Rmu_sc0005276.1_g000019

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005276.1
OG0000042
Physical Location & Seq
Reverse (-)
97245 .. 99661
2417 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005276.1_g000019.1.cds

Sequence Viewer

Length: 1944 bp
atgcatgaactcgtacgcaatgttgcaatatggattgcatccagagatcaacatgtcttgctaagaacaaatcaagatcagttgaaagaatggccaaatcaggatttctttgagaagtgcactatgatctatttccatttctgcaacatccccatgcttcctgaagtaccttggaaatgtcgagaaataaaaatgttttatttgggtagtaatgatggctcgctaaaaatcccaagcaacttttttgaagagatgaaagcactcaaggtgttggatttaactggactctgcatcccatcgatacctccatctcttcaattcttaacaaatcttcgaacactgtgtctagatcggtgtgtgttgggtgatattgctctagttggacagctacgaaaccttgaaattcttagcttttttagatctcagatcaaacaggtcccaaaagaaatagggaatttgactcaactgaagttgttggagttcaccagttgctctgaacttgtactgatttcacctgatgttatatcaagcttgaaaagacttgaagctttaagaatgggaatggacagctttaaccgatgggagaatgaaggtgtcatcagaagtcaaacaaggagtaatgctagcctttcagagctgaagagcttgtcccggctaaccgcattagacatacatattctggatgctaacattcttccaccaaacttgttccctctgttagaaaggttccacatacttattggtgaagcatggggatggaatgattttgataaacccttcaagacactaaaactcaagctcactacaagcgatcagttggacaaaggtcttaaaatgctgctgaggagttctgaacacttatacttggatataatggagggtgttaatgatatttttcatctattagatagtaatcgttgtcagcaattaaaacatctccatgtgcaaaacaatgctgaagttacatctattatcaagttgaatgccttccccaccttggagtcactatgtctttacaaccttgctagcttggaaagtgtatgttatggccaagtgattgctaaacatttccaaacgaatgccttccccaccttggagtcactatgtctttacaaccttgctagcttggaaagtgtatgttatggccaagtgattgctgaacatttccaaaagctacagtcattgacactgttgagtctgccaaagcttgtcagtttcctctccaaaggtgggacatctattgtaacgacaacaatgggagaggttgtaatgtccaacttaacaaccttgattgtgcatggatgtgatagtttaggattcttgttttcatcttctatggccaaaagtcttgtgcaacttaaatatcttgagatatccagttgtctaatcatgaaagaggtagtatcatcaaaagaatctggtgcacaatatatggaaaacatcttttataagttaaaccatctacagctacagcatctaccaaacctcacaagattttgctcaggaagttatattgaacttcagtccttggagacattgcatatagaatattgtaccaaactggagagcttcatctatgatcctaggatcagggaagaaagggactcggagaaggatctcgagacttctgtggaatactttctttttgacagtaaggtgggacttccaagcttggagagattgatcctctatgatatacctatgttggtgacaatatggcgcaaccaacttgctccagaatctttgatcagaccccgaaaagttagcatgtacagatgccacagtttaatacatatctttgggactagtattatgcgaaggctgactgctctagacactctggagatatggcattgcaagtcgctacaagtggtttttgaagttggaggaatcaacattagagaaacatttgacacatcaaccactccgtcgaaaatattttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

647

Amino Acids

74.11

Weight (kDa)

6.33

Isoelectric Point (pI)

47.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1449
AciI CCGC 1 cut(s) 660
AclWI GGATC 4 cut(s) 1574, 1595, 1623, 1678
AcoI YGGCCR 4 cut(s) 92, 1048, 1144, 1338
AcsI RAATTY 2 cut(s) 402, 454
AcuI CTGAAG 5 cut(s) 183, 488, 659, 978, 1505
AfaI GTAC 5 cut(s) 15, 168, 504, 1555, 1772
AfiI CCNNNNNNNGG 3 cut(s) 997, 1093, 1230
AflIII ACRYGT 1 cut(s) 52
AhlI ACTAGT 1 cut(s) 1805
Alw21I GWGCWC 2 cut(s) 122, 1426
Alw26I GTCTC 2 cut(s) 1526, 1616
Alw44I GTGCAC 2 cut(s) 118, 1422
AlwI GGATC 4 cut(s) 1574, 1595, 1623, 1678
Ama87I CYCGRG 1 cut(s) 1619
AoxI GGCC 4 cut(s) 92, 1048, 1144, 1338
ApaLI GTGCAC 2 cut(s) 118, 1422
ApeKI GCWGC 1 cut(s) 838
ApoI RAATTY 2 cut(s) 402, 454
ArsI GACNNNNNNTTYG 2 cut(s) 328, 360
Asp700I GAANNNNTTC 3 cut(s) 986, 1082, 1638
AspA2I CCTAGG 1 cut(s) 1583
AspLEI GCGC 1 cut(s) 1722
AspS9I GGNCC 1 cut(s) 436
AsuC2I CCSGG 1 cut(s) 652
AsuHPI GGTGA 5 cut(s) 377, 475, 504, 755, 1720
AsuII TTCGAA 1 cut(s) 334
AsuNHI GCTAGC 3 cut(s) 623, 1025, 1121
AvaI CYCGRG 1 cut(s) 1619
AvaII GGWCC 1 cut(s) 436
AvrII CCTAGG 1 cut(s) 1583
BaeGI GKGCMC 2 cut(s) 122, 1426
BalI TGGCCA 4 cut(s) 94, 1050, 1146, 1340
Bbv12I GWGCWC 2 cut(s) 122, 1426
BbvCI CCTCAGC 1 cut(s) 842
BbvI GCAGC 1 cut(s) 825
BccI CCATC 6 cut(s) 209, 304, 316, 573, 750, 1467
BclI TGATCA 1 cut(s) 1746
BcnI CCSGG 1 cut(s) 652
BcoDI GTCTC 2 cut(s) 1526, 1616
BcuI ACTAGT 1 cut(s) 1805
BfaI CTAG 8 cut(s) 347, 377, 624, 1026, 1122, 1584, 1806, 1832
BfmI CTRYAG 3 cut(s) 1175, 1463, 1469
BglII AGATCT 1 cut(s) 419
BisI GCNGC 1 cut(s) 839
BlnI CCTAGG 1 cut(s) 1583
BlsI GCNGC 1 cut(s) 840
Bme1390I CCNGG 1 cut(s) 652
Bme18I GGWCC 1 cut(s) 436
BmeT110I CYCGRG 1 cut(s) 1619
BmgT120I GGNCC 1 cut(s) 436
BmiI GGNNCC 2 cut(s) 438, 728
BmrFI CCNGG 1 cut(s) 652
BmsI GCATC 5 cut(s) 47, 300, 673, 1483, 1766
BmtI GCTAGC 3 cut(s) 627, 1029, 1125
BoxI GACNNNNGTC 1 cut(s) 825
BpmI CTGGAG 3 cut(s) 1583, 1719, 1862
Bpu10I CCTNAGC 2 cut(s) 842, 1501
Bpu14I TTCGAA 1 cut(s) 334
BpuEI CTTGAG 3 cut(s) 248, 779, 1388
BpuMI CCSGG 1 cut(s) 652
Bsa29I ATCGAT 1 cut(s) 299
BsaBI GATNNNNATC 1 cut(s) 912
BsaJI CCNNGG 5 cut(s) 170, 996, 1092, 1527, 1583
BsaXI ACNNNNNCTCC 2 cut(s) 1251, 1281
Bsc4I CCNNNNNNNGG 3 cut(s) 997, 1093, 1230
Bse1I ACTGG 4 cut(s) 286, 486, 1377, 1566
Bse3DI GCAATG 3 cut(s) 25, 1535, 1852
Bse8I GATNNNNATC 1 cut(s) 912
BseCI ATCGAT 1 cut(s) 299
BseDI CCNNGG 5 cut(s) 170, 996, 1092, 1527, 1583
BseGI GGATG 6 cut(s) 38, 147, 291, 688, 761, 1307
BseJI GATNNNNATC 1 cut(s) 912
BseLI CCNNNNNNNGG 3 cut(s) 997, 1093, 1230
BseMI GCAATG 3 cut(s) 25, 1535, 1852
