Rw0G020820

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00956
Physical Location & Seq
Reverse (-)
9265 .. 13294
4030 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G020820.1

Sequence Viewer

Length: 2712 bp
ATGGGGTTTCTTGTTGCAATTATTGGAGTTGTTGGAAAGATTGCTGACTTCACGGTTGCACCAGTTATACACCAAGTGGGTTATGTAATCAACTACAACAAGAACCTCAAGAAACTAAAGAGTCAAGTAGATGACTTGGGTGATGCCAGAGAAAGCATGAAGCGGAATGTTGAAACAGAGGAAAGAAAAGGTAGAGAAATTAAAGCAGGTGTCCAGAATTGGATGACTAAAGTGGATGAGATGACTAAAGAAGCAAACGATTTCTTGCAAGATGAACAGCATGCAGAGACTAGATGTCTCCATGGCTTTTGTCCTAATCTAAAGCTTCGCCATCATCGCAGCAGGGGATCAACAAAATTGGTTCAAGAAGTTGCTGAGCTCTGTGGGAAAAAGGATTTTGGCGATATTGCATACGATGTCAAACCAGAGGAGGTGTGCAGTATACCTGCTAAAGATTACCAGGCCTTTGATTCAAGGACTTCATTTGCAGAGAAAATCATGAATGAACTGAGACAATCTGAGACCGACATGATTGGGGTGTACGGTATTGGGGGCGTGGGGAAGACAACACTTGCTAAAGAAGTTTATCGGCAAGCTATAGAAGATAAAACGTTATTCGATGACGTTGTTATGGTACTAGATGTGAAAAAGATTCCAGATGTGGAAGAAATTCAAAAAAGAATTGCTGAAAAGTTGGGAATGGAATTTCTGGGAGCTGAGACTATAGACGGAAGAGCTGGTCGTCTTTTTCGTAGGATAAAAGACAAGAAAGTTCTGGTAATTTTGGATGACATACAAGAAAAAGTTGATTTGGAGATTTTGGGACTTCCACGGGTGTCCAATTGTAAAGTATTGTTGACTTCTAGAACCAGAGAAGTATTATCGGTTGAGATGCATACACAAAAGGAGTTTCTACTTGACCTTTTAAATGCAGAAGAAAACTGGAGTTTATTTGAGAAGATGGCAGGTGAAGTAGCCAAAAAGTGCGGAGGCTTGCCGGTTTTAGTGGTAACAGTTGCAAGCGCCCTGAAGAATAGAAGTACATTACATGCTTGGAAAGATGCCTTGCGACGCCTAAAAATATTTGACAAACAAGGATTTACGGAAAAAGTATACTTGGCTCTGGAGTGGAGTTATGAGCAATTGGATGATGAGGAGCTTAAGCCATTGTTCTTGCTTTCTGGAATTCTCATGGGTTACTCTATATTTCTTGATGACTTGTTGAAATATAGTCTGGGCTTGGGTTTGATTAAAAACGTGGATACAATGGAAGAAGCACAGGATGCATTGCTTTCACTGGTTGAAAAACTTAAAGATTCATGTCTGTTGCTAGAGGATAGTTATAGTAATAAATATGTTAGAATGCATGATCTTGTTCATGAAGTTGTAAACCGGATTGCCTGGAGAGATCAATACGTCTTTAAAGTAGCTATTGGAGACGAGTTCAAAGAATGGCCAACTAAGGATTTTTGTACAAAGTGCACTATGATCGTTCTTGATAACTGCAGTATCCCCCATCTTCCGGAAGCTTTGGAATGCCCAGAACTGAAAATGCTTAACTTTATTAGTAGGGATGTTGATCACTTCTTGGAAATTCCCAGCAACTTTTTCGAAGGGATGAAGAAAGTCAGAGTGTTGGACTTGACTAGATTGAGTATCCTATCACTTCCTCCATCTCTCCAATTTCTAAAAAGTCTTCAGACATTGTGTTTGGATCAATGCACATTGGGAGACCTAACTTTGATTGGAGAGCTAAGAAACTTGGAAATTCTTAGCTTTGTAAGATCCAAGTTTAGAAAGTTGCCCAAAGAAATGGGGCAATTGACACGTCTGCGATTGTTGGATTTGAATGGTTGTTCTCAACTCGAAGTGATTTCACCTAATGTTATATCAAACTTGAAAAGGTTAGAAAACTTGAGAATGGGTAATAGCTTTAATCGATGGGAGGGTGAAGGAGTCATCAGTAGTGAAAGAAGAAATGCAAACCTTGAAGAGCTAAAGCACTTGCCTCAGCTAACTGCTTTACAAATACATATCCCAGATGCTAACATCCTTCCAGCAGATTTGTTCACCACTAGTAAGTTAAAGAGATTCCAAATATGTATTGGTTCTGCGTGGAAATGGGATAATGTGGATGAAGCCCTCAATGCACTAAAGCTCCGACTCACTGCTAGCAATGAATTGGACCAAGGTCTAAGAATGTTGCTGAAAAGAACTGAAGACTTGTACTTGGAGGGGACGGAGGGTGTTAATAATAGTATTGTCTATCAAATAGGTGCTGAAGGTTTTCAGAAATTGAAGCATCTCCATCTCCAAACGAATGCCGATTCAAAAAATCTAGAGACAATAGAAATTGTTTCATGTGACAGTTTGAAAAGTATTTTTCCAGCCTCAGTGGCCAGAAGTCTTCAACAATTGAGGAGTCTGAACGTCCAGAATTGTGGGGTAGAGGAAATCGTCTCAAAAGAAGACGGTGTACAGACAACACCTATGTTTGTTTTTTCAAAACTAACATATGTGAGATTCCAAGATTTACCCCAACTTAGGAGTTTCTATCCAGGATTGCATTCTTCGAAGTGGCCGTCACTCGTAGTTTTGGTAGTGCATGGCTGTACTAAGGTGCAGATATTTGCGGAGGGCAGGAGTGAGTTGAATAATCTTTGCACTCCAAATCAACAATCTTTGTTTTTGTTGAAGGAAAATCAAGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

903

Amino Acids

102.7

Weight (kDa)

6.05

Isoelectric Point (pI)

40.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 163 - 324 1.2e-29 NB-ARC domain
LRR_14 PF23598 501 - 774 9.2e-14 Leucine-rich repeat region
LRR_RPS2 PF23247 765 - 815 6.3e-11 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 197, 956
Acc36I ACCTGC 3 cut(s) 197, 454, 956
AccI GTMKAC 2 cut(s) 442, 1113
AccIII TCCGGA 1 cut(s) 1522
AciI CCGC 3 cut(s) 163, 987, 2633
AclI AACGTT 1 cut(s) 611
AclWI GGATC 3 cut(s) 355, 1722, 1779
AcoI YGGCCR 3 cut(s) 1454, 2397, 2579
AcsI RAATTY 5 cut(s) 669, 704, 1185, 1593, 1767
AcuI CTGAAG 4 cut(s) 1049, 1682, 2238, 2301
AcyI GRCGYC 1 cut(s) 1072
AdeI CACNNNGTG 1 cut(s) 76
AfaI GTAC 7 cut(s) 542, 636, 1042, 1474, 2228, 2478, 2614
AfiI CCNNNNNNNGG 2 cut(s) 1522, 2544
AflII CTTAAG 1 cut(s) 1160
AflIII ACRYGT 1 cut(s) 1826
AhdI GACNNNNNGTC 1 cut(s) 294
AhlI ACTAGT 1 cut(s) 2075
AjiI CACGTC 1 cut(s) 1829
AjnI CCWGG 3 cut(s) 459, 1400, 2557
Alw21I GWGCWC 2 cut(s) 381, 1484
Alw26I GTCTC 9 cut(s) 281, 302, 505, 515, 713, 1431, 1725, 2336, 2464
Alw44I GTGCAC 1 cut(s) 1480
AlwI GGATC 3 cut(s) 355, 1722, 1779
Aor13HI TCCGGA 1 cut(s) 1522
AoxI GGCC 4 cut(s) 462, 1454, 2397, 2579
