 |
| NsiI | ATGCAT | 4 cut(s) | 1327, 1404, 1689, 3861 |
| NspI | RCATGY | 4 cut(s) | 1454, 2903, 3095, 3392 |
| PaeR7I | CTCGAG | 3 cut(s) | 114, 861, 2913 |
| PagI | TCATGA | 1 cut(s) | 3112 |
| PaqCI | CACCTGC | 1 cut(s) | 950 |
| PciI | ACATGT | 2 cut(s) | 1450, 3091 |
| PciSI | GCTCTTC | 1 cut(s) | 718 |
| PctI | GAATGC | 3 cut(s) | 1404, 2549, 3010 |
| PdmI | GAANNNNTTC | 3 cut(s) | 660, 1593, 2147 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2308 |
| PkrI | GCNGC | 3 cut(s) | 136, 3457, 4161 |
| PleI | GAGTC | 8 cut(s) | 1349, 2340, 2912, 2925, 3901, 3948, 3955, 4298 |
| PpsI | GAGTC | 8 cut(s) | 1349, 2340, 2912, 2925, 3901, 3948, 3955, 4298 |
| PscI | ACATGT | 2 cut(s) | 1450, 3091 |
| PshBI | ATTAAT | 2 cut(s) | 2292, 2379 |
| PsiI | TTATAA | 1 cut(s) | 3719 |
| Psp6I | CCWGG | 4 cut(s) | 1088, 1152, 3009, 3862 |
| PspFI | CCCAGC | 1 cut(s) | 3193 |
| PspGI | CCWGG | 4 cut(s) | 1088, 1152, 3009, 3862 |
| PspN4I | GGNNCC | 2 cut(s) | 645, 3809 |
| PspPI | GGNCC | 3 cut(s) | 3590, 3808, 4412 |
| PspXI | VCTCGAGB | 1 cut(s) | 114 |
| PsuI | RGATCY | 3 cut(s) | 1524, 1612, 3352 |
| RsaI | GTAC | 6 cut(s) | 29, 1566, 2478, 2811, 3408, 3769 |
| RsaNI | GTAC | 6 cut(s) | 28, 1565, 2477, 2810, 3407, 3768 |
| RseI | CAYNNNNRTG | 2 cut(s) | 2427, 3789 |
| SalI | GTCGAC | 1 cut(s) | 3095 |
| SapI | GCTCTTC | 1 cut(s) | 718 |
| SatI | GCNGC | 3 cut(s) | 135, 3456, 4160 |
| Sau96I | GGNCC | 3 cut(s) | 3590, 3808, 4412 |
| ScaI | AGTACT | 1 cut(s) | 3408 |
| SchI | GAGTC | 8 cut(s) | 1349, 2340, 2912, 2925, 3901, 3949, 3956, 4299 |
| ScrFI | CCNGG | 5 cut(s) | 1090, 1154, 3011, 3772, 3864 |
| SduI | GDGCHC | 1 cut(s) | 3658 |
| SfcI | CTRYAG | 3 cut(s) | 107, 714, 3163 |
| Sfr274I | CTCGAG | 3 cut(s) | 114, 861, 2913 |
| SinI | GGWCC | 1 cut(s) | 3590 |
| SlaI | CTCGAG | 3 cut(s) | 114, 861, 2913 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 2427, 3789 |
| SmlI | CTYRAG | 7 cut(s) | 114, 861, 2195, 2913, 2933, 3836, 4099 |
| SmoI | CTYRAG | 7 cut(s) | 114, 861, 2195, 2913, 2933, 3836, 4099 |
| SpeI | ACTAGT | 1 cut(s) | 1336 |
| SspI | AATATT | 9 cut(s) | 514, 2116, 2296, 2321, 2816, 3960, 3990, 4013, 4401 |
| StyD4I | CCNGG | 5 cut(s) | 1088, 1152, 3009, 3770, 3862 |
| StyI | CCWWGG | 2 cut(s) | 292, 2655 |
| TaaI | ACNGT | 7 cut(s) | 223, 316, 372, 1051, 1306, 1964, 2357 |
| TaiI | ACGT | 6 cut(s) | 473, 969, 1422, 2133, 2214, 3918 |
| TaqII | GACCGA | 1 cut(s) | 3667 |
| TatI | WGTACW | 4 cut(s) | 27, 2476, 2809, 3406 |
| TauI | GCSGC | 1 cut(s) | 3458 |
| TscAI | CASTG | 7 cut(s) | 89, 241, 1311, 1897, 2193, 3207, 3404 |
| TseFI | GTSAC | 4 cut(s) | 962, 1045, 1415, 4297 |
| TseI | GCWGC | 2 cut(s) | 134, 4159 |
| Tsp45I | GTSAC | 4 cut(s) | 962, 1045, 1415, 4297 |
| TspGWI | ACGGA | 6 cut(s) | 2294, 2384, 3457, 3597, 3945, 4122 |
| TspRI | CASTG | 7 cut(s) | 89, 241, 1311, 1897, 2193, 3207, 3404 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2308 |
| VneI | GTGCAC | 1 cut(s) | 3654 |
| VpaK11BI | GGWCC | 1 cut(s) | 3590 |
| VspI | ATTAAT | 2 cut(s) | 2292, 2379 |
| XbaI | TCTAGA | 1 cut(s) | 3295 |
| XceI | RCATGY | 4 cut(s) | 1454, 2903, 3095, 3392 |
| XhoI | CTCGAG | 3 cut(s) | 114, 861, 2913 |
| XmiI | GTMKAC | 3 cut(s) | 52, 988, 3096 |
| XmnI | GAANNNNTTC | 3 cut(s) | 660, 1593, 2147 |
| ZraI | GACGTC | 2 cut(s) | 471, 967 |
| ZrmI | AGTACT | 1 cut(s) | 3408 |
| Zsp2I | ATGCAT | 4 cut(s) | 1327, 1404, 1689, 3861 |