BseMII CTCAG 3 cut(s) 437, 833, 1515
BseNI ACTGG 4 cut(s) 286, 486, 1377, 1566
BseRI GAGGAG 1 cut(s) 859
BseSI GKGCMC 2 cut(s) 122, 1426
BseXI GCAGC 1 cut(s) 825
BshFI GGCC 4 cut(s) 94, 1050, 1146, 1340
BshVI ATCGAT 1 cut(s) 299
BsiHKAI GWGCWC 2 cut(s) 122, 1426
BsiHKCI CYCGRG 1 cut(s) 1619
BsiSI CCGG 1 cut(s) 652
BsiWI CGTACG 1 cut(s) 13
BslFI GGGAC 6 cut(s) 422, 634, 1246, 1616, 1674, 1816
BslI CCNNNNNNNGG 3 cut(s) 997, 1093, 1230
BsmAI GTCTC 2 cut(s) 1526, 1616
BsmFI GGGAC 6 cut(s) 422, 634, 1246, 1616, 1674, 1816
BsmI GAATGC 2 cut(s) 988, 1084
BsnI GGCC 4 cut(s) 94, 1050, 1146, 1340
BsoBI CYCGRG 1 cut(s) 1619
Bsp119I TTCGAA 1 cut(s) 334
Bsp1286I GDGCHC 2 cut(s) 122, 1426
Bsp1407I TGTACA 1 cut(s) 1770
BspACI CCGC 1 cut(s) 660
BspANI GGCC 4 cut(s) 94, 1050, 1146, 1340
BspCNI CTCAG 3 cut(s) 436, 834, 1514
BspDI ATCGAT 1 cut(s) 299
BspHI TCATGA 1 cut(s) 1389
BspLI GGNNCC 2 cut(s) 438, 728
BspOI GCTAGC 3 cut(s) 627, 1029, 1125
BspPI GGATC 4 cut(s) 1574, 1595, 1623, 1678
BspQI GCTCTTC 1 cut(s) 635
BspT104I TTCGAA 1 cut(s) 334
BsrDI GCAATG 3 cut(s) 25, 1535, 1852
BsrGI TGTACA 1 cut(s) 1770
BsrI ACTGG 4 cut(s) 286, 486, 1377, 1566
BssECI CCNNGG 5 cut(s) 170, 996, 1092, 1527, 1583
BssT1I CCWWGG 5 cut(s) 170, 996, 1092, 1527, 1583
Bst4CI ACNGT 5 cut(s) 342, 1179, 1191, 1652, 1784
Bst6I CTCTTC 3 cut(s) 243, 318, 635
BstAUI TGTACA 1 cut(s) 1770
BstBI TTCGAA 1 cut(s) 334
BstC8I GCNNGC 4 cut(s) 221, 625, 1027, 1123
BstDEI CTNAG 5 cut(s) 62, 407, 423, 842, 1501
BstF5I GGATG 6 cut(s) 38, 147, 291, 688, 761, 1307
BstHHI GCGC 1 cut(s) 1722
BstMAI GTCTC 2 cut(s) 1526, 1616
BstNSI RCATGY 2 cut(s) 56, 1771
BstPAI GACNNNNGTC 1 cut(s) 825
BstSCI CCNGG 1 cut(s) 650
BstSFI CTRYAG 3 cut(s) 1175, 1463, 1469
BstSLI GKGCMC 2 cut(s) 122, 1426
BstV1I GCAGC 1 cut(s) 825
BstX2I RGATCY 2 cut(s) 419, 1615
BstYI RGATCY 2 cut(s) 419, 1615
Bsu15I ATCGAT 1 cut(s) 299
BsuRI GGCC 4 cut(s) 94, 1050, 1146, 1340
BsuTUI ATCGAT 1 cut(s) 299
BtsCI GGATG 6 cut(s) 38, 147, 291, 688, 761, 1307
BtsIMutI CAGTG 2 cut(s) 338, 1187
Cac8I GCNNGC 4 cut(s) 221, 625, 1027, 1123
CciI TCATGA 1 cut(s) 1389
CfoI GCGC 1 cut(s) 1722
Cfr13I GGNCC 1 cut(s) 436
ClaI ATCGAT 1 cut(s) 299
Csp6I GTAC 5 cut(s) 14, 167, 503, 1554, 1771
CspCI CAANNNNNGTGG 2 cut(s) 687, 722
CviAII CATG 8 cut(s) 5, 53, 154, 750, 941, 1298, 1390, 1768
CviQI GTAC 5 cut(s) 14, 167, 503, 1554, 1771
DdeI CTNAG 5 cut(s) 62, 407, 423, 842, 1501
EaeI YGGCCR 4 cut(s) 92, 1048, 1144, 1338
Eam1104I CTCTTC 3 cut(s) 243, 318, 635
EarI CTCTTC 3 cut(s) 243, 318, 635
Eco130I CCWWGG 5 cut(s) 170, 996, 1092, 1527, 1583