ApaLI GTGCAC 1 cut(s) 1480
ApeKI GCWGC 1 cut(s) 339
ApoI RAATTY 5 cut(s) 669, 704, 1185, 1593, 1767
ArsI GACNNNNNNTTYG 4 cut(s) 1693, 1725, 2567, 2599
Asp700I GAANNNNTTC 2 cut(s) 669, 2286
AspLEI GCGC 1 cut(s) 1025
AspS9I GGNCC 1 cut(s) 2185
AsuHPI GGTGA 5 cut(s) 152, 980, 1869, 1961, 2062
AsuII TTCGAA 2 cut(s) 1611, 2573
AsuNHI GCTAGC 1 cut(s) 2171
AvaII GGWCC 1 cut(s) 2185
BaeGI GKGCMC 1 cut(s) 1484
BaeI ACNNNNGTAYC 2 cut(s) 1492, 1525
BalI TGGCCA 2 cut(s) 1456, 2399
BanII GRGCYC 1 cut(s) 381
BarI GAAGNNNNNNTAC 2 cut(s) 2460, 2492
BbsI GAAGAC 5 cut(s) 569, 1688, 2226, 2399, 2475
Bbv12I GWGCWC 2 cut(s) 381, 1484
BbvCI CCTCAGC 1 cut(s) 2010
BbvI GCAGC 1 cut(s) 351
BccI CCATC 6 cut(s) 339, 955, 1524, 1681, 1935, 2316
BceAI ACGGC 1 cut(s) 2566
BcgI CGANNNNNNTGC 4 cut(s) 1471, 1505, 1591, 1625
BciT130I CCWGG 3 cut(s) 461, 1402, 2559
BciVI GTATCC 3 cut(s) 1255, 1520, 1667
BclI TGATCA 1 cut(s) 1579
BcoDI GTCTC 9 cut(s) 281, 302, 505, 515, 713, 1431, 1725, 2336, 2464
BcuI ACTAGT 1 cut(s) 2075
BfaI CTAG 8 cut(s) 291, 638, 864, 1331, 1647, 2076, 2172, 2339
BfmI CTRYAG 3 cut(s) 597, 723, 1504
BfoI RGCGCY 1 cut(s) 1026
BfrI CTTAAG 1 cut(s) 1160
BfuAI ACCTGC 3 cut(s) 197, 454, 956
BfuI GTATCC 3 cut(s) 1255, 1520, 1667
BglI GCCNNNNNGGC 1 cut(s) 2396
BisI GCNGC 1 cut(s) 340
BlpI GCTNAGC 1 cut(s) 375
BlsI GCNGC 1 cut(s) 341
Bme1390I CCNGG 3 cut(s) 461, 1402, 2559
Bme18I GGWCC 1 cut(s) 2185
BmeRI GACNNNNNGTC 1 cut(s) 294
BmgBI CACGTC 1 cut(s) 1829
BmgT120I GGNCC 1 cut(s) 2185
BmrFI CCNGG 3 cut(s) 461, 1402, 2559
BmsI GCATC 6 cut(s) 133, 882, 1051, 1273, 2032, 2311
BmtI GCTAGC 1 cut(s) 2175
BoxI GACNNNNGTC 1 cut(s) 2190
BpiI GAAGAC 5 cut(s) 569, 1688, 2226, 2399, 2475
BpmI CTGGAG 3 cut(s) 964, 1145, 1423
Bpu10I CCTNAGC 1 cut(s) 2010
Bpu1102I GCTNAGC 1 cut(s) 375
Bpu14I TTCGAA 2 cut(s) 1611, 2573
BpuEI CTTGAG 2 cut(s) 92, 1936
Bsa29I ATCGAT 1 cut(s) 1939
BsaBI GATNNNNATC 1 cut(s) 1578
BsaHI GRCGYC 1 cut(s) 1072
BsaI GGTCTC 2 cut(s) 515, 1725
BsaJI CCNNGG 3 cut(s) 301, 830, 2188
BsaWI WCCGGW 2 cut(s) 1392, 1522
BsaXI ACNNNNNCTCC 2 cut(s) 2142, 2172
Bsc4I CCNNNNNNNGG 2 cut(s) 1522, 2544
