Rmu_sc0000361.1_g000053

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000361.1
Physical Location & Seq
Reverse (-)
238398 .. 245179
6782 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000361.1_g000053.1.cds

Sequence Viewer

Length: 4389 bp
atggactttcttcttgtaattggtagaactgttggaaagatttttgagtatacaattgaaccagttgcacgccaaatgggttatgcactctactatagcaagaacatcaagaaactacggaatgaagtgggtgacttggttgatgccagagaaagggtgcaacatgctgttgaaatagaagaaagaagaggtaaaagaattgaagcagatgtgcagaactggctgactaaagtgaatgagatcacggaacaaacaaatgagtttctaggagacgaacagcatgcagagatcaagtgtcttcacagcttttgtcctaatataaagcttcgtcatcagttaagtaggaaatcaacgaagtttattcacgatgttgttgaactccatgaaaaacaagatttttccacttttgcgtacgaagttagcccacaagaggtgtgcagtatacctactaaagatattgaggtctttgcttcaaggatttcagtcgtgaaggatataatggatgaacttagaaattctaacagaggcataattggggtttatggtattgggggtgttgggaagacaacactcgtcaaagaagtttacaggaaagctacagaggatgagaagttgtttgatgaggtgattctggtactcgatgtgaaacagaatccaagcatccatagaattcaagtagaaattgccgagaagttgggtctcaaccttcatgaaaatgagacaatggctggaagagcgcgtcgtctgtgtaataggataaaagataaaaagactcttgtccttctagacgatgtttgggaacacattgatttggaggcagtgggtcttccttgcatggcaactcttaaaatactattgacatctcgaagtaaaatagtattatcttcaaatatgggtacacaaaaggagtttcttctccaagttttagacaaagaagaaacttggactttatttcaaaagatggcaggtgatattgttaaaagaccaaatatacaaactgtagccacccaagtagctgaaaaatgtggaggtttgccgcttttgattgtcactgttgcaagagctcttaaaaatagcatgttacctgcatggaaagacgctctcagacgcctaaaagtgttggatggacaagaattgacagataaggcatactctgctattgagtggagttacactaaattggatcatgaggagctaaagtcattattcttgctctgtgcaagtgtgcttgggcatggtaaccgtttcaatatcatctatttgttgaaatatagtatgggtttgggtctcattaaaaacgtgaatacaatagaagaagcacaagattcattgcattcattgcttgaaaaacttaaagattcttgtctactgctagagaataatgatgacagtacatgtattagaatgcatgatctagtacaagatgttgctaaaaggattgcttccagagatcaatacttcctatcagcgcgtggaaatgagttcaaagaatggccagataaggatttctgtgaaaagtgcaccctaatctctctcaaatactgtaccatctcccagttccctgaagttttgccgtgccgagaactaacaatgtttcttttaagcaattctactgaagattcctctcgtgaaattccatgcaacttctttaaagagatgaagaaactccgagtgttggatataactaatttgagtatctcattgctaccttcatctcttcaatttctaaaaaatcttcgaacattgtgcttagatcaatgcacattgacagatttagctctagttggagaactagagaacttagaaattctcagctttctgaagtccaaattcaaagagttgcccaatgaaattgggaaattgacatgtctacgattgttgaatttgacaggctgctctcaacttgaagtgatttcacctaatgttttatcaagcttgaaaagattagaacacttgagaatgggagatagctttaaccgatgggaggctgaaggagtgatccataccgaaagaagtaatgcaaaccttgaagaactaaagcagttgcgacagttaaccacattacaactacatatcccagataccaacattcttccaatagatcttttcacaagtaagttagagagattccaaatatgtattggttcagcatggaaatgggctgatgttaatgaaaccctcaatgcactaaagctccagctcactagcagcaaagaattggacaaaggtctaagaatgttgctgaaaagaactgaagacttgtacttggaggggatggatggtgtttataacaatatttttgatcaattaggtaccgaaggttgtcagcaactcaaacacctccatgtccaaaagaatgccgagtttgcatacatcattaatgggaaggtgggttttcccaatttaacatggttggcggtgagtgaactcaacggtttaagattcttgttctcatcttcaatggctagaagtctaggacagctcaaacgtcttcagatatctggatgtcaaatcatggaggagatagtaaaaatacaagaatctgatgaagacattgtagtgaacatgttttgtaagctacaagatctagagctaaaagatcttccaaaccttactaaattctgctcaagaagttcttctcaagagacaatgtcatgctttctttttgaagaaaaggatggatttccaagcttgaagagtttatacataattgggctttcaaggctgacgacaatatggcataatcaacttgggcaggcctctttttgcaaacttgaagtccttacagttcatggatgtgggagtctaataaatatcttctctgccagtattatgggaagactgaatgctctcgagacattatcagtaaaggagtgcaagtcccttcaagtggtatttgaaggagaaggaataatagatcaaatatccgcctctactgatcaaacttttgattgtgaaaatcttgactctttagaaatagattcatgtgagagtctgaaaaatattttttcagtctcggtggctcgaaatcttcaaaacttgaaaagattgatagtggtgaggtgtggagtggaggaaattgttgcaaaggaagagggaatacaaacggcgcttgagtttgtattttcaaaggtaacatatgggagatttaaagatttgccccgactcatgagtttttatccagggatgcatgtttccatatggccgacactcgtaactttggtggtgcagaaatgtggtaatgtggaggtattagcagaggaagtttcagcttttcaagaaaaacgcgagtcaaaccgttcacatggtcaaattacacaatctctatttttaattgaaaaggattcatttcccagcttggaaatgttgatactggacggcatggagatttggaatggtcaagtaccggtgaagttgtttagcaaactaaagtatcttgaggtagctcgtctacagtccgaatcagctgttttccttgacaaactactactcgatcttgaaggaaacactagtattgggacccagctctcagatttaacacatttgaggctcattaggatatacaagctgatgcatctaggcgaaaataactcgcaaacagcccgctcaaatcttctaaacgtggaaattctactggtggatggctgtgggagcttaaggaatctaagatcatcactaatatctttcaagaatctaatcactttgcaagtaagtttgtgtaagggattggaatacttgataacttactcgatggctaaaagtttagtgcaactcacaaaattagaagttgagaagtgccaaagactggtagaaatagtgggaagcattcaagatgatgtggatgatgacttgtgcaatgagattacgttcaggcggttgacacatttgaaactttctcatctaccaagattgcgaggcttttgctccagaaattgcactgtcaaattcccatccttggaaaccttatccatgagaaaaccccacaaattgaagattttccgtggtgctgacattaatcaacacgggagccggctccgggccattgagaacattgctcatgatcagccacctcccggctggcaacggccactcacgattcaaggtgcaggaagcaccaagtttgcgtgccaacatgagaattatgtgaggaaacgccctgccgcttctcgtttgacagcagctgcccttgccagtagaactcttgaacctactgaagcaaatcccatagcatgggctggtccagatgatacagagttgcaacttggttctccgtacttggaggctcatgtgtttgaccctgttggtcgacctacaaagaagcgagccaaaacaagaactccatcaagggtctacaatagtagtttaaatatcagcagagagtcgagctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1462

Amino Acids

165.84

Weight (kDa)

6.71

Isoelectric Point (pI)