Eco32I GATATC 1 cut(s) 1374
Eco47I GGWCC 1 cut(s) 436
Eco57I CTGAAG 5 cut(s) 183, 488, 659, 978, 1505
Eco88I CYCGRG 1 cut(s) 1619
EcoO109I RGGNCCY 1 cut(s) 436
EcoRV GATATC 1 cut(s) 1374
EcoT14I CCWWGG 5 cut(s) 170, 996, 1092, 1527, 1583
EcoT22I ATGCAT 1 cut(s) 6
ErhI CCWWGG 5 cut(s) 170, 996, 1092, 1527, 1583
FaeI CATG 8 cut(s) 8, 56, 157, 753, 944, 1301, 1393, 1771
FaqI GGGAC 6 cut(s) 422, 634, 1246, 1616, 1674, 1816
FatI CATG 8 cut(s) 4, 52, 153, 749, 940, 1297, 1389, 1767
FbaI TGATCA 1 cut(s) 1746
Fnu4HI GCNGC 1 cut(s) 839
FokI GGATG 6 cut(s) 25, 134, 278, 695, 768, 1314
Fsp4HI GCNGC 1 cut(s) 839
FspBI CTAG 8 cut(s) 347, 377, 624, 1026, 1122, 1584, 1806, 1832
GlaI GCGC 1 cut(s) 1721
GluI GCNGC 1 cut(s) 839
GsuI CTGGAG 3 cut(s) 1583, 1719, 1862
HaeIII GGCC 4 cut(s) 94, 1050, 1146, 1340
HapII CCGG 1 cut(s) 652
HhaI GCGC 1 cut(s) 1722
Hin1II CATG 8 cut(s) 8, 56, 157, 753, 944, 1301, 1393, 1771
Hin6I GCGC 1 cut(s) 1720
HinP1I GCGC 1 cut(s) 1720
HindIII AAGCTT 4 cut(s) 529, 546, 1205, 1669
HpaII CCGG 1 cut(s) 652
HphI GGTGA 5 cut(s) 377, 475, 504, 755, 1720
Hpy166II GTNNAC 3 cut(s) 120, 483, 1424
Hpy188I TCNGA 7 cut(s) 426, 496, 602, 634, 853, 1609, 1751
Hpy8I GTNNAC 3 cut(s) 120, 483, 1424
Hpy99I CGWCG 1 cut(s) 1933
HpyAV CCTTC 6 cut(s) 584, 787, 997, 1093, 1606, 1812
HpyCH4III ACNGT 5 cut(s) 342, 1179, 1191, 1652, 1784
HpyF3I CTNAG 5 cut(s) 62, 407, 423, 842, 1501
Hsp92II CATG 8 cut(s) 8, 56, 157, 753, 944, 1301, 1393, 1771
HspAI GCGC 1 cut(s) 1720
Ksp22I TGATCA 1 cut(s) 1746
LguI GCTCTTC 1 cut(s) 635
LmnI GCTCC 1 cut(s) 1738
Lsp1109I GCAGC 1 cut(s) 825
LweI GCATC 5 cut(s) 47, 300, 673, 1483, 1766
MaeI CTAG 8 cut(s) 347, 377, 624, 1026, 1122, 1584, 1806, 1832
MaeIII GTNAC 5 cut(s) 961, 1002, 1098, 1243, 1708
MboII GAAGA 7 cut(s) 260, 305, 323, 652, 686, 1323, 1607
MflI RGATCY 2 cut(s) 419, 1615
MhlI GDGCHC 2 cut(s) 122, 1426
MlsI TGGCCA 4 cut(s) 94, 1050, 1146, 1340
MluCI AATT 4 cut(s) 317, 402, 454, 926
MluNI TGGCCA 4 cut(s) 94, 1050, 1146, 1340
MlyI GAGTC 6 cut(s) 279, 454, 1010, 1106, 1204, 1598
MmeI TCCRAC 6 cut(s) 252, 361, 456, 798, 1299, 1864
Mox20I TGGCCA 4 cut(s) 94, 1050, 1146, 1340
Mph1103I ATGCAT 1 cut(s) 6
MroXI GAANNNNTTC 3 cut(s) 986, 1082, 1638
MscI TGGCCA 4 cut(s) 94, 1050, 1146, 1340
MslI CAYNNNNRTG 4 cut(s) 152, 754, 939, 1302
Msp20I TGGCCA 4 cut(s) 94, 1050, 1146, 1340
MspI CCGG 1 cut(s) 652
MspR9I CCNGG 1 cut(s) 652
Mva1269I GAATGC 2 cut(s) 988, 1084
NciI CCSGG 1 cut(s) 652
NheI GCTAGC 3 cut(s) 623, 1025, 1121
NlaIII CATG 8 cut(s) 8, 56, 157, 753, 944, 1301, 1393, 1771