Bse118I RCCGGY 1 cut(s) 997
Bse1I ACTGG 3 cut(s) 62, 947, 1302
Bse3DI GCAATG 2 cut(s) 1286, 2182
Bse8I GATNNNNATC 1 cut(s) 1578
BseAI TCCGGA 1 cut(s) 1522
BseBI CCWGG 3 cut(s) 461, 1402, 2559
BseCI ATCGAT 1 cut(s) 1939
BseDI CCNNGG 3 cut(s) 301, 830, 2188
BseGI GGATG 9 cut(s) 228, 241, 793, 1153, 1288, 1579, 1623, 2049, 2140
BseJI GATNNNNATC 1 cut(s) 1578
BseLI CCNNNNNNNGG 2 cut(s) 1522, 2544
BseMI GCAATG 2 cut(s) 1286, 2182
BseMII CTCAG 6 cut(s) 366, 500, 510, 708, 2024, 2406
BseNI ACTGG 3 cut(s) 62, 947, 1302
BseRI GAGGAG 3 cut(s) 443, 1169, 2434
BseSI GKGCMC 1 cut(s) 1484
BseXI GCAGC 1 cut(s) 351
BseYI CCCAGC 1 cut(s) 1598
BsgI GTGCAG 2 cut(s) 457, 2642
BshFI GGCC 4 cut(s) 464, 1456, 2399, 2581
BshVI ATCGAT 1 cut(s) 1939
BsiHKAI GWGCWC 2 cut(s) 381, 1484
BsiSI CCGG 3 cut(s) 998, 1393, 1523
BslFI GGGAC 2 cut(s) 837, 2251
BslI CCNNNNNNNGG 2 cut(s) 1522, 2544
BsmAI GTCTC 9 cut(s) 281, 302, 505, 515, 713, 1431, 1725, 2336, 2464
BsmBI CGTCTC 2 cut(s) 1431, 2464
BsmFI GGGAC 2 cut(s) 837, 2251
BsmI GAATGC 4 cut(s) 1368, 1541, 2326, 2566
BsnI GGCC 4 cut(s) 464, 1456, 2399, 2581
Bso31I GGTCTC 2 cut(s) 515, 1725
Bsp119I TTCGAA 2 cut(s) 1611, 2573
Bsp1286I GDGCHC 2 cut(s) 381, 1484
Bsp13I TCCGGA 1 cut(s) 1522
Bsp1407I TGTACA 2 cut(s) 1472, 2476
Bsp143I GATC 7 cut(s) 347, 1369, 1408, 1488, 1579, 1714, 1784
Bsp1720I GCTNAGC 1 cut(s) 375
Bsp19I CCATGG 1 cut(s) 301
BspACI CCGC 3 cut(s) 163, 987, 2633
BspANI GGCC 4 cut(s) 464, 1456, 2399, 2581
BspCNI CTCAG 6 cut(s) 367, 501, 511, 709, 2023, 2405
BspDI ATCGAT 1 cut(s) 1939
BspEI TCCGGA 1 cut(s) 1522
BspHI TCATGA 2 cut(s) 498, 1378
BspMAI CTGCAG 1 cut(s) 1508
BspMI ACCTGC 3 cut(s) 197, 454, 956
BspOI GCTAGC 1 cut(s) 2175
BspPI GGATC 3 cut(s) 355, 1722, 1779
BspQI GCTCTTC 2 cut(s) 727, 1986
BspT104I TTCGAA 2 cut(s) 1611, 2573
BspTI CTTAAG 1 cut(s) 1160
BspTNI GGTCTC 2 cut(s) 515, 1725
BsrDI GCAATG 2 cut(s) 1286, 2182
BsrFI RCCGGY 1 cut(s) 997
BsrGI TGTACA 2 cut(s) 1472, 2476
BsrI ACTGG 3 cut(s) 62, 947, 1302
BssAI RCCGGY 1 cut(s) 997
BssECI CCNNGG 3 cut(s) 301, 830, 2188
BssMI GATC 7 cut(s) 347, 1369, 1408, 1488, 1579, 1714, 1784
