Rh5DG122900

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
Physical Location & Seq
Forward (+)
11147590 .. 11159472
11883 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG122900.1

Sequence Viewer

Length: 4635 bp
ATGGAGTTGCTTTCAAAGTTTGTGGAGTATCCGATTGAACTTGTTGGACGTCTACTGGGACGCCAAGTGGGTTATGTAATTCACTGCAGAACCAACATTCAAAAGCTACAGGCTCGAGTGAAAGAATTGAAAGCTTCCAGACAGACGATAGAGGGTGAGGTTGCTGAAGCTAAAACAAGAGGTGAAAAAATCCGACCTGATGTCGAGTTGTGGCTGACAACAGTGGCCGAGATCACTGCAAAGACAGACGAATTGTTGAATGACGAAAGCCAAGCAAAGCTGAAATGCCTCCATGGCTTTTGTCCTAATCTGACTGTCCGTCATCAGATAAGCAGGAAATCAACAAAACTGGTTGAGGAGGTTGTTGAACAGTTTGGAAAAAAAGAATTTTCCCAAGTTTCGTGTGGTAATTTACGGAAGGAGGTATGGGACGTAACTACCGGAGATTACCAGGCCTTTGAATCAAGGATGTTAATTGTGAAGGACATCATGGATAGTCTGAAAGTCTCTGATATTCAGAGGATTGGGGTGTGTGGAATTGGAGGAGTGGGTAAAACCACATTGGTCAAACAAGTTTACAGGCACGCTTCAGAAGATAAACAGTTATTTGATAATGTGGTTATCCTATTAGATGTGAAAAGTAATCCAGACCCGGAAGCAATTCAAAAGAAAATTGTTGAGAAGTTGGGCATGGACATTCTTGATAAGGAAACGATAGACGGAAGAGCAAGCCGTCTATGTGCCAGGATACAAGGAAAAAACGTTCTTGTGATTTTGGATGATGTTCAAGAAAAAATGGATTTGGAGGTTGTGGGACTTCCTCGTCTGCCAACTTGTAAAATTTTGTTGACATGTAGAACTCGAGATGTTTTATCTTTTGATAAGATGCAGGCGGACAAAGTCTTTCAGCTTGATCTTTTAGGTAAAGAAGAAACTTGGAGTTTGTTTGTGAAGATGGCAGGTGACGTCATTAAACACGATAGTCATATTCGAGATGTAGCAATCCAAGTAGCCGAAAAATGTGGAGGTTTGCCCTTATTAATCATCACGGTTGCAAGTGCTTTAAAAGAGAGGAAAAAATTAGCCGCATGGAGAGATGCCTTAAGACAATTAAAAGGGTTTGACAGAGAAGATTCGACAGAAAAGCCATACCTGGCGCTAGAGTGGAGTTACAATCAATTAGATGATAAGGAGCTAAAACCATTGTTCTTGCTATGTGGAATCATGGCAGAGCAGAACCATATTTATAGGCAGTACCTGTTGATATATGGTATGGGTTTAGGTTTGTTTAAAAGAGTCTATACAGTGGAAGTAGCCCGGGATAGATTGGATTCACTACTTGAAAAACTTAAAGATTCTTGTTTGTTGATGGACAGTGATGTTGATGGAAAGGTGAGAATGCATGATCTTGTATGTCATGTTGCTAACCGGATTGCATATAGAGATCAGCACGTGCTATCAACAAAATTTGGAGACGAGTTGGTAGAATGGCCAAGTGAGGATTTCTTAAAGAAGTGCACTAAGATCTTTCTCTCGCACAACATAATTCCCACACTTCCTGAAGTTCCTTTGGACTGCCCAGAACTACAACTCCTTCTTATTCATAGTAAATATTACTCACAGGAAATTCCATCCAACTTTTTTAGCAAGATGCAGGAACTGAGAGTTCTGGATTTAACCCATATGTGTATGTCATCATTACCTGTATCTCTTCAATACTTGAAGAAGCTTAAAACGTTGTGTTTAGATGGATGCACATTGGGAGATATAACTCTACTTGGCCAGTTAAGTAGCTTGGAAATTCTTAGCTTTTTACAATCCAATGTTAGAGAATTGCCTAAAGAAATAGGGCAATTGACTCGTCTTCGGTTGTTGGATTTATGTGATTGCACTCAACTTGTAGTGATTTCACCTAGTGTTATATCAAGCTTGGTGAGACTGGAAGATTTGAGAATGAGAAACAGTTTTAACAAATGGGTGGTTGAAGGTGAAGGAAGTAATGCAAGCCTTTCGGAGCTGAAGCATTTGTCTCAGCTATCTGCATTAGAAATCCATATTCCCAATGTTGATGTTCTTCCACCAAACTTGTTCTCGCACAAGTTGGAAAGATTCAATATTTCTATTGGGGACGTATGGGTGCAGAAAGATTTCTGGAGGAAACTTATGGATAAGACGCACCTTAACACACTGGAACTCAAGCTCACTAACAACATCGAAGAATTGGATGAAGCTCTAAAATTGTTGCTGAAGAGAACTAAAGACTTGTCTTTAGATGAGACGGAGTGTGTTATTAGTATTGTCCAACAATTGGATGCCGAATATTTTGAGAATTTGAAACATCTCCGACTCCAAAACAGTATTGCCTTTACGGATATCATTAATCGGAAGGTTGTATTCCCCAACTTAGTAACCTTGATAGTGCATGGATGTGCTGATTTAAGACTTTTGCTCTCATTTTCTATGGCTAGAAGTCTTGTACAACTCACACATCTAAAGGTATCCGCTTGTGAACTCATGCAAGAGATTATATCATCAACAAGAGAATGCGATCAAGAAAATATGGATATCATCCTTTCCAAACTTAAAGTTTTGAAGCTTGATAAACTTCCAAACCTCGTTAGATTTAGCACAGGAAATCATATTGAATTTCCAGCCTTGGAAAAACTGAAGATAGAGGATTGTGATAAATTGCTGGAATTCATTAGCGATGAAGTTGCTATGAGAAGTGAACATAGTAGACTGTGCAAAGAAATTGGACAGGGGGTCTTGGAAGAGGAAGAGAACCTTGATATTAAGAGCGAGACTATTGTACAATATTTCCTCTTTGACAAAAAGGTAGGGTTTCCTAGCTTGGAGAGATTGATCATTGCCGGGGCAAGGGAGTTGAAGGCAATATGGCATGTCCAACTTGCTCGAGACTCTTTTCGGAGACTCAAGCAAGTAGATGTCCAGGAATGCAAAAATCTAGTAAGTTTGTTTCCGCCTAGTGTCATTGGAAGATTGAATGCCCTGGAAACCTTGAAGATATGGAGCTGCGGATCACTAGAAGTGATATTTGAATTACCGGGAAGAAGTAATGTTAAAGAAATACATGCCGACACATCATTCCCTCATGACCAGTTGAAACATTTTGATTGTCAAAATCTTGATTCAATAAACATATACGGGTGTCATAGTTTGAAACAGATTTTCCCAGCCTCAGTGGCCAGAGGTCTTCAAAACCTTACTCGGTTGGATGTGGACAAATGTGATGCAATTGAGGAAATTGTTGGTGAGGAAGAGGAAAAAGAAGGTCTAGAAACAATACCTCCTCATTTTGTCTTCTCAAAGGTAACATCGGTGGAGTTGAAGGATCTGCCTCAACTTACGAGTTTCTATCCCAAAACACATGGTTCCCAGTGGCCGTTACTTGAACAATTGGAAGTGAAGAGATGTGATAAAGTGAAAATCTTTGCCGCAGAATTTTCAATCTCTCAAAAGAAACATGAGATGAATCATCTAATGTCAACACCACCTTTATTTTCAATCAGCGAGGTTGTATTCCCAAATCTAGTAACCTTGGAGGTGCATGGATATAATAATTCAAGATTTTTGTTCTCATTTTCTGTGGCTAAAAGTTTTATACTATTGAGACACCTGAAAATATCCATATGTGAACTTCTGCAAGAGATTGTATCATCAACAAGAGAATGCGATGAAGAAAATATGGATGACATGTTTCCTAAACTTAACACTTTGAAACTCAAAGCACTTCCAAACCTTGCTAGATTTGGCACAGGAAATTATGTTGAATTTCCGGTCTTGGAAGAATTGGAGATAGATGATTGTGTTAAATTGGTGGAATTCATTGGCAATAAAGTTGCTACGAGTAGTGAAGATACTAGAAACAGCAAGGAAATTGAACAGAGGATTTTGGAAGAGGAAGGAAACCTTGATGTTAAGAGCGAGACTGTTGTACAATATATCCTCTTTGACAAAAAGGTAGGATTTCCTAGCTTGGAGAGATTGATCATTGACGGGGCAAGGGAGTTGAAGGCAATATGGCGTGTCCAACTTGCTCGAGACTCTTTTCGGAGACTCAAGCAAGTAGATGTCCAGGAATGCAAAAATCTAGTAAGTTTGTTTCCGCCTAGTGTCATTGGAAGATTGAATGCCCTGGAAACCTTGACGATATGGGGTTGCGGATCACTAGAAGTGATATTTGAATTACCGGAAAGAAGTAATGTTAAAGAAATACATGCCGACACATCATTCCCTCATGACCAGTTGAAACATTTTGATTGTCAAAATCTTGATTCAATAAACATATACGGGTGTCATAGTTTGAAACAGATTTTCCCAGCCTCAGTGGCCAGAGGTCTTCAAAACCTTACTTGGTTGGATGTGGCCAACTGTGAAGCAATTGAGGAAATTGTTGGTGAGGAAGAGGAAAAAGAAGGTCCAGAAACAACACCTCCTTCTTTTGTGTTCCCAAAAGTAATATCAGTGGAGTTGAAGGATCTGCCTCAACTTACGAGTTTCTATCCCAAAACACATGCTTCCCAGTGGCCATCACTCGTACAATTGGAGGTGGAGAGATGTGATAAAGTGGGGATTTTTGCCGCAGAATTTTCAATCTCTCAAAAGAATCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1544