44.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2289
AarI CACCTGC 1 cut(s) 956
Acc36I ACCTGC 2 cut(s) 956, 1093
Acc65I GGTACC 1 cut(s) 2312
AccB1I GGYRCC 1 cut(s) 2312
AccB7I CCANNNNNTGG 2 cut(s) 3805, 4230
AccBSI CCGCTC 1 cut(s) 3606
AccI GTMKAC 7 cut(s) 50, 442, 1366, 1870, 3451, 4306, 4350
AccII CGCG 3 cut(s) 739, 1471, 3288
AciI CCGC 6 cut(s) 1037, 2417, 2928, 3604, 3874, 4161
AclWI GGATC 2 cut(s) 1191, 1993
AcoI YGGCCR 3 cut(s) 1493, 3203, 4085
AcsI RAATTY 9 cut(s) 514, 669, 1632, 1806, 1829, 1882, 2618, 3627, 3944
AcuI CTGAAG 7 cut(s) 1584, 1635, 1841, 2010, 2274, 2477, 4233
AcyI GRCGYC 1 cut(s) 1108
AflII CTTAAG 1 cut(s) 3655
AflIII ACRYGT 3 cut(s) 1394, 1865, 2565
AgeI ACCGGT 1 cut(s) 3406
AhlI ACTAGT 1 cut(s) 3509
AjnI CCWGG 1 cut(s) 3181
Alw21I GWGCWC 2 cut(s) 1066, 1523
Alw26I GTCTC 7 cut(s) 264, 704, 713, 1292, 2639, 2849, 3019
Alw44I GTGCAC 1 cut(s) 1519
AlwI GGATC 2 cut(s) 1191, 1993
AlwNI CAGNNNCTG 1 cut(s) 4181
Ama87I CYCGRG 1 cut(s) 2852
AoxI GGCC 5 cut(s) 1493, 2757, 3203, 4038, 4085
ApaLI GTGCAC 1 cut(s) 1519
ApeKI GCWGC 4 cut(s) 1893, 2208, 4178, 4181
ApoI RAATTY 9 cut(s) 514, 669, 1632, 1806, 1829, 1882, 2618, 3627, 3944
ArsI GACNNNNNNTTYG 2 cut(s) 2763, 2795
AseI ATTAAT 2 cut(s) 2379, 4014
AsiGI ACCGGT 1 cut(s) 3406
Asp700I GAANNNNTTC 2 cut(s) 2635, 3995
Asp718I GGTACC 1 cut(s) 2312
AspLEI GCGC 3 cut(s) 739, 1471, 3112
AspS9I GGNCC 3 cut(s) 3519, 4038, 4238
AsuC2I CCSGG 2 cut(s) 4037, 4074
AsuHPI GGTGA 7 cut(s) 143, 637, 980, 1908, 2431, 3070, 3421
AsuII TTCGAA 1 cut(s) 1738
AvaI CYCGRG 1 cut(s) 2852
AvaII GGWCC 2 cut(s) 3519, 4238
BaeGI GKGCMC 1 cut(s) 1523
BaeI ACNNNNGTAYC 2 cut(s) 3416, 3449
BalI TGGCCA 1 cut(s) 1495
BanI GGYRCC 1 cut(s) 2312
BanII GRGCYC 1 cut(s) 1066
BarI GAAGNNNNNNTAC 4 cut(s) 2687, 2719, 3084, 3116
BauI CACGAG 1 cut(s) 1626
BbsI GAAGAC 7 cut(s) 290, 569, 818, 2262, 2483, 2556, 2845
Bbv12I GWGCWC 2 cut(s) 1066, 1523
BbvI GCAGC 4 cut(s) 1880, 2220, 4168, 4190
BceAI ACGGC 4 cut(s) 1558, 3123, 3394, 4100
BcgI CGANNNNNNTGC 6 cut(s) 263, 297, 1728, 1762, 3903, 3937
BciT130I CCWGG 1 cut(s) 3183
BclI TGATCA 3 cut(s) 2302, 2938, 4060
BcnI CCSGG 2 cut(s) 4037, 4074
BcoDI GTCTC 7 cut(s) 264, 704, 713, 1292, 2639, 2849, 3019
BcuI ACTAGT 1 cut(s) 3509
BfmI CTRYAG 4 cut(s) 94, 597, 999, 3452
BfoI RGCGCY 1 cut(s) 3113
BfrI CTTAAG 1 cut(s) 3655
BfuAI ACCTGC 2 cut(s) 956, 1093
BglII AGATCT 3 cut(s) 2101, 2584, 2599