BssNAI GTATAC 2 cut(s) 443, 1114
BssNI GRCGYC 1 cut(s) 1072
BssT1I CCWWGG 2 cut(s) 301, 2188
Bst1107I GTATAC 2 cut(s) 443, 1114
Bst2UI CCWGG 3 cut(s) 461, 1402, 2559
Bst4CI ACNGT 5 cut(s) 55, 545, 1015, 2369, 2474
Bst6I CTCTTC 2 cut(s) 727, 1986
BstACI GRCGYC 1 cut(s) 1072
BstAFI CTTAAG 1 cut(s) 1160
BstAPI GCANNNNNTGC 1 cut(s) 1283
BstAUI TGTACA 2 cut(s) 1472, 2476
BstBI TTCGAA 2 cut(s) 1611, 2573
BstC8I GCNNGC 5 cut(s) 282, 594, 995, 1021, 2173
BstDSI CCRYGG 2 cut(s) 301, 830
BstF5I GGATG 9 cut(s) 228, 241, 793, 1153, 1288, 1579, 1623, 2049, 2140
BstH2I RGCGCY 1 cut(s) 1026
BstHHI GCGC 1 cut(s) 1025
BstKTI GATC 7 cut(s) 350, 1372, 1411, 1491, 1582, 1717, 1787
BstMAI GTCTC 9 cut(s) 281, 302, 505, 515, 713, 1431, 1725, 2336, 2464
BstMBI GATC 7 cut(s) 347, 1369, 1408, 1488, 1579, 1714, 1784
BstMWI GCNNNNNNNGC 4 cut(s) 336, 1283, 2147, 2396
BstNI CCWGG 3 cut(s) 461, 1402, 2559
BstNSI RCATGY 2 cut(s) 284, 1052
BstPAI GACNNNNGTC 1 cut(s) 2190
BstSCI CCNGG 3 cut(s) 459, 1400, 2557
BstSFI CTRYAG 3 cut(s) 597, 723, 1504
BstSLI GKGCMC 1 cut(s) 1484
BstV1I GCAGC 1 cut(s) 351
BstV2I GAAGAC 5 cut(s) 569, 1688, 2226, 2399, 2475
BstX2I RGATCY 1 cut(s) 1784
BstXI CCANNNNNNTGG 2 cut(s) 1813, 2441
BstYI RGATCY 1 cut(s) 1784
BstZ17I GTATAC 2 cut(s) 443, 1114
Bsu15I ATCGAT 1 cut(s) 1939
BsuI GTATCC 3 cut(s) 1255, 1520, 1667
BsuRI GGCC 4 cut(s) 464, 1456, 2399, 2581
BsuTUI ATCGAT 1 cut(s) 1939
BtgI CCRYGG 2 cut(s) 301, 830
BtgZI GCGATG 1 cut(s) 320
BtrI CACGTC 1 cut(s) 1829
BtsCI GGATG 9 cut(s) 228, 241, 793, 1153, 1288, 1579, 1623, 2049, 2140
BtsI GCAGTG 1 cut(s) 2166
BtsIMutI CAGTG 3 cut(s) 1295, 2166, 2400
BveI ACCTGC 3 cut(s) 197, 454, 956
Cac8I GCNNGC 5 cut(s) 282, 594, 995, 1021, 2173
CciI TCATGA 2 cut(s) 498, 1378
CfoI GCGC 1 cut(s) 1025
Cfr10I RCCGGY 1 cut(s) 997
Cfr13I GGNCC 1 cut(s) 2185
ClaI ATCGAT 1 cut(s) 1939
CseI GACGC 1 cut(s) 1080
Csp6I GTAC 7 cut(s) 541, 635, 1041, 1473, 2227, 2477, 2613
CviQI GTAC 7 cut(s) 541, 635, 1041, 1473, 2227, 2477, 2613
DpnI GATC 7 cut(s) 349, 1371, 1410, 1490, 1581, 1716, 1786
