RLG00000028065

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
18215468 .. 18218285
2818 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000028065

Sequence Viewer

Length: 1719 bp
ATGGCTAAAAGTTTCGTAAAGCTCAAACATCTTGAGATACGCAACTGCAAAGGCATGGAAGAGGTAGTATCATCAACAACAGATTACAATGAAGAAAATATGAATAACTTGTTCTGTAAGCTTGAAACTCTGGAACTGGAAGAACTTCCATGCCTTGGTAGAATCTGCACAGGAACTCGTATTGAATTTCCGTCCTTGAAGAAGTTGGTTATAGAGCATTGTAGAAAATTGAAGGCATTCATCTGTGACCCTATGAGTGATAAAAGTAAAAGAATCTGCAAAGAAATTGAAGAGAGGGAGTCAGAGGAGAGCCCAAGTGTTGAACATGAGAGTGTTGCAGAACGCTGCCTTTTTAACGACAAGGTAAGATTTCCTAGCTTGGAGGAATTGAAAATCTGTCACTTAGACGAGTTGCAGACAATATGGCACAGTAACCAACTTGCTGATCAAGACTCTTTTTGCCGACTCAAACAAGTTGACGTTAGTTTTTGCAAGAGTCTGATAAGTATATTTCCGCCTAGTAGTATCATGGGGAGACTGAATGCTCTGGAAGGATTACAGATAAAATTTTGCGACTCGCTAAAAGTGTTATTTGAAGTCGGAGGAATTAATGTTGAAGAGACACATGTCAACAGATCAACCCCTTATGATCAGTGGAAACCTTTGTACTGTCAAAATCTTGAATTCTTGTGGATATGCGGTGCTGACAGTTTGAAAAATATATTCCCAGCCTCTTTGGCCAGAGGACTTCAGCAACTACGACATATGGGGGTGTGGTCTTTTGGTGAGGAAGAGGGAGTAGAATTACCAACGCCTCCTCAATTGGAAAACCTGCCCCAACTCAAGAGTTTTTGTCCGGGAAAGCATACTTCCACGTGGCCATTACTCAAAGAATTGATGGTAATATTACAAAGCCGAATTAATGAGGCAGAAATTTCAATTTTCCAGGATAAACATGAGTCGGGCCCAGTGAAGTCTATCTTTCCAATGGACAAGGATTCATTCCCCAACTTGGAAGAATTGTCCGTGGGCAACATGGATATTTGGCACGGTACATCCCCAGTACCAACAGAGTCGTTCAGCAACCTAAAATGTATTAAATTTTGTTATTGGGCACCTTTCTCCCAGCTAGCTACATCACTCTTCCTCCAGAAATTACACAATATTGAAAGAATTGAAGTGATTGGGGCTCCTCGCGAAGAAATATTTGTCAGTGAAGGAAACAGTAGTTGTGAGGAAATACATGCAGTTGGGACCCTACCAAGCATACGAATTTTAAAGTTTTGGACTTACGAAATGTTGCATCTAGGGAAGGAGAACTCCGGATCAGGAGGCCCAATTTTTCCAAACTTGGAAGTTCTAGAGGTGATGCATCATTCTCTCGGATTAAAGAATTTGGAATCATCAGCGATTTCCTTCCGGAATTTAACAACTTTGAAAGTAGTTGATTGTCCGGTCATAGTGACAACAGACGGTGATGATGCAGCAGAAGAGATTACTTTCAGCCGATTGCAAGTTTTAACCCTTCGGATACTGCCAAAAATGCAAGGCTTTTGCTCCGGAAGTTGCATTGTGAATCTCCCATCCTCAACTACTTTATCCATGAGCAACCGCCTTAAATTGAAGATTTTCCAAGAAAAGCCAAAGATAACAAGCAAGGAGTCTGACCCGGAGGAGGAGGAGGAAGACAGTGAGGATGAGGAAATGTTGATTATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

573

Amino Acids

64.94

Weight (kDa)

5.13

Isoelectric Point (pI)

57.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_RPS2 PF23247 1 - 79 1.1e-09 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 123 - 192 1.9e-12 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 127 - 211 2.4e-14 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 346 - 484 3.1e-06 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 840
AccB1I GGYRCC 1 cut(s) 1114
AccB7I CCANNNNNTGG 1 cut(s) 155
AccII CGCG 1 cut(s) 1197
AccIII TCCGGA 3 cut(s) 1322, 1419, 1559
AciI CCGC 3 cut(s) 515, 699, 1612
AclWI GGATC 1 cut(s) 1333
AcoI YGGCCR 2 cut(s) 738, 878
AcsI RAATTY 8 cut(s) 185, 566, 683, 933, 1100, 1272, 1393, 1423
AcuI CTGAAG 1 cut(s) 734
AcvI CACGTG 1 cut(s) 876
AfaI GTAC 3 cut(s) 668, 1054, 1065
AfiI CCNNNNNNNGG 3 cut(s) 155, 1012, 1675
AflIII ACRYGT 1 cut(s) 625
AjnI CCWGG 1 cut(s) 945
AluBI AGCT 5 cut(s) 22, 121, 378, 1129, 1133
AluI AGCT 5 cut(s) 22, 121, 378, 1129, 1133
Alw26I GTCTC 2 cut(s) 529, 614
AlwI GGATC 1 cut(s) 1333
Aor13HI TCCGGA 3 cut(s) 1322, 1419, 1559
AoxI GGCC 4 cut(s) 738, 878, 964, 1333
ApaI GGGCCC 1 cut(s) 968
ApeKI GCWGC 2 cut(s) 345, 1484
ApoI RAATTY 8 cut(s) 185, 566, 683, 933, 1100, 1272, 1393, 1423
AseI ATTAAT 2 cut(s) 609, 921
Asp700I GAANNNNTTC 3 cut(s) 144, 236, 1628
AspS9I GGNCC 4 cut(s) 964, 965, 1254, 1334
AsuC2I CCSGG 2 cut(s) 858, 1670
AsuHPI GGTGA 3 cut(s) 797, 1378, 1487
AsuNHI GCTAGC 1 cut(s) 1129
AvaII GGWCC 1 cut(s) 1254
BaeGI GKGCMC 2 cut(s) 968, 1117
BalI TGGCCA 2 cut(s) 740, 880
BanI GGYRCC 1 cut(s) 1114
BanII GRGCYC 3 cut(s) 314, 968, 1192
BbrPI CACGTG 1 cut(s) 876
BbsI GAAGAC 1 cut(s) 1692
BbvI GCAGC 2 cut(s) 332, 1496
BccI CCATC 2 cut(s) 892, 1591
BciT130I CCWGG 1 cut(s) 947
BciVI GTATCC 1 cut(s) 1524
BclI TGATCA 2 cut(s) 445, 649
BcnI CCSGG 2 cut(s) 858, 1670
BcoDI GTCTC 2 cut(s) 529, 614
BfaI CTAG 5 cut(s) 375, 519, 1130, 1307, 1361
BfuAI ACCTGC 1 cut(s) 840
BfuI GTATCC 1 cut(s) 1524
BglI GCCNNNNNGGC 1 cut(s) 737
BisI GCNGC 2 cut(s) 346, 1485
BlsI GCNGC 2 cut(s) 347, 1486
Bme1390I CCNGG 3 cut(s) 858, 947, 1670
Bme18I GGWCC 1 cut(s) 1254
BmgT120I GGNCC 4 cut(s) 964, 965, 1254, 1334
BmiI GGNNCC 5 cut(s) 966, 1116, 1191, 1255, 1256
BmrFI CCNGG 3 cut(s) 858, 947, 1670
BmrI ACTGGG 2 cut(s) 962, 1055
BmsI GCATC 4 cut(s) 1312, 1359, 1381, 1471
BmtI GCTAGC 1 cut(s) 1133
BmuI ACTGGG 2 cut(s) 962, 1055
