Rmu_sc0010313.1_g000013

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0010313.1
Physical Location & Seq
Reverse (-)
32536 .. 36694
4159 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0010313.1_g000013.1.cds

Sequence Viewer

Length: 2619 bp
atggaagaaatagtatcaacagatgaatctgatgaaaagcatatgaataacatattctctaagctacaacatctgaagctagaagatcttccaatcctcacaagattctgctcaagaagttatagtggaattccatctttcgagatttcgcaactaaagaacaacaatgaaattgaagaaatggactcaagagaaaaccttgggaatgctttctttgacaaaaaggtattatttccaagcttgaagggattgttcatcaatggcttgaccaagttaataacattatggcacagtcaactttctccagagagtttcaaaaatctagagaccgtagacatttgctcatgtcagagtttgaaaagtgttttcccatccacaatagtcagacgtctgcagcagttaatgcatctgaaagtggtcaattgcggagtggaggaaatagttgcaaatgaagacggactacaaacaacacatgagtttgtgttctcaaaagtagaatctgttagatttgagggtttgccccatctgaggtgtttctgtcccagaatgcatgcttccaggtggccgtcgcttgaagatttgaaggtatttggttgttgtaaagtggcatttttagcccaggaatgttcaagctttgagagaaactatgagtcgacgaatcctactccaactagccaagctctctttctaattaagaaggattcattccccaacttgaaactagtccacatgcgggacatggagatttgggatggtccattcccagtaaagttctttagcaacctagaagatcttggagtcggtaatcaatactccaagttagccgtgcttgagaaattccttgatctcgaaaaacctagagtgacgagttttgctgcttccaatgaaatatctttccatgagaaaagccgtagtgcggatataaatgcagttggggccctcccgcatttaagtaagttgtggctttatggcatgtcgaagctgatgcatctaggggaagataatacccaatcaccaggccaaaattttcccaacttgaaagttctggtaatagagaactgtgacagcttaaagaatctaagatcatcagcgatatccttcaagaatctgacaaatttgaaagtaattaattgtccgggattggaatacttgataaattactccacagctaaaagtttcatgcaactcacatacctgagagttgaggactgtgcaggactggtagaaatagtgggtagcaaagaagacgatgatggttcaggtcatgagattgtattcagctgcttggaatatcttgaactttctaaactaccaagattgcgaggcttttgctctggagattgcattgtcagattcccatctttggaaactttatccatgagcaaacgcctcaaatggaagatttttcataatgatgaacatgtttcatcactgcagataacagacaaaaatgttgacacagacgttgatgctgatgatggcgaaacgataacagacaaaaatgttgacacagacgttgatgctgatgatggcgaaacggtaacaaaggacaaggtcgacacagatactggtgccggtggtgaacaaattgatgaaactacacagataacaaacaaaaacgaagacgcaaacattgatggatcggaacatgttcagccccttgagaccactgcgcctgatcagggggtcataacaccagtggaagaaaatctggccatcataccagtaggcgaagtcacaactcctgtgttcccagtcatcaagtctgctcctgtcaccgaagtacctcatactgaagaagttggggaacaagcattctcaggccagaacctagagcctctacctgaagaagtaaagcctgatgttcatcaaactcccaatgcacgagagcagcctgttgaggaacaaagtgatcccttggagccttcagctgctgctacaggaactccaacacctaccattcctgcactgcctcctccaagttctccgaagtcatctgggacgaaacaatccttgagagagaaacttcaagctctgtctgccaaaaaggctggtagcagttccagcttgcccgaggaggagaacgccaagctcaaagctcttattgctactgcggacttgaaagacccccacaccagacaacagctcttggcaatgctgcccactctccaactgtctgctaccaaatggattgctgatcttgctgttcaagagctatcgaagttaccactggttctggacaaggaggaatcattatgccaagaattggctgctcttaaagctcagggctccgagcttgatgtaaggagtcacatactcctctgtgaaggttccttagctgaagaaaacatccagaaggttcagcagcagaagatggtgctgctggctctggaagagcaaatcaagaagcttgaggcgcgagcatcttcaatccgggctgagatcacccttggcaaaaagaggtattctggttttgaagcgtccttggatcagctagttgaggaacagcaactcaaccaactctctgtggattcaacaagccaagagttgcttaggactcaagctgagagtgatagcttatgtatttccatcgtcacttatctccgccagctattgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

872

Amino Acids

96.92

Weight (kDa)

4.9

Isoelectric Point (pI)

47.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 391
AccB1I GGYRCC 1 cut(s) 1571
AccB7I CCANNNNNTGG 1 cut(s) 2266
AccI GTMKAC 3 cut(s) 333, 653, 1557
AccII CGCG 1 cut(s) 2419
AciI CCGC 6 cut(s) 426, 733, 917, 944, 2114, 2605
AclWI GGATC 3 cut(s) 1648, 1907, 2496
AcoI YGGCCR 2 cut(s) 563, 1713
AcsI RAATTY 4 cut(s) 129, 836, 1024, 1114
AcuI CTGAAG 5 cut(s) 95, 1815, 1866, 1911, 2361
AcyI GRCGYC 1 cut(s) 388
AfaI GTAC 1 cut(s) 1785
AfiI CCNNNNNNNGG 6 cut(s) 528, 733, 916, 1363, 1682, 2266
AflIII ACRYGT 2 cut(s) 1420, 1648
AhlI ACTAGT 1 cut(s) 721
AjnI CCWGG 3 cut(s) 557, 618, 1015
AjuI GAANNNNNNNTTGG 2 cut(s) 669, 701
Alw26I GTCTC 2 cut(s) 320, 1658
AlwI GGATC 3 cut(s) 1648, 1907, 2496
AlwNI CAGNNNCTG 2 cut(s) 1568, 1934
Ama87I CYCGRG 1 cut(s) 2072
AoxI GGCC 5 cut(s) 563, 936, 1018, 1713, 1822
ApaI GGGCCC 1 cut(s) 940
ApoI RAATTY 4 cut(s) 129, 836, 1024, 1114
AseI ATTAAT 1 cut(s) 1128
Asp700I GAANNNNTTC 3 cut(s) 87, 209, 1650
AspLEI GCGC 2 cut(s) 1675, 2419
AspS9I GGNCC 3 cut(s) 755, 936, 937
AsuC2I CCSGG 2 cut(s) 1137, 2435
AsuHPI GGTGA 4 cut(s) 1005, 1592, 1768, 2437
AvaI CYCGRG 1 cut(s) 2072
AvaII GGWCC 1 cut(s) 755
BaeGI GKGCMC 1 cut(s) 940
BaeI ACNNNNGTAYC 2 cut(s) 1767, 1800
BalI TGGCCA 1 cut(s) 1715
BanI GGYRCC 1 cut(s) 1571
BanII GRGCYC 2 cut(s) 940, 2291
BarI GAAGNNNNNNTAC 2 cut(s) 444, 476
BauI CACGAG 1 cut(s) 1884
BbsI GAAGAC 3 cut(s) 459, 1251, 1629
BceAI ACGGC 3 cut(s) 550, 809, 894
BcgI CGANNNNNNTGC 4 cut(s) 967, 1001, 1311, 1345
BciT130I CCWGG 3 cut(s) 559, 620, 1017
BclI TGATCA 1 cut(s) 1678
BcnI CCSGG 2 cut(s) 1137, 2435
BcoDI GTCTC 2 cut(s) 320, 1658
BcuI ACTAGT 1 cut(s) 721
BfaI CTAG 9 cut(s) 80, 323, 672, 722, 785, 858, 992, 1832, 2495
BfmI CTRYAG 3 cut(s) 392, 1433, 1938
BglI GCCNNNNNGGC 1 cut(s) 2048
BglII AGATCT 2 cut(s) 85, 790
Bme1390I CCNGG 5 cut(s) 559, 620, 1017, 1137, 2435