NlaIV GGNNCC 2 cut(s) 438, 728
NmuCI GTSAC 3 cut(s) 1002, 1098, 1708
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 2 cut(s) 56, 1771
NspV TTCGAA 1 cut(s) 334
PaeR7I CTCGAG 1 cut(s) 1619
PagI TCATGA 1 cut(s) 1389
PciI ACATGT 1 cut(s) 52
PciSI GCTCTTC 1 cut(s) 635
PctI GAATGC 2 cut(s) 988, 1084
PdmI GAANNNNTTC 3 cut(s) 986, 1082, 1638
PfeI GAWTC 4 cut(s) 1317, 1415, 1739, 1890
Pfl23II CGTACG 1 cut(s) 13
PkrI GCNGC 1 cut(s) 840
PleI GAGTC 6 cut(s) 279, 454, 1009, 1105, 1203, 1598
PpsI GAGTC 6 cut(s) 279, 454, 1009, 1105, 1203, 1598
PpuMI RGGWCCY 1 cut(s) 436
PscI ACATGT 1 cut(s) 52
PshAI GACNNNNGTC 1 cut(s) 825
PsiI TTATAA 1 cut(s) 1449
Psp5II RGGWCCY 1 cut(s) 436
PspLI CGTACG 1 cut(s) 13
PspN4I GGNNCC 2 cut(s) 438, 728
PspPI GGNCC 1 cut(s) 436
PspPPI RGGWCCY 1 cut(s) 436
PsuI RGATCY 2 cut(s) 419, 1615
RsaI GTAC 5 cut(s) 15, 168, 504, 1555, 1772
RsaNI GTAC 5 cut(s) 14, 167, 503, 1554, 1771
RseI CAYNNNNRTG 4 cut(s) 152, 754, 939, 1302
SapI GCTCTTC 1 cut(s) 635
SatI GCNGC 1 cut(s) 839
Sau96I GGNCC 1 cut(s) 436
SchI GAGTC 6 cut(s) 279, 454, 1010, 1106, 1204, 1598
ScrFI CCNGG 1 cut(s) 652
SduI GDGCHC 2 cut(s) 122, 1426
SfaNI GCATC 5 cut(s) 47, 300, 673, 1483, 1766
SfcI CTRYAG 3 cut(s) 1175, 1463, 1469
Sfr274I CTCGAG 1 cut(s) 1619
SfuI TTCGAA 1 cut(s) 334
SinI GGWCC 1 cut(s) 436
SlaI CTCGAG 1 cut(s) 1619
SmiMI CAYNNNNRTG 4 cut(s) 152, 754, 939, 1302
SmlI CTYRAG 4 cut(s) 263, 794, 1367, 1619
SmoI CTYRAG 4 cut(s) 263, 794, 1367, 1619
SpeI ACTAGT 1 cut(s) 1805
Sse9I AATT 4 cut(s) 317, 402, 454, 926
SsiI CCGC 1 cut(s) 660
SspI AATATT 2 cut(s) 1550, 1938
SspMI CTAG 8 cut(s) 347, 377, 624, 1026, 1122, 1584, 1806, 1832
StyD4I CCNGG 1 cut(s) 650
StyI CCWWGG 5 cut(s) 170, 996, 1092, 1527, 1583
TaaI ACNGT 5 cut(s) 342, 1179, 1191, 1652, 1784
TaqI TCGA 5 cut(s) 181, 299, 334, 1620, 1931
TasI AATT 4 cut(s) 317, 402, 454, 926
TatI WGTACW 2 cut(s) 502, 1770
TfiI GAWTC 4 cut(s) 1317, 1415, 1739, 1890
TscAI CASTG 2 cut(s) 345, 1194
TseFI GTSAC 3 cut(s) 1002, 1098, 1708
TseI GCWGC 1 cut(s) 838
Tsp45I GTSAC 3 cut(s) 1002, 1098, 1708
TspDTI ATGAA 7 cut(s) 21, 269, 603, 887, 1317, 1406, 1561
TspGWI ACGGA 1 cut(s) 1917
TspRI CASTG 2 cut(s) 345, 1194
VneI GTGCAC 2 cut(s) 118, 1422
VpaK11BI GGWCC 1 cut(s) 436
XapI RAATTY 2 cut(s) 402, 454
XbaI TCTAGA 2 cut(s) 346, 1831
XceI RCATGY 2 cut(s) 56, 1771
XcmI CCANNNNNNNNNTGG 1 cut(s) 737
XhoI CTCGAG 1 cut(s) 1619
XmaJI CCTAGG 1 cut(s) 1583
XmnI GAANNNNTTC 3 cut(s) 986, 1082, 1638
XspI CTAG 8 cut(s) 347, 377, 624, 1026, 1122, 1584, 1806, 1832
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.