BisI GCNGC 6 cut(s) 1037, 1894, 2209, 4161, 4179, 4182
BlsI GCNGC 6 cut(s) 1038, 1895, 2210, 4162, 4180, 4183
Bme1390I CCNGG 3 cut(s) 3183, 4037, 4074
Bme18I GGWCC 2 cut(s) 3519, 4238
BmeT110I CYCGRG 1 cut(s) 2852
BmgT120I GGNCC 3 cut(s) 3519, 4038, 4238
BmiI GGNNCC 5 cut(s) 2314, 3520, 3521, 4028, 4034
BmrFI CCNGG 3 cut(s) 3183, 4037, 4074
BmrI ACTGGG 1 cut(s) 1549
BmsI GCATC 5 cut(s) 133, 669, 3177, 3561, 3583
BmuI ACTGGG 1 cut(s) 1549
BoxI GACNNNNGTC 2 cut(s) 776, 2226
BpiI GAAGAC 7 cut(s) 290, 569, 818, 2262, 2483, 2556, 2845
BpmI CTGGAG 2 cut(s) 2180, 3910
Bpu14I TTCGAA 1 cut(s) 1738
BpuEI CTTGAG 5 cut(s) 1975, 2611, 2625, 3134, 3458
BpuMI CCSGG 2 cut(s) 4037, 4074
BsaHI GRCGYC 1 cut(s) 1108
BsaI GGTCTC 2 cut(s) 704, 1292
BsaJI CCNNGG 3 cut(s) 3182, 3954, 4000
BsaWI WCCGGW 1 cut(s) 3406
BsaXI ACNNNNNCTCC 8 cut(s) 1184, 1214, 2178, 2208, 2864, 2894, 4321, 4351
Bse118I RCCGGY 2 cut(s) 3406, 4029
Bse1I ACTGG 8 cut(s) 62, 224, 1555, 2826, 3378, 3639, 3810, 4191
Bse3DI GCAATG 5 cut(s) 1328, 1337, 1700, 3862, 4050
BseBI CCWGG 1 cut(s) 3183
BseDI CCNNGG 3 cut(s) 3182, 3954, 4000
BseMI GCAATG 5 cut(s) 1328, 1337, 1700, 3862, 4050
BseMII CTCAG 3 cut(s) 1117, 1825, 3543
BseNI ACTGG 8 cut(s) 62, 224, 1555, 2826, 3378, 3639, 3810, 4191
BseRI GAGGAG 2 cut(s) 1205, 2534
BseSI GKGCMC 1 cut(s) 1523
BseXI GCAGC 4 cut(s) 1880, 2220, 4168, 4190
BseYI CCCAGC 2 cut(s) 3353, 3522
BsgI GTGCAG 4 cut(s) 233, 457, 3248, 4125
Bsh1236I CGCG 3 cut(s) 739, 1471, 3288
BshFI GGCC 5 cut(s) 1495, 2759, 3205, 4040, 4087
BshNI GGYRCC 1 cut(s) 2312
BshTI ACCGGT 1 cut(s) 3406
BsiHKAI GWGCWC 2 cut(s) 1066, 1523
BsiHKCI CYCGRG 1 cut(s) 2852
BsiSI CCGG 4 cut(s) 3407, 4030, 4036, 4074
BsiWI CGTACG 1 cut(s) 411
BslFI GGGAC 2 cut(s) 2866, 3532
BsmAI GTCTC 7 cut(s) 264, 704, 713, 1292, 2639, 2849, 3019
BsmBI CGTCTC 1 cut(s) 264
BsmFI GGGAC 2 cut(s) 2866, 3532
BsmI GAATGC 5 cut(s) 1333, 1410, 2362, 2851, 3825
BsnI GGCC 5 cut(s) 1495, 2759, 3205, 4040, 4087
Bso31I GGTCTC 2 cut(s) 704, 1292
BsoBI CYCGRG 1 cut(s) 2852
Bsp119I TTCGAA 1 cut(s) 1738
Bsp1286I GDGCHC 2 cut(s) 1066, 1523
BspACI CCGC 6 cut(s) 1037, 2417, 2928, 3604, 3874, 4161
BspANI GGCC 5 cut(s) 1495, 2759, 3205, 4040, 4087
BspCNI CTCAG 3 cut(s) 1116, 1824, 3542
BspFNI CGCG 3 cut(s) 739, 1471, 3288
BspHI TCATGA 4 cut(s) 709, 1186, 3168, 4057
BspLI GGNNCC 5 cut(s) 2314, 3520, 3521, 4028, 4034
BspMI ACCTGC 2 cut(s) 956, 1093
BspPI GGATC 2 cut(s) 1191, 1993