Bme18I GGWCC 1 cut(s) 755
BmeT110I CYCGRG 1 cut(s) 2072
BmgT120I GGNCC 3 cut(s) 755, 936, 937
BmiI GGNNCC 6 cut(s) 937, 938, 1573, 1923, 2290, 2332
BmrFI CCNGG 5 cut(s) 559, 620, 1017, 1137, 2435
BmrI ACTGGG 2 cut(s) 758, 1748
BmsI GCATC 6 cut(s) 415, 975, 997, 1459, 1510, 2432
BmuI ACTGGG 2 cut(s) 758, 1748
BpiI GAAGAC 3 cut(s) 459, 1251, 1629
BpmI CTGGAG 2 cut(s) 288, 1356
Bpu10I CCTNAGC 3 cut(s) 2283, 2335, 2552
BpuEI CTTGAG 7 cut(s) 97, 172, 851, 1682, 2035, 2432, 2544
BpuMI CCSGG 2 cut(s) 1137, 2435
BsaBI GATNNNNATC 2 cut(s) 1357, 1866
BsaHI GRCGYC 1 cut(s) 388
BsaI GGTCTC 2 cut(s) 320, 1658
BsaJI CCNNGG 6 cut(s) 199, 618, 1917, 2073, 2449, 2484
BsaXI ACNNNNNCTCC 2 cut(s) 1930, 1960
Bsc4I CCNNNNNNNGG 6 cut(s) 528, 733, 916, 1363, 1682, 2266
Bse118I RCCGGY 1 cut(s) 1574
Bse1I ACTGG 7 cut(s) 764, 1224, 1573, 1697, 1724, 1754, 2235
Bse3DI GCAATG 1 cut(s) 2160
Bse8I GATNNNNATC 2 cut(s) 1357, 1866
BseBI CCWGG 3 cut(s) 559, 620, 1017
BseDI CCNNGG 6 cut(s) 199, 618, 1917, 2073, 2449, 2484
BseGI GGATG 3 cut(s) 371, 757, 2349
BseJI GATNNNNATC 2 cut(s) 1357, 1866
BseLI CCNNNNNNNGG 6 cut(s) 528, 733, 916, 1363, 1682, 2266
BseMI GCAATG 1 cut(s) 2160
BseMII CTCAG 6 cut(s) 518, 1187, 1833, 2297, 2430, 2556
BseNI ACTGG 7 cut(s) 764, 1224, 1573, 1697, 1724, 1754, 2235
BseRI GAGGAG 4 cut(s) 1965, 2090, 2093, 2309
BseSI GKGCMC 1 cut(s) 940
BsgI GTGCAG 2 cut(s) 1233, 1950
Bsh1236I CGCG 1 cut(s) 2419
BshFI GGCC 5 cut(s) 565, 938, 1020, 1715, 1824
BshNI GGYRCC 1 cut(s) 1571
BsiHKCI CYCGRG 1 cut(s) 2072
BsiSI CCGG 3 cut(s) 1136, 1575, 2434
BslFI GGGAC 3 cut(s) 525, 749, 2014
BslI CCNNNNNNNGG 6 cut(s) 528, 733, 916, 1363, 1682, 2266
BsmAI GTCTC 2 cut(s) 320, 1658
BsmFI GGGAC 3 cut(s) 525, 749, 2014
BsmI GAATGC 3 cut(s) 211, 552, 1814
BsnI GGCC 5 cut(s) 565, 938, 1020, 1715, 1824
Bso31I GGTCTC 2 cut(s) 320, 1658
BsoBI CYCGRG 1 cut(s) 2072
Bsp120I GGGCCC 1 cut(s) 936
Bsp1286I GDGCHC 2 cut(s) 940, 2291
BspACI CCGC 6 cut(s) 426, 733, 917, 944, 2114, 2605
BspANI GGCC 5 cut(s) 565, 938, 1020, 1715, 1824
BspCNI CTCAG 6 cut(s) 519, 1188, 1832, 2296, 2431, 2557
BspFNI CGCG 1 cut(s) 2419
BspHI TCATGA 1 cut(s) 1264
BspLI GGNNCC 6 cut(s) 937, 938, 1573, 1923, 2290, 2332
BspMAI CTGCAG 2 cut(s) 396, 1437
BspPI GGATC 3 cut(s) 1648, 1907, 2496
BspQI GCTCTTC 1 cut(s) 2388
BspT107I GGYRCC 1 cut(s) 1571
BspTNI GGTCTC 2 cut(s) 320, 1658
BsrDI GCAATG 1 cut(s) 2160
BsrFI RCCGGY 1 cut(s) 1574