DpnII GATC 7 cut(s) 347, 1369, 1408, 1488, 1579, 1714, 1784
DraI TTTAAA 2 cut(s) 927, 1423
DraIII CACNNNGTG 1 cut(s) 76
DriI GACNNNNNGTC 1 cut(s) 294
EaeI YGGCCR 3 cut(s) 1454, 2397, 2579
Eam1104I CTCTTC 2 cut(s) 727, 1986
Eam1105I GACNNNNNGTC 1 cut(s) 294
EarI CTCTTC 2 cut(s) 727, 1986
Ecl136II GAGCTC 1 cut(s) 379
Eco130I CCWWGG 2 cut(s) 301, 2188
Eco147I AGGCCT 1 cut(s) 464
Eco24I GRGCYC 1 cut(s) 381
Eco31I GGTCTC 2 cut(s) 515, 1725
Eco47I GGWCC 1 cut(s) 2185
Eco53kI GAGCTC 1 cut(s) 379
Eco57I CTGAAG 4 cut(s) 1049, 1682, 2238, 2301
EcoICRI GAGCTC 1 cut(s) 379
EcoRI GAATTC 1 cut(s) 1185
EcoRII CCWGG 3 cut(s) 459, 1400, 2557
EcoT14I CCWWGG 2 cut(s) 301, 2188
EcoT22I ATGCAT 3 cut(s) 897, 1288, 1368
EcoT38I GRGCYC 1 cut(s) 381
ErhI CCWWGG 2 cut(s) 301, 2188
Esp3I CGTCTC 2 cut(s) 1431, 2464
FaqI GGGAC 2 cut(s) 837, 2251
FauNDI CATATG 1 cut(s) 2515
FbaI TGATCA 1 cut(s) 1579
FblI GTMKAC 2 cut(s) 442, 1113
Fnu4HI GCNGC 1 cut(s) 340
FokI GGATG 9 cut(s) 235, 248, 800, 1160, 1295, 1586, 1630, 2036, 2147
FriOI GRGCYC 1 cut(s) 381
Fsp4HI GCNGC 1 cut(s) 340
FspBI CTAG 8 cut(s) 291, 638, 864, 1331, 1647, 2076, 2172, 2339
GlaI GCGC 1 cut(s) 1024
GluI GCNGC 1 cut(s) 340
GsaI CCCAGC 1 cut(s) 1602
GsuI CTGGAG 3 cut(s) 964, 1145, 1423
HaeII RGCGCY 1 cut(s) 1026
HaeIII GGCC 4 cut(s) 464, 1456, 2399, 2581
HapII CCGG 3 cut(s) 998, 1393, 1523
HgaI GACGC 1 cut(s) 1080
HhaI GCGC 1 cut(s) 1025
Hin1I GRCGYC 1 cut(s) 1072
Hin6I GCGC 1 cut(s) 1023
HinP1I GCGC 1 cut(s) 1023
HincII GTYRAC 1 cut(s) 858
HindII GTYRAC 1 cut(s) 858
HindIII AAGCTT 2 cut(s) 323, 1527
HpaII CCGG 3 cut(s) 998, 1393, 1523
HphI GGTGA 5 cut(s) 152, 980, 1869, 1961, 2062
Hpy166II GTNNAC 8 cut(s) 443, 541, 858, 1114, 1390, 1482, 2070, 2477
Hpy188I TCNGA 6 cut(s) 520, 1631, 1701, 2162, 2292, 2427
Hpy8I GTNNAC 8 cut(s) 443, 541, 858, 1114, 1390, 1482, 2070, 2477
Hpy99I CGWCG 1 cut(s) 1074
HpyAV CCTTC 5 cut(s) 1607, 1946, 2063, 2276, 2689
HpyCH4III ACNGT 5 cut(s) 55, 545, 1015, 2369, 2474
HpyCH4IV ACGT 6 cut(s) 611, 624, 1257, 1416, 1828, 2430
HpyF10VI GCNNNNNNNGC 4 cut(s) 336, 1283, 2147, 2396
HpySE526I ACGT 6 cut(s) 611, 624, 1257, 1416, 1828, 2430