BoxI GACNNNNGTC 1 cut(s) 626
BpiI GAAGAC 1 cut(s) 1692
BpmI CTGGAG 1 cut(s) 1133
BpuEI CTTGAG 2 cut(s) 53, 827
BpuMI CCSGG 2 cut(s) 858, 1670
BsaAI YACGTR 1 cut(s) 876
BsaJI CCNNGG 2 cut(s) 154, 1026
BsaWI WCCGGW 4 cut(s) 1322, 1419, 1453, 1559
BsaXI ACNNNNNCTCC 2 cut(s) 1131, 1161
Bsc4I CCNNNNNNNGG 3 cut(s) 155, 1012, 1675
Bse1I ACTGG 3 cut(s) 141, 968, 1061
BseAI TCCGGA 3 cut(s) 1322, 1419, 1559
BseBI CCWGG 1 cut(s) 947
BseDI CCNNGG 2 cut(s) 154, 1026
BseGI GGATG 3 cut(s) 1055, 1583, 1702
BseLI CCNNNNNNNGG 3 cut(s) 155, 1012, 1675
BseNI ACTGG 3 cut(s) 141, 968, 1061
BseRI GAGGAG 6 cut(s) 320, 807, 1182, 1688, 1691, 1694
BseSI GKGCMC 2 cut(s) 968, 1117
BseXI GCAGC 2 cut(s) 332, 1496
BseYI CCCAGC 2 cut(s) 727, 1125
BsgI GTGCAG 1 cut(s) 151
Bsh1236I CGCG 1 cut(s) 1197
BshFI GGCC 4 cut(s) 740, 880, 966, 1335
BshNI GGYRCC 1 cut(s) 1114
BsiSI CCGG 6 cut(s) 857, 1323, 1420, 1454, 1560, 1670
BslFI GGGAC 1 cut(s) 1267
BslI CCNNNNNNNGG 3 cut(s) 155, 1012, 1675
BsmAI GTCTC 2 cut(s) 529, 614
BsmFI GGGAC 1 cut(s) 1267
BsmI GAATGC 2 cut(s) 236, 547
BsnI GGCC 4 cut(s) 740, 880, 966, 1335
Bsp120I GGGCCC 1 cut(s) 964
Bsp1286I GDGCHC 4 cut(s) 314, 968, 1117, 1192
Bsp13I TCCGGA 3 cut(s) 1322, 1419, 1559
Bsp143I GATC 4 cut(s) 445, 635, 649, 1325
Bsp68I TCGCGA 1 cut(s) 1197
BspACI CCGC 3 cut(s) 515, 699, 1612
BspANI GGCC 4 cut(s) 740, 880, 966, 1335
BspEI TCCGGA 3 cut(s) 1322, 1419, 1559
BspFNI CGCG 1 cut(s) 1197
BspLI GGNNCC 5 cut(s) 966, 1116, 1191, 1255, 1256
BspMI ACCTGC 1 cut(s) 840
BspOI GCTAGC 1 cut(s) 1133
BspPI GGATC 1 cut(s) 1333
BspT107I GGYRCC 1 cut(s) 1114
BsrI ACTGG 3 cut(s) 141, 968, 1061
BssECI CCNNGG 2 cut(s) 154, 1026
BssMI GATC 4 cut(s) 445, 635, 649, 1325
BssT1I CCWWGG 1 cut(s) 154
Bst2UI CCWGG 1 cut(s) 947
Bst4CI ACNGT 7 cut(s) 431, 671, 710, 1052, 1226, 1475, 1691
Bst6I CTCTTC 6 cut(s) 54, 285, 612, 786, 1148, 1485
BstBAI YACGTR 1 cut(s) 876
BstC8I GCNNGC 1 cut(s) 1131
BstDEI CTNAG 1 cut(s) 403
BstDSI CCRYGG 1 cut(s) 1026
BstF5I GGATG 3 cut(s) 1055, 1583, 1702
BstFNI CGCG 1 cut(s) 1197
BstKTI GATC 4 cut(s) 448, 638, 652, 1328
BstMAI GTCTC 2 cut(s) 529, 614
BstMBI GATC 4 cut(s) 445, 635, 649, 1325