BspQI GCTCTTC 1 cut(s) 727
BspT104I TTCGAA 1 cut(s) 1738
BspT107I GGYRCC 1 cut(s) 2312
BspTI CTTAAG 1 cut(s) 3655
BspTNI GGTCTC 2 cut(s) 704, 1292
BsrBI CCGCTC 1 cut(s) 3606
BsrDI GCAATG 5 cut(s) 1328, 1337, 1700, 3862, 4050
BsrFI RCCGGY 2 cut(s) 3406, 4029
BsrI ACTGG 8 cut(s) 62, 224, 1555, 2826, 3378, 3639, 3810, 4191
BssAI RCCGGY 2 cut(s) 3406, 4029
BssECI CCNNGG 3 cut(s) 3182, 3954, 4000
BssNAI GTATAC 2 cut(s) 51, 443
BssNI GRCGYC 1 cut(s) 1108
BssSI CACGAG 1 cut(s) 1626
BssT1I CCWWGG 1 cut(s) 3954
Bst1107I GTATAC 2 cut(s) 51, 443
Bst2BI CACGAG 1 cut(s) 1626
Bst2UI CCWGG 1 cut(s) 3183
Bst6I CTCTTC 5 cut(s) 181, 727, 1722, 2690, 3087
BstACI GRCGYC 1 cut(s) 1108
BstAFI CTTAAG 1 cut(s) 3655
BstAPI GCANNNNNTGC 2 cut(s) 1154, 1339
BstBI TTCGAA 1 cut(s) 1738
BstC8I GCNNGC 8 cut(s) 70, 282, 2757, 3604, 4031, 4079, 4126, 4323
BstDEI CTNAG 8 cut(s) 509, 1103, 1750, 1801, 1811, 2231, 3529, 3665
BstDSI CCRYGG 1 cut(s) 4000
BstEII GGTNACC 1 cut(s) 1238
BstFNI CGCG 3 cut(s) 739, 1471, 3288
BstH2I RGCGCY 1 cut(s) 3113
BstHHI GCGC 3 cut(s) 739, 1471, 3112
BstMAI GTCTC 7 cut(s) 264, 704, 713, 1292, 2639, 2849, 3019
BstMWI GCNNNNNNNGC 8 cut(s) 220, 734, 1154, 1339, 2366, 2722, 3651, 4187
BstNI CCWGG 1 cut(s) 3183
BstNSI RCATGY 7 cut(s) 167, 284, 1081, 1398, 1869, 2569, 3194
BstPAI GACNNNNGTC 2 cut(s) 776, 2226
BstPI GGTNACC 1 cut(s) 1238
BstSCI CCNGG 3 cut(s) 3181, 4035, 4072
BstSFI CTRYAG 4 cut(s) 94, 597, 999, 3452
BstSLI GKGCMC 1 cut(s) 1523
BstUI CGCG 3 cut(s) 739, 1471, 3288
BstV1I GCAGC 4 cut(s) 1880, 2220, 4168, 4190
BstV2I GAAGAC 7 cut(s) 290, 569, 818, 2262, 2483, 2556, 2845
BstX2I RGATCY 3 cut(s) 2101, 2584, 2599
BstXI CCANNNNNNTGG 1 cut(s) 2833
BstYI RGATCY 3 cut(s) 2101, 2584, 2599
BstZ17I GTATAC 2 cut(s) 51, 443
BsuRI GGCC 5 cut(s) 1495, 2759, 3205, 4040, 4087
BtgI CCRYGG 1 cut(s) 4000
BtsI GCAGTG 1 cut(s) 825
BtsIMutI CAGTG 3 cut(s) 825, 1050, 3936
BveI ACCTGC 2 cut(s) 956, 1093
Cac8I GCNNGC 8 cut(s) 70, 282, 2757, 3604, 4031, 4079, 4126, 4323
CaiI CAGNNNCTG 1 cut(s) 4181
CciI TCATGA 4 cut(s) 709, 1186, 3168, 4057
CfoI GCGC 3 cut(s) 739, 1471, 3112
Cfr10I RCCGGY 2 cut(s) 3406, 4029
Cfr13I GGNCC 3 cut(s) 3519, 4038, 4238
CseI GACGC 3 cut(s) 728, 1106, 1116
CspAI ACCGGT 1 cut(s) 3406
DdeI CTNAG 8 cut(s) 509, 1103, 1750, 1801, 1811, 2231, 3529, 3665
DraI TTTAAA 3 cut(s) 1651, 3151, 4365
EaeI YGGCCR 3 cut(s) 1493, 3203, 4085
Eam1104I CTCTTC 5 cut(s) 181, 727, 1722, 2690, 3087