Amino Acids

176.11

Weight (kDa)

5.67

Isoelectric Point (pI)

41.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 160 - 321 7.4e-27 NB-ARC domain
AAA_22 PF13401 177 - 267 1e-05 AAA domain
LRR_14 PF23598 548 - 815 1.5e-09 Leucine-rich repeat region
LRR_RPS2 PF23247 778 - 906 3.6e-14 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 959 - 1084 8.5e-24 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1038 - 1150 3.1e-14 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1175 - 1288 8.6e-11 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1341 - 1412 6e-13 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1420 - 1529 1e-12 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 950
AasI GACNNNNNNGTC 1 cut(s) 822
AatII GACGTC 2 cut(s) 52, 969
Acc36I ACCTGC 1 cut(s) 950
AccB7I CCANNNNNTGG 1 cut(s) 2308
AccI GTMKAC 2 cut(s) 52, 2737
AciI CCGC 9 cut(s) 893, 1086, 2502, 2981, 3036, 3456, 4127, 4182, 4602
AclI AACGTT 2 cut(s) 762, 1736
AclWI GGATC 4 cut(s) 3046, 3360, 4192, 4506
AcoI YGGCCR 8 cut(s) 225, 1490, 1780, 3204, 3401, 4350, 4386, 4547
AcuI CTGAAG 6 cut(s) 186, 573, 1581, 2039, 2267, 2687
AcvI CACGTG 1 cut(s) 1453
AcyI GRCGYC 3 cut(s) 49, 61, 966
AdeI CACNNNGTG 1 cut(s) 1916
AfaI GTAC 5 cut(s) 1256, 2478, 2811, 3957, 4560
AfiI CCNNNNNNNGG 2 cut(s) 2308, 2877
AflII CTTAAG 1 cut(s) 1102
AflIII ACRYGT 2 cut(s) 851, 3714
AhdI GACNNNNNGTC 3 cut(s) 200, 318, 2762
AjnI CCWGG 7 cut(s) 450, 743, 1152, 2949, 3009, 4095, 4155
AloI GAACNNNNNNTCC 4 cut(s) 747, 779, 1575, 1607
Alw21I GWGCWC 1 cut(s) 1520
Alw44I GTGCAC 1 cut(s) 1516
AlwI GGATC 4 cut(s) 3046, 3360, 4192, 4506
AlwNI CAGNNNCTG 2 cut(s) 1258, 1660
Ama87I CYCGRG 5 cut(s) 114, 861, 1317, 2913, 4059
AoxI GGCC 9 cut(s) 225, 453, 1490, 1780, 3204, 3401, 4350, 4386, 4547
ApaLI GTGCAC 1 cut(s) 1516
ApeKI GCWGC 1 cut(s) 3033
AseI ATTAAT 2 cut(s) 1040, 2379
Asp700I GAANNNNTTC 2 cut(s) 660, 2147
AspLEI GCGC 1 cut(s) 1159
AspS9I GGNCC 1 cut(s) 4439
AsuC2I CCSGG 5 cut(s) 653, 1318, 1319, 2872, 3066
AsuHPI GGTGA 9 cut(s) 167, 194, 974, 1405, 1902, 1945, 2000, 3284, 4430