BstMWI GCNNNNNNNGC 2 cut(s) 737, 1543
BstNI CCWGG 1 cut(s) 947
BstNSI RCATGY 2 cut(s) 629, 1247
BstPAI GACNNNNGTC 1 cut(s) 626
BstSCI CCNGG 3 cut(s) 856, 945, 1668
BstSLI GKGCMC 2 cut(s) 968, 1117
BstUI CGCG 1 cut(s) 1197
BstV1I GCAGC 2 cut(s) 332, 1496
BstV2I GAAGAC 1 cut(s) 1692
BsuI GTATCC 1 cut(s) 1524
BsuRI GGCC 4 cut(s) 740, 880, 966, 1335
BtgI CCRYGG 1 cut(s) 1026
BtsCI GGATG 3 cut(s) 1055, 1583, 1702
BtsIMutI CAGTG 4 cut(s) 659, 975, 1219, 1696
BtuMI TCGCGA 1 cut(s) 1197
BveI ACCTGC 1 cut(s) 840
Cac8I GCNNGC 1 cut(s) 1131
Cfr13I GGNCC 4 cut(s) 964, 965, 1254, 1334
Csp6I GTAC 3 cut(s) 667, 1053, 1064
CviAII CATG 9 cut(s) 55, 150, 326, 529, 626, 956, 1036, 1244, 1603
CviQI GTAC 3 cut(s) 667, 1053, 1064
DdeI CTNAG 1 cut(s) 403
DpnI GATC 4 cut(s) 447, 637, 651, 1327
DpnII GATC 4 cut(s) 445, 635, 649, 1325
DraI TTTAAA 1 cut(s) 1278
EaeI YGGCCR 2 cut(s) 738, 878
Eam1104I CTCTTC 6 cut(s) 54, 285, 612, 786, 1148, 1485
EarI CTCTTC 6 cut(s) 54, 285, 612, 786, 1148, 1485
EciI GGCGGA 1 cut(s) 504
Eco130I CCWWGG 1 cut(s) 154
Eco24I GRGCYC 3 cut(s) 314, 968, 1192
Eco47I GGWCC 1 cut(s) 1254
Eco57I CTGAAG 1 cut(s) 734
Eco72I CACGTG 1 cut(s) 876
EcoO109I RGGNCCY 1 cut(s) 1254
EcoRI GAATTC 1 cut(s) 683
EcoRII CCWGG 1 cut(s) 945
EcoT14I CCWWGG 1 cut(s) 154
EcoT22I ATGCAT 1 cut(s) 1374
EcoT38I GRGCYC 3 cut(s) 314, 968, 1192
ErhI CCWWGG 1 cut(s) 154
FaeI CATG 9 cut(s) 58, 153, 329, 532, 629, 959, 1039, 1247, 1606
FalI AAGNNNNNCTT 2 cut(s) 965, 997
FaqI GGGAC 1 cut(s) 1267
FatI CATG 9 cut(s) 54, 149, 325, 528, 625, 955, 1035, 1243, 1602
FauNDI CATATG 1 cut(s) 765
FbaI TGATCA 2 cut(s) 445, 649
Fnu4HI GCNGC 2 cut(s) 346, 1485
FokI GGATG 3 cut(s) 1042, 1570, 1709
FriOI GRGCYC 3 cut(s) 314, 968, 1192
Fsp4HI GCNGC 2 cut(s) 346, 1485
FspBI CTAG 5 cut(s) 375, 519, 1130, 1307, 1361
GluI GCNGC 2 cut(s) 346, 1485
GsaI CCCAGC 2 cut(s) 731, 1129
GsuI CTGGAG 1 cut(s) 1133
HaeIII GGCC 4 cut(s) 740, 880, 966, 1335
HapII CCGG 6 cut(s) 857, 1323, 1420, 1454, 1560, 1670
Hin1II CATG 9 cut(s) 58, 153, 329, 532, 629, 959, 1039, 1247, 1606
HincII GTYRAC 2 cut(s) 478, 631
HindII GTYRAC 2 cut(s) 478, 631
HindIII AAGCTT 1 cut(s) 119
HpaII CCGG 6 cut(s) 857, 1323, 1420, 1454, 1560, 1670