EarI CTCTTC 5 cut(s) 181, 727, 1722, 2690, 3087
EciI GGCGGA 1 cut(s) 2917
Ecl136II GAGCTC 1 cut(s) 1064
Eco130I CCWWGG 1 cut(s) 3954
Eco147I AGGCCT 1 cut(s) 2759
Eco24I GRGCYC 1 cut(s) 1066
Eco31I GGTCTC 2 cut(s) 704, 1292
Eco32I GATATC 1 cut(s) 2499
Eco47I GGWCC 2 cut(s) 3519, 4238
Eco53kI GAGCTC 1 cut(s) 1064
Eco57I CTGAAG 7 cut(s) 1584, 1635, 1841, 2010, 2274, 2477, 4233
Eco88I CYCGRG 1 cut(s) 2852
Eco91I GGTNACC 1 cut(s) 1238
EcoICRI GAGCTC 1 cut(s) 1064
EcoO109I RGGNCCY 1 cut(s) 3519
EcoO65I GGTNACC 1 cut(s) 1238
EcoRI GAATTC 1 cut(s) 669
EcoRII CCWGG 1 cut(s) 3181
EcoRV GATATC 1 cut(s) 2499
EcoT14I CCWWGG 1 cut(s) 3954
EcoT22I ATGCAT 3 cut(s) 1410, 3192, 3576
EcoT38I GRGCYC 1 cut(s) 1066
ErhI CCWWGG 1 cut(s) 3954
Esp3I CGTCTC 1 cut(s) 264
FalI AAGNNNNNCTT 4 cut(s) 1426, 1458, 2620, 2652
FaqI GGGAC 2 cut(s) 2866, 3532
FauI CCCGC 1 cut(s) 3611
FauNDI CATATG 2 cut(s) 3139, 3200
FbaI TGATCA 3 cut(s) 2302, 2938, 4060
FblI GTMKAC 7 cut(s) 50, 442, 1366, 1870, 3451, 4306, 4350
Fnu4HI GCNGC 6 cut(s) 1037, 1894, 2209, 4161, 4179, 4182
FriOI GRGCYC 1 cut(s) 1066
Fsp4HI GCNGC 6 cut(s) 1037, 1894, 2209, 4161, 4179, 4182
GlaI GCGC 3 cut(s) 738, 1470, 3111
GluI GCNGC 6 cut(s) 1037, 1894, 2209, 4161, 4179, 4182
GsaI CCCAGC 2 cut(s) 3357, 3526
GsuI CTGGAG 2 cut(s) 2180, 3910
HaeII RGCGCY 1 cut(s) 3113
HaeIII GGCC 5 cut(s) 1495, 2759, 3205, 4040, 4087
HapII CCGG 4 cut(s) 3407, 4030, 4036, 4074
HgaI GACGC 3 cut(s) 728, 1106, 1116
HhaI GCGC 3 cut(s) 739, 1471, 3112
Hin1I GRCGYC 1 cut(s) 1108
Hin6I GCGC 3 cut(s) 737, 1469, 3110
HinP1I GCGC 3 cut(s) 737, 1469, 3110
HincII GTYRAC 3 cut(s) 2055, 3879, 4307
HindII GTYRAC 3 cut(s) 2055, 3879, 4307
HindIII AAGCTT 3 cut(s) 323, 1933, 2689
HpaI GTTAAC 1 cut(s) 2055
HpaII CCGG 4 cut(s) 3407, 4030, 4036, 4074
HphI GGTGA 7 cut(s) 143, 637, 980, 1908, 2431, 3070, 3421
Hpy188I TCNGA 8 cut(s) 1106, 1670, 1821, 2496, 2545, 2997, 3460, 3532
Hpy99I CGWCG 1 cut(s) 744
HpyCH4IV ACGT 4 cut(s) 1299, 2488, 3621, 3866
HpyF10VI GCNNNNNNNGC 8 cut(s) 220, 734, 1154, 1339, 2366, 2722, 3651, 4187
HpyF3I CTNAG 8 cut(s) 509, 1103, 1750, 1801, 1811, 2231, 3529, 3665
HpySE526I ACGT 4 cut(s) 1299, 2488, 3621, 3866
Hsp92I GRCGYC 1 cut(s) 1108
HspAI GCGC 3 cut(s) 737, 1469, 3110
KflI GGGWCCC 1 cut(s) 3519
KpnI GGTACC 1 cut(s) 2316
KroI GCCGGC 1 cut(s) 4029
KroNI GCCGGC 1 cut(s) 4031
Ksp22I TGATCA 3 cut(s) 2302, 2938, 4060