Hsp92I GRCGYC 1 cut(s) 1072
HspAI GCGC 1 cut(s) 1023
Kpn2I TCCGGA 1 cut(s) 1522
Ksp22I TGATCA 1 cut(s) 1579
Kzo9I GATC 7 cut(s) 347, 1369, 1408, 1488, 1579, 1714, 1784
LguI GCTCTTC 2 cut(s) 727, 1986
LmnI GCTCC 3 cut(s) 713, 1156, 2163
Lsp1109I GCAGC 1 cut(s) 351
LweI GCATC 6 cut(s) 133, 882, 1051, 1273, 2032, 2311
MaeI CTAG 8 cut(s) 291, 638, 864, 1331, 1647, 2076, 2172, 2339
MaeII ACGT 6 cut(s) 611, 624, 1257, 1416, 1828, 2430
MaeIII GTNAC 4 cut(s) 1009, 1196, 2363, 2583
MalI GATC 7 cut(s) 349, 1371, 1410, 1490, 1581, 1716, 1786
MboI GATC 7 cut(s) 347, 1369, 1408, 1488, 1579, 1714, 1784
MfeI CAATTG 4 cut(s) 841, 1142, 1820, 2414
MflI RGATCY 1 cut(s) 1784
MhlI GDGCHC 2 cut(s) 381, 1484
MlsI TGGCCA 2 cut(s) 1456, 2399
MluNI TGGCCA 2 cut(s) 1456, 2399
MlyI GAGTC 4 cut(s) 130, 1965, 2157, 2431
MmeI TCCRAC 4 cut(s) 13, 1617, 1821, 2185
Mox20I TGGCCA 2 cut(s) 1456, 2399
Mph1103I ATGCAT 3 cut(s) 897, 1288, 1368
MroI TCCGGA 1 cut(s) 1522
MroXI GAANNNNTTC 2 cut(s) 669, 2286
MscI TGGCCA 2 cut(s) 1456, 2399
Msp20I TGGCCA 2 cut(s) 1456, 2399
MspCI CTTAAG 1 cut(s) 1160
MspI CCGG 3 cut(s) 998, 1393, 1523
MspR9I CCNGG 3 cut(s) 461, 1402, 2559
MunI CAATTG 4 cut(s) 841, 1142, 1820, 2414
Mva1269I GAATGC 4 cut(s) 1368, 1541, 2326, 2566
MvaI CCWGG 3 cut(s) 461, 1402, 2559
MwoI GCNNNNNNNGC 4 cut(s) 336, 1283, 2147, 2396
NcoI CCATGG 1 cut(s) 301
NdeI CATATG 1 cut(s) 2515
NdeII GATC 7 cut(s) 347, 1369, 1408, 1488, 1579, 1714, 1784
NheI GCTAGC 1 cut(s) 2171
NmuCI GTSAC 2 cut(s) 2363, 2583
NsiI ATGCAT 3 cut(s) 897, 1288, 1368
NspI RCATGY 2 cut(s) 284, 1052
NspV TTCGAA 2 cut(s) 1611, 2573
PaeI GCATGC 1 cut(s) 284
PagI TCATGA 2 cut(s) 498, 1378
PaqCI CACCTGC 2 cut(s) 197, 956
PceI AGGCCT 1 cut(s) 464
PciSI GCTCTTC 2 cut(s) 727, 1986
PcsI WCGNNNNNNNCGW 2 cut(s) 748, 2579
PctI GAATGC 4 cut(s) 1368, 1541, 2326, 2566
PdmI GAANNNNTTC 2 cut(s) 669, 2286
PfeI GAWTC 6 cut(s) 470, 652, 1316, 2091, 2327, 2523
PfoI TCCNGGA 1 cut(s) 2557
PkrI GCNGC 1 cut(s) 341
PleI GAGTC 4 cut(s) 129, 1964, 2157, 2430
PpsI GAGTC 4 cut(s) 129, 1964, 2157, 2430
PshAI GACNNNNGTC 1 cut(s) 2190