HphI GGTGA 3 cut(s) 797, 1378, 1487
Hpy166II GTNNAC 2 cut(s) 478, 631
Hpy188I TCNGA 6 cut(s) 304, 501, 602, 1385, 1530, 1666
Hpy8I GTNNAC 2 cut(s) 478, 631
HpyAV CCTTC 6 cut(s) 226, 545, 1211, 1306, 1426, 1535
HpyCH4III ACNGT 7 cut(s) 431, 671, 710, 1052, 1226, 1475, 1691
HpyCH4IV ACGT 2 cut(s) 480, 875
HpyF10VI GCNNNNNNNGC 2 cut(s) 737, 1543
HpyF3I CTNAG 1 cut(s) 403
HpySE526I ACGT 2 cut(s) 480, 875
Hsp92II CATG 9 cut(s) 58, 153, 329, 532, 629, 959, 1039, 1247, 1606
KflI GGGWCCC 1 cut(s) 1254
Kpn2I TCCGGA 3 cut(s) 1322, 1419, 1559
Ksp22I TGATCA 2 cut(s) 445, 649
Kzo9I GATC 4 cut(s) 445, 635, 649, 1325
LmnI GCTCC 2 cut(s) 1195, 1562
Lsp1109I GCAGC 2 cut(s) 332, 1496
LweI GCATC 4 cut(s) 1312, 1359, 1381, 1471
MaeI CTAG 5 cut(s) 375, 519, 1130, 1307, 1361
MaeII ACGT 2 cut(s) 480, 875
MaeIII GTNAC 4 cut(s) 245, 398, 431, 1462
MalI GATC 4 cut(s) 447, 637, 651, 1327
MboI GATC 4 cut(s) 445, 635, 649, 1325
MfeI CAATTG 1 cut(s) 821
MhlI GDGCHC 4 cut(s) 314, 968, 1117, 1192
MlsI TGGCCA 2 cut(s) 740, 880
MluNI TGGCCA 2 cut(s) 740, 880
MlyI GAGTC 8 cut(s) 308, 446, 459, 505, 569, 968, 1082, 1670
MmeI TCCRAC 1 cut(s) 580
Mox20I TGGCCA 2 cut(s) 740, 880
Mph1103I ATGCAT 1 cut(s) 1374
MroI TCCGGA 3 cut(s) 1322, 1419, 1559
MroXI GAANNNNTTC 3 cut(s) 144, 236, 1628
MscI TGGCCA 2 cut(s) 740, 880
MslI CAYNNNNRTG 1 cut(s) 330
Msp20I TGGCCA 2 cut(s) 740, 880
MspI CCGG 6 cut(s) 857, 1323, 1420, 1454, 1560, 1670
MspR9I CCNGG 3 cut(s) 858, 947, 1670
MunI CAATTG 1 cut(s) 821
Mva1269I GAATGC 2 cut(s) 236, 547
MvaI CCWGG 1 cut(s) 947
MvnI CGCG 1 cut(s) 1197
MwoI GCNNNNNNNGC 2 cut(s) 737, 1543
NciI CCSGG 2 cut(s) 858, 1670
NdeI CATATG 1 cut(s) 765
NdeII GATC 4 cut(s) 445, 635, 649, 1325
NheI GCTAGC 1 cut(s) 1129
NlaIII CATG 9 cut(s) 58, 153, 329, 532, 629, 959, 1039, 1247, 1606
NlaIV GGNNCC 5 cut(s) 966, 1116, 1191, 1255, 1256
NmuCI GTSAC 3 cut(s) 245, 398, 1462
NruI TCGCGA 1 cut(s) 1197
NsiI ATGCAT 1 cut(s) 1374
NspI RCATGY 2 cut(s) 629, 1247
PciI ACATGT 1 cut(s) 625
PctI GAATGC 2 cut(s) 236, 547
PdmI GAANNNNTTC 3 cut(s) 144, 236, 1628
PfeI GAWTC 5 cut(s) 162, 273, 998, 1400, 1576
PflMI CCANNNNNTGG 1 cut(s) 155