KspAI GTTAAC 1 cut(s) 2055
LguI GCTCTTC 1 cut(s) 727
LmnI GCTCC 6 cut(s) 1192, 2199, 3651, 3929, 4026, 4038
Lsp1109I GCAGC 4 cut(s) 1880, 2220, 4168, 4190
LweI GCATC 5 cut(s) 133, 669, 3177, 3561, 3583
MaeII ACGT 4 cut(s) 1299, 2488, 3621, 3866
MaeIII GTNAC 7 cut(s) 131, 1048, 1080, 1169, 1238, 3133, 3214
MbiI CCGCTC 1 cut(s) 3606
MfeI CAATTG 1 cut(s) 54
MflI RGATCY 3 cut(s) 2101, 2584, 2599
MhlI GDGCHC 2 cut(s) 1066, 1523
MlsI TGGCCA 1 cut(s) 1495
MluNI TGGCCA 1 cut(s) 1495
MlyI GAGTC 7 cut(s) 766, 2812, 2960, 3001, 3159, 3299, 4388
MmeI TCCRAC 4 cut(s) 13, 1101, 1656, 1765
Mox20I TGGCCA 1 cut(s) 1495
Mph1103I ATGCAT 3 cut(s) 1410, 3192, 3576
MroNI GCCGGC 1 cut(s) 4029
MroXI GAANNNNTTC 2 cut(s) 2635, 3995
MscI TGGCCA 1 cut(s) 1495
MslI CAYNNNNRTG 5 cut(s) 714, 2155, 2343, 2558, 2796
Msp20I TGGCCA 1 cut(s) 1495
MspA1I CMGCKG 2 cut(s) 3467, 4181
MspCI CTTAAG 1 cut(s) 3655
MspI CCGG 4 cut(s) 3407, 4030, 4036, 4074
MspR9I CCNGG 3 cut(s) 3183, 4037, 4074
MunI CAATTG 1 cut(s) 54
Mva1269I GAATGC 5 cut(s) 1333, 1410, 2362, 2851, 3825
MvaI CCWGG 1 cut(s) 3183
MvnI CGCG 3 cut(s) 739, 1471, 3288
MwoI GCNNNNNNNGC 8 cut(s) 220, 734, 1154, 1339, 2366, 2722, 3651, 4187
NaeI GCCGGC 1 cut(s) 4031
NciI CCSGG 2 cut(s) 4037, 4074
NdeI CATATG 2 cut(s) 3139, 3200
NgoMIV GCCGGC 1 cut(s) 4029
NlaIV GGNNCC 5 cut(s) 2314, 3520, 3521, 4028, 4034
NmeAIII GCCGAG 3 cut(s) 712, 1604, 2386
NmuCI GTSAC 2 cut(s) 131, 1048
NsiI ATGCAT 3 cut(s) 1410, 3192, 3576
NspI RCATGY 7 cut(s) 167, 284, 1081, 1398, 1869, 2569, 3194
NspV TTCGAA 1 cut(s) 1738
PaeI GCATGC 1 cut(s) 284
PaeR7I CTCGAG 1 cut(s) 2852
PagI TCATGA 4 cut(s) 709, 1186, 3168, 4057
PaqCI CACCTGC 1 cut(s) 956
PceI AGGCCT 1 cut(s) 2759
PciI ACATGT 3 cut(s) 1394, 1865, 2565
PciSI GCTCTTC 1 cut(s) 727
PctI GAATGC 5 cut(s) 1333, 1410, 2362, 2851, 3825
PdiI GCCGGC 1 cut(s) 4031
PdmI GAANNNNTTC 2 cut(s) 2635, 3995
Pfl23II CGTACG 1 cut(s) 411
PflFI GACNNNGTC 1 cut(s) 2650
PflMI CCANNNNNTGG 2 cut(s) 3805, 4230
PinAI ACCGGT 1 cut(s) 3406
PkrI GCNGC 6 cut(s) 1038, 1895, 2210, 4162, 4180, 4183
PleI GAGTC 7 cut(s) 766, 2811, 2960, 3000, 3159, 3298, 4387
PpsI GAGTC 7 cut(s) 766, 2811, 2960, 3000, 3159, 3298, 4387
PpuMI RGGWCCY 1 cut(s) 3519
PscI ACATGT 3 cut(s) 1394, 1865, 2565
PshAI GACNNNNGTC 2 cut(s) 776, 2226
PshBI ATTAAT 2 cut(s) 2379, 4014
PsiI TTATAA 1 cut(s) 2289
Psp124BI GAGCTC 1 cut(s) 1066
Psp5II RGGWCCY 1 cut(s) 3519
Psp6I CCWGG 1 cut(s) 3181