BsrI ACTGG 7 cut(s) 764, 1224, 1573, 1697, 1724, 1754, 2235
BssAI RCCGGY 1 cut(s) 1574
BssECI CCNNGG 6 cut(s) 199, 618, 1917, 2073, 2449, 2484
BssNI GRCGYC 1 cut(s) 388
BssSI CACGAG 1 cut(s) 1884
BssT1I CCWWGG 4 cut(s) 199, 1917, 2449, 2484
Bst2BI CACGAG 1 cut(s) 1884
Bst2UI CCWGG 3 cut(s) 559, 620, 1017
Bst4CI ACNGT 6 cut(s) 293, 331, 1061, 1211, 1540, 2175
Bst6I CTCTTC 1 cut(s) 2388
BstACI GRCGYC 1 cut(s) 388
BstAPI GCANNNNNTGC 1 cut(s) 403
BstC8I GCNNGC 5 cut(s) 552, 2069, 2385, 2421, 2609
BstF5I GGATG 3 cut(s) 371, 757, 2349
BstFNI CGCG 1 cut(s) 2419
BstHHI GCGC 2 cut(s) 1675, 2419
BstMAI GTCTC 2 cut(s) 320, 1658
BstNI CCWGG 3 cut(s) 559, 620, 1017
BstNSI RCATGY 5 cut(s) 554, 733, 976, 1424, 1652
BstSCI CCNGG 5 cut(s) 557, 618, 1015, 1135, 2433
BstSFI CTRYAG 3 cut(s) 392, 1433, 1938
BstSLI GKGCMC 1 cut(s) 940
BstUI CGCG 1 cut(s) 2419
BstV2I GAAGAC 3 cut(s) 459, 1251, 1629
BstX2I RGATCY 2 cut(s) 85, 790
BstYI RGATCY 2 cut(s) 85, 790
BsuRI GGCC 5 cut(s) 565, 938, 1020, 1715, 1824
BtsCI GGATG 3 cut(s) 371, 757, 2349
BtsI GCAGTG 3 cut(s) 1430, 1668, 1967
BtsIMutI CAGTG 5 cut(s) 1430, 1668, 1704, 1967, 2228
Cac8I GCNNGC 5 cut(s) 552, 2069, 2385, 2421, 2609
CaiI CAGNNNCTG 2 cut(s) 1568, 1934
CciI TCATGA 1 cut(s) 1264
CfoI GCGC 2 cut(s) 1675, 2419
Cfr10I RCCGGY 1 cut(s) 1574
Cfr13I GGNCC 3 cut(s) 755, 936, 937
CseI GACGC 2 cut(s) 1634, 2469
Csp6I GTAC 1 cut(s) 1784
CviQI GTAC 1 cut(s) 1784
EaeI YGGCCR 2 cut(s) 563, 1713
Eam1104I CTCTTC 1 cut(s) 2388
EarI CTCTTC 1 cut(s) 2388
EciI GGCGGA 1 cut(s) 2594
Eco130I CCWWGG 4 cut(s) 199, 1917, 2449, 2484
Eco24I GRGCYC 2 cut(s) 940, 2291
Eco31I GGTCTC 2 cut(s) 320, 1658
Eco32I GATATC 1 cut(s) 1095
Eco47I GGWCC 1 cut(s) 755
Eco57I CTGAAG 5 cut(s) 95, 1815, 1866, 1911, 2361
Eco88I CYCGRG 1 cut(s) 2072
EcoO109I RGGNCCY 2 cut(s) 936, 937
EcoRI GAATTC 1 cut(s) 129
EcoRII CCWGG 3 cut(s) 557, 618, 1015
EcoRV GATATC 1 cut(s) 1095
EcoT14I CCWWGG 4 cut(s) 199, 1917, 2449, 2484
EcoT22I ATGCAT 3 cut(s) 408, 552, 990
EcoT38I GRGCYC 2 cut(s) 940, 2291
ErhI CCWWGG 4 cut(s) 199, 1917, 2449, 2484
FalI AAGNNNNNCTT 2 cut(s) 2535, 2567
FaqI GGGAC 3 cut(s) 525, 749, 2014
FauI CCCGC 2 cut(s) 726, 951
FauNDI CATATG 1 cut(s) 42
FbaI TGATCA 1 cut(s) 1678
FblI GTMKAC 3 cut(s) 333, 653, 1557
FokI GGATG 3 cut(s) 358, 764, 2336
FriOI GRGCYC 2 cut(s) 940, 2291
FspBI CTAG 9 cut(s) 80, 323, 672, 722, 785, 858, 992, 1832, 2495
GlaI GCGC 2 cut(s) 1674, 2418