AvaI CYCGRG 5 cut(s) 114, 861, 1317, 2913, 4059
AvaII GGWCC 1 cut(s) 4439
BaeGI GKGCMC 1 cut(s) 1520
BalI TGGCCA 6 cut(s) 1492, 1782, 3206, 4352, 4388, 4549
BbrPI CACGTG 1 cut(s) 1453
BbsI GAAGAC 4 cut(s) 1856, 3206, 3313, 4352
Bbv12I GWGCWC 1 cut(s) 1520
BbvI GCAGC 1 cut(s) 3020
BccI CCATC 6 cut(s) 949, 1363, 1379, 1639, 1742, 4558
BceAI ACGGC 2 cut(s) 717, 3388
BcgI CGANNNNNNTGC 8 cut(s) 218, 252, 1841, 1875, 1992, 2026, 2696, 2730
BciT130I CCWGG 7 cut(s) 452, 745, 1154, 2951, 3011, 4097, 4157
BciVI GTATCC 3 cut(s) 39, 741, 2509
BclI TGATCA 2 cut(s) 2862, 4008
BcnI CCSGG 5 cut(s) 653, 1318, 1319, 2872, 3066
BfmI CTRYAG 2 cut(s) 85, 107
BfoI RGCGCY 1 cut(s) 1160
BfrI CTTAAG 1 cut(s) 1102
BfuAI ACCTGC 1 cut(s) 950
BfuI GTATCC 3 cut(s) 39, 741, 2509
BglI GCCNNNNNGGC 3 cut(s) 294, 3203, 4349
BglII AGATCT 1 cut(s) 1524
BisI GCNGC 4 cut(s) 1086, 3034, 3456, 4602
BlsI GCNGC 4 cut(s) 1087, 3035, 3457, 4603
Bme18I GGWCC 1 cut(s) 4439
BmeRI GACNNNNNGTC 3 cut(s) 200, 318, 2762
BmeT110I CYCGRG 5 cut(s) 114, 861, 1317, 2913, 4059
BmgT120I GGNCC 1 cut(s) 4439
BmiI GGNNCC 1 cut(s) 3394
BmrI ACTGGG 3 cut(s) 65, 3391, 4537
BmsI GCATC 6 cut(s) 876, 1087, 1641, 1742, 2302, 3241
BmuI ACTGGG 3 cut(s) 65, 3391, 4537
BpiI GAAGAC 4 cut(s) 1856, 3206, 3313, 4352
BpmI CTGGAG 1 cut(s) 2173
BpuEI CTTGAG 3 cut(s) 2180, 2918, 4064
BpuMI CCSGG 5 cut(s) 653, 1318, 1319, 2872, 3066
BsaAI YACGTR 1 cut(s) 1453
BsaHI GRCGYC 3 cut(s) 49, 61, 966
BsaJI CCNNGG 7 cut(s) 292, 1317, 2655, 2871, 3009, 3558, 4155
BsaWI WCCGGW 4 cut(s) 440, 1428, 3796, 4210
BsaXI ACNNNNNCTCC 6 cut(s) 1575, 1605, 3292, 3322, 4438, 4468
Bsc4I CCNNNNNNNGG 2 cut(s) 2308, 2877
Bse1I ACTGG 9 cut(s) 60, 354, 1783, 1944, 2193, 3118, 3397, 4264, 4543
Bse3DI GCAATG 1 cut(s) 2865
BseBI CCWGG 7 cut(s) 452, 745, 1154, 2951, 3011, 4097, 4157
BseDI CCNNGG 7 cut(s) 292, 1317, 2655, 2871, 3009, 3558, 4155
BseLI CCNNNNNNNGG 2 cut(s) 2308, 2877
BseMI GCAATG 1 cut(s) 2865
BseMII CTCAG 4 cut(s) 1652, 2045, 3213, 4359
BseNI ACTGG 9 cut(s) 60, 354, 1783, 1944, 2193, 3118, 3397, 4264, 4543
BseRI GAGGAG 3 cut(s) 371, 558, 3300
BseSI GKGCMC 1 cut(s) 1520
BseXI GCAGC 1 cut(s) 3020
BseYI CCCAGC 2 cut(s) 3193, 4339
BsgI GTGCAG 1 cut(s) 2159
BshFI GGCC 9 cut(s) 227, 455, 1492, 1782, 3206, 3403, 4352, 4388, 4549
BsiHKAI GWGCWC 1 cut(s) 1520