PspEI GGTNACC 1 cut(s) 1238
PspFI CCCAGC 2 cut(s) 3353, 3522
PspGI CCWGG 1 cut(s) 3181
PspLI CGTACG 1 cut(s) 411
PspN4I GGNNCC 5 cut(s) 2314, 3520, 3521, 4028, 4034
PspPI GGNCC 3 cut(s) 3519, 4038, 4238
PspPPI RGGWCCY 1 cut(s) 3519
PstNI CAGNNNCTG 1 cut(s) 4181
PsuI RGATCY 3 cut(s) 2101, 2584, 2599
PsyI GACNNNGTC 1 cut(s) 2650
PvuII CAGCTG 2 cut(s) 3467, 4181
RseI CAYNNNNRTG 5 cut(s) 714, 2155, 2343, 2558, 2796
SacI GAGCTC 1 cut(s) 1066
SalI GTCGAC 1 cut(s) 4305
SapI GCTCTTC 1 cut(s) 727
SatI GCNGC 6 cut(s) 1037, 1894, 2209, 4161, 4179, 4182
Sau96I GGNCC 3 cut(s) 3519, 4038, 4238
SchI GAGTC 7 cut(s) 766, 2812, 2960, 3001, 3159, 3299, 4388
ScrFI CCNGG 3 cut(s) 3183, 4037, 4074
SduI GDGCHC 2 cut(s) 1066, 1523
SfaNI GCATC 5 cut(s) 133, 669, 3177, 3561, 3583
SfcI CTRYAG 4 cut(s) 94, 597, 999, 3452
Sfr274I CTCGAG 1 cut(s) 2852
SfuI TTCGAA 1 cut(s) 1738
SinI GGWCC 2 cut(s) 3519, 4238
SlaI CTCGAG 1 cut(s) 2852
SmiMI CAYNNNNRTG 5 cut(s) 714, 2155, 2343, 2558, 2796
SmlI CTYRAG 7 cut(s) 1954, 2626, 2640, 2852, 3113, 3437, 3655
SmoI CTYRAG 7 cut(s) 1954, 2626, 2640, 2852, 3113, 3437, 3655
SpeI ACTAGT 1 cut(s) 3509
SphI GCATGC 1 cut(s) 284
SseBI AGGCCT 1 cut(s) 2759
SsiI CCGC 6 cut(s) 1037, 2417, 2928, 3604, 3874, 4161
SspI AATATT 2 cut(s) 2296, 3004
SstI GAGCTC 1 cut(s) 1066
StuI AGGCCT 1 cut(s) 2759
StyD4I CCNGG 3 cut(s) 3181, 4035, 4072
StyI CCWWGG 1 cut(s) 3954
TaiI ACGT 4 cut(s) 1302, 2491, 3624, 3869
TaqI TCGA 9 cut(s) 639, 865, 1738, 2853, 3025, 3492, 3749, 4306, 4382
TatI WGTACW 3 cut(s) 1391, 1417, 2262
TauI GCSGC 2 cut(s) 1039, 4163
TscAI CASTG 3 cut(s) 825, 1057, 3943
TseFI GTSAC 2 cut(s) 131, 1048
TseI GCWGC 4 cut(s) 1893, 2208, 4178, 4181
Tsp45I GTSAC 2 cut(s) 131, 1048
TspGWI ACGGA 4 cut(s) 133, 260, 3989, 4260
TspRI CASTG 3 cut(s) 825, 1057, 3943
Tth111I GACNNNGTC 1 cut(s) 2650
Van91I CCANNNNNTGG 2 cut(s) 3805, 4230
Vha464I CTTAAG 1 cut(s) 3655
VneI GTGCAC 1 cut(s) 1519
VpaK11BI GGWCC 2 cut(s) 3519, 4238
VspI ATTAAT 2 cut(s) 2379, 4014
XapI RAATTY 9 cut(s) 514, 669, 1632, 1806, 1829, 1882, 2618, 3627, 3944
XbaI TCTAGA 2 cut(s) 784, 2587
XceI RCATGY 7 cut(s) 167, 284, 1081, 1398, 1869, 2569, 3194
XcmI CCANNNNNNNNNTGG 2 cut(s) 2138, 4074
XhoI CTCGAG 1 cut(s) 2852
XmiI GTMKAC 7 cut(s) 50, 442, 1366, 1870, 3451, 4306, 4350
XmnI GAANNNNTTC 2 cut(s) 2635, 3995
Zsp2I ATGCAT 3 cut(s) 1410, 3192, 3576
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.