GsuI CTGGAG 2 cut(s) 288, 1356
HaeIII GGCC 5 cut(s) 565, 938, 1020, 1715, 1824
HapII CCGG 3 cut(s) 1136, 1575, 2434
HgaI GACGC 2 cut(s) 1634, 2469
HhaI GCGC 2 cut(s) 1675, 2419
Hin1I GRCGYC 1 cut(s) 388
Hin6I GCGC 2 cut(s) 1673, 2417
HinP1I GCGC 2 cut(s) 1673, 2417
HincII GTYRAC 5 cut(s) 296, 654, 1456, 1507, 1558
HindII GTYRAC 5 cut(s) 296, 654, 1456, 1507, 1558
HindIII AAGCTT 3 cut(s) 238, 631, 2408
HpaII CCGG 3 cut(s) 1136, 1575, 2434
HphI GGTGA 4 cut(s) 1005, 1592, 1768, 2437
Hpy166II GTNNAC 8 cut(s) 296, 334, 654, 727, 1456, 1507, 1558, 1583
Hpy8I GTNNAC 8 cut(s) 296, 334, 654, 727, 1456, 1507, 1558, 1583
Hpy99I CGWCG 2 cut(s) 571, 658
HpyAV CCTTC 7 cut(s) 238, 577, 691, 1108, 1935, 2321, 2350
HpyCH4III ACNGT 6 cut(s) 293, 331, 1061, 1211, 1540, 2175
HpyCH4IV ACGT 3 cut(s) 388, 1464, 1515
HpySE526I ACGT 3 cut(s) 388, 1464, 1515
Hsp92I GRCGYC 1 cut(s) 388
HspAI GCGC 2 cut(s) 1673, 2417
Ksp22I TGATCA 1 cut(s) 1678
LguI GCTCTTC 1 cut(s) 2388
LmnI GCTCC 3 cut(s) 1774, 1921, 2294
LweI GCATC 6 cut(s) 415, 975, 997, 1459, 1510, 2432
MaeI CTAG 9 cut(s) 80, 323, 672, 722, 785, 858, 992, 1832, 2495
MaeII ACGT 3 cut(s) 388, 1464, 1515
MaeIII GTNAC 8 cut(s) 862, 1061, 1540, 1735, 1774, 2223, 2309, 2593
MfeI CAATTG 1 cut(s) 421
MflI RGATCY 2 cut(s) 85, 790
MhlI GDGCHC 2 cut(s) 940, 2291
MlsI TGGCCA 1 cut(s) 1715
MluNI TGGCCA 1 cut(s) 1715
MlyI GAGTC 5 cut(s) 179, 659, 807, 2317, 2551
MmeI TCCRAC 3 cut(s) 692, 1973, 2194
Mox20I TGGCCA 1 cut(s) 1715
Mph1103I ATGCAT 3 cut(s) 408, 552, 990
MroXI GAANNNNTTC 3 cut(s) 87, 209, 1650
MscI TGGCCA 1 cut(s) 1715
MseI TTAA 7 cut(s) 275, 401, 693, 950, 1070, 1128, 2277
MslI CAYNNNNRTG 1 cut(s) 1413
Msp20I TGGCCA 1 cut(s) 1715
MspA1I CMGCKG 2 cut(s) 1281, 1931
MspI CCGG 3 cut(s) 1136, 1575, 2434
MspR9I CCNGG 5 cut(s) 559, 620, 1017, 1137, 2435
MunI CAATTG 1 cut(s) 421
Mva1269I GAATGC 3 cut(s) 211, 552, 1814
MvaI CCWGG 3 cut(s) 559, 620, 1017
MvnI CGCG 1 cut(s) 2419
NciI CCSGG 2 cut(s) 1137, 2435
NdeI CATATG 1 cut(s) 42
NlaIV GGNNCC 6 cut(s) 937, 938, 1573, 1923, 2290, 2332
NmuCI GTSAC 6 cut(s) 862, 1061, 1735, 1774, 2309, 2593
NsiI ATGCAT 3 cut(s) 408, 552, 990
NspI RCATGY 5 cut(s) 554, 733, 976, 1424, 1652
PaeI GCATGC 1 cut(s) 554
PagI TCATGA 1 cut(s) 1264
PciI ACATGT 2 cut(s) 1420, 1648
PciSI GCTCTTC 1 cut(s) 2388
PctI GAATGC 3 cut(s) 211, 552, 1814
PdmI GAANNNNTTC 3 cut(s) 87, 209, 1650
PflFI GACNNNGTC 1 cut(s) 1553