BsiHKCI CYCGRG 5 cut(s) 114, 861, 1317, 2913, 4059
BsiSI CCGG 8 cut(s) 441, 653, 1318, 1429, 2871, 3065, 3797, 4211
BslFI GGGAC 4 cut(s) 72, 443, 828, 2141
BslI CCNNNNNNNGG 2 cut(s) 2308, 2877
BsmBI CGTCTC 2 cut(s) 1467, 2270
BsmFI GGGAC 4 cut(s) 72, 443, 828, 2141
BsmI GAATGC 7 cut(s) 1404, 2549, 2960, 3010, 3695, 4106, 4156
BsnI GGCC 9 cut(s) 227, 455, 1492, 1782, 3206, 3403, 4352, 4388, 4549
BsoBI CYCGRG 5 cut(s) 114, 861, 1317, 2913, 4059
Bsp1286I GDGCHC 1 cut(s) 1520
Bsp1407I TGTACA 3 cut(s) 2476, 2809, 3955
Bsp19I CCATGG 1 cut(s) 292
BspACI CCGC 9 cut(s) 893, 1086, 2502, 2981, 3036, 3456, 4127, 4182, 4602
BspANI GGCC 9 cut(s) 227, 455, 1492, 1782, 3206, 3403, 4352, 4388, 4549
BspCNI CTCAG 4 cut(s) 1653, 2044, 3212, 4358
BspHI TCATGA 2 cut(s) 3112, 4258
BspLI GGNNCC 1 cut(s) 3394
BspMAI CTGCAG 1 cut(s) 89
BspMI ACCTGC 1 cut(s) 950
BspPI GGATC 4 cut(s) 3046, 3360, 4192, 4506
BspQI GCTCTTC 1 cut(s) 718
BspTI CTTAAG 1 cut(s) 1102
BsrDI GCAATG 1 cut(s) 2865
BsrGI TGTACA 3 cut(s) 2476, 2809, 3955
BsrI ACTGG 9 cut(s) 60, 354, 1783, 1944, 2193, 3118, 3397, 4264, 4543
BssECI CCNNGG 7 cut(s) 292, 1317, 2655, 2871, 3009, 3558, 4155
BssNI GRCGYC 3 cut(s) 49, 61, 966
BssT1I CCWWGG 3 cut(s) 292, 2655, 3558
Bst2UI CCWGG 7 cut(s) 452, 745, 1154, 2951, 3011, 4097, 4157
Bst6I CTCTTC 9 cut(s) 718, 1716, 2243, 2766, 2772, 3273, 3422, 3912, 4419
BstACI GRCGYC 3 cut(s) 49, 61, 966
BstAFI CTTAAG 1 cut(s) 1102
BstAUI TGTACA 3 cut(s) 2476, 2809, 3955
BstBAI YACGTR 1 cut(s) 1453
BstC8I GCNNGC 4 cut(s) 585, 730, 891, 2005
BstDEI CTNAG 7 cut(s) 1521, 1661, 1805, 2031, 2404, 3199, 4345
BstDSI CCRYGG 1 cut(s) 292
BstH2I RGCGCY 1 cut(s) 1160
BstHHI GCGC 1 cut(s) 1159
BstMWI GCNNNNNNNGC 3 cut(s) 294, 3203, 4349
BstNI CCWGG 7 cut(s) 452, 745, 1154, 2951, 3011, 4097, 4157
BstNSI RCATGY 6 cut(s) 855, 2903, 3095, 3718, 4241, 4538
BstSFI CTRYAG 2 cut(s) 85, 107
BstSLI GKGCMC 1 cut(s) 1520
BstV1I GCAGC 1 cut(s) 3020
BstV2I GAAGAC 4 cut(s) 1856, 3206, 3313, 4352
BstX2I RGATCY 3 cut(s) 1524, 3352, 4498
BstYI RGATCY 3 cut(s) 1524, 3352, 4498
BsuI GTATCC 3 cut(s) 39, 741, 2509
BsuRI GGCC 9 cut(s) 227, 455, 1492, 1782, 3206, 3403, 4352, 4388, 4549
BtgI CCRYGG 1 cut(s) 292
BtgZI GCGATG 2 cut(s) 2721, 3708
BtsI GCAGTG 2 cut(s) 82, 234
BveI ACCTGC 1 cut(s) 950
Cac8I GCNNGC 4 cut(s) 585, 730, 891, 2005
CaiI CAGNNNCTG 2 cut(s) 1258, 1660