PfoI TCCNGGA 2 cut(s) 856, 945
PkrI GCNGC 2 cut(s) 347, 1486
PleI GAGTC 8 cut(s) 307, 446, 459, 504, 569, 967, 1081, 1669
PmaCI CACGTG 1 cut(s) 876
PmlI CACGTG 1 cut(s) 876
PpsI GAGTC 8 cut(s) 307, 446, 459, 504, 569, 967, 1081, 1669
Ppu21I YACGTR 1 cut(s) 876
PpuMI RGGWCCY 1 cut(s) 1254
PscI ACATGT 1 cut(s) 625
PshAI GACNNNNGTC 1 cut(s) 626
PshBI ATTAAT 2 cut(s) 609, 921
Psp5II RGGWCCY 1 cut(s) 1254
Psp6I CCWGG 1 cut(s) 945
PspCI CACGTG 1 cut(s) 876
PspFI CCCAGC 2 cut(s) 727, 1125
PspGI CCWGG 1 cut(s) 945
PspN4I GGNNCC 5 cut(s) 966, 1116, 1191, 1255, 1256
PspOMI GGGCCC 1 cut(s) 964
PspPI GGNCC 4 cut(s) 964, 965, 1254, 1334
PspPPI RGGWCCY 1 cut(s) 1254
RruI TCGCGA 1 cut(s) 1197
RsaI GTAC 3 cut(s) 668, 1054, 1065
RsaNI GTAC 3 cut(s) 667, 1053, 1064
RseI CAYNNNNRTG 1 cut(s) 330
SatI GCNGC 2 cut(s) 346, 1485
Sau3AI GATC 4 cut(s) 445, 635, 649, 1325
Sau96I GGNCC 4 cut(s) 964, 965, 1254, 1334
SchI GAGTC 8 cut(s) 308, 446, 459, 505, 569, 968, 1082, 1670
ScrFI CCNGG 3 cut(s) 858, 947, 1670
SduI GDGCHC 4 cut(s) 314, 968, 1117, 1192
SfaNI GCATC 4 cut(s) 1312, 1359, 1381, 1471
SinI GGWCC 1 cut(s) 1254
SmiMI CAYNNNNRTG 1 cut(s) 330
SmlI CTYRAG 2 cut(s) 32, 842
SmoI CTYRAG 2 cut(s) 32, 842
SsiI CCGC 3 cut(s) 515, 699, 1612
SspI AATATT 3 cut(s) 906, 1165, 1206
SspMI CTAG 5 cut(s) 375, 519, 1130, 1307, 1361
StyD4I CCNGG 3 cut(s) 856, 945, 1668
StyI CCWWGG 1 cut(s) 154
TaaI ACNGT 7 cut(s) 431, 671, 710, 1052, 1226, 1475, 1691
TaiI ACGT 2 cut(s) 483, 878
TatI WGTACW 1 cut(s) 666
TfiI GAWTC 5 cut(s) 162, 273, 998, 1400, 1576
TscAI CASTG 4 cut(s) 659, 975, 1219, 1696
TseFI GTSAC 3 cut(s) 245, 398, 1462
TseI GCWGC 2 cut(s) 345, 1484
Tsp45I GTSAC 3 cut(s) 245, 398, 1462
TspDTI ATGAA 4 cut(s) 105, 116, 229, 990
TspGWI ACGGA 2 cut(s) 180, 1015
TspRI CASTG 4 cut(s) 659, 975, 1219, 1696
Van91I CCANNNNNTGG 1 cut(s) 155
VpaK11BI GGWCC 1 cut(s) 1254
VspI ATTAAT 2 cut(s) 609, 921
XapI RAATTY 8 cut(s) 185, 566, 683, 933, 1100, 1272, 1393, 1423
XbaI TCTAGA 1 cut(s) 1360
XceI RCATGY 2 cut(s) 629, 1247
XmnI GAANNNNTTC 3 cut(s) 144, 236, 1628
XspI CTAG 5 cut(s) 375, 519, 1130, 1307, 1361
Zsp2I ATGCAT 1 cut(s) 1374
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.