PflMI CCANNNNNTGG 1 cut(s) 2266
PfoI TCCNGGA 1 cut(s) 1135
PleI GAGTC 5 cut(s) 179, 658, 806, 2316, 2551
PpsI GAGTC 5 cut(s) 179, 658, 806, 2316, 2551
PscI ACATGT 2 cut(s) 1420, 1648
PshBI ATTAAT 1 cut(s) 1128
Psp6I CCWGG 3 cut(s) 557, 618, 1015
PspGI CCWGG 3 cut(s) 557, 618, 1015
PspN4I GGNNCC 6 cut(s) 937, 938, 1573, 1923, 2290, 2332
PspOMI GGGCCC 1 cut(s) 936
PspPI GGNCC 3 cut(s) 755, 936, 937
PstI CTGCAG 2 cut(s) 396, 1437
PstNI CAGNNNCTG 2 cut(s) 1568, 1934
PsuI RGATCY 2 cut(s) 85, 790
PsyI GACNNNGTC 1 cut(s) 1553
PvuII CAGCTG 2 cut(s) 1281, 1931
RsaI GTAC 1 cut(s) 1785
RsaNI GTAC 1 cut(s) 1784
RseI CAYNNNNRTG 1 cut(s) 1413
SalI GTCGAC 2 cut(s) 652, 1556
SapI GCTCTTC 1 cut(s) 2388
SaqAI TTAA 7 cut(s) 275, 401, 693, 950, 1070, 1128, 2277
Sau96I GGNCC 3 cut(s) 755, 936, 937
SchI GAGTC 5 cut(s) 179, 659, 807, 2317, 2551
ScrFI CCNGG 5 cut(s) 559, 620, 1017, 1137, 2435
SduI GDGCHC 2 cut(s) 940, 2291
SfaNI GCATC 6 cut(s) 415, 975, 997, 1459, 1510, 2432
SfcI CTRYAG 3 cut(s) 392, 1433, 1938
SinI GGWCC 1 cut(s) 755
SmiMI CAYNNNNRTG 1 cut(s) 1413
SmlI CTYRAG 7 cut(s) 112, 187, 830, 1661, 2014, 2411, 2559
SmoI CTYRAG 7 cut(s) 112, 187, 830, 1661, 2014, 2411, 2559
SpeI ACTAGT 1 cut(s) 721
SphI GCATGC 1 cut(s) 554
SsiI CCGC 6 cut(s) 426, 733, 917, 944, 2114, 2605
SspMI CTAG 9 cut(s) 80, 323, 672, 722, 785, 858, 992, 1832, 2495
StyD4I CCNGG 5 cut(s) 557, 618, 1015, 1135, 2433
StyI CCWWGG 4 cut(s) 199, 1917, 2449, 2484
TaaI ACNGT 6 cut(s) 293, 331, 1061, 1211, 1540, 2175
TaiI ACGT 3 cut(s) 391, 1467, 1518
TaqI TCGA 6 cut(s) 141, 653, 849, 977, 1557, 2219
Tru1I TTAA 7 cut(s) 275, 401, 693, 950, 1070, 1128, 2277
Tru9I TTAA 7 cut(s) 275, 401, 693, 950, 1070, 1128, 2277
TscAI CASTG 5 cut(s) 1437, 1675, 1704, 1974, 2235
TseFI GTSAC 6 cut(s) 862, 1061, 1735, 1774, 2309, 2593
Tsp45I GTSAC 6 cut(s) 862, 1061, 1735, 1774, 2309, 2593
TspGWI ACGGA 1 cut(s) 471
TspRI CASTG 5 cut(s) 1437, 1675, 1704, 1974, 2235
Tth111I GACNNNGTC 1 cut(s) 1553
Van91I CCANNNNNTGG 1 cut(s) 2266
VpaK11BI GGWCC 1 cut(s) 755
VspI ATTAAT 1 cut(s) 1128
XapI RAATTY 4 cut(s) 129, 836, 1024, 1114
XbaI TCTAGA 1 cut(s) 322
XceI RCATGY 5 cut(s) 554, 733, 976, 1424, 1652
XmiI GTMKAC 3 cut(s) 333, 653, 1557
XmnI GAANNNNTTC 3 cut(s) 87, 209, 1650
XspI CTAG 9 cut(s) 80, 323, 672, 722, 785, 858, 992, 1832, 2495
ZraI GACGTC 1 cut(s) 389
Zsp2I ATGCAT 3 cut(s) 408, 552, 990
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.