CciI TCATGA 2 cut(s) 3112, 4258
CfoI GCGC 1 cut(s) 1159
Cfr13I GGNCC 1 cut(s) 4439
Cfr9I CCCGGG 1 cut(s) 1317
CseI GACGC 2 cut(s) 69, 2182
Csp6I GTAC 5 cut(s) 1255, 2477, 2810, 3956, 4559
CspCI CAANNNNNGTGG 3 cut(s) 38, 2067, 2102
CviQI GTAC 5 cut(s) 1255, 2477, 2810, 3956, 4559
DdeI CTNAG 7 cut(s) 1521, 1661, 1805, 2031, 2404, 3199, 4345
DraI TTTAAA 2 cut(s) 1065, 1291
DraIII CACNNNGTG 1 cut(s) 1916
DrdI GACNNNNNNGTC 1 cut(s) 822
DriI GACNNNNNGTC 3 cut(s) 200, 318, 2762
DseDI GACNNNNNNGTC 1 cut(s) 822
EaeI YGGCCR 8 cut(s) 225, 1490, 1780, 3204, 3401, 4350, 4386, 4547
Eam1104I CTCTTC 9 cut(s) 718, 1716, 2243, 2766, 2772, 3273, 3422, 3912, 4419
Eam1105I GACNNNNNGTC 3 cut(s) 200, 318, 2762
EarI CTCTTC 9 cut(s) 718, 1716, 2243, 2766, 2772, 3273, 3422, 3912, 4419
EciI GGCGGA 3 cut(s) 908, 2970, 4116
Eco130I CCWWGG 3 cut(s) 292, 2655, 3558
Eco147I AGGCCT 1 cut(s) 455
Eco32I GATATC 2 cut(s) 2374, 2566
Eco47I GGWCC 1 cut(s) 4439
Eco57I CTGAAG 6 cut(s) 186, 573, 1581, 2039, 2267, 2687
Eco72I CACGTG 1 cut(s) 1453
Eco88I CYCGRG 5 cut(s) 114, 861, 1317, 2913, 4059
EcoRI GAATTC 2 cut(s) 2696, 3842
EcoRII CCWGG 7 cut(s) 450, 743, 1152, 2949, 3009, 4095, 4155
EcoRV GATATC 2 cut(s) 2374, 2566
EcoT14I CCWWGG 3 cut(s) 292, 2655, 3558
EcoT22I ATGCAT 1 cut(s) 1404
ErhI CCWWGG 3 cut(s) 292, 2655, 3558
Esp3I CGTCTC 2 cut(s) 1467, 2270
FalI AAGNNNNNCTT 4 cut(s) 2769, 2801, 3915, 3947
FaqI GGGAC 4 cut(s) 72, 443, 828, 2141
FauNDI CATATG 2 cut(s) 1683, 3650
FbaI TGATCA 2 cut(s) 2862, 4008
FblI GTMKAC 2 cut(s) 52, 2737
Fnu4HI GCNGC 4 cut(s) 1086, 3034, 3456, 4602
Fsp4HI GCNGC 4 cut(s) 1086, 3034, 3456, 4602
GlaI GCGC 1 cut(s) 1158
GluI GCNGC 4 cut(s) 1086, 3034, 3456, 4602
GsaI CCCAGC 2 cut(s) 3197, 4343
GsuI CTGGAG 1 cut(s) 2173
HaeII RGCGCY 1 cut(s) 1160
HaeIII GGCC 9 cut(s) 227, 455, 1492, 1782, 3206, 3403, 4352, 4388, 4549
HapII CCGG 8 cut(s) 441, 653, 1318, 1429, 2871, 3065, 3797, 4211
HgaI GACGC 2 cut(s) 69, 2182
HhaI GCGC 1 cut(s) 1159
Hin1I GRCGYC 3 cut(s) 49, 61, 966
Hin6I GCGC 1 cut(s) 1157
HinP1I GCGC 1 cut(s) 1157
HincII GTYRAC 2 cut(s) 849, 3507
HindII GTYRAC 2 cut(s) 849, 3507
HindIII AAGCTT 4 cut(s) 132, 1727, 1927, 2594
HpaII CCGG 8 cut(s) 441, 653, 1318, 1429, 2871, 3065, 3797, 4211
HphI GGTGA 9 cut(s) 167, 194, 974, 1405, 1902, 1945, 2000, 3284, 4430
HpyCH4IV ACGT 7 cut(s) 49, 432, 762, 966, 1452, 1736, 2130