Psp124BI GAGCTC 1 cut(s) 381
Psp1406I AACGTT 1 cut(s) 611
Psp6I CCWGG 3 cut(s) 459, 1400, 2557
PspFI CCCAGC 1 cut(s) 1598
PspGI CCWGG 3 cut(s) 459, 1400, 2557
PspPI GGNCC 1 cut(s) 2185
PstI CTGCAG 1 cut(s) 1508
PsuI RGATCY 1 cut(s) 1784
RsaI GTAC 7 cut(s) 542, 636, 1042, 1474, 2228, 2478, 2614
RsaNI GTAC 7 cut(s) 541, 635, 1041, 1473, 2227, 2477, 2613
SacI GAGCTC 1 cut(s) 381
SapI GCTCTTC 2 cut(s) 727, 1986
SatI GCNGC 1 cut(s) 340
Sau3AI GATC 7 cut(s) 347, 1369, 1408, 1488, 1579, 1714, 1784
Sau96I GGNCC 1 cut(s) 2185
SchI GAGTC 4 cut(s) 130, 1965, 2157, 2431
ScrFI CCNGG 3 cut(s) 461, 1402, 2559
SduI GDGCHC 2 cut(s) 381, 1484
SfaNI GCATC 6 cut(s) 133, 882, 1051, 1273, 2032, 2311
SfcI CTRYAG 3 cut(s) 597, 723, 1504
SfuI TTCGAA 2 cut(s) 1611, 2573
SinI GGWCC 1 cut(s) 2185
SmlI CTYRAG 3 cut(s) 107, 1160, 1915
SmoI CTYRAG 3 cut(s) 107, 1160, 1915
SpeI ACTAGT 1 cut(s) 2075
SphI GCATGC 1 cut(s) 284
SseBI AGGCCT 1 cut(s) 464
SsiI CCGC 3 cut(s) 163, 987, 2633
SspI AATATT 1 cut(s) 1083
SspMI CTAG 8 cut(s) 291, 638, 864, 1331, 1647, 2076, 2172, 2339
SstI GAGCTC 1 cut(s) 381
StuI AGGCCT 1 cut(s) 464
StyD4I CCNGG 3 cut(s) 459, 1400, 2557
StyI CCWWGG 2 cut(s) 301, 2188
TaaI ACNGT 5 cut(s) 55, 545, 1015, 2369, 2474
TaiI ACGT 6 cut(s) 614, 627, 1260, 1419, 1831, 2433
TaqI TCGA 5 cut(s) 618, 1611, 1866, 1939, 2573
TaqII GACCGA 1 cut(s) 539
TatI WGTACW 5 cut(s) 1040, 1472, 2226, 2476, 2612
TfiI GAWTC 6 cut(s) 470, 652, 1316, 2091, 2327, 2523
TscAI CASTG 3 cut(s) 1302, 2173, 2400
TseFI GTSAC 2 cut(s) 2363, 2583
TseI GCWGC 1 cut(s) 339
Tsp45I GTSAC 2 cut(s) 2363, 2583
TspGWI ACGGA 3 cut(s) 744, 1118, 2255
TspRI CASTG 3 cut(s) 1302, 2173, 2400
Vha464I CTTAAG 1 cut(s) 1160
VneI GTGCAC 1 cut(s) 1480
VpaK11BI GGWCC 1 cut(s) 2185
XapI RAATTY 5 cut(s) 669, 704, 1185, 1593, 1767
XbaI TCTAGA 2 cut(s) 863, 2338
XceI RCATGY 2 cut(s) 284, 1052
XcmI CCANNNNNNNNNTGG 1 cut(s) 2102
XmiI GTMKAC 2 cut(s) 442, 1113
XmnI GAANNNNTTC 2 cut(s) 669, 2286
XspI CTAG 8 cut(s) 291, 638, 864, 1331, 1647, 2076, 2172, 2339
Zsp2I ATGCAT 3 cut(s) 897, 1288, 1368
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.