HpyF10VI GCNNNNNNNGC 3 cut(s) 294, 3203, 4349
HpyF3I CTNAG 7 cut(s) 1521, 1661, 1805, 2031, 2404, 3199, 4345
HpySE526I ACGT 7 cut(s) 49, 432, 762, 966, 1452, 1736, 2130
Hsp92I GRCGYC 3 cut(s) 49, 61, 966
HspAI GCGC 1 cut(s) 1157
Ksp22I TGATCA 2 cut(s) 2862, 4008
LguI GCTCTTC 1 cut(s) 718
LmnI GCTCC 3 cut(s) 1192, 2014, 3030
Lsp1109I GCAGC 1 cut(s) 3020
LweI GCATC 6 cut(s) 876, 1087, 1641, 1742, 2302, 3241
MaeII ACGT 7 cut(s) 49, 432, 762, 966, 1452, 1736, 2130
MaeIII GTNAC 7 cut(s) 433, 962, 1169, 2407, 3331, 3405, 3553
MfeI CAATTG 6 cut(s) 1853, 2306, 3255, 3416, 4401, 4562
MflI RGATCY 3 cut(s) 1524, 3352, 4498
MhlI GDGCHC 1 cut(s) 1520
MlsI TGGCCA 6 cut(s) 1492, 1782, 3206, 4352, 4388, 4549
MluNI TGGCCA 6 cut(s) 1492, 1782, 3206, 4352, 4388, 4549
MlyI GAGTC 7 cut(s) 1305, 1852, 2340, 2912, 2925, 4058, 4071
Mox20I TGGCCA 6 cut(s) 1492, 1782, 3206, 4352, 4388, 4549
Mph1103I ATGCAT 1 cut(s) 1404
MroXI GAANNNNTTC 2 cut(s) 660, 2147
MscI TGGCCA 6 cut(s) 1492, 1782, 3206, 4352, 4388, 4549
MslI CAYNNNNRTG 1 cut(s) 2427
Msp20I TGGCCA 6 cut(s) 1492, 1782, 3206, 4352, 4388, 4549
MspCI CTTAAG 1 cut(s) 1102
MspI CCGG 8 cut(s) 441, 653, 1318, 1429, 2871, 3065, 3797, 4211
MunI CAATTG 6 cut(s) 1853, 2306, 3255, 3416, 4401, 4562
Mva1269I GAATGC 7 cut(s) 1404, 2549, 2960, 3010, 3695, 4106, 4156
MvaI CCWGG 7 cut(s) 452, 745, 1154, 2951, 3011, 4097, 4157
MwoI GCNNNNNNNGC 3 cut(s) 294, 3203, 4349
NciI CCSGG 5 cut(s) 653, 1318, 1319, 2872, 3066
NcoI CCATGG 1 cut(s) 292
NdeI CATATG 2 cut(s) 1683, 3650
NlaIV GGNNCC 1 cut(s) 3394
NmeAIII GCCGAG 1 cut(s) 253
NmuCI GTSAC 1 cut(s) 962
NsiI ATGCAT 1 cut(s) 1404
NspI RCATGY 6 cut(s) 855, 2903, 3095, 3718, 4241, 4538
PaeR7I CTCGAG 4 cut(s) 114, 861, 2913, 4059
PagI TCATGA 2 cut(s) 3112, 4258
PaqCI CACCTGC 1 cut(s) 950
PceI AGGCCT 1 cut(s) 455
PciI ACATGT 2 cut(s) 851, 3714
PciSI GCTCTTC 1 cut(s) 718
PctI GAATGC 7 cut(s) 1404, 2549, 2960, 3010, 3695, 4106, 4156
PdmI GAANNNNTTC 2 cut(s) 660, 2147
PflFI GACNNNGTC 1 cut(s) 899
PflMI CCANNNNNTGG 1 cut(s) 2308
PfoI TCCNGGA 2 cut(s) 2949, 4095
PkrI GCNGC 4 cut(s) 1087, 3035, 3457, 4603
PleI GAGTC 7 cut(s) 1304, 1852, 2340, 2912, 2925, 4058, 4071
PmaCI CACGTG 1 cut(s) 1453
PmlI CACGTG 1 cut(s) 1453
PpsI GAGTC 7 cut(s) 1304, 1852, 2340, 2912, 2925, 4058, 4071
Ppu21I YACGTR 1 cut(s) 1453
PscI ACATGT 2 cut(s) 851, 3714
PshBI ATTAAT 2 cut(s) 1040, 2379
Psp1406I AACGTT 2 cut(s) 762, 1736
Psp6I CCWGG 7 cut(s) 450, 743, 1152, 2949, 3009, 4095, 4155
PspCI CACGTG 1 cut(s) 1453
PspFI CCCAGC 2 cut(s) 3193, 4339
PspGI CCWGG 7 cut(s) 450, 743, 1152, 2949, 3009, 4095, 4155
PspN4I GGNNCC 1 cut(s) 3394
PspPI GGNCC 1 cut(s) 4439
PspXI VCTCGAGB 1 cut(s) 114
PstI CTGCAG 1 cut(s) 89
PstNI CAGNNNCTG 2 cut(s) 1258, 1660
PsuI RGATCY 3 cut(s) 1524, 3352, 4498
PsyI GACNNNGTC 1 cut(s) 899
RsaI GTAC 5 cut(s) 1256, 2478, 2811, 3957, 4560
RsaNI GTAC 5 cut(s) 1255, 2477, 2810, 3956, 4559
RseI CAYNNNNRTG 1 cut(s) 2427
SapI GCTCTTC 1 cut(s) 718
SatI GCNGC 4 cut(s) 1086, 3034, 3456, 4602
Sau96I GGNCC 1 cut(s) 4439
SchI GAGTC 7 cut(s) 1305, 1852, 2340, 2912, 2925, 4058, 4071
SduI GDGCHC 1 cut(s) 1520
SfaNI GCATC 6 cut(s) 876, 1087, 1641, 1742, 2302, 3241
SfcI CTRYAG 2 cut(s) 85, 107
Sfr274I CTCGAG 4 cut(s) 114, 861, 2913, 4059
SinI GGWCC 1 cut(s) 4439
SlaI CTCGAG 4 cut(s) 114, 861, 2913, 4059
SmaI CCCGGG 1 cut(s) 1319
SmiMI CAYNNNNRTG 1 cut(s) 2427
SmlI CTYRAG 8 cut(s) 114, 861, 1102, 2195, 2913, 2933, 4059, 4079
SmoI CTYRAG 8 cut(s) 114, 861, 1102, 2195, 2913, 2933, 4059, 4079
SseBI AGGCCT 1 cut(s) 455
SsiI CCGC 9 cut(s) 893, 1086, 2502, 2981, 3036, 3456, 4127, 4182, 4602
SspI AATATT 4 cut(s) 1613, 2116, 2321, 2816
StuI AGGCCT 1 cut(s) 455
StyI CCWWGG 3 cut(s) 292, 2655, 3558
TaiI ACGT 7 cut(s) 52, 435, 765, 969, 1455, 1739, 2133
TaqI TCGA 8 cut(s) 115, 204, 862, 991, 1136, 2214, 2914, 4060
TatI WGTACW 3 cut(s) 2476, 2809, 3955
TauI GCSGC 3 cut(s) 1088, 3458, 4604
TseFI GTSAC 1 cut(s) 962
TseI GCWGC 1 cut(s) 3033
Tsp45I GTSAC 1 cut(s) 962
TspDTI ATGAA 7 cut(s) 1592, 2241, 2689, 2724, 3506, 3711, 3835
TspGWI ACGGA 5 cut(s) 308, 430, 735, 2294, 2384
TspMI CCCGGG 1 cut(s) 1317
Tth111I GACNNNGTC 1 cut(s) 899
Van91I CCANNNNNTGG 1 cut(s) 2308
Vha464I CTTAAG 1 cut(s) 1102
VneI GTGCAC 1 cut(s) 1516
VpaK11BI GGWCC 1 cut(s) 4439
VspI ATTAAT 2 cut(s) 1040, 2379
XbaI TCTAGA 1 cut(s) 3295
XceI RCATGY 6 cut(s) 855, 2903, 3095, 3718, 4241, 4538
XcmI CCANNNNNNNNNTGG 1 cut(s) 401
XhoI CTCGAG 4 cut(s) 114, 861, 2913, 4059
XmaI CCCGGG 1 cut(s) 1317
XmiI GTMKAC 2 cut(s) 52, 2737
XmnI GAANNNNTTC 2 cut(s) 660, 2147
ZraI GACGTC 2 cut(s) 50, 967
Zsp2I ATGCAT 1 cut(s) 1404
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.